HHsearch alignment for GI: 254780502 and conserved domain: PRK12365
>PRK12365 ribonucleotide-diphosphate reductase subunit alpha; Provisional.
Probab=100.00 E-value=0 Score=2408.63 Aligned_cols=925 Identities=52% Similarity=0.856 Sum_probs=885.3
Q ss_pred CHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 10211646980289732248679999999999870487764321079999999999999998506678985211454899
Q gi|254780502|r 23 PEKIKGVQVIKRNGGVTSFDPSKISRAIMKAFMAVEGKGASRSIRVQDIIKNLTEQTVTRLLQHNKSALIVHIEDIQDQV 102 (954)
Q Consensus 23 ~~~~~~m~ViKRnG~vv~Fd~~KI~~AI~KAFlav~~~~~~~s~~~~~~v~~lt~~Vv~~i~~~~~~~~~~~VE~IQD~V 102 (954)
T Consensus 112 ~~~~~s~~virRng~vv~f~~~kI~vA~tKAFlav~g~~~a~s~ri~~~v~~lt~~v~~~~~rr~~~gg~~HIEdIQD~V 191 (1046)
T PRK12365 112 KKSWQSLSVIRRDGTSVKFNPMKISAALEKAFRATLKIEGMTPPATLSEINDLTQKIVEEILELCSQEERIDIEEIQDIV 191 (1046)
T ss_pred CCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHH
T ss_conf 58863147994489332668999999999999984598644428899999999999999997528999806300447999
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC--CCCCEEEEECCCCEECCCHHHHHHHHHHHHCCCC-CCCHH
Q ss_conf 99998612089999988909999999987642100002--3442289805997602598999999999851666-68999
Q gi|254780502|r 103 ECSLMQSGHHKITREYVLYREERSDVRAAQSHSKSDAP--IAPKLKIMMDDGTLISFNSKRLEMIVEEACSGLQ-DVSSK 179 (954)
Q Consensus 103 E~~LM~~g~~~VAkaYILYRe~Ra~~R~~~~~~~~~~~--~~~~l~V~krDG~~e~~d~~ki~~~i~~ac~gL~-~v~~~ 179 (954)
T Consensus 192 El~LMr~G~~~VAraYILYReeRa~~R~~k~~~~~~~~~~~~~~~~v~~~dg~~~~ld~~~l~~~~~~ac~~l~~~~~~~ 271 (1046)
T PRK12365 192 EKQLMVVGHYDVAKNYILYREARARVRDNKEEDGQEEFVPQEETYEVLKEDGTTYLITKSQLLARFAWACSRFPETTDAQ 271 (1046)
T ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHH
T ss_conf 99998677099999999989999998987654212112452002110014675255859999999999970244346789
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 99998973037898889999999999998744187714677999999999986210033310110446777547888998
Q gi|254780502|r 180 IVLSETYKNMYDGLSESDLETALIFSSRTLIEKEPNYAKVTARFLLEKLRREVLTTVYKKPQKATHHEMQCLYPEYFCRY 259 (954)
Q Consensus 180 ~i~~~~~~~lydgitt~el~~~li~aA~~Li~~ePdy~~vAaRlll~~l~kev~~~~~~~~~~~~~~~~~~~y~~~f~~~ 259 (954)
T Consensus 272 ~l~~~~~~nlydgi~~~e~~~~~I~aar~lie~eP~y~~vaaRLl~~~~~~e~lg~~------~~~~~~~~~y~~~f~~~ 345 (1046)
T PRK12365 272 LLADMAFANFYSGIKESEVVLACIMAARANIEKEPDYAFVAAELLLDVVYKEALGKS------SQDEDLEEAHKDHFKRY 345 (1046)
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC------CCHHHHHHHHHHHHHHH
T ss_conf 999999862126898899999999989986473771699999999988999873652------33689999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCCC-CCHHH
Q ss_conf 66557677877775177399999764121011289899999999762114892753889999999965416454-53689
Q gi|254780502|r 260 IEEGVKARLLHESMMDFDLVYLANDLKYERDFAFEYLGLQILYDRYFLHINGSRIEMPQAFFMRVAMGLALKET-EKEKR 338 (954)
Q Consensus 260 i~~G~~~~~i~~~l~~~dl~~L~~~Id~~RD~~F~Y~Gl~tL~~rYllk~~~~~~E~pQ~~~mrVA~~la~~e~-~~~~~ 338 (954)
T Consensus 346 i~~g~~~-~l~~~l~~~dl~~l~~ai~~~RD~~f~Y~Gl~tL~dRYl~~~~~~~~E~PQ~~~MrVAmgLa~~e~e~~~~~ 424 (1046)
T PRK12365 346 ILNGEEY-RLNPELKDYDLDALAEALDLSRDQQFSYMGVQNLYDRYFNHHEGRRLETAQIFWMRVSMGLALNEGEKKNFW 424 (1046)
T ss_pred HHHHHHH-CCCHHHHHCCHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 9855653-033656540599998453824022020689999999986314883643508899999988763055216789
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999999743303586112221002222321102547664135899998999998510544410124431112000127
Q gi|254780502|r 339 AVEFYNLLSSFHFMCSTPTLFNSGTRHPQLSSCFLTTVPDDLYGIFGALQENAMLAKYSGGLGNDWTPVRGLGAHIHGTN 418 (954)
Q Consensus 339 ~~~~Y~~ls~~~~~~atPtl~Nagt~~~qlsSCfl~~v~Dsl~~I~~~~~~~a~isk~ggGiG~~~s~iR~~Gs~I~g~~ 418 (954)
T Consensus 425 aiefY~lmS~~~f~~aTPTLfNAGt~~~QLSSCFl~~v~DslegI~~tik~~A~iSK~gGGiG~~~s~vRa~Gs~Ikgt~ 504 (1046)
T PRK12365 425 AITFYNLLSTFRYTPATPTLFNSGMRHSQLSSCYLSTVQDDLVHIYKVISDNAMLSKWAGGIGNDWTAVRATGALIKGTN 504 (1046)
T ss_pred HHHHHHHHHCCEECCCCCEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCCCCCCCC
T ss_conf 99999986437111589700038998877650673378888899999999999987417720221356366898025779
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCHHHHHHCCCHHHCCCHHHHHHHHCCCC
Q ss_conf 87642889999998999997404666772478983567889999730257873023320232020348799998521287
Q gi|254780502|r 419 GKSQGVIPFLKVANDTAVAVNQGGKRKGAVCAYLETWHIDVEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVTQNAG 498 (954)
Q Consensus 419 G~ssG~v~flk~~n~~~~~v~QgG~RrGA~~~~l~~wH~Di~eFl~~k~n~G~~~~r~~~~~~av~i~D~Fm~~v~~~~~ 498 (954)
T Consensus 505 G~SsGvVpflkv~N~ta~aV~QGGkRrGA~a~YLe~WH~DIeeFLdlRkn~Gde~~Ra~dln~avwIpDlFMkrVe~d~~ 584 (1046)
T PRK12365 505 GKSQGVIPFIKVANDTAIAVNQGGKRKGAMCVYLEVWHLDYEDFLELRKNTGDERRRTHDINTASWIPDLFFKRLEQKGT 584 (1046)
T ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHCCCCCCHHHHHCCCCCHHCCCHHHHHHHHCCCC
T ss_conf 84788000899999999999728976660378856761259999972356881766431481022479999999975996
Q ss_pred EEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCCCCCCE
Q ss_conf 47871011444100134437899877875210488605778668899999999998828812783311202221246670
Q gi|254780502|r 499 WTLFSPDEVSDLHDLYGKEFEIAYENYERQADRGEIKVFRKISAVALWRKMLTMLFETGHPWITFKDPCNIRSPQQHVGV 578 (954)
Q Consensus 499 w~Lf~P~~~~~L~d~~g~~fe~~Y~~~e~~~~~~~~~~~k~i~A~~l~~~i~~~~~etG~P~i~f~D~~N~~~p~~~~g~ 578 (954)
T Consensus 585 W~Lf~P~e~p~L~d~yG~eFek~Y~~yE~~~~~geik~~k~V~Ar~Lw~kIl~s~~ETG~Pyi~FkD~~N~~spq~h~G~ 664 (1046)
T PRK12365 585 WTLFSPDDVPGLHEAYGEEFEKLYEEYERKVDTGEIRLYKKVEAEDLWRKMLSMLYETGHPWMTFKDPSNIRSAQDHVGV 664 (1046)
T ss_pred EEEECHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCE
T ss_conf 47658222565878887899999999986312565422506519999999999999738884685252346676667671
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
Q ss_conf 34046752001366544332111255406862543447988855899999999765311210001888886443310002
Q gi|254780502|r 579 VHSSNLCTEITLNSSSEETAVCNLGSINLLAHFANNQFDYDKLASTIRTAVRVLDNVIDINCHTIEKAKKSNHTHRAIGL 658 (954)
Q Consensus 579 I~~sNlC~Ei~l~~~~~e~~vCnL~SiNL~~~v~~~~~D~~~l~~~v~~avr~LDnVId~n~yp~~~~~~~~~~~R~iGl 658 (954)
T Consensus 665 I~sSNLCtEI~l~tse~EtAVCNLgSINL~~~v~~~~~D~ekL~~tv~~avR~LDNVIDiN~YPv~eA~~sN~r~RpIGL 744 (1046)
T PRK12365 665 VRCSNLCTEILLNCSESETAVCNLGSINLVEHIRNDGLDEEKLSETISIAIRILDNVIDLNFYPTPEAKEANLTHRAVGL 744 (1046)
T ss_pred EEECCCCCCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCC
T ss_conf 54046566612258997623643563125551566777899999999999998888777336875689999874213021
Q ss_pred CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHCCHHHCCC--C
Q ss_conf 11118899997296323378899999999998577999789875311778876678121387624466300552253--3
Q gi|254780502|r 659 GLMGFQSALHLLHIPYASPEAVEIADESMEFISFHAISASVELAQERGAYSSFKGSLWDQGVFPIDSIGLLAEVRDE--L 736 (954)
Q Consensus 659 Gv~Glad~L~~~gi~Y~S~ea~~~~~~i~e~i~~~a~~aS~~LAkErG~~~~f~gS~~~~G~~~~d~~~~~~~~~~~--~ 736 (954)
T Consensus 745 GVMGlaD~L~~lgIpy~SeEA~~f~dkifE~I~y~Ai~AS~eLAkERG~Y~sf~GS~ws~G~lp~D~~~ll~~~rg~~~~ 824 (1046)
T PRK12365 745 GVMGFQDALYKLNISYASQEAVEFADYSSELIAYYAILASSLLAKERGTYSSYKGSKWDRGYLPLDTIELLKEYRGEHNV 824 (1046)
T ss_pred CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC
T ss_conf 25589999998699968999999999999999999999999999985888667898442785671157778874276554
Q ss_pred CCCCHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCHHEEEEECCCCCEEEECHHHHHHHHHCCCC
Q ss_conf 45402102728999999984120443011077436877838898847560120345326761366465899989985898
Q gi|254780502|r 737 AMNRTSRLPWDELKKRVKTIGMRNSNCMAIAPTATIANICGVSQSIDPSYQNLYVKSNMSGDFTVVNSFLVNELKQRDLW 816 (954)
Q Consensus 737 ~~~~~~~~dW~~Lr~~i~~~G~RNs~l~aiAPT~t~S~i~g~s~gIEP~~a~~y~r~~~~G~~~~vn~~l~~~l~~~g~~ 816 (954)
T Consensus 825 ~~d~s~~~DW~~Lr~~Ik~~GmRNS~l~AIAPTASiS~I~G~s~sIEP~~sNiy~r~~lsGeF~vvN~~Lv~dLk~~glW 904 (1046)
T PRK12365 825 LMDTSSRKDWTPVRSLIKEYGMRNSQLMAIAPTATISNIIGVTQSIEPTYKHLFVKSNLSGEFTIPNVYLIEKLKKLGLW 904 (1046)
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCCCCEEECCHHHHHHHCCCCCCCCCHHHHHEEEECCCCEEEEECHHHHHHHHHCCCC
T ss_conf 55876654709999999981964123244576388899738872326104433143025641698778999999974899
Q ss_pred CHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCHHCCCHHHHHHHHHHHCCHHCCCEEEEEECCCCCHHHHHHHHHHHHHCC
Q ss_conf 68999999851996277644886788650522206889999999852063005232047548999899999999999729
Q gi|254780502|r 817 DEAMISDLKYHDGSIGNIERIPDDLKKIHATAFEIDPMWLIESASRRQKWIDQAQSLNLYLDEPSGKKLDFIYRQAWLMG 896 (954)
Q Consensus 817 ~~~~~~~i~~~~Gsv~~i~~ip~~~k~~f~ta~ei~~~~~i~~~a~~Q~~IDqsiS~tl~~~~~t~~~i~~~y~~Aw~~G 896 (954)
T Consensus 905 ~~~m~~~i~~~~GSvq~I~~IP~~lK~lYkTA~EIdq~wlI~~AA~Rqk~IDQsQSlNLy~~~p~~~kL~~~y~~AWk~G 984 (1046)
T PRK12365 905 DADMLDDLKYFDGSLLEIERIPDHLKKIFLTAFEIEPEWIIECASRRQKWIDMGQSLNLYLAEPDGKKLSNMYLTAWKKG 984 (1046)
T ss_pred CHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCEECCHHHHHHHHHHHCCCCCHHHCCEEECCCCCHHHHHHHHHHHHHCC
T ss_conf 79999999863998457666898999752200225899999998862575330110000017998779999999999738
Q ss_pred CCEEEEECCCCCHHHHHHCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 86797965884111121012444432----11123455555543234542236888500069
Q gi|254780502|r 897 LKTTYYLRSRSATSVEKSTLKGVDGK----LNAVPVTDPNSSTHSLGIPSSCTSDTECEVCQ 954 (954)
Q Consensus 897 lKt~yy~R~~s~~~~ek~t~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~p~CeaCq 954 (954)
T Consensus 985 LKTtYYLRs~~at~~ekst~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ceacq 1046 (1046)
T PRK12365 985 LKTTYYLRSSAATSVEKSFIDINKRGIQPRWMKNKSASTSIVVERAKKTPVCSLEEGCESCQ 1046 (1046)
T ss_pred CCCEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 76022205663220566433045556574223454445444456677898576898751146