HHsearch alignment for GI: 254780502 and conserved domain: PRK09209
>PRK09209 ribonucleotide-diphosphate reductase subunit alpha; Validated.
Probab=100.00 E-value=0 Score=1739.09 Aligned_cols=712 Identities=34% Similarity=0.531 Sum_probs=656.2
Q ss_pred CCCCEEEEECCCCEE-CCCHHHHHHHHHHHHCCCCCCCHHHHHHHHH--HHCCCCCCHHHHHHHHHHHHHHHHHC-CCCH
Q ss_conf 344228980599760-2598999999999851666689999999897--30378988899999999999987441-8771
Q gi|254780502|r 141 IAPKLKIMMDDGTLI-SFNSKRLEMIVEEACSGLQDVSSKIVLSETY--KNMYDGLSESDLETALIFSSRTLIEK-EPNY 216 (954)
Q Consensus 141 ~~~~l~V~krDG~~e-~~d~~ki~~~i~~ac~gL~~v~~~~i~~~~~--~~lydgitt~el~~~li~aA~~Li~~-ePdy 216 (954)
T Consensus 27 ~~~~~~v~k~~g~~~~p~~~~k~~~~v~~a~~~l~~v~~~~v~~~~~~~~q~~dgi~t~~i~~~li~~a~~li~~~~P~y 106 (785)
T PRK09209 27 QNVSTWITKEAGNRKLPFEPERLERAIDQIHAEFPQLDVEDYKRRVFGFVERKDSVNADDLVDLLIREAEARVDLTTPEW 106 (785)
T ss_pred CCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCH
T ss_conf 76535899468874688688999999999965466899999999998188542896199999999999998658779748
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf 46779999999999862100333101104467775478889986655767787777517739999976412101128989
Q gi|254780502|r 217 AKVTARFLLEKLRREVLTTVYKKPQKATHHEMQCLYPEYFCRYIEEGVKARLLHESMMDFDLVYLANDLKYERDFAFEYL 296 (954)
Q Consensus 217 ~~vAaRlll~~l~kev~~~~~~~~~~~~~~~~~~~y~~~f~~~i~~G~~~~~i~~~l~~~dl~~L~~~Id~~RD~~F~Y~ 296 (954)
T Consensus 107 ~~vaarl~~~~l~k~~~~~~~~~~~-----~~~~~~~~~~~~~~~~g~y~~~ll~~y~~~e~~~l~~~id~~RD~~f~Y~ 181 (785)
T PRK09209 107 EHFAARLYLRRLYKRASRNRFYDAS-----QKYGSFVGLQESLADRGIYSNDILRRYSKEELIEAGKMIDPERDKLFTYN 181 (785)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCC-----CCCHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 9999999999999998733366633-----35305999999998754240888875179999999714473543477829
Q ss_pred HHHHHHHHHHHCC-CCCEEECHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCC
Q ss_conf 9999999762114-892753889999999965416454--5368999999999743303586112221002222321102
Q gi|254780502|r 297 GLQILYDRYFLHI-NGSRIEMPQAFFMRVAMGLALKET--EKEKRAVEFYNLLSSFHFMCSTPTLFNSGTRHPQLSSCFL 373 (954)
Q Consensus 297 Gl~tL~~rYllk~-~~~~~E~pQ~~~mrVA~~la~~e~--~~~~~~~~~Y~~ls~~~~~~atPtl~Nagt~~~qlsSCfl 373 (954)
T Consensus 182 g~~~l~~rYl~~~~~~~i~E~PQ~~~m~vAm~l~~~e~~~~r~~~v~~~Y~~lS~~~~~~aTPtL~nagt~~~QlSSCfl 261 (785)
T PRK09209 182 GLYLLATRYLATDSSRGVYELPQERWLTIALYLMQNEPRERRMQLVGEAYWALSNLYMTVATPTLANAGKVGGQLSSCFI 261 (785)
T ss_pred HHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 89999984571778999846579999999999842476677999999999998568635789852068988987341683
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEE
Q ss_conf 54766413589999899999851054441012443111200012787642889999998999997404666772478983
Q gi|254780502|r 374 TTVPDDLYGIFGALQENAMLAKYSGGLGNDWTPVRGLGAHIHGTNGKSQGVIPFLKVANDTAVAVNQGGKRKGAVCAYLE 453 (954)
Q Consensus 374 ~~v~Dsl~~I~~~~~~~a~isk~ggGiG~~~s~iR~~Gs~I~g~~G~ssG~v~flk~~n~~~~~v~QgG~RrGA~~~~l~ 453 (954)
T Consensus 262 ~~vdDsl~sI~~t~~~~a~isk~gGGiG~~~s~IRa~Gs~Irg~~g~ssGvVpf~kv~n~t~~~v~QgG~R~GA~~vyL~ 341 (785)
T PRK09209 262 DTVDDSLQGIYDSNTDVARVSKHGGGVGAYLGYVRSSGSAIRGVKNSSGGVIPWIKQLNNTAVSVDQLGQRKGAIAVYLD 341 (785)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf 35788777999999999986725867864124468799854788884898223999999999998638986662489978
Q ss_pred CCCCCHHHHHHHCCCCCCHHHHHHCCCHHHCCCHHHHHHHHCCCCEEEEECCCCCC-----CCCCCCCC-----HHHHHH
Q ss_conf 56788999973025787302332023202034879999852128747871011444-----10013443-----789987
Q gi|254780502|r 454 TWHIDVEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVTQNAGWTLFSPDEVSD-----LHDLYGKE-----FEIAYE 523 (954)
Q Consensus 454 ~wH~Di~eFl~~k~n~G~~~~r~~~~~~av~i~D~Fm~~v~~~~~w~Lf~P~~~~~-----L~d~~g~~-----fe~~Y~ 523 (954)
T Consensus 342 iwH~DI~eFL~lK~n~Gde~~R~~dl~~av~i~DlFMerv~~~~~w~Lf~P~ev~~~~g~~l~d~~~e~~~~~~f~~~Y~ 421 (785)
T PRK09209 342 IWHKDIEAFLDLRLNNGDQRLRAHDVFTSVCIPDLFMEAVERRGDWYLFDPHEVKRVKGWYLQDFYDEKKGNGSFREKYE 421 (785)
T ss_pred CCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEECHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHHCCCHHHHHHH
T ss_conf 97063999996056677576642137403011999999997199668878331000047427776532302335999999
Q ss_pred HHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCCCCCEEEECCCCCCCCCCCCC---------
Q ss_conf 78752104886057786688999999999988288127833112022212466703404675200136654---------
Q gi|254780502|r 524 NYERQADRGEIKVFRKISAVALWRKMLTMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNSSS--------- 594 (954)
Q Consensus 524 ~~e~~~~~~~~~~~k~i~A~~l~~~i~~~~~etG~P~i~f~D~~N~~~p~~~~g~I~~sNlC~Ei~l~~~~--------- 594 (954)
T Consensus 422 ~~~~d~~i----~kk~I~A~eL~~~Il~~~~ETG~Pyi~f~D~~Nr~sp~~~~G~I~~SNLC~EI~~~~~P~~~~~e~~~ 497 (785)
T PRK09209 422 ECVADERI----SRKTVKAIEIMKRIMVSQLETGNPFMFYRDEVNRKNPNKHEGMVYSSNLCTEILQNMSPTRMIQEIIS 497 (785)
T ss_pred HHHHCCCC----CCEEEEHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99738754----43476299999999999998689637883455535997678967743475113557888643222367
Q ss_pred ----------CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHH
Q ss_conf ----------4332111255406862543447988855899999999765311210001888886443310002111188
Q gi|254780502|r 595 ----------EETAVCNLGSINLLAHFANNQFDYDKLASTIRTAVRVLDNVIDINCHTIEKAKKSNHTHRAIGLGLMGFQ 664 (954)
Q Consensus 595 ----------~e~~vCnL~SiNL~~~v~~~~~D~~~l~~~v~~avr~LDnVId~n~yp~~~~~~~~~~~R~iGlGv~Gla 664 (954)
T Consensus 498 ~~ei~~~~~~Ge~avCnL~SiNL~~~v~~~---~d~l~~~v~~avR~LDnVID~n~yPv~~a~~sn~~~R~IGLGvmGla 574 (785)
T PRK09209 498 GGQIVITKKAGDFVVCNLSSINLGRAVTVG---ADVLERLIPIQVRMLDNVIDLNELPVPQATITNQKYRAIGLGTFGWH 574 (785)
T ss_pred CCCEEECCCCCCEEEEECCCCCHHHHHCCC---CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHCCCCHHHH
T ss_conf 762221146775458624313398873156---01699999999999899772355738999999986124244521699
Q ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHCCHHHCCCCCCCCHHHC
Q ss_conf 99997296323378899999999998577999789875311778876678121387624466300552253345402102
Q gi|254780502|r 665 SALHLLHIPYASPEAVEIADESMEFISFHAISASVELAQERGAYSSFKGSLWDQGVFPIDSIGLLAEVRDELAMNRTSRL 744 (954)
Q Consensus 665 d~L~~~gi~Y~S~ea~~~~~~i~e~i~~~a~~aS~~LAkErG~~~~f~gS~~~~G~~~~d~~~~~~~~~~~~~~~~~~~~ 744 (954)
T Consensus 575 d~Lak~gi~Y~S~eA~~l~~~i~E~I~y~a~~AS~eLAkErG~yp~F~gS~~s~G~~~-~-------------~~~~~~~ 640 (785)
T PRK09209 575 HLLALKGIHWNSEEAEDYADELYERINYLTIQASMELAKEKGAYPVFRGSDWHTGEYF-R-------------RRDYNSP 640 (785)
T ss_pred HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC-C-------------CCCCCCC
T ss_conf 9999859986898999999999999999999999999997589988889821027621-4-------------4677630
Q ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHEEEEECCCCCEEEECHHHHHHHHHCCCCCHHHHHHH
Q ss_conf 72899999998412044301107743687783889884756012034532676136646589998998589868999999
Q gi|254780502|r 745 PWDELKKRVKTIGMRNSNCMAIAPTATIANICGVSQSIDPSYQNLYVKSNMSGDFTVVNSFLVNELKQRDLWDEAMISDL 824 (954)
Q Consensus 745 dW~~Lr~~i~~~G~RNs~l~aiAPT~t~S~i~g~s~gIEP~~a~~y~r~~~~G~~~~vn~~l~~~l~~~g~~~~~~~~~i 824 (954)
T Consensus 641 dW~~Lr~~I~~~GlRNS~l~AiAPT~S~S~I~g~T~gIEP~~~~~y~k~~k~~~~~~~~p~l~----------------- 703 (785)
T PRK09209 641 QWDELAAQVAVNGVRNAYLLAVAPNMSTAQIAGSTASIDPIYSAFYYEEKKDYRRPVTAPDLS----------------- 703 (785)
T ss_pred CHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHCCCCCCCCCCCCHHHEEEECCCEEEEECCCCC-----------------
T ss_conf 699999999884844101132388389999759786418686500014405661578569887-----------------
Q ss_pred HHCCCCCCCCCCCCHHHHHHCCCHHCCCHHHHHHHHHHHCCHHCCCEEEEEEC-CCCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf 85199627764488678865052220688999999985206300523204754-89998999999999997298679796
Q gi|254780502|r 825 KYHDGSIGNIERIPDDLKKIHATAFEIDPMWLIESASRRQKWIDQAQSLNLYL-DEPSGKKLDFIYRQAWLMGLKTTYYL 903 (954)
Q Consensus 825 ~~~~Gsv~~i~~ip~~~k~~f~ta~ei~~~~~i~~~a~~Q~~IDqsiS~tl~~-~~~t~~~i~~~y~~Aw~~GlKt~yy~ 903 (954)
T Consensus 704 -------------~~~~~~y~kta~eId~~~~I~~~A~rQk~IDQsiS~Nl~~~~~~~~~~l~~~yl~Awk~GlKT~YY~ 770 (785)
T PRK09209 704 -------------LETWPYYEKGAYKVDQFASIRQNARRQRHVDQSISFNFYVPSTIRASTLLDLHMTAWREGLKTTYYV 770 (785)
T ss_pred -------------HHHHHHHCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEC
T ss_conf -------------6766653132602798999999998824262011174258999999999999999998294130367
Q ss_pred CCCCC
Q ss_conf 58841
Q gi|254780502|r 904 RSRSA 908 (954)
Q Consensus 904 R~~s~ 908 (954)
T Consensus 771 Rt~~~ 775 (785)
T PRK09209 771 RSNDI 775 (785)
T ss_pred CCCCC
T ss_conf 88888