HHsearch alignment for GI: 254780502 and conserved domain: PRK07562

>PRK07562 ribonucleotide-diphosphate reductase subunit alpha; Validated.
Probab=100.00  E-value=0  Score=1059.02  Aligned_cols=567  Identities=25%  Similarity=0.404  Sum_probs=480.5

Q ss_pred             CHHHHHHHHHHHHHC--CC---CCCHHHHHHHHH----HHHHCCCCCCCCHHHHHHC-----------------------
Q ss_conf             889999999965416--45---453689999999----9974330358611222100-----------------------
Q gi|254780502|r  316 MPQAFFMRVAMGLAL--KE---TEKEKRAVEFYN----LLSSFHFMCSTPTLFNSGT-----------------------  363 (954)
Q Consensus       316 ~pQ~~~mrVA~~la~--~e---~~~~~~~~~~Y~----~ls~~~~~~atPtl~Nagt-----------------------  363 (954)
T Consensus       105 s~~q~~~r~~~~~~~wg~~~gyf~~~~da~~f~~e~~~~l~~q~~a~nsp~wfn~gl~~~ygi~g~~~g~~~~d~~~~~~  184 (1177)
T PRK07562        105 SAKQVFDRLAGCWTYWGWKGGYFDSEEDARAFYDELRYMLATQMVAPNSPQWFNTGLHWAYGIDGPGQGHFYVDPKTGKL  184 (1177)
T ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCHHCCCCCCCCCCEEECCCCCCE
T ss_conf             09999999999999887637830788899999999999999745278998327867401016667777733225655721


Q ss_pred             -------CCCCCCCCCCCCCCCCH---HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             -------22223211025476641---35899998999998510544410124431112000127876428899999989
Q gi|254780502|r  364 -------RHPQLSSCFLTTVPDDL---YGIFGALQENAMLAKYSGGLGNDWTPVRGLGAHIHGTNGKSQGVIPFLKVAND  433 (954)
Q Consensus       364 -------~~~qlsSCfl~~v~Dsl---~~I~~~~~~~a~isk~ggGiG~~~s~iR~~Gs~I~g~~G~ssG~v~flk~~n~  433 (954)
T Consensus       185 ~~~~~~y~~pq~~acfi~sv~d~l~~~~~i~~~~~~ea~~fk~GsG~G~nfS~lR~~~e~lsg-GG~aSGPvSFMki~D~  263 (1177)
T PRK07562        185 TKSKSAYEHPQPHACFIQSVEDDLVNEGGIMDLWVREARLFKYGSGTGTNFSNLRGEGEKLSG-GGKSSGLMSFLKIGDR  263 (1177)
T ss_pred             ECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHH
T ss_conf             115762337776546788523334475409999998665431577367362113678885789-9866860789999898


Q ss_pred             HHHHHHCCC-CCCCCEEEEEECCCCCHHHHHHHCCCC---------C----------------------C---HHHHH--
Q ss_conf             999974046-667724789835678899997302578---------7----------------------3---02332--
Q gi|254780502|r  434 TAVAVNQGG-KRKGAVCAYLETWHIDVEEFLDLRKNT---------G----------------------D---DRRRT--  476 (954)
Q Consensus       434 ~~~~v~QgG-~RrGA~~~~l~~wH~Di~eFl~~k~n~---------G----------------------~---~~~r~--  476 (954)
T Consensus       264 aa~aIKsGG~tRRaAkM~iL~vDHPDIeeFI~~K~~EE~Kv~aLv~g~~~~~~~l~~i~~a~~~~~~~~~~~fDp~~n~~  343 (1177)
T PRK07562        264 AAGAIKSGGTTRRAAKMVIVDIDHPDIEEFIDWKVKEEQKVASLVTGSKINSKHLKAIMKACVNCEGSGDDCFDPAKNPA  343 (1177)
T ss_pred             HHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
T ss_conf             77599737976664415774488864899987610211225766400077899999999987414433112357311667


Q ss_pred             ---------------------------------------------------HCCCHHHCCCHHHHHHHHCCCCEEEEECC
Q ss_conf             ---------------------------------------------------02320203487999985212874787101
Q gi|254780502|r  477 ---------------------------------------------------HDMNTANWIPDLFMKRVTQNAGWTLFSPD  505 (954)
Q Consensus       477 ---------------------------------------------------~~~~~av~i~D~Fm~~v~~~~~w~Lf~P~  505 (954)
T Consensus       344 l~~~i~~A~~~~vp~~~i~rv~~~~~qG~~~i~f~~yd~~~~~eay~tv~gqN~N~SV~vtD~FM~AVe~D~~~~L~~r~  423 (1177)
T PRK07562        344 LKREIKAAKKALVPENYIKRVIQLARQGYTDIDFPTYDTDWDSEAYLTVSGQNSNNSVRVTDEFLRAVENDGDWNLTART  423 (1177)
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECHHHHHHHHCCCCCEEEECC
T ss_conf             88999987750572777777777653155434543335666753124540102563386079999998659960358668


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCCCCCEEEECCCC
Q ss_conf             14441001344378998778752104886057786688999999999988288127833112022212466703404675
Q gi|254780502|r  506 EVSDLHDLYGKEFEIAYENYERQADRGEIKVFRKISAVALWRKMLTMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLC  585 (954)
Q Consensus       506 ~~~~L~d~~g~~fe~~Y~~~e~~~~~~~~~~~k~i~A~~l~~~i~~~~~etG~P~i~f~D~~N~~~p~~~~g~I~~sNlC  585 (954)
T Consensus       424 ~---------------------------G~v~ktv~AreLw~kI~~aAW~~gDPGl~F~dtIN~wht~p~~G~I~aTNPC  476 (1177)
T PRK07562        424 D---------------------------GKVAKTLKARDLWEKIGYAAWASADPGLQFNTTINDWHTCPASGRIRASNPC  476 (1177)
T ss_pred             C---------------------------CCEEEEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCEEECCCC
T ss_conf             9---------------------------8542586599999999999986289850651113254788877855533687


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHCC--CCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHH
Q ss_conf             200136654433211125540686254--344798885589999999976531121000188888644331000211118
Q gi|254780502|r  586 TEITLNSSSEETAVCNLGSINLLAHFA--NNQFDYDKLASTIRTAVRVLDNVIDINCHTIEKAKKSNHTHRAIGLGLMGF  663 (954)
Q Consensus       586 ~Ei~l~~~~~e~~vCnL~SiNL~~~v~--~~~~D~~~l~~~v~~avr~LDnVId~n~yp~~~~~~~~~~~R~iGlGv~Gl  663 (954)
T Consensus       477 sE~~lld~~a----CNLgSiNL~~fv~~~~g~fD~e~l~~avrl~t~~LDi~V~~a~fP~~eIa~~s~~~R~iGLG~~gl  552 (1177)
T PRK07562        477 SEYMFLDDTA----CNLASLNLLTFRDEETGRFDVEAYEHACRLWTVVLEISVLMAQFPSKEIAELSYEFRTLGLGYANI  552 (1177)
T ss_pred             CCCCCCCCCC----CCCCEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCH
T ss_conf             6767788763----021313499760377880649999999999999998630122498099999874220347320469


Q ss_pred             HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHC------------CCC-CHHHHHCCH
Q ss_conf             8999972963233788999999999985779997898753117788766781213------------876-244663005
Q gi|254780502|r  664 QSALHLLHIPYASPEAVEIADESMEFISFHAISASVELAQERGAYSSFKGSLWDQ------------GVF-PIDSIGLLA  730 (954)
Q Consensus       664 ad~L~~~gi~Y~S~ea~~~~~~i~e~i~~~a~~aS~~LAkErG~~~~f~gS~~~~------------G~~-~~d~~~~~~  730 (954)
T Consensus       553 adlLm~lGipYDS~egrala~~i~a~mt~~Ay~~SaelA~e~G~Fp~y~~n~~~mlrViR~hr~aa~~~~~~ye~l~~~P  632 (1177)
T PRK07562        553 GGLLMTMGIPYDSPEGRAICGALSAIMTGVAYATSAEMAKELGPFPGYAKNADHMLRVIRNHRRAAHGESEGYEGLSVNP  632 (1177)
T ss_pred             HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             99999749987999999999999999999999999999997589865224189999998765544304654433234566


Q ss_pred             HHCCCCCCC-----CHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCC-CCCCCCCCHHEEEEECC-CCCEEEEC
Q ss_conf             522533454-----021027289999999841204430110774368778388-98847560120345326-76136646
Q gi|254780502|r  731 EVRDELAMN-----RTSRLPWDELKKRVKTIGMRNSNCMAIAPTATIANICGV-SQSIDPSYQNLYVKSNM-SGDFTVVN  803 (954)
Q Consensus       731 ~~~~~~~~~-----~~~~~dW~~Lr~~i~~~G~RNs~l~aiAPT~t~S~i~g~-s~gIEP~~a~~y~r~~~-~G~~~~vn  803 (954)
T Consensus       633 ~~ld~~~~p~~~l~~~a~~~wd~al~~Gek~G~RNAq~TvIAPTGTIslimdcdSsGIEP~FALvk~kkl~gGg~~kivN  712 (1177)
T PRK07562        633 VPLDHANCPDADLVAHAKAAWDKALELGEKHGYRNAQVTVIAPTGTIGLVMDCDTTGIEPDFALVKFKKLAGGGYFKIIN  712 (1177)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEECCCCCCCCCCHHHHHHEECCCCCEEEEEC
T ss_conf             44652338628899999988999998777633210036763477852566437877768640566410004784367632


Q ss_pred             HHHHHHHHHCCCCCHHHHHHHHHC--C-----------------------------------------------------
Q ss_conf             589998998589868999999851--9-----------------------------------------------------
Q gi|254780502|r  804 SFLVNELKQRDLWDEAMISDLKYH--D-----------------------------------------------------  828 (954)
Q Consensus       804 ~~l~~~l~~~g~~~~~~~~~i~~~--~-----------------------------------------------------  828 (954)
T Consensus       713 ~~v~~aL~~LgY~~~~i~~i~~y~~g~gsl~~~p~i~~~~l~~~Gf~~~~i~~ve~~l~~~fdI~~~fn~w~lGe~f~~~  792 (1177)
T PRK07562        713 RAVPEALRTLGYSESQIAEIEAYAVGHGTLNGAPGINHSTLKAKGFTDEKIEKVEAALPSAFDIKFAFNKWTLGEDFCKD  792 (1177)
T ss_pred             HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHCCCHHHHH
T ss_conf             67799999759977999999999850674037864368999875987889999987403334310013300125145564


Q ss_pred             -------------------------------------CCCCCCCCCCHHHHHHCCCHHC--------CCHHHHHHHHHHH
Q ss_conf             -------------------------------------9627764488678865052220--------6889999999852
Q gi|254780502|r  829 -------------------------------------GSIGNIERIPDDLKKIHATAFE--------IDPMWLIESASRR  863 (954)
Q Consensus       829 -------------------------------------Gsv~~i~~ip~~~k~~f~ta~e--------i~~~~~i~~~a~~  863 (954)
T Consensus       793 ~lg~~~e~l~d~~fd~L~~lG~s~~ei~aan~~v~G~mtiegaP~Lk~ehl~VFdcA~~cg~~G~R~is~e~Hv~MqAA~  872 (1177)
T PRK07562        793 TLGITAEQLNDPGFDLLEALGFSKKDIEAANDHVCGAMTLEGAPHLKAEHLPVFDCANPCGKIGKRYLSVESHIRMMAAA  872 (1177)
T ss_pred             HCCCCHHHHCCCCHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             21888888437556789870888889988765503666315776667888878865010133564234899999999997


Q ss_pred             CCHHCCCEEEEEEC-CCCCHHHHHHHHHHHHHCCCCEEEEECCCCC-HHHHHH
Q ss_conf             06300523204754-8999899999999999729867979658841-111210
Q gi|254780502|r  864 QKWIDQAQSLNLYL-DEPSGKKLDFIYRQAWLMGLKTTYYLRSRSA-TSVEKS  914 (954)
Q Consensus       864 Q~~IDqsiS~tl~~-~~~t~~~i~~~y~~Aw~~GlKt~yy~R~~s~-~~~ek~  914 (954)
T Consensus       873 QpfidgAISKTINmP~~ATvEDv~~aY~~aw~lGlKgitvYRDGSKlsQpL~~  925 (1177)
T PRK07562        873 QPFISGAISKTINMPNEATVEDCKNAYLLSWKLALKANALYRDGSKLSQPLNS  925 (1177)
T ss_pred             HHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
T ss_conf             77606876215769898999999999999998387557875168744564542