HHsearch alignment of GI: 254780504 and MMDB domain: 2yv1_A_1-128
>2yv1_A (A:1-128) Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii DSM2661}
Probab=94.31 E-value=0.43 Score=27.32 Aligned_cols=109 Identities=9% Similarity=-0.006 Sum_probs=69.9
Q ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf 89878998644356676577999999972898757817999988869988999999999987423467998999989851
Q gi|254780504|r 9 HNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSL 88 (492)
Q Consensus 9 ~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~ 88 (492)
.+..+.|.|++|- +.+...|+|.++ + ++.|+++..++...+.+
T Consensus 12 ~~irv~iiG~gg~-~g~~~~~~l~~~------~--~~~i~~v~~~~~~~~~~---------------------------- 54 (128)
T 2yv1_A 12 ENTKAIVQGITGR-QGSFHTKKMLEC------G--TKIVGGVTPGKGGQNVH---------------------------- 54 (128)
T ss_dssp TTCCEEEETTTSH-HHHHHHHHHHHT------T--CCEEEEECTTCTTCEET----------------------------
T ss_pred CCCEEEEECCCCC-HHHHHHHHHHHH------C--CCEEEEECCCCCCCEEE----------------------------
T ss_conf 9985999899884-768999999981------9--97788777998864773----------------------------
Q ss_pred CCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 65786467897789988887405767846998406956866677777772587644357760566789889999999998
Q gi|254780504|r 89 IFYINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITR 168 (492)
Q Consensus 89 ~~Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~ 168 (492)
++..-+++..+ ++..+ .-+.+.++||..-..++...-+.| ..+++|||.+.+++.+++|-+.-.
T Consensus 55 ------~~~~~~~~~~~---~~~~~--~d~V~i~~~~~~h~~~~~~~~~~G-----~~v~vekP~~~~~~e~~~l~~~a~ 118 (128)
T 2yv1_A 55 ------GVPVFDTVKEA---VKETD--ANASVIFVPAPFAKDAVFEAIDAG-----IELIVVITEHIPVHDTMEFVNYAE 118 (128)
T ss_dssp ------TEEEESSHHHH---HHHHC--CCEEEECCCHHHHHHHHHHHHHTT-----CSEEEECCSCCCHHHHHHHHHHHH
T ss_pred ------CCCCCCCHHHH---CCCCC--CCEEEEEECCCCCHHHHHHHHHCC-----CCEEEECCCCCCCHHHHHHHHHHH
T ss_conf ------81255745662---05556--636999603554605799998658-----877874167765114799999875
Q ss_pred HH
Q ss_conf 73
Q gi|254780504|r 169 KI 170 (492)
Q Consensus 169 ~~ 170 (492)
++
T Consensus 119 ~~ 120 (128)
T 2yv1_A 119 DV 120 (128)
T ss_dssp HH
T ss_pred CC
T ss_conf 57