HHsearch alignment for GI: 254780502 and conserved domain: COG0209
>COG0209 NrdA Ribonucleotide reductase, alpha subunit [Nucleotide transport and metabolism].
Probab=100.00 E-value=0 Score=1183.21 Aligned_cols=629 Identities=41% Similarity=0.696 Sum_probs=573.1
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 89730378988899999999999987441-87714677999999999986210033310110446777547888998665
Q gi|254780502|r 184 ETYKNMYDGLSESDLETALIFSSRTLIEK-EPNYAKVTARFLLEKLRREVLTTVYKKPQKATHHEMQCLYPEYFCRYIEE 262 (954)
Q Consensus 184 ~~~~~lydgitt~el~~~li~aA~~Li~~-ePdy~~vAaRlll~~l~kev~~~~~~~~~~~~~~~~~~~y~~~f~~~i~~ 262 (954)
T Consensus 4 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~---------~~~~-~~~~~~~~~~ 70 (651)
T COG0209 4 RTVIGFYDGIT---IAENLILAALTVIEEDDPDVQRLAARLAGSDLRKEAVRQFGR---------FDVL-DEKVFALVAN 70 (651)
T ss_pred CCCCCCCCCHH---HHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCC---------CCCH-HHHHHHHHHH
T ss_conf 01343013327---987654312542365687702443288899999997500355---------3221-0107888750
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC--CEEECHHHHHHHHHHHHHCCCCC--CHHH
Q ss_conf 5767787777517739999976412101128989999999976211489--27538899999999654164545--3689
Q gi|254780502|r 263 GVKARLLHESMMDFDLVYLANDLKYERDFAFEYLGLQILYDRYFLHING--SRIEMPQAFFMRVAMGLALKETE--KEKR 338 (954)
Q Consensus 263 G~~~~~i~~~l~~~dl~~L~~~Id~~RD~~F~Y~Gl~tL~~rYllk~~~--~~~E~pQ~~~mrVA~~la~~e~~--~~~~ 338 (954)
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~l~~rYl~~~~~~~~~~E~~~~~~~~vA~~la~~e~~~~~~~~ 150 (651)
T COG0209 71 GYYDQRLLRLYSREDLDDLNKKILLERDRQFSYAAAKVLYSRYLLKDEDGSEILELPQDLFMRVALLLAQNEAPERRLEW 150 (651)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 21137888754444489998765402110010789999987550546666412248789999999985446653035689
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999743303586112221002222321102547664135899998999998510544410124431112000127
Q gi|254780502|r 339 AVEFYNLLSSFHFMCSTPTLFNSGTRHPQLSSCFLTTVPDDLYGIFGALQENAMLAKYSGGLGNDWTPVRGLGAHIHGTN 418 (954)
Q Consensus 339 ~~~~Y~~ls~~~~~~atPtl~Nagt~~~qlsSCfl~~v~Dsl~~I~~~~~~~a~isk~ggGiG~~~s~iR~~Gs~I~g~~ 418 (954)
T Consensus 151 a~~~y~~~~~~~~~patPtl~n~~~~~~qlssCfv~~~~dd~-------------------------------------- 192 (651)
T COG0209 151 AKEFYDLMSSLRFMPATPTLLNGGTPRGQLSSCFVLPVEDDS-------------------------------------- 192 (651)
T ss_pred HHHHHHHHHHCEECCCCCCEECCCCCCCCEEEEEEECCCCCC--------------------------------------
T ss_conf 999999997080527995155688777770046973533788--------------------------------------
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCHHHHHHCCCHHHCCCHHHHHHHHCCCC
Q ss_conf 87642889999998999997404666772478983567889999730257873023320232020348799998521287
Q gi|254780502|r 419 GKSQGVIPFLKVANDTAVAVNQGGKRKGAVCAYLETWHIDVEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVTQNAG 498 (954)
Q Consensus 419 G~ssG~v~flk~~n~~~~~v~QgG~RrGA~~~~l~~wH~Di~eFl~~k~n~G~~~~r~~~~~~av~i~D~Fm~~v~~~~~ 498 (954)
T Consensus 193 ---sG~i~~~k~~d~~~~~i~QgG~R~GA~~v~L~~~HpDi~~fl~~k~~~gde~~r~~~~~~~~~i~d~~~~~~~~~~~ 269 (651)
T COG0209 193 ---SGVVPFMKLLDDAFDAINQGGVRRGAQAVYLDIWHPDIEEFLDAKRNNGDEILRAFDISVGVWIPDLFMKRAKEGED 269 (651)
T ss_pred ---CCEEEHHHHHHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCHHHHHHHHCCCC
T ss_conf ---67103999988887899862877772478730687479999998674446300144574532143889998645997
Q ss_pred EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCC-CCC
Q ss_conf 4787101144410013443789987787521048860577866889999999999882881278331120222124-667
Q gi|254780502|r 499 WTLFSPDEVSDLHDLYGKEFEIAYENYERQADRGEIKVFRKISAVALWRKMLTMLFETGHPWITFKDPCNIRSPQQ-HVG 577 (954)
Q Consensus 499 w~Lf~P~~~~~L~d~~g~~fe~~Y~~~e~~~~~~~~~~~k~i~A~~l~~~i~~~~~etG~P~i~f~D~~N~~~p~~-~~g 577 (954)
T Consensus 270 ~~l~~P~~~~~~~~~~~~~~~~-y~~~~~~----~~~~~~~v~Ar~l~~~i~~~~~esG~P~l~f~D~~N~~~~~~~~~g 344 (651)
T COG0209 270 WTLFSPRDGYEAPDVYGAEFEE-YAEYEAD----PGIRKKRIKARELFDKLAEAAFETGDPYLIFVDTLNRRNPNAEGGG 344 (651)
T ss_pred CCCCCCCCCCCCCCHHHHHHHH-HHHHHCC----CCCEEECCCHHHHHHHHHHHHHCCCCCEEEEHHHHCCCCCCCCCCC
T ss_conf 1241875322223100356677-8887416----5430101278999999998744038961676311035588745675
Q ss_pred EEEECCCCCCCCCCC-------CCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 034046752001366-------5443321112554068625434479888558999999997653112100018888864
Q gi|254780502|r 578 VVHSSNLCTEITLNS-------SSEETAVCNLGSINLLAHFANNQFDYDKLASTIRTAVRVLDNVIDINCHTIEKAKKSN 650 (954)
Q Consensus 578 ~I~~sNlC~Ei~l~~-------~~~e~~vCnL~SiNL~~~v~~~~~D~~~l~~~v~~avr~LDnVId~n~yp~~~~~~~~ 650 (954)
T Consensus 345 ~I~~sNlC~Ei~~~~~~~~~~~~~~~~~~CNL~siNl~~~~~~-~-~~--~~~~v~~~vr~Ld~vid~~~~p~~~~~~~n 420 (651)
T COG0209 345 AIRASNLCSEILQRTKPLSLEQPLGEDASCNLGSINLAKFVKY-G-DG--LAELVAVAVRALDNVIDLNPYPVPEAERAN 420 (651)
T ss_pred EEEECCCCHHHHCCCCCCCCCCCCCCEEEEECCCCCHHHHHHC-C-CC--HHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 3896464065430477631235666605875133008887624-6-23--334101135453666750468766788754
Q ss_pred HHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHCCH
Q ss_conf 43310002111188999972963233788999999999985779997898753117788766781213876244663005
Q gi|254780502|r 651 HTHRAIGLGLMGFQSALHLLHIPYASPEAVEIADESMEFISFHAISASVELAQERGAYSSFKGSLWDQGVFPIDSIGLLA 730 (954)
Q Consensus 651 ~~~R~iGlGv~Glad~L~~~gi~Y~S~ea~~~~~~i~e~i~~~a~~aS~~LAkErG~~~~f~gS~~~~G~~~~d~~~~~~ 730 (954)
T Consensus 421 ~~~R~iGlGvmgl~~~La~~~i~y~S~ea~~~~~~~~e~i~~~a~~aS~elA~e~G~~~~f~~s~~~~g~~~~~~~~~~- 499 (651)
T COG0209 421 AESRAIGLGVMGLADLLAQLGIPYGSEEALKFNDRLFEYIAYYALKASAELAKERGPYPYFEGSRWARGILPIDYPRLF- 499 (651)
T ss_pred HHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCCCCHHHC-
T ss_conf 4304401202038899985698758878999999999999999998748988542897431525242287544200110-
Q ss_pred HHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHEEEEECCCCCEEEECHHHHHHH
Q ss_conf 52253345402102728999999984120443011077436877838898847560120345326761366465899989
Q gi|254780502|r 731 EVRDELAMNRTSRLPWDELKKRVKTIGMRNSNCMAIAPTATIANICGVSQSIDPSYQNLYVKSNMSGDFTVVNSFLVNEL 810 (954)
Q Consensus 731 ~~~~~~~~~~~~~~dW~~Lr~~i~~~G~RNs~l~aiAPT~t~S~i~g~s~gIEP~~a~~y~r~~~~G~~~~vn~~l~~~l 810 (954)
T Consensus 500 ---------~~~-~~w~~l~~~v~~~G~rns~~~aiaPtgsiS~i~~~t~~IeP~~~~~~~r~~~~g~~~~~~~~l~~~~ 569 (651)
T COG0209 500 ---------GIT-EDWEKLREDIKKHGLRNSYLTAIAPTGSISYIAGTTSGIEPIFALVYFRETKGGRFYYVVPPLFEDL 569 (651)
T ss_pred ---------CCC-CHHHHHHHHHHHHHHHHHCEEEECCCCCEEEEECCCCCCEECHHHEEEEECCCCCEEEECCHHHHHH
T ss_conf ---------132-1189999999874244523167647884688706788620313033787504551388672677889
Q ss_pred HHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHCCCHHHHHHHHHHHCCHHCCCEEEEEEC-CCCCHHHHHHHH
Q ss_conf 9858986899999985199627764488678865052220688999999985206300523204754-899989999999
Q gi|254780502|r 811 KQRDLWDEAMISDLKYHDGSIGNIERIPDDLKKIHATAFEIDPMWLIESASRRQKWIDQAQSLNLYL-DEPSGKKLDFIY 889 (954)
Q Consensus 811 ~~~g~~~~~~~~~i~~~~Gsv~~i~~ip~~~k~~f~ta~ei~~~~~i~~~a~~Q~~IDqsiS~tl~~-~~~t~~~i~~~y 889 (954)
T Consensus 570 ~~-------------------------------~~~~a~~i~~~~~i~~~a~~q~~iDq~iS~tl~~~~~~~~~d~~~~~ 618 (651)
T COG0209 570 LA-------------------------------YYGLAYEIDPLWHIDMQAAAQRWIDQGISKTLNLPNTATTKDLNKAY 618 (651)
T ss_pred HH-------------------------------HHHHHHHCCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCHHHHHHHH
T ss_conf 98-------------------------------63567622843168877764063142312044358998889999999
Q ss_pred HHHHHCCCCEEEEECCCCCHHHHHHCCC
Q ss_conf 9999729867979658841111210124
Q gi|254780502|r 890 RQAWLMGLKTTYYLRSRSATSVEKSTLK 917 (954)
Q Consensus 890 ~~Aw~~GlKt~yy~R~~s~~~~ek~t~~ 917 (954)
T Consensus 619 ~~Aw~~g~K~~yY~~~~~~~~~~~~~~~ 646 (651)
T COG0209 619 LYAWKLGLKTTYYRRTSQAAQVLTVVLD 646 (651)
T ss_pred HHHHHCCCCEEEEECCCCCCCCCCCCCC
T ss_conf 9998728771899626211112256766