HHsearch results for GI: 254780503 and protein with PDBid: 1f52_A
>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A
Probab=100.00 E-value=0 Score=888.96 Aligned_cols=432 Identities=28% Similarity=0.422 Sum_probs=384.6
Q ss_pred CHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEHHHHHHC-CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 98999999971798399999978898331267619887301-56773610000024277434665557788877899960
Q gi|254780503|r 16 NWEQAAKWLKDNRIEDVECITPDLAGIPRGKMMPSSKFISN-IPLTVPSAIYRHTISGESLHSPYLFHNERDGDLRLSPD 94 (461)
Q Consensus 16 ~~~~v~~~l~~~~I~~V~v~~~Dl~G~~RgK~vp~~~f~~~-~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~l~PD 94 (461)
+.++|+++|++++|+||+++|+|++|++|||.||+++|.+. ...|+ .++|+++.+ +...+++|++++||
T Consensus 1 s~e~v~~~l~~~~i~~V~~~~~Dl~G~~R~k~ip~~~~~~~~~~~G~-------~fdgssi~g---~~~~~~sD~~l~PD 70 (468)
T 1f52_A 1 SAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGK-------MFDGSSIGG---WKGINESDMVLMPD 70 (468)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEEEGGGCCHHHHHHCE-------EEEGGGSTT---SCCSSCCEEEEEEC
T ss_pred CHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCC-------CCCCCCCCC---CCCCCCCCEEEEEC
T ss_conf 97999999998898399999999999878999829997699985898-------656225257---67799889899982
Q ss_pred CCCCEECCCCCCCEEEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCCCCC--EEECCCCCEEEEECCCCCCC-------
Q ss_conf 01245387888770999974033575-212342577789999986102764--02322441799821678888-------
Q gi|254780503|r 95 LSTLSIVPWEMDPTAQIVCDVVDYNG-KEVTYTPRNVLKRVLNFYAQNELK--PIIAPEIEFYLIAKNEDPDY------- 164 (461)
Q Consensus 95 ~~Tl~~lPw~~~~~a~vl~~~~~~dG-~p~~~~PR~iLkr~i~~l~~~G~~--~~~g~E~EF~L~~~~~~~~~------- 164 (461)
++|++++||..+.++.|+|++++.++ .|+..|||++|++++++++++|+. +.+|+|+|||+|+.......
T Consensus 71 ~sT~~~~Pw~~~~~~~v~cd~~~~~~~~p~~~~PR~~l~~~~~~~~~~G~~~~~~~~~E~ef~l~~~~~~~~~~~~~~~~ 150 (468)
T 1f52_A 71 ASTAVIDPFFADSTLIIRCDILEPGTLQGYDRDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVA 150 (468)
T ss_dssp GGGCEECSSCSSCEEEEEEEEECTTTCCCCTTCHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEE
T ss_pred CCCEEECCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
T ss_conf 78408898689862899999863676788778855899999999987599642341455699963143346787887454
Q ss_pred ------C----CCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCC-CCCCCEEECCCCCHH
Q ss_conf ------7----778778-8887766787777665442899999899767863110221010127-864201112665211
Q gi|254780503|r 165 ------P----LQPPKG-RSGRSILGGQSYSIMGINEFDEIIDDIWKFSEKQGLEIDTLIHEEG-PAQFEINIRHGDPLK 232 (461)
Q Consensus 165 ------~----~~~~~~-~~~~~~~~~~~y~~~~~~~~~~~l~~i~~~l~~~Gi~ve~~~~E~g-pGQ~Ei~~~~~~~l~ 232 (461)
+ .....+ ...++...+++|++...+...++++++++.|+++||+||++|+|+| +||+||++.|+++|+
T Consensus 151 ~~~~e~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~ve~~~~E~~~~GQ~Ei~~~~~d~L~ 230 (468)
T 1f52_A 151 IDDIEGAWNSSTKYEGGNKGHRPGVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTK 230 (468)
T ss_dssp EECTTCGGGGGCCCTTCCCCCCCCTTCCSSBCTTSSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHH
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCHHH
T ss_conf 57622245778766678867510478871232664206779999999999739872110126567861887056775555
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 378999999999999863066033112321135662689998763136874233588-6552156665457776422321
Q gi|254780503|r 233 LADQVFLFKRTIREAAFKHDIYATFMAKPMQNYPGSAMHIHQSVLDIKSNQNIFSNP-DGSETDNFRYFIGGLQKYIPNA 311 (461)
Q Consensus 233 aaD~~~~~k~~ik~vA~~~G~~atFmpKP~~~~~GsG~H~h~SL~d~~~g~n~f~~~-~~~ls~~~~~fiaGil~h~~al 311 (461)
+||+++++|++||+||++||++|||||||+.+.+|||||+|+|||+ +|+|+|+++ .+++|+++++||||||+|+|++
T Consensus 231 aAD~~~~~K~~vk~iA~~~Gl~ATFmpKP~~~~~GsG~H~H~Sl~~--~g~n~f~~~~~~~lS~~~~~~iaGlL~h~~~l 308 (468)
T 1f52_A 231 KADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLAK--NGTNLFSGDKYAGLSEQALYYIGGVIKHAKAI 308 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEE--TTEETTBCSSGGGBCHHHHHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEECC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 4679999999999999961964688401268888874379998358--99606689887772899999999999863766
Q ss_pred HHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECC-CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 222076610134420465575433424334500365022-3886520353035877998999999999999989846888
Q gi|254780503|r 312 LVMLAPYGNSYRRLVLDMGCPVNNAWGYDNRTTAFRIPF-SDAKTKRIENRLPSSDTNPYLVLAASLACGLLGILQKIEP 390 (461)
Q Consensus 312 ~a~~~PtvNSYkRl~p~~~ap~~~~WG~~NR~~~iRip~-~~~~~~riE~R~~d~~aNPYL~laail~agl~Gi~~~l~p 390 (461)
++|+|||+||||||+|++|||+++|||++||+++||||. ++++++|||+|+||++|||||++||+|+|||+||+++++|
T Consensus 309 ~a~~~PtvNSYkRl~p~~~AP~~~~WG~~NR~~~iRip~~~~~~~~riE~R~~da~aNPYL~lAa~laagl~Gi~~~l~p 388 (468)
T 1f52_A 309 NALANPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHP 388 (468)
T ss_dssp HHHHSCSGGGGGTSSSCSSCCCEEEEESSCTTEEEECCCCSCGGGCCEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHCCCCHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 60555881564167898758863352222584207815578987615784379987698999999999999999837999
Q ss_pred CCCCCCCCCC-------CHHCCCCCHHHHHHHHHCCHHHHH---HCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 7433453000-------311047898999999865989887---35589999999999999999863899789987631
Q gi|254780503|r 391 TPPTMKSANQ-------EAINLPRGLLEAVTLLENTSHFKD---IFGSQFIDMYANLKRNEFETFMQVISPWEREFLLL 459 (461)
Q Consensus 391 ~~~~~~~~~~-------~~~~LP~sL~eAl~~l~~d~~l~~---~lg~~~v~~~~~~k~~E~~~~~~~vt~wE~~~yl~ 459 (461)
++|+.+|+|+ +.++||+||.|||++|++|+.+++ +||++||++|+++||+||++|++.||+||+++||.
T Consensus 389 ~~p~~~~~~~~~~~~~~~~~~LP~sl~eAl~~l~~d~~~~~a~~~fg~~~v~~~~~~K~~E~~~~~~~vt~wE~~~Y~~ 467 (468)
T 1f52_A 389 GEPMDKNLYDLPPEEAKEIPQVAGSLEEALNALDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYS 467 (468)
T ss_dssp CSCCCSCCSSSCCSSTTCCCBCCSSHHHHHHHHHHTCHHHHGGGSSCHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHTT
T ss_pred CCCCCCCHHHCCHHHHHCHHCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
T ss_conf 9867788144998676131016137999999997396988865515699999999999999999977999999974068