HHsearch alignment of GI: 254780503 and MMDB domain: 2d3a_A_105-356

>2d3a_A (A:105-356) Glutamine synthetase; ligase; HET: P3S ADP; 2.63A {Zea mays} PDB: 2d3b_A* 2d3c_A*
Probab=100.00  E-value=0  Score=493.29  Aligned_cols=244  Identities=18%  Similarity=0.161  Sum_probs=218.9

Q ss_pred             CHHHHHHHHHHHHHCCCCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             25777899999861027640232244179982167888877787788887766787777665442899999899767863
Q gi|254780503|r  126 TPRNVLKRVLNFYAQNELKPIIAPEIEFYLIAKNEDPDYPLQPPKGRSGRSILGGQSYSIMGINEFDEIIDDIWKFSEKQ  205 (461)
Q Consensus       126 ~PR~iLkr~i~~l~~~G~~~~~g~E~EF~L~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~i~~~l~~~  205 (461)
                      |||++|||++++++++|+++++|+|+|||||+++++....  ........+...+.+|++.+.++.++++++|++.|+.+
T Consensus         1 DPR~~L~~~~~~~~~~G~~~~~g~E~EF~l~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~   78 (252)
T 2d3a_A            1 NKRYSAAKIFSSPEVAAEEPWYGIEQEYTLLQKDTNWPLG--WPIGGFPGPQGPYYCGIGAEKSFGRDIVDAHYKACLYA   78 (252)
T ss_dssp             CCHHHHHHHHHSHHHHHHCCEEEEEEEEEEEETTTCCBTT--SCTTSBCSCSSSCTTCCSTTTCCCHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHCCCCEEECCCEEEEEEECCCCCCCC--CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf             6278899999998746980676141389985135678887--65457875446754554310013367899999877631


Q ss_pred             HCCHHHHHCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCC-CCHHHHHHHHHHHCCCCCC
Q ss_conf             110221010127864201112665211378999999999999863066033112321135-6626899987631368742
Q gi|254780503|r  206 GLEIDTLIHEEGPAQFEINIRHGDPLKLADQVFLFKRTIREAAFKHDIYATFMAKPMQNY-PGSAMHIHQSVLDIKSNQN  284 (461)
Q Consensus       206 Gi~ve~~~~E~gpGQ~Ei~~~~~~~l~aaD~~~~~k~~ik~vA~~~G~~atFmpKP~~~~-~GsG~H~h~SL~d~~~g~n  284 (461)
                      ||+|+++|+|+|||||||++.|++++++||+++++|++||+||++||+.|||||||+.+. .|||+|+|+|+||.. +  
T Consensus        79 Gi~v~~~~~E~g~gQ~Ei~l~~~~~l~aaD~~~~~r~~ik~vA~~hgl~atFmpKP~~~~~~~~~~h~h~s~~~~~-~--  155 (252)
T 2d3a_A           79 GINISGINGEVMPGQWEFQVGPSVGISSGDQVWVARYILERITEIAGVVVTFDPKPIPGDWNGAGAHTNYSTESMR-K--  155 (252)
T ss_dssp             TCCEEEEEECSSTTEEEEEEEEEETHHHHHHHHHHHHHHHHHHHHHTEEEECCSCSSCSSSCCCBEEEEEECTTTS-S--
T ss_pred             CCCCCCCCCCCCCCCEEEEEECCCHHCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEECCCCCC-C--
T ss_conf             6453422236688637998621410012148999999999999982988996204555777777027640121356-5--


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCC--CCCCCCCCCCCCCCCEEEEECCC--CCCCCEEEE
Q ss_conf             33588655215666545777642232122207661013442046--55754334243345003650223--886520353
Q gi|254780503|r  285 IFSNPDGSETDNFRYFIGGLQKYIPNALVMLAPYGNSYRRLVLD--MGCPVNNAWGYDNRTTAFRIPFS--DAKTKRIEN  360 (461)
Q Consensus       285 ~f~~~~~~ls~~~~~fiaGil~h~~al~a~~~PtvNSYkRl~p~--~~ap~~~~WG~~NR~~~iRip~~--~~~~~riE~  360 (461)
                              .+....++++||+.|+++++++++|++|||+||+++  +|||++++||.+||+++||||.+  ++.++|||+
T Consensus       156 --------~~~~~~~~~~~i~~~~~~~~a~~a~~~~sy~r~~~~~~~~ap~~~~WG~~NR~~~vRv~~~~~~~~~~r~E~  227 (252)
T 2d3a_A          156 --------EGGYEVIKAAIEKLKLRHKEHIAAYGEGNERRLTGRHETADINTFSWGVANRGASVRVGRETEQNGKGYFED  227 (252)
T ss_dssp             --------TTHHHHHHHHHHHHHHTHHHHHTTSCTTHHHHCSSSSSCCCTTCCCEESSCTTSSEECCHHHHHTTCCCEEE
T ss_pred             --------CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCEEECCCCCEEEEECCCCCCCCCEEEEE
T ss_conf             --------422355899999988867888722578606654698657887732772467877798577778787628997


Q ss_pred             ECCCCCCCHHHHHHHHHHHHHH
Q ss_conf             0358779989999999999999
Q gi|254780503|r  361 RLPSSDTNPYLVLAASLACGLL  382 (461)
Q Consensus       361 R~~d~~aNPYL~laail~agl~  382 (461)
                      |++|++|||||++|++|+||||
T Consensus       228 R~~d~~aNPYl~laa~laagLd  249 (252)
T 2d3a_A          228 RRPASNMDPYVVTSMIAETTIV  249 (252)
T ss_dssp             CCCBTTCCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCHHHHHHHHHHHHCC
T ss_conf             9877877899999999997564