HHsearch results for GI: 254780503 and protein with PDBid: 2j9i_A
>2j9i_A Glutamate-ammonia ligase domain-containing protein 1; 17.00A {Mus musculus}
Probab=100.00 E-value=0 Score=840.07 Aligned_cols=410 Identities=21% Similarity=0.224 Sum_probs=362.2
Q ss_pred CHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEHHHHHHCC-CCCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEEEE
Q ss_conf 989999999717983999999788983312676198873015-6773610000024277434665557788877899960
Q gi|254780503|r 16 NWEQAAKWLKDNRIEDVECITPDLAGIPRGKMMPSSKFISNI-PLTVPSAIYRHTISGESLHSPYLFHNERDGDLRLSPD 94 (461)
Q Consensus 16 ~~~~v~~~l~~~~I~~V~v~~~Dl~G~~RgK~vp~~~f~~~~-~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~l~PD 94 (461)
+.++|+++|++++|+||+++|+|++|++|||.||+++|.+.. +.+ ..++|+++.+ +...+++|++++||
T Consensus 1 s~e~v~~~l~~~~I~~vr~~~~Dl~G~~Rgk~vp~~~~~~~~~~~g-------~~~dgs~~~g---~~~~~~sD~~l~PD 70 (421)
T 2j9i_A 1 SAEHVLTMLNEHAAAFVRFEATDAAGASRSKSIPAQFFEKVIHARG-------YLEDGEVNAG---AAGAAASDIVLMPE 70 (421)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEECSSSCEEEEEEEGGGCCTTHHHHC-------EEECGGGSTT---TCCTTCCCEEEEEC
T ss_pred CHHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHCCC-------CCCCCCCCCC---CCCCCCCCEEEEEC
T ss_conf 9899999999789939999989899986689980999999975698-------7157764267---66688888899988
Q ss_pred CCCCEECCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEE--CCCCCEEEEECCCCCCCCCCCCCCC
Q ss_conf 01245387888770999974033575212342577789999986102764023--2244179982167888877787788
Q gi|254780503|r 95 LSTLSIVPWEMDPTAQIVCDVVDYNGKEVTYTPRNVLKRVLNFYAQNELKPII--APEIEFYLIAKNEDPDYPLQPPKGR 172 (461)
Q Consensus 95 ~~Tl~~lPw~~~~~a~vl~~~~~~dG~p~~~~PR~iLkr~i~~l~~~G~~~~~--g~E~EF~L~~~~~~~~~~~~~~~~~ 172 (461)
++|+.++||....+++|+|+ ||+|++.|||++||+++++++++|+.+.+ |+|+|||+|+.....
T Consensus 71 ~~T~~~~~~~~~~~~~v~~~----dG~p~~~~PR~iLkr~~~~l~~~G~~~~~~~~~E~Ef~l~~~~~~~---------- 136 (421)
T 2j9i_A 71 LSTAAVAAAAAAATAAVICD----GGAAAAASPRYIARAALAQLQAAGAAAGLLSAFIADFCIFGVPEVI---------- 136 (421)
T ss_dssp SSCCEECTTSSSSEEEEEEE----EESSCSCCHHHHHHHHHHHHHHTTSCSEECCEECCCCEEESCCEEE----------
T ss_pred CCCCCCCCCCCCCCEEEEEC----CCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECCCCCCC----------
T ss_conf 89764333344432179968----9997686989999999998753298737875047898864888666----------
Q ss_pred CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCEEECC-CCCHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8877667877776654428999998997678631102210101278642011126-652113789999999999998630
Q gi|254780503|r 173 SGRSILGGQSYSIMGINEFDEIIDDIWKFSEKQGLEIDTLIHEEGPAQFEINIRH-GDPLKLADQVFLFKRTIREAAFKH 251 (461)
Q Consensus 173 ~~~~~~~~~~y~~~~~~~~~~~l~~i~~~l~~~Gi~ve~~~~E~gpGQ~Ei~~~~-~~~l~aaD~~~~~k~~ik~vA~~~ 251 (461)
...+.+|+....+....+ .+++..+..+||+++++|+|+||||||+++.+ +++|+|||++++||++||+||++|
T Consensus 137 ----~~~~~~~~~~~~~~~~~~-~~~~~~l~~~gi~v~~~~~E~~pGQ~Ei~~~~~~~~l~aAD~~~~~K~~ik~iA~~h 211 (421)
T 2j9i_A 137 ----NSKTISFPASTTAAAADQ-PQEAAAGGAAGAAAGAAGGAAAAGAAEICFLPEAAGAAAADNAFTLRTGLQEVARRY 211 (421)
T ss_dssp ----ECSSCEEEECCCTTCTTG-GGSCCTTCCCSCCCBTTBCCCCCSSCCTTTTTTTCCSCTTTHHHHHHHHHHHHHHTT
T ss_pred ----CCCCCCCCCCCCCCHHHH-HHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf ----677877777753100128-999998863578861135656554302205752213340108999999999999985
Q ss_pred CCCEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCC-CCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
Q ss_conf 660331123211356626899987631368742335886-5521566654577764223212220766101344204655
Q gi|254780503|r 252 DIYATFMAKPMQNYPGSAMHIHQSVLDIKSNQNIFSNPD-GSETDNFRYFIGGLQKYIPNALVMLAPYGNSYRRLVLDMG 330 (461)
Q Consensus 252 G~~atFmpKP~~~~~GsG~H~h~SL~d~~~g~n~f~~~~-~~ls~~~~~fiaGil~h~~al~a~~~PtvNSYkRl~p~~~ 330 (461)
|+.|||||||+.+.+|||||+|+||| ++|+|+|++++ +++|+++++||||||+|+++++++++||+|||||+.|++|
T Consensus 212 G~~atFmpkP~~~~~Gsg~H~h~Sl~--~~g~n~f~~~~~~~ls~~~~~~iaGll~~~~~~~~~~~p~~nsy~r~~~~~~ 289 (421)
T 2j9i_A 212 NAIASAAAAAAAAAAGAGSHSIWDVG--AAGTNAFAGASGARATLTGAKWLAGLLAAAAAAAAAAAAAAAAAAAAAAGAA 289 (421)
T ss_dssp TCEEECCTTSSTTSCCCBCCEEECEE--ETTEESSCSSSGGGCCHHHHHHHHHHHHHHHHHHHHHTCSHHHHHHTSSSTT
T ss_pred CCCCCCCCCCCCCCCCCCEEEEEECC--CCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99643332111112423406998448--9997265799976533999986388762123221111111111111111111
Q ss_pred CCCCCCCCCCCCCEEEEEC-CCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC-HHCCCCC
Q ss_conf 7543342433450036502-2388652035303587799899999999999998984688874334530003-1104789
Q gi|254780503|r 331 CPVNNAWGYDNRTTAFRIP-FSDAKTKRIENRLPSSDTNPYLVLAASLACGLLGILQKIEPTPPTMKSANQE-AINLPRG 408 (461)
Q Consensus 331 ap~~~~WG~~NR~~~iRip-~~~~~~~riE~R~~d~~aNPYL~laail~agl~Gi~~~l~p~~~~~~~~~~~-~~~LP~s 408 (461)
||+++|||.+||+++|||| .++.+++|||+|++|++|||||++||+|+|||+||+++++|++|+.++.+.. .++||+|
T Consensus 290 ap~~~~WG~~nR~~~iRv~~~~~~~~~riE~R~~d~~aNPYL~lAa~l~Agl~Gi~~~~~~~~~~~~~~~~~~~~~LP~t 369 (421)
T 2j9i_A 290 AAAATAWGAAAAACALNIAAAAAAKGAQIENKAGAAAANPYLVLAATVAAGLDGIQSAGAAAGAAAADAAAAAPSEIPGK 369 (421)
T ss_dssp CCCEEEEESSCTTEEEEEECCSSGGGCEEEECSCBTTSCHHHHHHHHHHHHHHHHHHTCCCCSCBCSSSSCSSCCCCCSS
T ss_pred CCCCEEECCCCCEEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCCC
T ss_conf 10130424766617999840357877568834899887989999999999999987089998976777455673231889
Q ss_pred HHHHHHHHHCC-HHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 89999998659-8988735589999999999999999863899789987631
Q gi|254780503|r 409 LLEAVTLLENT-SHFKDIFGSQFIDMYANLKRNEFETFMQVISPWEREFLLL 459 (461)
Q Consensus 409 L~eAl~~l~~d-~~l~~~lg~~~v~~~~~~k~~E~~~~~~~vt~wE~~~yl~ 459 (461)
|+|||++|++| ++++++||++|++.|+++||+||++| ||+||+++|++
T Consensus 370 L~eAl~~l~~d~~~l~~~lg~~~~~~~~~~K~~E~~~~---~t~~e~~ey~~ 418 (421)
T 2j9i_A 370 MEDALAALEQDAECLKAGLGEAFIRAAVAAAKYELENE---ETDAEGNKFLE 418 (421)
T ss_dssp HHHHHHHHTTCCSSSSCSCCCHHHHHHHHHHHHHHHHH---HHHHHHHHHHH
T ss_pred HHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHH---CCCHHHHHHHH
T ss_conf 99999999858599998768999999999999999996---58257999988