HHsearch results for GI: 254780503 and protein with PDBid: 1f52_A

>1f52_A Glutamine synthetase; ADP, MPD, ligase; HET: ADP; 2.49A {Salmonella typhimurium} SCOP: d.15.9.1 d.128.1.1 PDB: 1f1h_A* 1fpy_A* 1lgr_A* 2lgs_A* 2gls_A
Probab=100.00  E-value=0  Score=888.96  Aligned_cols=432  Identities=28%  Similarity=0.422  Sum_probs=384.6

Q ss_pred             CHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEHHHHHHC-CCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf             98999999971798399999978898331267619887301-56773610000024277434665557788877899960
Q gi|254780503|r   16 NWEQAAKWLKDNRIEDVECITPDLAGIPRGKMMPSSKFISN-IPLTVPSAIYRHTISGESLHSPYLFHNERDGDLRLSPD   94 (461)
Q Consensus        16 ~~~~v~~~l~~~~I~~V~v~~~Dl~G~~RgK~vp~~~f~~~-~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~l~PD   94 (461)
                      +.++|+++|++++|+||+++|+|++|++|||.||+++|.+. ...|+       .++|+++.+   +...+++|++++||
T Consensus         1 s~e~v~~~l~~~~i~~V~~~~~Dl~G~~R~k~ip~~~~~~~~~~~G~-------~fdgssi~g---~~~~~~sD~~l~PD   70 (468)
T 1f52_A            1 SAEHVLTMLNEHEVKFVDLRFTDTKGKEQHVTIPAHQVNAEFFEEGK-------MFDGSSIGG---WKGINESDMVLMPD   70 (468)
T ss_dssp             CHHHHHHHHHHTTCCEEEEEEECTTSCEEEEEEEGGGCCHHHHHHCE-------EEEGGGSTT---SCCSSCCEEEEEEC
T ss_pred             CHHHHHHHHHHCCCEEEEEEEECCCCCEEEEEEEHHHHHHHHHHCCC-------CCCCCCCCC---CCCCCCCCEEEEEC
T ss_conf             97999999998898399999999999878999829997699985898-------656225257---67799889899982


Q ss_pred             CCCCEECCCCCCCEEEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCCCCC--EEECCCCCEEEEECCCCCCC-------
Q ss_conf             01245387888770999974033575-212342577789999986102764--02322441799821678888-------
Q gi|254780503|r   95 LSTLSIVPWEMDPTAQIVCDVVDYNG-KEVTYTPRNVLKRVLNFYAQNELK--PIIAPEIEFYLIAKNEDPDY-------  164 (461)
Q Consensus        95 ~~Tl~~lPw~~~~~a~vl~~~~~~dG-~p~~~~PR~iLkr~i~~l~~~G~~--~~~g~E~EF~L~~~~~~~~~-------  164 (461)
                      ++|++++||..+.++.|+|++++.++ .|+..|||++|++++++++++|+.  +.+|+|+|||+|+.......       
T Consensus        71 ~sT~~~~Pw~~~~~~~v~cd~~~~~~~~p~~~~PR~~l~~~~~~~~~~G~~~~~~~~~E~ef~l~~~~~~~~~~~~~~~~  150 (468)
T 1f52_A           71 ASTAVIDPFFADSTLIIRCDILEPGTLQGYDRDPRSIAKRAEDYLRATGIADTVLFGPEPEFFLFDDIRFGASISGSHVA  150 (468)
T ss_dssp             GGGCEECSSCSSCEEEEEEEEECTTTCCCCTTCHHHHHHHHHHHHHHHTSCSEEEEEEEEEEEEESEEEEEEETTEEEEE
T ss_pred             CCCEEECCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC
T ss_conf             78408898689862899999863676788778855899999999987599642341455699963143346787887454


Q ss_pred             ------C----CCCCCC-CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCC-CCCCCEEECCCCCHH
Q ss_conf             ------7----778778-8887766787777665442899999899767863110221010127-864201112665211
Q gi|254780503|r  165 ------P----LQPPKG-RSGRSILGGQSYSIMGINEFDEIIDDIWKFSEKQGLEIDTLIHEEG-PAQFEINIRHGDPLK  232 (461)
Q Consensus       165 ------~----~~~~~~-~~~~~~~~~~~y~~~~~~~~~~~l~~i~~~l~~~Gi~ve~~~~E~g-pGQ~Ei~~~~~~~l~  232 (461)
                            +    .....+ ...++...+++|++...+...++++++++.|+++||+||++|+|+| +||+||++.|+++|+
T Consensus       151 ~~~~e~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~gi~ve~~~~E~~~~GQ~Ei~~~~~d~L~  230 (468)
T 1f52_A          151 IDDIEGAWNSSTKYEGGNKGHRPGVKGGYFPVPPVDSAQDIRSEMCLVMEQMGLVVEAHHHEVATAGQNEVATRFNTMTK  230 (468)
T ss_dssp             EECTTCGGGGGCCCTTCCCCCCCCTTCCSSBCTTSSCCHHHHHHHHHHHHHTTCCEEEEEECSSTTTEEEEEECCEEHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEECCCCCHHH
T ss_conf             57622245778766678867510478871232664206779999999999739872110126567861887056775555


Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCC-CCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             378999999999999863066033112321135662689998763136874233588-6552156665457776422321
Q gi|254780503|r  233 LADQVFLFKRTIREAAFKHDIYATFMAKPMQNYPGSAMHIHQSVLDIKSNQNIFSNP-DGSETDNFRYFIGGLQKYIPNA  311 (461)
Q Consensus       233 aaD~~~~~k~~ik~vA~~~G~~atFmpKP~~~~~GsG~H~h~SL~d~~~g~n~f~~~-~~~ls~~~~~fiaGil~h~~al  311 (461)
                      +||+++++|++||+||++||++|||||||+.+.+|||||+|+|||+  +|+|+|+++ .+++|+++++||||||+|+|++
T Consensus       231 aAD~~~~~K~~vk~iA~~~Gl~ATFmpKP~~~~~GsG~H~H~Sl~~--~g~n~f~~~~~~~lS~~~~~~iaGlL~h~~~l  308 (468)
T 1f52_A          231 KADEIQIYKYVVHNVAHRFGKTATFMPKPMFGDNGSGMHCHMSLAK--NGTNLFSGDKYAGLSEQALYYIGGVIKHAKAI  308 (468)
T ss_dssp             HHHHHHHHHHHHHHHHHHTTCEEECCSCSSTTSCCCCEEEEEEEEE--TTEETTBCSSGGGBCHHHHHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEECC--CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf             4679999999999999961964688401268888874379998358--99606689887772899999999999863766


Q ss_pred             HHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEECC-CCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             222076610134420465575433424334500365022-3886520353035877998999999999999989846888
Q gi|254780503|r  312 LVMLAPYGNSYRRLVLDMGCPVNNAWGYDNRTTAFRIPF-SDAKTKRIENRLPSSDTNPYLVLAASLACGLLGILQKIEP  390 (461)
Q Consensus       312 ~a~~~PtvNSYkRl~p~~~ap~~~~WG~~NR~~~iRip~-~~~~~~riE~R~~d~~aNPYL~laail~agl~Gi~~~l~p  390 (461)
                      ++|+|||+||||||+|++|||+++|||++||+++||||. ++++++|||+|+||++|||||++||+|+|||+||+++++|
T Consensus       309 ~a~~~PtvNSYkRl~p~~~AP~~~~WG~~NR~~~iRip~~~~~~~~riE~R~~da~aNPYL~lAa~laagl~Gi~~~l~p  388 (468)
T 1f52_A          309 NALANPTTNSYKRLVPGYEAPVMLAYSARNRSASIRIPVVASPKARRIEVRFPDPAANPYLCFAALLMAGLDGIKNKIHP  388 (468)
T ss_dssp             HHHHSCSGGGGGTSSSCSSCCCEEEEESSCTTEEEECCCCSCGGGCCEEECCCCTTSCHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             HHHHCCCCHHHCCCCCCCCCCCCCEECCCCCCEEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf             60555881564167898758863352222584207815578987615784379987698999999999999999837999


Q ss_pred             CCCCCCCCCC-------CHHCCCCCHHHHHHHHHCCHHHHH---HCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf             7433453000-------311047898999999865989887---35589999999999999999863899789987631
Q gi|254780503|r  391 TPPTMKSANQ-------EAINLPRGLLEAVTLLENTSHFKD---IFGSQFIDMYANLKRNEFETFMQVISPWEREFLLL  459 (461)
Q Consensus       391 ~~~~~~~~~~-------~~~~LP~sL~eAl~~l~~d~~l~~---~lg~~~v~~~~~~k~~E~~~~~~~vt~wE~~~yl~  459 (461)
                      ++|+.+|+|+       +.++||+||.|||++|++|+.+++   +||++||++|+++||+||++|++.||+||+++||.
T Consensus       389 ~~p~~~~~~~~~~~~~~~~~~LP~sl~eAl~~l~~d~~~~~a~~~fg~~~v~~~~~~K~~E~~~~~~~vt~wE~~~Y~~  467 (468)
T 1f52_A          389 GEPMDKNLYDLPPEEAKEIPQVAGSLEEALNALDLDREFLKAGGVFTDEAIDAYIALRREEDDRVRMTPHPVEFELYYS  467 (468)
T ss_dssp             CSCCCSCCSSSCCSSTTCCCBCCSSHHHHHHHHHHTCHHHHGGGSSCHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHTT
T ss_pred             CCCCCCCHHHCCHHHHHCHHCCCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
T ss_conf             9867788144998676131016137999999997396988865515699999999999999999977999999974068