HHsearch alignment for GI: 254780502 and conserved domain: PRK06556
>PRK06556 vitamin B12-dependent ribonucleotide reductase; Validated.
Probab=100.00 E-value=0 Score=1158.06 Aligned_cols=542 Identities=23% Similarity=0.390 Sum_probs=483.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 45368999999999743303586112221002-22232110254766413589999899999851054441012443111
Q gi|254780502|r 333 TEKEKRAVEFYNLLSSFHFMCSTPTLFNSGTR-HPQLSSCFLTTVPDDLYGIFGALQENAMLAKYSGGLGNDWTPVRGLG 411 (954)
Q Consensus 333 ~~~~~~~~~~Y~~ls~~~~~~atPtl~Nagt~-~~qlsSCfl~~v~Dsl~~I~~~~~~~a~isk~ggGiG~~~s~iR~~G 411 (954)
T Consensus 121 ~d~~~f~~e~~~~l~~q~~a~nsp~wfn~g~~~~~Q~sACFv~~v~D~~~~I~d~~~~~a~ifK~G~GtG~nfS~lR~~~ 200 (957)
T PRK06556 121 ADAEIFEHELTWLLLHQKFSFNSPVWFNVGTSSRQQVSACFILSVDDSMESILDWYKEEGMLFKGGSGTGTNLSRIRSSK 200 (957)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCC
T ss_conf 78999999999999975527999802667888888741577723655699999999997762215784561501147789
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC-CCCCEEEEEECCCCCHHHHHHHCCCCCCHHHH---------------
Q ss_conf 20001278764288999999899999740466-67724789835678899997302578730233---------------
Q gi|254780502|r 412 AHIHGTNGKSQGVIPFLKVANDTAVAVNQGGK-RKGAVCAYLETWHIDVEEFLDLRKNTGDDRRR--------------- 475 (954)
Q Consensus 412 s~I~g~~G~ssG~v~flk~~n~~~~~v~QgG~-RrGA~~~~l~~wH~Di~eFl~~k~n~G~~~~r--------------- 475 (954)
T Consensus 201 ~~~-s~gG~aSGPvSFM~v~D~~~~~IksGG~tRRgA~M~il~vdHPDI~eFI~~K~~ee~-k~~~l~~~g~d~~~~~~~ 278 (957)
T PRK06556 201 ELL-SGGGTASGPVSFMRGADASAGTIKSGGATRRAAKMVILDVDHPDIEEFIECKAREED-KARALRDAGYDMDLGGEA 278 (957)
T ss_pred CCC-CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHCCCHH-HHHHHHHCCCCCCCCCCC
T ss_conf 856-899834762889999999877998488755544068872888519999987502425-566787615666767531
Q ss_pred -----HHCCCHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHH
Q ss_conf -----202320203487999985212874787101144410013443789987787521048860577866889999999
Q gi|254780502|r 476 -----THDMNTANWIPDLFMKRVTQNAGWTLFSPDEVSDLHDLYGKEFEIAYENYERQADRGEIKVFRKISAVALWRKML 550 (954)
Q Consensus 476 -----~~~~~~av~i~D~Fm~~v~~~~~w~Lf~P~~~~~L~d~~g~~fe~~Y~~~e~~~~~~~~~~~k~i~A~~l~~~i~ 550 (954)
T Consensus 279 ~~~v~~qNfN~SV~vtd~FM~Av~~d~~~~L~~~~~---------------------------g~v~~~v~Ar~L~~~I~ 331 (957)
T PRK06556 279 YASVQYQNANNSVRVSDEFMRAVEDDETFGLRARTD---------------------------GSVIETVDAKDLFRKIA 331 (957)
T ss_pred EEECCCCCCEEEEEECHHHHHHHHCCCCEEEEECCC---------------------------CCEEEEECHHHHHHHHH
T ss_conf 000041303236974799999986699626781478---------------------------96404874999999999
Q ss_pred HHHHHHCCCEEEEECHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC-CCCCCHHHHHHHHHHHH
Q ss_conf 99988288127833112022212466703404675200136654433211125540686254-34479888558999999
Q gi|254780502|r 551 TMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNSSSEETAVCNLGSINLLAHFA-NNQFDYDKLASTIRTAV 629 (954)
Q Consensus 551 ~~~~etG~P~i~f~D~~N~~~p~~~~g~I~~sNlC~Ei~l~~~~~e~~vCnL~SiNL~~~v~-~~~~D~~~l~~~v~~av 629 (954)
T Consensus 332 ~~AW~~gdPGv~F~D~iN~~n~~p~~g~I~aTNPCgE~~ll~~~a----CnLgSiNL~~f~~~d~~fD~e~~~~~v~~~~ 407 (957)
T PRK06556 332 EAAWECADPGMQYDDTINAWHTCPETGRINASNPCSEYMFLDNSS----CNLASLNLMKFLDPDGTFDVESFRHAVELVI 407 (957)
T ss_pred HHHHCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCC----HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHH
T ss_conf 998634896011423565358886668455157876737799961----1104415999857798387999999999999
Q ss_pred HHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99765311210001888886443310002111188999972963233788999999999985779997898753117788
Q gi|254780502|r 630 RVLDNVIDINCHTIEKAKKSNHTHRAIGLGLMGFQSALHLLHIPYASPEAVEIADESMEFISFHAISASVELAQERGAYS 709 (954)
Q Consensus 630 r~LDnVId~n~yp~~~~~~~~~~~R~iGlGv~Glad~L~~~gi~Y~S~ea~~~~~~i~e~i~~~a~~aS~~LAkErG~~~ 709 (954)
T Consensus 408 ~~LD~vId~~~fP~~~I~~~t~~~R~iGLG~~gla~lL~~lGipYdS~ea~~~a~~i~~~m~~~ay~~S~eLA~e~G~Fp 487 (957)
T PRK06556 408 TAMEISICFADFPTEKIGKNTRAFRQLGLGYANLGALLMASGLPYDSDGGRALAAAITSLMTGTAYRRSAELAGVVGPFD 487 (957)
T ss_pred HHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99997633512980999999983786364055299999976998699999999999999999999999999999649985
Q ss_pred CCCCCHHHCCCCCHHHHHCCHHHCC---CC--------CCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC
Q ss_conf 7667812138762446630055225---33--------454021027289999999841204430110774368778388
Q gi|254780502|r 710 SFKGSLWDQGVFPIDSIGLLAEVRD---EL--------AMNRTSRLPWDELKKRVKTIGMRNSNCMAIAPTATIANICGV 778 (954)
Q Consensus 710 ~f~gS~~~~G~~~~d~~~~~~~~~~---~~--------~~~~~~~~dW~~Lr~~i~~~G~RNs~l~aiAPT~t~S~i~g~ 778 (954)
T Consensus 488 ~~~~n~~~~-------l~v~r~h~~a~~~i~~~~~~~~~l~~~~~~~w~~~~~~g~~~G~RNa~~ttIAPTGTIsl~~dc 560 (957)
T PRK06556 488 GYARNAEPH-------LRVMRKHAAANDSINPVDDVDTPLLAAAKEAWDDALELGEKHGFRNAQVSVLAPTGTIGFMMDC 560 (957)
T ss_pred CHHHHHHHH-------HHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECC
T ss_conf 543426889-------9999988875313676333417899999887899886544305332203555588725676437
Q ss_pred -CCCCCCCCHHEEEEECC-CCCEEEECHHHHHHHHHCCCCCHHHHHHHH--HCCCCCCCCCCCCHHHHHHCCCHHC----
Q ss_conf -98847560120345326-761366465899989985898689999998--5199627764488678865052220----
Q gi|254780502|r 779 -SQSIDPSYQNLYVKSNM-SGDFTVVNSFLVNELKQRDLWDEAMISDLK--YHDGSIGNIERIPDDLKKIHATAFE---- 850 (954)
Q Consensus 779 -s~gIEP~~a~~y~r~~~-~G~~~~vn~~l~~~l~~~g~~~~~~~~~i~--~~~Gsv~~i~~ip~~~k~~f~ta~e---- 850 (954)
T Consensus 561 ~SsGIEP~FAlv~~kk~~ggg~~~ivn~~~~~~l~~lGy~~~~~~~i~~~i~~~G~i~~~p~l~~e~~~vF~tA~~~~~g 640 (957)
T PRK06556 561 DTTGIEPDLALVKYKKLVGGGSMKIVNQTVPLALKKLGYSEEQIEAIVEYIAEHGTIEGAPGLKPEHYAVFDCAFKPANG 640 (957)
T ss_pred CCCCCCCCCHHEEEEEECCCCEEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf 77775866023057885378538984377899999838977889999999986498478887777776565321012456
Q ss_pred ---CCHHHHHHHHHHHCCHHCCCEEEEEEC-CCCCHHHHHHHHHHHHHCCCCEEEEECCCCCH-HHHHH
Q ss_conf ---688999999985206300523204754-89998999999999997298679796588411-11210
Q gi|254780502|r 851 ---IDPMWLIESASRRQKWIDQAQSLNLYL-DEPSGKKLDFIYRQAWLMGLKTTYYLRSRSAT-SVEKS 914 (954)
Q Consensus 851 ---i~~~~~i~~~a~~Q~~IDqsiS~tl~~-~~~t~~~i~~~y~~Aw~~GlKt~yy~R~~s~~-~~ek~ 914 (954)
T Consensus 641 ~r~Isp~~HV~MqAA~Q~~id~AISKTVNlP~dATvEDv~~~Y~~AwklGlKgiTvYRDGSk~~QpL~~ 709 (957)
T PRK06556 641 ERSISPMGHVRMMAAVQPFISGAISKTVNMPEDATVEDIEEAYFESWKLGLKALAIYRDNCKVGQPLNT 709 (957)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCC
T ss_conf 666799999999999666612555051048887999999999999998489469985589845573104