HHsearch alignment for GI: 254780502 and conserved domain: PRK07306
>PRK07306 ribonucleotide-diphosphate reductase subunit alpha; Validated.
Probab=100.00 E-value=0 Score=1410.25 Aligned_cols=610 Identities=27% Similarity=0.417 Sum_probs=550.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC-CC-EEECHHHHHHHHHHHHHCC
Q ss_conf 888998665576778777751773999997641210112898999999997621148-92-7538899999999654164
Q gi|254780502|r 254 EYFCRYIEEGVKARLLHESMMDFDLVYLANDLKYERDFAFEYLGLQILYDRYFLHIN-GS-RIEMPQAFFMRVAMGLALK 331 (954)
Q Consensus 254 ~~f~~~i~~G~~~~~i~~~l~~~dl~~L~~~Id~~RD~~F~Y~Gl~tL~~rYllk~~-~~-~~E~pQ~~~mrVA~~la~~ 331 (954)
T Consensus 55 e~~~~l~~~~~~~~~~~~~y~~~~i~~~~~~~~~~~f~f~s~m~a~kfy~~y~lk~~d~~~~le~~~dr~~~~al~~a~g 134 (720)
T PRK07306 55 EKINYLIENDYIESAFIQKYSPEFIEKLYQFLKAQNFRFKSFMAAYKFYNQYALKTNDGEYYLENFEDRVLFNALYFADG 134 (720)
T ss_pred HHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf 99999997572678999756999999999998644675077888999999875217787830127999999999997187
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCC-CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 545368999999999743303586112221002-2223211025476641358999989999985105444101244311
Q gi|254780502|r 332 ETEKEKRAVEFYNLLSSFHFMCSTPTLFNSGTR-HPQLSSCFLTTVPDDLYGIFGALQENAMLAKYSGGLGNDWTPVRGL 410 (954)
Q Consensus 332 e~~~~~~~~~~Y~~ls~~~~~~atPtl~Nagt~-~~qlsSCfl~~v~Dsl~~I~~~~~~~a~isk~ggGiG~~~s~iR~~ 410 (954)
T Consensus 135 ~---~~~a~~~~~~~~~~~~~pATPTl~NaG~~~~gqlsSCFll~v~Dsl~~I~~~~~~~a~lSK~gGGvG~~~s~lRa~ 211 (720)
T PRK07306 135 D---EDLAKDLADEMIHQRYQPATPSFLNAGRARRGELVSCFLIQVTDDMNSIGRSINSALQLSRIGGGVGINLSNLREA 211 (720)
T ss_pred C---HHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCC
T ss_conf 2---9999999999984853368871111899999864424505788787899999999998864167476763135558
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCHHHHHHCCCHHHCCCHHHH
Q ss_conf 12000127876428899999989999974046667724789835678899997302578730233202320203487999
Q gi|254780502|r 411 GAHIHGTNGKSQGVIPFLKVANDTAVAVNQGGKRKGAVCAYLETWHIDVEEFLDLRKNTGDDRRRTHDMNTANWIPDLFM 490 (954)
Q Consensus 411 Gs~I~g~~G~ssG~v~flk~~n~~~~~v~QgG~RrGA~~~~l~~wH~Di~eFl~~k~n~G~~~~r~~~~~~av~i~D~Fm 490 (954)
T Consensus 212 Gs~Ikg~~G~ssGvvp~~k~~n~t~~~v~QgG~R~GA~avYL~~wH~DI~eFL~lKkn~Gde~~R~~dl~~~v~IpD~Fm 291 (720)
T PRK07306 212 GAPIKGYAGAASGVVPVMKLFEDSFSYSNQLGQRQGAGVVYLNVFHPDIIAFLSTKKENADEKVRVKTLSLGVTVPDKFY 291 (720)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHH
T ss_conf 99656879868656789999998997832488447751799577434599999834557971020322710021299999
Q ss_pred HHHHCCCCEEEEECCCCCCCCCCCCCCHH--HHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEEECHHH
Q ss_conf 98521287478710114441001344378--9987787521048860577866889999999999882881278331120
Q gi|254780502|r 491 KRVTQNAGWTLFSPDEVSDLHDLYGKEFE--IAYENYERQADRGEIKVFRKISAVALWRKMLTMLFETGHPWITFKDPCN 568 (954)
Q Consensus 491 ~~v~~~~~w~Lf~P~~~~~L~d~~g~~fe--~~Y~~~e~~~~~~~~~~~k~i~A~~l~~~i~~~~~etG~P~i~f~D~~N 568 (954)
T Consensus 292 ~~v~~~~~w~Lf~P~~---v~~~yG~~f~~~d~~~~Ye~~~~~~~i~-k~~I~Ar~L~~~Il~~q~ETG~PYi~fkD~~N 367 (720)
T PRK07306 292 ELARKNEDMYLFSPYS---VEKEYGVPFNYVDITKEYDELVANPNIT-KTKIKARDLETEISKLQQESGYPYIINIDTAN 367 (720)
T ss_pred HHHHCCCCEEEECCCC---CHHHHCCCCHHHHHHHHHHHHHHCCCCC-EEEEEHHHHHHHHHHHHHHHCCCEEEECHHHH
T ss_conf 9997289769877662---0466384100003899999986478854-04777999999999999985898188530431
Q ss_pred CCCCCCCCCEEEECCCCCCCCCCCCCCC------------CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 2221246670340467520013665443------------3211125540686254344798885589999999976531
Q gi|254780502|r 569 IRSPQQHVGVVHSSNLCTEITLNSSSEE------------TAVCNLGSINLLAHFANNQFDYDKLASTIRTAVRVLDNVI 636 (954)
Q Consensus 569 ~~~p~~~~g~I~~sNlC~Ei~l~~~~~e------------~~vCnL~SiNL~~~v~~~~~D~~~l~~~v~~avr~LDnVI 636 (954)
T Consensus 368 r~np~~--G~I~~SNLCtEI~q~~~Ps~~n~~~~~~~~g~~~sCNL~SiNL~~~~~~-----~d~~~~v~~avr~LdnVi 440 (720)
T PRK07306 368 RANPID--GKIIMSNLCSEILQVQTPSLINDAQEYVELGTDISCNLGSTNIVNMMTS-----PDFGRSIETMTRALTFVT 440 (720)
T ss_pred HCCCCC--CEEEEEECCCCCCCCCCCCCCCCCCCEECCCCCCEEECCCCCHHHHCCC-----CHHHHHHHHHHHHHHHHH
T ss_conf 159878--8046325575524046764346876400046643122065439872674-----047889999999999998
Q ss_pred CC-CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCCCCCC
Q ss_conf 12-10001888886443310002111188999972963233788999999999985779997898753117-78876678
Q gi|254780502|r 637 DI-NCHTIEKAKKSNHTHRAIGLGLMGFQSALHLLHIPYASPEAVEIADESMEFISFHAISASVELAQERG-AYSSFKGS 714 (954)
Q Consensus 637 d~-n~yp~~~~~~~~~~~R~iGlGv~Glad~L~~~gi~Y~S~ea~~~~~~i~e~i~~~a~~aS~~LAkErG-~~~~f~gS 714 (954)
T Consensus 441 D~~ni~~vp~a~~sN~r~R~IGLGvmGlhd~L~k~~Ipy~S~EA~~~n~~iFe~I~y~Al~AS~eLAkErGe~y~~FegS 520 (720)
T PRK07306 441 DSSNIDAVPSIKHGNSQAHTIGLGAMGLHSYLAQNHIEYGSPESIEFTSIYFMLLNYWTLVASNNIARERGETFHNFEKS 520 (720)
T ss_pred HCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
T ss_conf 40288865689997653288120246899999987998699999999999999999999999999999829988776788
Q ss_pred HHHCCCCCHHHH------HCCHHHCCCC-CCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCH
Q ss_conf 121387624466------3005522533-454021027289999999841204430110774368778388988475601
Q gi|254780502|r 715 LWDQGVFPIDSI------GLLAEVRDEL-AMNRTSRLPWDELKKRVKTIGMRNSNCMAIAPTATIANICGVSQSIDPSYQ 787 (954)
Q Consensus 715 ~~~~G~~~~d~~------~~~~~~~~~~-~~~~~~~~dW~~Lr~~i~~~G~RNs~l~aiAPT~t~S~i~g~s~gIEP~~a 787 (954)
T Consensus 521 ~~~~G~~-f~~~~~~~~~p~~~~i~~~~~~~~~p~~~DW~~Lre~Ikk~GlRNS~llAiAPTaSiS~I~g~t~siePi~s 599 (720)
T PRK07306 521 KYADGSY-FDKYVTGDFVPKSDKVKELFKGIFIPTAEDWEALRDAVMKDGLYHQNRLAVAPNGSISYINDTSASIHPITQ 599 (720)
T ss_pred CCCCCCC-CCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCHHHH
T ss_conf 4302645-111133334442055665540467885655999999999718641002120784438876388665442477
Q ss_pred HEEEEE-CCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHCCCHHHHHHHHHHHCCH
Q ss_conf 203453-2676136646589998998589868999999851996277644886788650522206889999999852063
Q gi|254780502|r 788 NLYVKS-NMSGDFTVVNSFLVNELKQRDLWDEAMISDLKYHDGSIGNIERIPDDLKKIHATAFEIDPMWLIESASRRQKW 866 (954)
Q Consensus 788 ~~y~r~-~~~G~~~~vn~~l~~~l~~~g~~~~~~~~~i~~~~Gsv~~i~~ip~~~k~~f~ta~ei~~~~~i~~~a~~Q~~ 866 (954)
T Consensus 600 ~i~~R~e~~~g~i~~~-------------------------------~p~L~~d~~~~YKTA~EIdq~~iId~aA~RQk~ 648 (720)
T PRK07306 600 RIEERQEKKIGKIYYP-------------------------------APGLSTDTIPYYTSAYDMDMRKVIDVYAAATEH 648 (720)
T ss_pred HHHHHHHCCCCCEEEE-------------------------------CCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCC
T ss_conf 8898874237856621-------------------------------787777789874218507989999999987474
Q ss_pred HCCCEEEEEECCC---------------CCHHHHHHHHHHHHHCCCCEEEEECCCCCH
Q ss_conf 0052320475489---------------998999999999997298679796588411
Q gi|254780502|r 867 IDQAQSLNLYLDE---------------PSGKKLDFIYRQAWLMGLKTTYYLRSRSAT 909 (954)
Q Consensus 867 IDqsiS~tl~~~~---------------~t~~~i~~~y~~Aw~~GlKt~yy~R~~s~~ 909 (954)
T Consensus 649 IDQsqSlNLf~~~~ip~~~y~~k~~~~~~t~r~L~~l~~yAWkkGLKTlYYlRT~~~~ 706 (720)
T PRK07306 649 VDQGLSLTLFMRSTLPKGLYEWKDRTDKMTTRDLSILRNYAFNKGIKSIYYIRTFTDD 706 (720)
T ss_pred CCHHHCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCC
T ss_conf 6564441113367765321122345554359999999999997284526875047765