HHsearch alignment for GI: 254780502 and conserved domain: PRK00464

>PRK00464 nrdR transcriptional regulator NrdR; Validated.
Probab=96.23  E-value=0.036  Score=34.97  Aligned_cols=76  Identities=17%  Similarity=0.257  Sum_probs=50.7

Q ss_pred             CCEEEEECCCCEECCCHHHHHHHHHHHHCCCCCCCHHH---HHHHHHHHC----CCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             42289805997602598999999999851666689999---999897303----78988899999999999987441877
Q gi|254780502|r  143 PKLKIMMDDGTLISFNSKRLEMIVEEACSGLQDVSSKI---VLSETYKNM----YDGLSESDLETALIFSSRTLIEKEPN  215 (954)
Q Consensus       143 ~~l~V~krDG~~e~~d~~ki~~~i~~ac~gL~~v~~~~---i~~~~~~~l----ydgitt~el~~~li~aA~~Li~~ePd  215 (954)
T Consensus        47 ~~l~VvKrdg~re~Fdr~Kl~~gi~~A~~KR-pv~~~~ie~~v~~Ie~~l~~~~~~EI~S~~IGe~Vm~~Lk~l--D~VA  123 (149)
T PRK00464         47 VPPLVIKKDGRREPFDREKLLRGLLRACEKR-PVSSEQIEAAVSRIERQLRASGEREVPSKEIGELVMEELKKL--DEVA  123 (149)
T ss_pred             CCCEEEECCCCCCCCCHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHC--CCEE
T ss_conf             2657994599877777999999999996389-989999999999999999983888755999999999988620--9310


Q ss_pred             HHHHHH
Q ss_conf             146779
Q gi|254780502|r  216 YAKVTA  221 (954)
Q Consensus       216 y~~vAa  221 (954)
T Consensus       124 YvRFAS  129 (149)
T PRK00464        124 YVRFAS  129 (149)
T ss_pred             EHHHHH
T ss_conf             000245