HHsearch alignment for GI: 254780502 and conserved domain: PRK08332
>PRK08332 ribonucleotide-diphosphate reductase subunit alpha; Validated.
Probab=97.99 E-value=0.00029 Score=50.47 Aligned_cols=299 Identities=25% Similarity=0.400 Sum_probs=217.9
Q ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 46980289732248679999999999870487764321079999999999999998506678985211454899999986
Q gi|254780502|r 29 VQVIKRNGGVTSFDPSKISRAIMKAFMAVEGKGASRSIRVQDIIKNLTEQTVTRLLQHNKSALIVHIEDIQDQVECSLMQ 108 (954)
Q Consensus 29 m~ViKRnG~vv~Fd~~KI~~AI~KAFlav~~~~~~~s~~~~~~v~~lt~~Vv~~i~~~~~~~~~~~VE~IQD~VE~~LM~ 108 (954)
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 75 (1748)
T PRK08332 4 EKVMKRDGRIVPFDEERIRWAIQRAMLEV-------GIRDEKKLDEVVKRIVQRI-NELYDGKIPHIENIQDIVELELMR 75 (1748)
T ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHHHH-------CCCCHHHHHHHHHHHHHHH-HHHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 76763278535670899999999999885-------3530676899999999998-887458886324378899999987
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 12089999988909999999987642100002344228980599760259899999999985166668999999989730
Q gi|254780502|r 109 SGHHKITREYVLYREERSDVRAAQSHSKSDAPIAPKLKIMMDDGTLISFNSKRLEMIVEEACSGLQDVSSKIVLSETYKN 188 (954)
Q Consensus 109 ~g~~~VAkaYILYRe~Ra~~R~~~~~~~~~~~~~~~l~V~krDG~~e~~d~~ki~~~i~~ac~gL~~v~~~~i~~~~~~~ 188 (954)
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~--------- 114 (1748)
T PRK08332 76 AGLFDVAKAYILYRKKKAEIREEKKKILNKDEL--------------------------------DEIDKR--------- 114 (1748)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH--------------------------------HHHHHH---------
T ss_conf 315787778876455567888988740473555--------------------------------667654---------
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 37898889999999999998744187714677999999999986210033310110446777547888998665576778
Q gi|254780502|r 189 MYDGLSESDLETALIFSSRTLIEKEPNYAKVTARFLLEKLRREVLTTVYKKPQKATHHEMQCLYPEYFCRYIEEGVKARL 268 (954)
Q Consensus 189 lydgitt~el~~~li~aA~~Li~~ePdy~~vAaRlll~~l~kev~~~~~~~~~~~~~~~~~~~y~~~f~~~i~~G~~~~~ 268 (954)
T Consensus 115 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 178 (1748)
T PRK08332 115 -------FSINALRVLASRYLIKDEKGEIIESPRELFERVAI--LAVIPDILYDERVFDKNGGHEQDLK-------AIER 178 (1748)
T ss_pred -------CCHHHHHHHHHHHEECCCCCCHHCCHHHHHHHHHH--HHHCCHHHCCHHEECCCCCCHHHHH-------HHHH
T ss_conf -------03788999877751114577700086999888788--7515134301010046797067689-------9999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
Q ss_conf 77775177399999764121011289899999999762114892753889999999965416454536899999999974
Q gi|254780502|r 269 LHESMMDFDLVYLANDLKYERDFAFEYLGLQILYDRYFLHINGSRIEMPQAFFMRVAMGLALKETEKEKRAVEFYNLLSS 348 (954)
Q Consensus 269 i~~~l~~~dl~~L~~~Id~~RD~~F~Y~Gl~tL~~rYllk~~~~~~E~pQ~~~mrVA~~la~~e~~~~~~~~~~Y~~ls~ 348 (954)
T Consensus 179 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 250 (1748)
T PRK08332 179 YLEHFDEFDGKFSIGK------FKLNKWHFERLLNLYKELAEKGKMKLPIDEFLA--MLEKGAFDEYEDEIEEYFRLMTG 250 (1748)
T ss_pred HHHHHHHCCCCEEECE------EEHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH--HHHCCCCHHHHHHHHHHHHHHHC
T ss_conf 9987651277022341------530168899999999999862785586899999--98636731567899999998608
Q ss_pred CCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 3303586112221002222321102547664135899998999998510544
Q gi|254780502|r 349 FHFMCSTPTLFNSGTRHPQLSSCFLTTVPDDLYGIFGALQENAMLAKYSGGL 400 (954)
Q Consensus 349 ~~~~~atPtl~Nagt~~~qlsSCfl~~v~Dsl~~I~~~~~~~a~isk~ggGi 400 (954)
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (1748)
T PRK08332 251 QIFMPNTPALINSGRPLGMLSACFVVPIEDDMESIMKAAHDVAMIQKAGGGC 302 (1748)
T ss_pred CCCCCCCHHHHCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 5215898677428985320103679862113999998766789987606874