HHsearch alignment of GI: 254780504 and MMDB domain: 2yv1_A_1-128

>2yv1_A (A:1-128) Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii DSM2661}
Probab=94.31  E-value=0.43  Score=27.32  Aligned_cols=109  Identities=9%  Similarity=-0.006  Sum_probs=69.9

Q ss_pred             CCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
Q ss_conf             89878998644356676577999999972898757817999988869988999999999987423467998999989851
Q gi|254780504|r    9 HNSDFIIFGGTGDLAKRKLFPALYNNYTNREENQISSRIIGICRIKMTVESYRSFVDKELQRYLKDGEYNPLKVQKFLSL   88 (492)
Q Consensus         9 ~~~~lVIFGATGDLA~RKL~PALf~L~~~~~l~~~~~~IiG~aR~~~~~e~fr~~v~~~l~~~~~~~~~~~~~~~~F~~~   88 (492)
                      .+..+.|.|++|- +.+...|+|.++      +  ++.|+++..++...+.+                            
T Consensus        12 ~~irv~iiG~gg~-~g~~~~~~l~~~------~--~~~i~~v~~~~~~~~~~----------------------------   54 (128)
T 2yv1_A           12 ENTKAIVQGITGR-QGSFHTKKMLEC------G--TKIVGGVTPGKGGQNVH----------------------------   54 (128)
T ss_dssp             TTCCEEEETTTSH-HHHHHHHHHHHT------T--CCEEEEECTTCTTCEET----------------------------
T ss_pred             CCCEEEEECCCCC-HHHHHHHHHHHH------C--CCEEEEECCCCCCCEEE----------------------------
T ss_conf             9985999899884-768999999981------9--97788777998864773----------------------------


Q ss_pred             CCEEECCCCCHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             65786467897789988887405767846998406956866677777772587644357760566789889999999998
Q gi|254780504|r   89 IFYINLDVEKNYGWELLGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITR  168 (492)
Q Consensus        89 ~~Y~~~d~~~~~~y~~L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~  168 (492)
                            ++..-+++..+   ++..+  .-+.+.++||..-..++...-+.|     ..+++|||.+.+++.+++|-+.-.
T Consensus        55 ------~~~~~~~~~~~---~~~~~--~d~V~i~~~~~~h~~~~~~~~~~G-----~~v~vekP~~~~~~e~~~l~~~a~  118 (128)
T 2yv1_A           55 ------GVPVFDTVKEA---VKETD--ANASVIFVPAPFAKDAVFEAIDAG-----IELIVVITEHIPVHDTMEFVNYAE  118 (128)
T ss_dssp             ------TEEEESSHHHH---HHHHC--CCEEEECCCHHHHHHHHHHHHHTT-----CSEEEECCSCCCHHHHHHHHHHHH
T ss_pred             ------CCCCCCCHHHH---CCCCC--CCEEEEEECCCCCHHHHHHHHHCC-----CCEEEECCCCCCCHHHHHHHHHHH
T ss_conf             ------81255745662---05556--636999603554605799998658-----877874167765114799999875


Q ss_pred             HH
Q ss_conf             73
Q gi|254780504|r  169 KI  170 (492)
Q Consensus       169 ~~  170 (492)
                      ++
T Consensus       119 ~~  120 (128)
T 2yv1_A          119 DV  120 (128)
T ss_dssp             HH
T ss_pred             CC
T ss_conf             57