HHsearch alignment for GI: 254780502 and conserved domain: PRK00464

>PRK00464 nrdR transcriptional regulator NrdR; Validated.
Probab=97.40  E-value=0.0011  Score=46.27  Aligned_cols=72  Identities=21%  Similarity=0.238  Sum_probs=47.8

Q ss_pred             CCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             16469802897322486799999999998704877643210799999999999999985066789852114548999999
Q gi|254780502|r   27 KGVQVIKRNGGVTSFDPSKISRAIMKAFMAVEGKGASRSIRVQDIIKNLTEQTVTRLLQHNKSALIVHIEDIQDQVECSL  106 (954)
Q Consensus        27 ~~m~ViKRnG~vv~Fd~~KI~~AI~KAFlav~~~~~~~s~~~~~~v~~lt~~Vv~~i~~~~~~~~~~~VE~IQD~VE~~L  106 (954)
T Consensus        47 ~~l~VvKrdg~re~Fdr~Kl~~gi~~A~~K--Rpv~------~~~ie~~v~~Ie~~l~~~~~--~EI~S~~IGe~Vm~~L  116 (149)
T PRK00464         47 VPPLVIKKDGRREPFDREKLLRGLLRACEK--RPVS------SEQIEAAVSRIERQLRASGE--REVPSKEIGELVMEEL  116 (149)
T ss_pred             CCCEEEECCCCCCCCCHHHHHHHHHHHHCC--CCCC------HHHHHHHHHHHHHHHHHCCC--CCCCHHHHHHHHHHHH
T ss_conf             265799459987777799999999999638--9989------99999999999999998388--8755999999999988


Q ss_pred             HH
Q ss_conf             86
Q gi|254780502|r  107 MQ  108 (954)
Q Consensus       107 M~  108 (954)
T Consensus       117 k~  118 (149)
T PRK00464        117 KK  118 (149)
T ss_pred             HH
T ss_conf             62