HHsearch results for GI: 254780504 and protein with PDBid: 1h6d_A
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=95.69 E-value=0.13 Score=29.97 Aligned_cols=275 Identities=12% Similarity=0.096 Sum_probs=126.7
Q ss_pred HHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCHHHEEECCCHH-
Q ss_conf 8887405767846998406956866677777772587644357760566789889999999998738968835124201-
Q gi|254780504|r 105 LGKLLDIDKTRIRVFYLAMSSAFFGKISQRIHANNLVTEHTRVVLEKPIGSNLSSAQEIHAITRKIFKESQIFRIDHYL- 183 (492)
Q Consensus 105 L~~~l~~~~~~~rifYLAiPP~~f~~i~~~L~~~~l~~~~~RiViEKPFG~Dl~SA~eLn~~l~~~f~E~qiyRIDHYL- 183 (492)
+.++++..+ .=+.|.++||..=..++...-++| .-|.+|||++.|++.|++|.+...+. ...+.+-|-.
T Consensus 142 ~~~ll~~~~--iD~V~i~tp~~~H~~~~~~al~aG-----khv~~EKP~a~~~~e~~~l~~~a~~~---~~~~~v~~~~r 211 (433)
T 1h6d_A 142 FDKIAKDPK--IDAVYIILPNSLHAEFAIRAFKAG-----KHVMCEKPMATSVADCQRMIDAAKAA---NKKLMIGYRCH 211 (433)
T ss_dssp GGGGGGCTT--CCEEEECSCGGGHHHHHHHHHHTT-----CEEEECSSCCSSHHHHHHHHHHHHHH---TCCEEECCGGG
T ss_pred HHHHHCCCC--CCEEEEECCHHHHHHHHHHHHHCC-----CEEEEECCCCCCCCCCCHHHHHHHHH---CCCEEECCCCC
T ss_conf 999956999--878999098799999999999879-----91999578412333232024667652---40115312123
Q ss_pred HHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEEEEECCCCH---HHHHHHH---HHHHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 25687777887747752002528033307999998467702---4555532---20017887655899999998718544
Q gi|254780504|r 184 GKEAVQGLMVFRFANTFYESLWNNKYIDHVQITTAETIGVE---DRVDYYN---NTGALRDMIQNHLLQLLCLVAMEMPP 257 (492)
Q Consensus 184 GKe~vqnil~lRFaN~~~e~~WNr~~I~~VqIt~~E~~gve---gR~~yyD---~~GaiRDmvQNHllQlL~lvAMe~P~ 257 (492)
--+.++-+.-+=-.+.+= -|..|+........-. ....++. .-|++-|+.- |.+-++..+.=+.|.
T Consensus 212 ~~~~~~~~k~~i~~g~iG-------~i~~v~~~~~~~~~~~~~~~~~~~~~~~~gGG~l~d~g~-H~iD~l~~l~G~~p~ 283 (433)
T 1h6d_A 212 YDPMNRAAVKLIRENQLG-------KLGMVTTDNSDVMDQNDPAQQWRLRRELAGGGSLMDIGI-YGLNGTRYLLGEEPI 283 (433)
T ss_dssp GCHHHHHHHHHHHTTSSC-------SEEEEEEEEECCCCTTSHHHHGGGCHHHHSSSHHHHTHH-HHHHHHHHHHTSCEE
T ss_pred CCCCCCCCCCCCCCCCCC-------CEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCH-HHHHHHHHHHCCCCE
T ss_conf 476322332111357777-------325898630344335666532234643567760035523-099999998499956
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCHHHCCCCEEEECCCCCCCCCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEE
Q ss_conf 58858999999999973068881122361365213667768734334101479886648743899999708586785777
Q gi|254780504|r 258 SVEAKSIKNEKIKVLQALQMITPENVQKLTVRGQYQSGIINGIPVKGYLEEIPLGISDTETFVAIKANIDNPRWSGIPFY 337 (492)
Q Consensus 258 ~~~~~~ir~eK~kvlk~~r~~~~~~v~~~~v~GQY~~~~~~~~~v~gY~~e~~v~~S~TeTfaa~~l~idn~RW~gVPF~ 337 (492)
+ |.++-.. .-.......+++.+.+.+...| |+...
T Consensus 284 ~-----------------------------V~a~~~~------------~~~~~~~~~~eD~~~~~l~f~n----G~~~~ 318 (433)
T 1h6d_A 284 E-----------------------------VRAYTYS------------DPNDERFVEVEDRIIWQMRFRS----GALSH 318 (433)
T ss_dssp E-----------------------------EEEEEEC------------CTTCGGGSSSCSEEEEEEEETT----SCEEE
T ss_pred E-----------------------------EEEEEEE------------CCCCCCCCCCCCCCCCCEECCC----CCEEE
T ss_conf 9-----------------------------9999851------------4676556433543310000489----61899
Q ss_pred EEECCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCEE-EEEEECCCCCCCCEEEEEEEEEEECCCCCC
Q ss_conf 5513346885179999985488643766654789856999971796504-443312688877445466665530223456
Q gi|254780504|r 338 LRTGKYLAKHISEIVIALKPAPCTIFDHQMSKIETNKLILRLQNNGEIE-QFITTKDHSTSNMKLKTTALRICCCSKRIK 416 (492)
Q Consensus 338 lrtGK~l~~k~~eI~i~FK~~p~~~f~~~~~~~~~N~Lvi~iqP~~~i~-l~~~~K~pg~~~~~~~~~~l~~~~~~~~~~ 416 (492)
+.+.-.-. ...++.|..-+ ..++ +.+..... -......++. ... ........
T Consensus 319 ~~~s~~~~-~~~~~~I~Gtk---------------G~i~--~~~~~~~~~~~~~~~~~~~----~~~-----~~~~~~~~ 371 (433)
T 1h6d_A 319 GASSYSTT-TTSRFSVQGDK---------------AVLL--MDPATGYYQNLISVQTPGH----ANQ-----SMMPQFIM 371 (433)
T ss_dssp EEEESSSC-CEEEEEEEESS---------------CEEE--ESSSSCSSCCCEEEEETTE----EEE-----ECCCSSCC
T ss_pred EEECCCCC-CCCEEEEECCC---------------EEEE--EECCCCCCCCEEEEECCCC----CCC-----CCCCCCCC
T ss_conf 86201235-67615998152---------------6999--9578774232278833787----765-----44765556
Q ss_pred CCCCHHHHH---HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 898624899---99998798335869899998458846999988734898745798
Q gi|254780504|r 417 RTPDGYERL---LMDIIHANQTLFMGYDEVEETWKWSDSILKSWQIINQKVDYYAA 469 (492)
Q Consensus 417 ~~pdaYe~L---l~D~i~Gd~tlF~r~dEve~sWrivdpiL~~~~~~~~~~~~Y~~ 469 (492)
...++|... +.+++.++...-...++-..+=++++-+.+.++..+..-..|.+
T Consensus 372 ~~~~~~~~e~~~F~~aI~~~~~~~~s~eda~~~~~iieAi~~Sa~tGk~V~id~~~ 427 (433)
T 1h6d_A 372 PANNQFSAQLDHLAEAVINNKPVRSPGEEGMQDVRLIQAIYEAARTGRPVNTDWGY 427 (433)
T ss_dssp SSCCHHHHHHHHHHHHHHTTCCCSSBHHHHHHHHHHHHHHHHHHHHSSCEECCSCC
T ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 75439999999999999679989899999999999999999999739869989898