>TIGR02510 NrdE-prime ribonucleoside-diphosphate reductase, alpha chain; InterPro: IPR013350 Proteins in this entry represent a small clade of ribonucleoside-diphosphate reductase alpha chains which are sufficiently divergent from the usual Class I ribonucleotide reductase (RNR) alpha chains (NrdE or NrdA, IPR013346 from INTERPRO) to form a distinct group. The genes from Thermus thermophilus, Dichelobacter and Salinibacter are adjacent to the usual RNR beta chain..

Probab=100.00 E-value=0 Score=873.61 Aligned_cols=509 Identities=33% Similarity=0.479 Sum_probs=468.3 Q ss_pred HHHHHHHHHHHCCCCCEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCC Q ss_conf 99999997621148927538899999999654164545368999999999743303586112221002222321102547 Q gi|254780502|r 297 GLQILYDRYFLHINGSRIEMPQAFFMRVAMGLALKETEKEKRAVEFYNLLSSFHFMCSTPTLFNSGTRHPQLSSCFLTTV 376 (954) Q Consensus 297 Gl~tL~~rYllk~~~~~~E~pQ~~~mrVA~~la~~e~~~~~~~~~~Y~~ls~~~~~~atPtl~Nagt~~~qlsSCfl~~v 376 (954) T Consensus 22 ~r~~~rrgYll~-----G~~v~~rvr~iA~~~e~l~-~~~gf~~rf~ey~arG~yslAtPvwaN~GldRGlPiSC~GsYv 95 (560) T TIGR02510 22 GRSYLRRGYLLK-----GETVEDRVREIASTAEKLD-KVEGFEERFFEYLARGKYSLATPVWANYGLDRGLPISCYGSYV 95 (560) T ss_pred HHHHHHCCCCCC-----CCCHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCEEEECCCC T ss_conf 788865164578-----9776678999999998511-4740467889999840466326133305767897324304752 Q ss_pred CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC Q ss_conf 66413589999899999851054441012443111200012787642889999998999997404666772478983567 Q gi|254780502|r 377 PDDLYGIFGALQENAMLAKYSGGLGNDWTPVRGLGAHIHGTNGKSQGVIPFLKVANDTAVAVNQGGKRKGAVCAYLETWH 456 (954) Q Consensus 377 ~Dsl~~I~~~~~~~a~isk~ggGiG~~~s~iR~~Gs~I~g~~G~ssG~v~flk~~n~~~~~v~QgG~RrGA~~~~l~~wH 456 (954) T Consensus 96 ~Ds~~~il~~~aEVgM~~K~GgGTs~YlGd~RPRGa~I~-~nG~sNg~~~fa~lFD~~inv~~~g~tRRG~~AgY~D~eH 174 (560) T TIGR02510 96 DDSVLDILEGQAEVGMMAKNGGGTSSYLGDIRPRGADIS-TNGESNGAYGFASLFDKVINVVTQGATRRGEFAGYVDVEH 174 (560) T ss_pred CHHHHHHHCCCCCEEEEECCCCCHHHCCCCCCCCCCCCC-CCCCCCCCCCCCEECCCEEEEEECCCCCCCCCEEEEECCC T ss_conf 101898851243111220567640100366477889765-7875666445300013224420057877654102563357 Q ss_pred CCHHHHHHHCCCCCCHHHHHHCCCHHHCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEE Q ss_conf 88999973025787302332023202034879999852128747871011444100134437899877875210488605 Q gi|254780502|r 457 IDVEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVTQNAGWTLFSPDEVSDLHDLYGKEFEIAYENYERQADRGEIKV 536 (954) Q Consensus 457 ~Di~eFl~~k~n~G~~~~r~~~~~~av~i~D~Fm~~v~~~~~w~Lf~P~~~~~L~d~~g~~fe~~Y~~~e~~~~~~~~~~ 536 (954) T Consensus 175 pD~eEwl~i~~~~~----a~~~~~wgv~~gD~W~E~~~agD~-------------------------------------- 212 (560) T TIGR02510 175 PDLEEWLGIQLEND----AVQSLGWGVEVGDDWLEKMIAGDP-------------------------------------- 212 (560) T ss_pred CCHHHHHHHHCCCC----CCEEEEEEEEECCHHHHHHHCCCC-------------------------------------- T ss_conf 75898753211588----502788888856416888643781-------------------------------------- Q ss_pred EEEEEHHHHHHHHHHHHHHHCCCEEEEECHHHCCCCC--CCCC-EEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC Q ss_conf 7786688999999999988288127833112022212--4667-034046752001366544332111255406862543 Q gi|254780502|r 537 FRKISAVALWRKMLTMLFETGHPWITFKDPCNIRSPQ--QHVG-VVHSSNLCTEITLNSSSEETAVCNLGSINLLAHFAN 613 (954) Q Consensus 537 ~k~i~A~~l~~~i~~~~~etG~P~i~f~D~~N~~~p~--~~~g-~I~~sNlC~Ei~l~~~~~e~~vCnL~SiNL~~~v~~ 613 (954) T Consensus 213 ----ekrArWa~~~~sRa~~G~pY~~fr~~an~~aPqv~k~~G~~i~aS~LCtEIaLPS~~~esFvC~LSSlN~l~y--- 285 (560) T TIGR02510 213 ----EKRARWAKLLKSRARVGIPYLLFRDNANELAPQVIKNSGIDIRASNLCTEIALPSDDEESFVCCLSSLNVLHY--- 285 (560) T ss_pred ----HHHHHHHHHHHHHHHHCCCCEEECCCHHCCCCHHHHHCCCCEEECCCCCEECCCCCCCCCEEHHHHHHHHHHH--- T ss_conf ----1578999999999841886133222020026478784789076524211013787788424505665105553--- Q ss_pred CCCCHHHH--HHHHHHHHHHHHHHCC--------CCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHH Q ss_conf 44798885--5899999999765311--------2100018888864433100021111889999729632337889999 Q gi|254780502|r 614 NQFDYDKL--ASTIRTAVRVLDNVID--------INCHTIEKAKKSNHTHRAIGLGLMGFQSALHLLHIPYASPEAVEIA 683 (954) Q Consensus 614 ~~~D~~~l--~~~v~~avr~LDnVId--------~n~yp~~~~~~~~~~~R~iGlGv~Glad~L~~~gi~Y~S~ea~~~~ 683 (954) T Consensus 286 -----de~kDtDav~tlv~FLDsV~~eFi~kAkg~~y--~~rAvRFaer~RAiGlG~LGwHsYLQsnrIpfES~eA~~~n 358 (560) T TIGR02510 286 -----DEWKDTDAVETLVRFLDSVLSEFIEKAKGLSY--MERAVRFAERARAIGLGVLGWHSYLQSNRIPFESGEAHLLN 358 (560) T ss_pred -----HCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCH--HHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHH T ss_conf -----04543036899999998899999875216823--67898887511020235556666654045443587887632 Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHCCHHHCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH Q ss_conf 99999985779997898753117788766781213876244663005522533454021027289999999841204430 Q gi|254780502|r 684 DESMEFISFHAISASVELAQERGAYSSFKGSLWDQGVFPIDSIGLLAEVRDELAMNRTSRLPWDELKKRVKTIGMRNSNC 763 (954) Q Consensus 684 ~~i~e~i~~~a~~aS~~LAkErG~~~~f~gS~~~~G~~~~d~~~~~~~~~~~~~~~~~~~~dW~~Lr~~i~~~G~RNs~l 763 (954) T Consensus 359 aei~k~Ik~raeeaSreLa~r~gEp~v~~g------------------------------------------~grRNATl 396 (560) T TIGR02510 359 AEIYKTIKERAEEASRELAERYGEPEVLEG------------------------------------------KGRRNATL 396 (560) T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------------------------------------------CCCCHHHH T ss_conf 389999999999987999973879875565------------------------------------------77621556 Q ss_pred CCCCCCHHHHHHHC-CCCCCCCCCHHEEEEECCCCCEEEECHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCHHHH Q ss_conf 11077436877838-89884756012034532676136646589998998589868999999851996277644886788 Q gi|254780502|r 764 MAIAPTATIANICG-VSQSIDPSYQNLYVKSNMSGDFTVVNSFLVNELKQRDLWDEAMISDLKYHDGSIGNIERIPDDLK 842 (954) Q Consensus 764 ~aiAPT~t~S~i~g-~s~gIEP~~a~~y~r~~~~G~~~~vn~~l~~~l~~~g~~~~~~~~~i~~~~Gsv~~i~~ip~~~k 842 (954) T Consensus 397 ~aiAPtkSSafilGqVSpsiEP~~sNyf~qd~~k~~v~~kNP~L~~vL~ekg~D~e~vwd~i~~hnGSVQHLD~LtDeEK 476 (560) T TIGR02510 397 LAIAPTKSSAFILGQVSPSIEPLVSNYFIQDSNKGKVVYKNPVLAKVLKEKGKDQELVWDIITYHNGSVQHLDFLTDEEK 476 (560) T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCEEECCCCCCCCC T ss_conf 55410035788724647774665331467765326753147279999873167778999999872797632223443310 Q ss_pred HHCCCHHCCCHHHHHHHHHHHCCHHCCCEEEEEEC-C-CCCHHHHHHHHHHHHHCCCCEEEEECCCCCHH Q ss_conf 65052220688999999985206300523204754-8-99989999999999972986797965884111 Q gi|254780502|r 843 KIHATAFEIDPMWLIESASRRQKWIDQAQSLNLYL-D-EPSGKKLDFIYRQAWLMGLKTTYYLRSRSATS 910 (954) Q Consensus 843 ~~f~ta~ei~~~~~i~~~a~~Q~~IDqsiS~tl~~-~-~~t~~~i~~~y~~Aw~~GlKt~yy~R~~s~~~ 910 (954) T Consensus 477 ~VFKTf~EIsQ~aii~lAa~RQkHIDQ~QSlNL~i~p~e~p~~d~n~l~~~aw~~glKsLYY~~s~~~a~ 546 (560) T TIGR02510 477 SVFKTFAEISQMAIIRLAAARQKHIDQAQSLNLVISPDEKPSKDVNVLRVFAWKKGLKSLYYQRSERGAQ 546 (560) T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHCEECCCCCCCHHHEEEEEEECCCCCHHHHHHHCCCHHH T ss_conf 0321144421889999875305400022032101468988743010000021368741244453120332

HHsearch alignment for GI: 254780502 and conserved domain: TIGR02510