HHSEARCH alignment of GI: 254780503 and SCOP domain: d1r8ga_

Alignment
>d1r8ga_ d.128.1.3 (A:) Carboxylate-amine ligase YbdK {Escherichia coli [TaxId: 562]}
Probab=98.16  E-value=3e-06  Score=57.94  Aligned_cols=89  Identities=13%  Similarity=0.084  Sum_probs=61.4

Q ss_pred             CCCEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCC
Q ss_conf             76402322441799821678888777877888877667877776654428999998997678631102210101278642
Q gi|254780503|r  142 ELKPIIAPEIEFYLIAKNEDPDYPLQPPKGRSGRSILGGQSYSIMGINEFDEIIDDIWKFSEKQGLEIDTLIHEEGPAQF  221 (461)
Q Consensus       142 G~~~~~g~E~EF~L~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~i~~~l~~~Gi~ve~~~~E~gpGQ~  221 (461)
                      |-.+.+|+|.||++++.+.....                        .....+++.+.+.     ..-..+.+|..-+|+
T Consensus         7 ~~~~tiGvE~E~~lvd~~~~~~~------------------------~~~~~ll~~~~~~-----~~~~~i~~El~~~qi   57 (368)
T d1r8ga_           7 SEPFTLGIELEMQVVNPPGYDLS------------------------QDSSMLIDAVKNK-----ITAGEVKHDITESML   57 (368)
T ss_dssp             CCTTCEEEEEEEEEEETTTTEEC------------------------SCCHHHHTTTSSS-----CSSSEEEECSSSSEE
T ss_pred             CCCCCEEEEEEEEEECCCCCCCC------------------------CCHHHHHHHHHCC-----CCCCCCCCCCCCCEE
T ss_conf             99983489876543679987667------------------------7579999972222-----468863104677669


Q ss_pred             CEEECCC-CCHHHHHHHHHHHHHHHHHHHHHCCCEEECC
Q ss_conf             0111266-5211378999999999999863066033112
Q gi|254780503|r  222 EINIRHG-DPLKLADQVFLFKRTIREAAFKHDIYATFMA  259 (461)
Q Consensus       222 Ei~~~~~-~~l~aaD~~~~~k~~ik~vA~~~G~~atFmp  259 (461)
                      |++..|. +.-++.+.+...+..+++++.++|+..-.|+
T Consensus        58 El~t~p~~~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~g   96 (368)
T d1r8ga_          58 ELATDVCRDINQAAGQFSAMQKVVLQAATDHHLEICGGG   96 (368)
T ss_dssp             EEECCSBSSHHHHHHHHHHHHHHHHHHHHHTTCEEECCS
T ss_pred             EECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             980777799999999999999999998765587524457


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Glutamine synthetase/guanido kinase
superfamily: Glutamine synthetase/guanido kinase
family: Glutamate-cysteine ligase family 2 (GCS2)
domain: Carboxylate-amine ligase YbdK
species: Escherichia coli [TaxId: 562]