HHsearch results for GI: 254780503 and protein with PDBid: 2j9i_A

>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}
Probab=100.00  E-value=0  Score=840.07  Aligned_cols=410  Identities=21%  Similarity=0.224  Sum_probs=362.2

Q ss_pred             CHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEHHHHHHCC-CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf             989999999717983999999788983312676198873015-6773610000024277434665557788877899960
Q gi|254780503|r   16 NWEQAAKWLKDNRIEDVECITPDLAGIPRGKMMPSSKFISNI-PLTVPSAIYRHTISGESLHSPYLFHNERDGDLRLSPD   94 (461)
Q Consensus        16 ~~~~v~~~l~~~~I~~V~v~~~Dl~G~~RgK~vp~~~f~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~l~PD   94 (461)
                      +.++|+++|++++|+||+++|+|++|++|||.||+++|.+.. +.+       ..++|+++.+   +...+++|++++||
T Consensus         1 s~e~v~~~l~~~~I~~vr~~~~Dl~G~~Rgk~vp~~~~~~~~~~~g-------~~~dgs~~~g---~~~~~~sD~~l~PD   70 (421)
T 2j9i_A            1 SAEHVLTMLNEHAAAFVRFEATDAAGASRSKSIPAQFFEKVIHARG-------YLEDGEVNAG---AAGAAASDIVLMPE   70 (421)
T ss_dssp             CHHHHHHHHHHTTCSEEEEEEECSSSCEEEEEEEGGGCCTTHHHHC-------EEECGGGSTT---TCCTTCCCEEEEEC
T ss_pred             CHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHCCC-------CCCCCCCCCC---CCCCCCCCEEEEEC
T ss_conf             9899999999789939999989899986689980999999975698-------7157764267---66688888899988


Q ss_pred             CCCCEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE--CCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf             01245387888770999974033575212342577789999986102764023--2244179982167888877787788
Q gi|254780503|r   95 LSTLSIVPWEMDPTAQIVCDVVDYNGKEVTYTPRNVLKRVLNFYAQNELKPII--APEIEFYLIAKNEDPDYPLQPPKGR  172 (461)
Q Consensus        95 ~~Tl~~lPw~~~~~a~vl~~~~~~dG~p~~~~PR~iLkr~i~~l~~~G~~~~~--g~E~EF~L~~~~~~~~~~~~~~~~~  172 (461)
                      ++|+.++||....+++|+|+    ||+|++.|||++||+++++++++|+.+.+  |+|+|||+|+.....          
T Consensus        71 ~~T~~~~~~~~~~~~~v~~~----dG~p~~~~PR~iLkr~~~~l~~~G~~~~~~~~~E~Ef~l~~~~~~~----------  136 (421)
T 2j9i_A           71 LSTAAVAAAAAAATAAVICD----GGAAAAASPRYIARAALAQLQAAGAAAGLLSAFIADFCIFGVPEVI----------  136 (421)
T ss_dssp             SSCCEECTTSSSSEEEEEEE----EESSCSCCHHHHHHHHHHHHHHTTSCSEECCEECCCCEEESCCEEE----------
T ss_pred             CCCCCCCCCCCCCCEEEEEC----CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCC----------
T ss_conf             89764333344432179968----9997686989999999998753298737875047898864888666----------


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEECC-CCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             8877667877776654428999998997678631102210101278642011126-652113789999999999998630
Q gi|254780503|r  173 SGRSILGGQSYSIMGINEFDEIIDDIWKFSEKQGLEIDTLIHEEGPAQFEINIRH-GDPLKLADQVFLFKRTIREAAFKH  251 (461)
Q Consensus       173 ~~~~~~~~~~y~~~~~~~~~~~l~~i~~~l~~~Gi~ve~~~~E~gpGQ~Ei~~~~-~~~l~aaD~~~~~k~~ik~vA~~~  251 (461)
                          ...+.+|+....+....+ .+++..+..+||+++++|+|+||||||+++.+ +++|+|||++++||++||+||++|
T Consensus       137 ----~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gi~v~~~~~E~~pGQ~Ei~~~~~~~~l~aAD~~~~~K~~ik~iA~~h  211 (421)
T 2j9i_A          137 ----NSKTISFPASTTAAAADQ-PQEAAAGGAAGAAAGAAGGAAAAGAAEICFLPEAAGAAAADNAFTLRTGLQEVARRY  211 (421)
T ss_dssp             ----ECSSCEEEECCCTTCTTG-GGSCCTTCCCSCCCBTTBCCCCCSSCCTTTTTTTCCSCTTTHHHHHHHHHHHHHHTT
T ss_pred             ----CCCCCCCCCCCCCCHHHH-HHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf             ----677877777753100128-999998863578861135656554302205752213340108999999999999985


Q ss_pred             CCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
Q ss_conf             660331123211356626899987631368742335886-5521566654577764223212220766101344204655
Q gi|254780503|r  252 DIYATFMAKPMQNYPGSAMHIHQSVLDIKSNQNIFSNPD-GSETDNFRYFIGGLQKYIPNALVMLAPYGNSYRRLVLDMG  330 (461)
Q Consensus       252 G~~atFmpKP~~~~~GsG~H~h~SL~d~~~g~n~f~~~~-~~ls~~~~~fiaGil~h~~al~a~~~PtvNSYkRl~p~~~  330 (461)
                      |+.|||||||+.+.+|||||+|+|||  ++|+|+|++++ +++|+++++||||||+|+++++++++||+|||||+.|++|
T Consensus       212 G~~atFmpkP~~~~~Gsg~H~h~Sl~--~~g~n~f~~~~~~~ls~~~~~~iaGll~~~~~~~~~~~p~~nsy~r~~~~~~  289 (421)
T 2j9i_A          212 NAIASAAAAAAAAAAGAGSHSIWDVG--AAGTNAFAGASGARATLTGAKWLAGLLAAAAAAAAAAAAAAAAAAAAAAGAA  289 (421)
T ss_dssp             TCEEECCTTSSTTSCCCBCCEEECEE--ETTEESSCSSSGGGCCHHHHHHHHHHHHHHHHHHHHHTCSHHHHHHTSSSTT
T ss_pred             CCCCCCCCCCCCCCCCCCEEEEEECC--CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             99643332111112423406998448--9997265799976533999986388762123221111111111111111111


Q ss_pred             CCCCCCCCCCCCCEEEEEC-CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-HHCCCCC
Q ss_conf             7543342433450036502-2388652035303587799899999999999998984688874334530003-1104789
Q gi|254780503|r  331 CPVNNAWGYDNRTTAFRIP-FSDAKTKRIENRLPSSDTNPYLVLAASLACGLLGILQKIEPTPPTMKSANQE-AINLPRG  408 (461)
Q Consensus       331 ap~~~~WG~~NR~~~iRip-~~~~~~~riE~R~~d~~aNPYL~laail~agl~Gi~~~l~p~~~~~~~~~~~-~~~LP~s  408 (461)
                      ||+++|||.+||+++|||| .++.+++|||+|++|++|||||++||+|+|||+||+++++|++|+.++.+.. .++||+|
T Consensus       290 ap~~~~WG~~nR~~~iRv~~~~~~~~~riE~R~~d~~aNPYL~lAa~l~Agl~Gi~~~~~~~~~~~~~~~~~~~~~LP~t  369 (421)
T 2j9i_A          290 AAAATAWGAAAAACALNIAAAAAAKGAQIENKAGAAAANPYLVLAATVAAGLDGIQSAGAAAGAAAADAAAAAPSEIPGK  369 (421)
T ss_dssp             CCCEEEEESSCTTEEEEEECCSSGGGCEEEECSCBTTSCHHHHHHHHHHHHHHHHHHTCCCCSCBCSSSSCSSCCCCCSS
T ss_pred             CCCCEEECCCCCEEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCC
T ss_conf             10130424766617999840357877568834899887989999999999999987089998976777455673231889


Q ss_pred             HHHHHHHHHCC-HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf             89999998659-8988735589999999999999999863899789987631
Q gi|254780503|r  409 LLEAVTLLENT-SHFKDIFGSQFIDMYANLKRNEFETFMQVISPWEREFLLL  459 (461)
Q Consensus       409 L~eAl~~l~~d-~~l~~~lg~~~v~~~~~~k~~E~~~~~~~vt~wE~~~yl~  459 (461)
                      |+|||++|++| ++++++||++|++.|+++||+||++|   ||+||+++|++
T Consensus       370 L~eAl~~l~~d~~~l~~~lg~~~~~~~~~~K~~E~~~~---~t~~e~~ey~~  418 (421)
T 2j9i_A          370 MEDALAALEQDAECLKAGLGEAFIRAAVAAAKYELENE---ETDAEGNKFLE  418 (421)
T ss_dssp             HHHHHHHHTTCCSSSSCSCCCHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred             HHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHH---CCCHHHHHHHH
T ss_conf             99999999858599998768999999999999999996---58257999988