HHsearch alignment for GI: 254780502 and conserved domain: pfam03477

Probab=99.77  E-value=2.8e-18  Score=154.45  Aligned_cols=88  Identities=35%  Similarity=0.453  Sum_probs=76.6

Q ss_pred             CEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             46980289732248679999999999870487764321079999999999999998506678985211454899999986
Q gi|254780502|r   29 VQVIKRNGGVTSFDPSKISRAIMKAFMAVEGKGASRSIRVQDIIKNLTEQTVTRLLQHNKSALIVHIEDIQDQVECSLMQ  108 (954)
Q Consensus        29 m~ViKRnG~vv~Fd~~KI~~AI~KAFlav~~~~~~~s~~~~~~v~~lt~~Vv~~i~~~~~~~~~~~VE~IQD~VE~~LM~  108 (954)
T Consensus         1 ~~ViKRdG~~~~Fd~~KI~~ai~~A~~~~~~--------~~~~~~~i~~~V~~~l~~~~~--~~i~~e~Iqd~Ve~~L~~   70 (89)
T pfam03477         1 MKVIKRDGRREPFDREKIRRAIEKACEKREV--------DPDDAEEIAEEVEKELEDGGD--REISTEEIQDLVEKTLAE   70 (89)
T ss_pred             CEEEECCCCEECCCHHHHHHHHHHHHHHCCC--------CHHHHHHHHHHHHHHHHHCCC--CCCCHHHHHHHHHHHHHC
T ss_conf             9689389977464089999999999872267--------688899999999999998389--876799999999999981


Q ss_pred             CCCHHHHHHHHHHHHHHH
Q ss_conf             120899999889099999
Q gi|254780502|r  109 SGHHKITREYVLYREERS  126 (954)
Q Consensus       109 ~g~~~VAkaYILYRe~Ra  126 (954)
T Consensus        71 ~~~~~~a~~yi~yR~~r~   88 (89)
T pfam03477        71 HPDYAVARAYILYRNLRK   88 (89)
T ss_pred             CCHHHHHHHHHHHHHHHC
T ss_conf             687999999999999852