HHsearch alignment for GI: 254780502 and conserved domain: PRK09209

>PRK09209 ribonucleotide-diphosphate reductase subunit alpha; Validated.
Probab=100.00  E-value=0  Score=1739.09  Aligned_cols=712  Identities=34%  Similarity=0.531  Sum_probs=656.2

Q ss_pred             CCCCEEEEECCCCEE-CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHC-CCCH
Q ss_conf             344228980599760-2598999999999851666689999999897--30378988899999999999987441-8771
Q gi|254780502|r  141 IAPKLKIMMDDGTLI-SFNSKRLEMIVEEACSGLQDVSSKIVLSETY--KNMYDGLSESDLETALIFSSRTLIEK-EPNY  216 (954)
Q Consensus       141 ~~~~l~V~krDG~~e-~~d~~ki~~~i~~ac~gL~~v~~~~i~~~~~--~~lydgitt~el~~~li~aA~~Li~~-ePdy  216 (954)
T Consensus        27 ~~~~~~v~k~~g~~~~p~~~~k~~~~v~~a~~~l~~v~~~~v~~~~~~~~q~~dgi~t~~i~~~li~~a~~li~~~~P~y  106 (785)
T PRK09209         27 QNVSTWITKEAGNRKLPFEPERLERAIDQIHAEFPQLDVEDYKRRVFGFVERKDSVNADDLVDLLIREAEARVDLTTPEW  106 (785)
T ss_pred             CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf             76535899468874688688999999999965466899999999998188542896199999999999998658779748


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             46779999999999862100333101104467775478889986655767787777517739999976412101128989
Q gi|254780502|r  217 AKVTARFLLEKLRREVLTTVYKKPQKATHHEMQCLYPEYFCRYIEEGVKARLLHESMMDFDLVYLANDLKYERDFAFEYL  296 (954)
Q Consensus       217 ~~vAaRlll~~l~kev~~~~~~~~~~~~~~~~~~~y~~~f~~~i~~G~~~~~i~~~l~~~dl~~L~~~Id~~RD~~F~Y~  296 (954)
T Consensus       107 ~~vaarl~~~~l~k~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~y~~~ll~~y~~~e~~~l~~~id~~RD~~f~Y~  181 (785)
T PRK09209        107 EHFAARLYLRRLYKRASRNRFYDAS-----QKYGSFVGLQESLADRGIYSNDILRRYSKEELIEAGKMIDPERDKLFTYN  181 (785)
T ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCC-----CCCHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCHH
T ss_conf             9999999999999998733366633-----35305999999998754240888875179999999714473543477829


Q ss_pred             HHHHHHHHHHHCC-CCCEEECHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCC
Q ss_conf             9999999762114-892753889999999965416454--5368999999999743303586112221002222321102
Q gi|254780502|r  297 GLQILYDRYFLHI-NGSRIEMPQAFFMRVAMGLALKET--EKEKRAVEFYNLLSSFHFMCSTPTLFNSGTRHPQLSSCFL  373 (954)
Q Consensus       297 Gl~tL~~rYllk~-~~~~~E~pQ~~~mrVA~~la~~e~--~~~~~~~~~Y~~ls~~~~~~atPtl~Nagt~~~qlsSCfl  373 (954)
T Consensus       182 g~~~l~~rYl~~~~~~~i~E~PQ~~~m~vAm~l~~~e~~~~r~~~v~~~Y~~lS~~~~~~aTPtL~nagt~~~QlSSCfl  261 (785)
T PRK09209        182 GLYLLATRYLATDSSRGVYELPQERWLTIALYLMQNEPRERRMQLVGEAYWALSNLYMTVATPTLANAGKVGGQLSSCFI  261 (785)
T ss_pred             HHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf             89999984571778999846579999999999842476677999999999998568635789852068988987341683


Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf             54766413589999899999851054441012443111200012787642889999998999997404666772478983
Q gi|254780502|r  374 TTVPDDLYGIFGALQENAMLAKYSGGLGNDWTPVRGLGAHIHGTNGKSQGVIPFLKVANDTAVAVNQGGKRKGAVCAYLE  453 (954)
Q Consensus       374 ~~v~Dsl~~I~~~~~~~a~isk~ggGiG~~~s~iR~~Gs~I~g~~G~ssG~v~flk~~n~~~~~v~QgG~RrGA~~~~l~  453 (954)
T Consensus       262 ~~vdDsl~sI~~t~~~~a~isk~gGGiG~~~s~IRa~Gs~Irg~~g~ssGvVpf~kv~n~t~~~v~QgG~R~GA~~vyL~  341 (785)
T PRK09209        262 DTVDDSLQGIYDSNTDVARVSKHGGGVGAYLGYVRSSGSAIRGVKNSSGGVIPWIKQLNNTAVSVDQLGQRKGAIAVYLD  341 (785)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf             35788777999999999986725867864124468799854788884898223999999999998638986662489978


Q ss_pred             CCCCCHHHHHHHCCCCCCHHHHHHCCCHHHCCCHHHHHHHHCCCCEEEEECCCCCC-----CCCCCCCC-----HHHHHH
Q ss_conf             56788999973025787302332023202034879999852128747871011444-----10013443-----789987
Q gi|254780502|r  454 TWHIDVEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVTQNAGWTLFSPDEVSD-----LHDLYGKE-----FEIAYE  523 (954)
Q Consensus       454 ~wH~Di~eFl~~k~n~G~~~~r~~~~~~av~i~D~Fm~~v~~~~~w~Lf~P~~~~~-----L~d~~g~~-----fe~~Y~  523 (954)
T Consensus       342 iwH~DI~eFL~lK~n~Gde~~R~~dl~~av~i~DlFMerv~~~~~w~Lf~P~ev~~~~g~~l~d~~~e~~~~~~f~~~Y~  421 (785)
T PRK09209        342 IWHKDIEAFLDLRLNNGDQRLRAHDVFTSVCIPDLFMEAVERRGDWYLFDPHEVKRVKGWYLQDFYDEKKGNGSFREKYE  421 (785)
T ss_pred             CCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEECHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHH
T ss_conf             97063999996056677576642137403011999999997199668878331000047427776532302335999999


Q ss_pred             HHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCCCCCEEEECCCCCCCCCCCCC---------
Q ss_conf             78752104886057786688999999999988288127833112022212466703404675200136654---------
Q gi|254780502|r  524 NYERQADRGEIKVFRKISAVALWRKMLTMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNSSS---------  594 (954)
Q Consensus       524 ~~e~~~~~~~~~~~k~i~A~~l~~~i~~~~~etG~P~i~f~D~~N~~~p~~~~g~I~~sNlC~Ei~l~~~~---------  594 (954)
T Consensus       422 ~~~~d~~i----~kk~I~A~eL~~~Il~~~~ETG~Pyi~f~D~~Nr~sp~~~~G~I~~SNLC~EI~~~~~P~~~~~e~~~  497 (785)
T PRK09209        422 ECVADERI----SRKTVKAIEIMKRIMVSQLETGNPFMFYRDEVNRKNPNKHEGMVYSSNLCTEILQNMSPTRMIQEIIS  497 (785)
T ss_pred             HHHHCCCC----CCEEEEHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf             99738754----43476299999999999998689637883455535997678967743475113557888643222367


Q ss_pred             ----------CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf             ----------4332111255406862543447988855899999999765311210001888886443310002111188
Q gi|254780502|r  595 ----------EETAVCNLGSINLLAHFANNQFDYDKLASTIRTAVRVLDNVIDINCHTIEKAKKSNHTHRAIGLGLMGFQ  664 (954)
Q Consensus       595 ----------~e~~vCnL~SiNL~~~v~~~~~D~~~l~~~v~~avr~LDnVId~n~yp~~~~~~~~~~~R~iGlGv~Gla  664 (954)
T Consensus       498 ~~ei~~~~~~Ge~avCnL~SiNL~~~v~~~---~d~l~~~v~~avR~LDnVID~n~yPv~~a~~sn~~~R~IGLGvmGla  574 (785)
T PRK09209        498 GGQIVITKKAGDFVVCNLSSINLGRAVTVG---ADVLERLIPIQVRMLDNVIDLNELPVPQATITNQKYRAIGLGTFGWH  574 (785)
T ss_pred             CCCEEECCCCCCEEEEECCCCCHHHHHCCC---CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHCCCCHHHH
T ss_conf             762221146775458624313398873156---01699999999999899772355738999999986124244521699


Q ss_pred             HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHCCHHHCCCCCCCCHHHC
Q ss_conf             99997296323378899999999998577999789875311778876678121387624466300552253345402102
Q gi|254780502|r  665 SALHLLHIPYASPEAVEIADESMEFISFHAISASVELAQERGAYSSFKGSLWDQGVFPIDSIGLLAEVRDELAMNRTSRL  744 (954)
Q Consensus       665 d~L~~~gi~Y~S~ea~~~~~~i~e~i~~~a~~aS~~LAkErG~~~~f~gS~~~~G~~~~d~~~~~~~~~~~~~~~~~~~~  744 (954)
T Consensus       575 d~Lak~gi~Y~S~eA~~l~~~i~E~I~y~a~~AS~eLAkErG~yp~F~gS~~s~G~~~-~-------------~~~~~~~  640 (785)
T PRK09209        575 HLLALKGIHWNSEEAEDYADELYERINYLTIQASMELAKEKGAYPVFRGSDWHTGEYF-R-------------RRDYNSP  640 (785)
T ss_pred             HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-C-------------CCCCCCC
T ss_conf             9999859986898999999999999999999999999997589988889821027621-4-------------4677630


Q ss_pred             CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHEEEEECCCCCEEEECHHHHHHHHHCCCCCHHHHHHH
Q ss_conf             72899999998412044301107743687783889884756012034532676136646589998998589868999999
Q gi|254780502|r  745 PWDELKKRVKTIGMRNSNCMAIAPTATIANICGVSQSIDPSYQNLYVKSNMSGDFTVVNSFLVNELKQRDLWDEAMISDL  824 (954)
Q Consensus       745 dW~~Lr~~i~~~G~RNs~l~aiAPT~t~S~i~g~s~gIEP~~a~~y~r~~~~G~~~~vn~~l~~~l~~~g~~~~~~~~~i  824 (954)
T Consensus       641 dW~~Lr~~I~~~GlRNS~l~AiAPT~S~S~I~g~T~gIEP~~~~~y~k~~k~~~~~~~~p~l~-----------------  703 (785)
T PRK09209        641 QWDELAAQVAVNGVRNAYLLAVAPNMSTAQIAGSTASIDPIYSAFYYEEKKDYRRPVTAPDLS-----------------  703 (785)
T ss_pred             CHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHHEEEECCCEEEEECCCCC-----------------
T ss_conf             699999999884844101132388389999759786418686500014405661578569887-----------------


Q ss_pred             HHCCCCCCCCCCCCHHHHHHCCCHHCCCHHHHHHHHHHHCCHHCCCEEEEEEC-CCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             85199627764488678865052220688999999985206300523204754-89998999999999997298679796
Q gi|254780502|r  825 KYHDGSIGNIERIPDDLKKIHATAFEIDPMWLIESASRRQKWIDQAQSLNLYL-DEPSGKKLDFIYRQAWLMGLKTTYYL  903 (954)
Q Consensus       825 ~~~~Gsv~~i~~ip~~~k~~f~ta~ei~~~~~i~~~a~~Q~~IDqsiS~tl~~-~~~t~~~i~~~y~~Aw~~GlKt~yy~  903 (954)
T Consensus       704 -------------~~~~~~y~kta~eId~~~~I~~~A~rQk~IDQsiS~Nl~~~~~~~~~~l~~~yl~Awk~GlKT~YY~  770 (785)
T PRK09209        704 -------------LETWPYYEKGAYKVDQFASIRQNARRQRHVDQSISFNFYVPSTIRASTLLDLHMTAWREGLKTTYYV  770 (785)
T ss_pred             -------------HHHHHHHCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEC
T ss_conf             -------------6766653132602798999999998824262011174258999999999999999998294130367


Q ss_pred             CCCCC
Q ss_conf             58841
Q gi|254780502|r  904 RSRSA  908 (954)
Q Consensus       904 R~~s~  908 (954)
T Consensus       771 Rt~~~  775 (785)
T PRK09209        771 RSNDI  775 (785)
T ss_pred             CCCCC
T ss_conf             88888