HHsearch alignment for GI: 254780502 and conserved domain: PRK07088
>PRK07088 ribonucleotide-diphosphate reductase subunit alpha; Validated.
Probab=100.00 E-value=0 Score=1720.14 Aligned_cols=694 Identities=35% Similarity=0.587 Sum_probs=641.4
Q ss_pred HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC----CCCCHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 89999999998516666899999998973037----8988899999999999987441-877146779999999999862
Q gi|254780502|r 159 SKRLEMIVEEACSGLQDVSSKIVLSETYKNMY----DGLSESDLETALIFSSRTLIEK-EPNYAKVTARFLLEKLRREVL 233 (954)
Q Consensus 159 ~~ki~~~i~~ac~gL~~v~~~~i~~~~~~~ly----dgitt~el~~~li~aA~~Li~~-ePdy~~vAaRlll~~l~kev~ 233 (954)
T Consensus 1 ~~ki~~~v~~ac~gl~~v~~~~v~~~~~~~l~~~~~dgitt~ei~~~~i~~A~~~~~~~~P~y~~~AaRl~~~~l~k~~~ 80 (743)
T PRK07088 1 VEKTKKMCKLACEGIEDCDPLYTELKLRIQLDHIVRDGMTTKEIQKSLIQVALELTKKTEPNWQYVAARLYVFDLYKEVR 80 (743)
T ss_pred CHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 90699999999687757999999999999764056799869999999999999857867875799999999998999874
Q ss_pred HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC-CCCC
Q ss_conf 100333101104467775478889986655767787777517739999976412101128989999999976211-4892
Q gi|254780502|r 234 TTVYKKPQKATHHEMQCLYPEYFCRYIEEGVKARLLHESMMDFDLVYLANDLKYERDFAFEYLGLQILYDRYFLH-INGS 312 (954)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~y~~~f~~~i~~G~~~~~i~~~l~~~dl~~L~~~Id~~RD~~F~Y~Gl~tL~~rYllk-~~~~ 312 (954)
T Consensus 81 ~~~~~~~---~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~i~~~rD~~~~y~g~~~l~~~Yl~k~~~~~ 156 (743)
T PRK07088 81 INRNYNS---F-GNPYGDYYEFIKKLTEKGLYGEYILENYSKEDIKELEKYIKPERDFLFNYSGIKLLNDRYLVQGFNRE 156 (743)
T ss_pred CCCCCHH---H-HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCC
T ss_conf 0367211---0-04489999999998866732699999860999999985657055237781999999985572778998
Q ss_pred EEECHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 753889999999965416454--536899999999974330358611222100222232110254766413589999899
Q gi|254780502|r 313 RIEMPQAFFMRVAMGLALKET--EKEKRAVEFYNLLSSFHFMCSTPTLFNSGTRHPQLSSCFLTTVPDDLYGIFGALQEN 390 (954)
Q Consensus 313 ~~E~pQ~~~mrVA~~la~~e~--~~~~~~~~~Y~~ls~~~~~~atPtl~Nagt~~~qlsSCfl~~v~Dsl~~I~~~~~~~ 390 (954)
T Consensus 157 ~~E~PQ~~~mrvA~~l~~~e~~~~r~~~~~~~Y~~~s~~~~~~aTPtl~Nagt~~~qlsSCfl~~v~Dsl~~I~~~~~~~ 236 (743)
T PRK07088 157 ILELPQQMFMGIAMHLAIPEKKEKRVYWAKRFYDVLSSLKATMATPTMSNARKPFYQLSSCFIDVVGDSLWGIYKSLDNF 236 (743)
T ss_pred EEECHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHH
T ss_conf 83567999999999984437752268999999999972766689931102799888775068266898889999999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHCCCCC
Q ss_conf 99985105444101244311120001278764288999999899999740466677247898356788999973025787
Q gi|254780502|r 391 AMLAKYSGGLGNDWTPVRGLGAHIHGTNGKSQGVIPFLKVANDTAVAVNQGGKRKGAVCAYLETWHIDVEEFLDLRKNTG 470 (954)
Q Consensus 391 a~isk~ggGiG~~~s~iR~~Gs~I~g~~G~ssG~v~flk~~n~~~~~v~QgG~RrGA~~~~l~~wH~Di~eFl~~k~n~G 470 (954)
T Consensus 237 a~isk~gGGiG~~~s~iR~~Gs~I~g~~g~ssG~vpf~k~~~~~~~~v~QgG~R~GA~avyL~~wH~DI~~Fl~lK~n~G 316 (743)
T PRK07088 237 AKVSKHGGGMGIYMGKIRALGSEIRGFKGASGGVIPWIKLFNDTAIAVDQLGVRNGSVAIWLDAWHKDIPEFLQLKTNNG 316 (743)
T ss_pred HHHHHCCCEEEECCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHCCCCCC
T ss_conf 99883466433234445779982168888079841089999999999972898664158985687253999995044577
Q ss_pred CHHHHHHCCCHHHCCCHHHHHHHHCC--CCEEEEECCCCC-----CCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHH
Q ss_conf 30233202320203487999985212--874787101144-----41001344378998778752104886057786688
Q gi|254780502|r 471 DDRRRTHDMNTANWIPDLFMKRVTQN--AGWTLFSPDEVS-----DLHDLYGKEFEIAYENYERQADRGEIKVFRKISAV 543 (954)
Q Consensus 471 ~~~~r~~~~~~av~i~D~Fm~~v~~~--~~w~Lf~P~~~~-----~L~d~~g~~fe~~Y~~~e~~~~~~~~~~~k~i~A~ 543 (954)
T Consensus 317 de~~r~~~l~~~v~ipD~Fm~rv~~n~d~~w~Lf~P~~~~~~~g~~L~d~ygeef~~~Y~~~~~~~~~~----kk~V~Ar 392 (743)
T PRK07088 317 DDRKKAHDIFPGVCYPDLFWKLAENRIDENWSMMCPHEIKKVKGYSLEDYYGEEWEKKYLECVEDDRIP----KRTVSVK 392 (743)
T ss_pred CHHHHHHHCCCCCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCHHHHHCHHHHHHHHHHHHCCCCC----CEEECHH
T ss_conf 377776406303001799999998568876487676312233465425531459999999874257654----4125389
Q ss_pred HHHHHHHHHHHHHCCCEEEEECHHHCCCCCCCCCEEEECCCCCCCCCCCCCCC-----------------------CCCC
Q ss_conf 99999999998828812783311202221246670340467520013665443-----------------------3211
Q gi|254780502|r 544 ALWRKMLTMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNSSSEE-----------------------TAVC 600 (954)
Q Consensus 544 ~l~~~i~~~~~etG~P~i~f~D~~N~~~p~~~~g~I~~sNlC~Ei~l~~~~~e-----------------------~~vC 600 (954)
T Consensus 393 eL~~~I~~~~~eTG~Pyi~fkD~~Nr~~p~~~~G~I~sSNLCtEI~q~~s~~~~~~~~~~d~~g~~~~~~~~~~ge~~~C 472 (743)
T PRK07088 393 DIVRLIIKSAVETGTPFAFFRDTVNKANPNKHKGMIYSSNLCTEIMQNMSEMELLEEEIIDENGYYEVVQKIKAGDFVVC 472 (743)
T ss_pred HHHHHHHHHHHHHCCCEEEEECHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 99999999999868853676125443587546791685427601043577000244201355553100013677863887
Q ss_pred CHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHH
Q ss_conf 12554068625434479888558999999997653112100018888864433100021111889999729632337889
Q gi|254780502|r 601 NLGSINLLAHFANNQFDYDKLASTIRTAVRVLDNVIDINCHTIEKAKKSNHTHRAIGLGLMGFQSALHLLHIPYASPEAV 680 (954)
Q Consensus 601 nL~SiNL~~~v~~~~~D~~~l~~~v~~avr~LDnVId~n~yp~~~~~~~~~~~R~iGlGv~Glad~L~~~gi~Y~S~ea~ 680 (954)
T Consensus 473 nL~SinL~~~~~---~~~~~l~~~v~~avr~LDnVID~n~yP~~~~~~~n~~~R~IGLGvmGlad~l~~lgi~Y~S~eA~ 549 (743)
T PRK07088 473 NLSSIVLGNVDV---TKDEELEYVIETQIRAMDNVIDLNYYSVPFAEITNKKYRAIGLGTSGYHHMLANNKIRWESEEHI 549 (743)
T ss_pred EHHHHHHHCCCC---CCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHH
T ss_conf 526536440455---66477999999999999998603457749999999873057852779999999835531799999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHCCHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHH
Q ss_conf 99999999985779997898753117788766781213876244663005522533454021027289999999841204
Q gi|254780502|r 681 EIADESMEFISFHAISASVELAQERGAYSSFKGSLWDQGVFPIDSIGLLAEVRDELAMNRTSRLPWDELKKRVKTIGMRN 760 (954)
Q Consensus 681 ~~~~~i~e~i~~~a~~aS~~LAkErG~~~~f~gS~~~~G~~~~d~~~~~~~~~~~~~~~~~~~~dW~~Lr~~i~~~G~RN 760 (954)
T Consensus 550 ~l~~~i~e~i~~~a~~AS~eLAkErG~~~~f~gS~~~~G~~-~~~~~-------------~~~~~W~~Lr~~i~k~G~RN 615 (743)
T PRK07088 550 KFVDKVYEEINYYAIKASMNLAKEKGSYPLFEGSDWETGKY-FELRG-------------YNSERWKKLKEEIKKYGMRN 615 (743)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCC-CCCCC-------------CCHHHHHHHHHHHHHHCCCH
T ss_conf 99999999999999999999999859898888982001872-14467-------------76462999999999838054
Q ss_pred HHHCCCCCCHHHHHHHCCCCCCCCCCHHEEEEECCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHH
Q ss_conf 43011077436877838898847560120345326761366465899989985898689999998519962776448867
Q gi|254780502|r 761 SNCMAIAPTATIANICGVSQSIDPSYQNLYVKSNMSGDFTVVNSFLVNELKQRDLWDEAMISDLKYHDGSIGNIERIPDD 840 (954)
Q Consensus 761 s~l~aiAPT~t~S~i~g~s~gIEP~~a~~y~r~~~~G~~~~vn~~l~~~l~~~g~~~~~~~~~i~~~~Gsv~~i~~ip~~ 840 (954)
T Consensus 616 S~l~AiAPT~S~S~I~g~s~gIEPi~~~~~~~~~~g~~~----~~---------------------------~~p~l~~~ 664 (743)
T PRK07088 616 GYITAVAPNGSTATIAGTSEGIDPVMKRFFLEEKKGSIT----PK---------------------------TAPDLNEE 664 (743)
T ss_pred HCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHCCCCC----CC---------------------------CCCCCCHH
T ss_conf 302047881899998396877485732566244249855----01---------------------------27765621
Q ss_pred HHHHCCCHHCCCHHHHHHHHHHHCCHHCCCEEEEEEC-CCCCHHHHHHHHHHHHHCCCCEEEEECCCCC
Q ss_conf 8865052220688999999985206300523204754-8999899999999999729867979658841
Q gi|254780502|r 841 LKKIHATAFEIDPMWLIESASRRQKWIDQAQSLNLYL-DEPSGKKLDFIYRQAWLMGLKTTYYLRSRSA 908 (954)
Q Consensus 841 ~k~~f~ta~ei~~~~~i~~~a~~Q~~IDqsiS~tl~~-~~~t~~~i~~~y~~Aw~~GlKt~yy~R~~s~ 908 (954)
T Consensus 665 ~~~~yktA~eI~~~~~I~maA~rQk~IDQs~S~nl~~~~~~t~~dl~~~y~~Awk~GlKT~YY~Rs~~~ 733 (743)
T PRK07088 665 NFWYYKEAYNIDQQWSVKANGVRQRHIDQGQSFNLYITPEYTMRQIMNLYIEAWKQGVKSIYYVRSKSL 733 (743)
T ss_pred CCCEEECHHCCCHHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCHHCCCCCCCC
T ss_conf 052340072089899999999874656120237156589999999999999999809513005777878