HHsearch alignment for GI: 254780502 and conserved domain: PRK12365
>PRK12365 ribonucleotide-diphosphate reductase subunit alpha; Provisional.
Probab=99.79 E-value=4.1e-18 Score=153.23 Aligned_cols=192 Identities=22% Similarity=0.358 Sum_probs=146.1
Q ss_pred HHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC--CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Q ss_conf 2116469802897322486799999999998704877--64321079999999999999998506678985211454899
Q gi|254780502|r 25 KIKGVQVIKRNGGVTSFDPSKISRAIMKAFMAVEGKG--ASRSIRVQDIIKNLTEQTVTRLLQHNKSALIVHIEDIQDQV 102 (954)
Q Consensus 25 ~~~~m~ViKRnG~vv~Fd~~KI~~AI~KAFlav~~~~--~~~s~~~~~~v~~lt~~Vv~~i~~~~~~~~~~~VE~IQD~V 102 (954)
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (1046)
T PRK12365 5 QEKHYTIVKRNGMFVPFNQDRIFQALEAAFRDTRSLEDHSPLPKDLEESIRSITHQVVKEVVQKITEGQVVTVERIQDMV 84 (1046)
T ss_pred HHHEEEEEEECCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHH
T ss_conf 00014788436755126487899999998610102356899847699999999999999999973178578728999998
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEECCCHHHHHHHHHHHHCCCCC---CCHH
Q ss_conf 9999861208999998890999999998764210000234422898059976025989999999998516666---8999
Q gi|254780502|r 103 ECSLMQSGHHKITREYVLYREERSDVRAAQSHSKSDAPIAPKLKIMMDDGTLISFNSKRLEMIVEEACSGLQD---VSSK 179 (954)
Q Consensus 103 E~~LM~~g~~~VAkaYILYRe~Ra~~R~~~~~~~~~~~~~~~l~V~krDG~~e~~d~~ki~~~i~~ac~gL~~---v~~~ 179 (954)
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~s~~virRng~vv~f~~~kI~vA~tKAFlav~g~~~a~s~ 155 (1046)
T PRK12365 85 ESQLYVNGLQDVARDYIVYRDQRKAHRKKS---------WQSLSVIRRDGTSVKFNPMKISAALEKAFRATLKIEGMTPP 155 (1046)
T ss_pred HHHHHHHHHHHHHHHHEEEHHHHHHHHCCC---------CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCH
T ss_conf 877767567887643445500457762588---------63147994489332668999999999999984598644428
Q ss_pred HH-------HH----HHHHHCCCC--CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf 99-------99----897303789--88899999999999987441877146779999999999
Q gi|254780502|r 180 IV-------LS----ETYKNMYDG--LSESDLETALIFSSRTLIEKEPNYAKVTARFLLEKLRR 230 (954)
Q Consensus 180 ~i-------~~----~~~~~lydg--itt~el~~~li~aA~~Li~~ePdy~~vAaRlll~~l~k 230 (954)
T Consensus 156 ri~~~v~~lt~~v~~~~~rr~~~gg~~HIEdIQD~V-----El~LMr~G~~~VAraYILYReeR 214 (1046)
T PRK12365 156 ATLSEINDLTQKIVEEILELCSQEERIDIEEIQDIV-----EKQLMVVGHYDVAKNYILYREAR 214 (1046)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHH-----HHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 899999999999999997528999806300447999-----99998677099999999989999