HHsearch alignment of GI: 254780505 and MMDB domain: 2r5f_A_

>2r5f_A (A:) Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural genomics, PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV}
Probab=99.96  E-value=5.6e-29  Score=197.19  Aligned_cols=199  Identities=12%  Similarity=0.096  Sum_probs=149.8

Q ss_pred             EECCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHH
Q ss_conf             948989999999999999999999728977999879-8646999987876307953238998132100356732027889
Q gi|254780505|r    8 VAENKKRLAQKLAKKVAEQLSIGITNKGTASIALSG-GLTPRFFLEELSIINVDWHKVVVTLVDERFVPLENLRSNQSFI   86 (234)
Q Consensus         8 i~~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsG-Gstp~~~y~~L~~~~~~w~kv~~~~~DER~V~~~~~~Sn~~~~   86 (234)
                      ++++.+++.+.+++.+++.+.+.++.  ...+++++ |+++..+++.+....++|++|+|+++||++  .++++||+..+
T Consensus        32 ~~~~~~~~~~~va~~aa~~l~~~l~~--~~~i~i~~ggt~~~~~~~~~~~~~~~~~~v~~v~~~g~~--~~~~~~~~~~~  107 (264)
T 2r5f_A           32 EPDDEESIKQAIGSAAAHYLETSLSA--QDHIGISSWSSTIRAXVSHXHPQPGKQSAQEVVQLLGGV--GNKGAFEATLL  107 (264)
T ss_dssp             STTCHHHHHHHHHHHHHHHHHHHCCT--TCEEEECTTCHHHHHHHHTCCC--CCCCCSEEEECEECC--C--CHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHCCC--CCEEEEECCCHHHHHHHHHCCCCCCCCCCCEEEEECCCC--CCCCCCCHHHH
T ss_conf             99975899999999999999986665--987999758579999998627566666882599605888--88887589999


Q ss_pred             HHHHHCCCCCCCCEEECCCCCCCHHHH-----HHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECCCCCCCEEEC-CCCC
Q ss_conf             997623567763214445887898999-----9999999963158776489944788771434027864100221-5667
Q gi|254780505|r   87 SKFFLQNKAQKASFIPLYYPQKTIEEA-----IRIANEKICQLIHFPFDVVVLGMGIDGHTASFFPKGDTLSIAL-DTHT  160 (234)
Q Consensus        87 ~~~ll~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP~~~~l~~~~-~~~~  160 (234)
                      .+.|.++...+..+++.+....++++.     ...+.+.+...  .++|+++||||+|||+||+||+++.+.... ....
T Consensus       108 ~~~la~~~~~~~~~l~~p~~~~~~~~~~~~~~~~~~~~~l~~~--~~~DiallGiG~~gh~asl~~~~~~~~~~~~~~l~  185 (264)
T 2r5f_A          108 TQRLATLLNCPAFLLPSQSIEQSVESKQRIVEXEEVKEVLHRF--DSITLAIVGIGELEPSQLLRNSGNYYTEDXLRVLA  185 (264)
T ss_dssp             HHHHHHHHTSCEECCCCC----------CCHHHHHHHHHHHHT--TTCCEEEECCEECC-------------------CT
T ss_pred             HHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCHHHHHHHHHH--HHCCEEEEECCCCCCCCHHHHHCCCCCHHHHHHHH
T ss_conf             9999987297179605620137999999998595899999999--74999999538887651255606889999999999


Q ss_pred             CC-CE-----EEEC------CCCCCCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCCC
Q ss_conf             43-18-----9953------89987215870878884158299998183489999999808983
Q gi|254780505|r  161 PR-SV-----IAIK------DYTSNEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDDA  212 (234)
Q Consensus       161 ~~-~~-----~~~~------~~~~p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~~  212 (234)
                      .. .+     ...+      ..+.|.+|||+|++.|+++++++++++|++|+++++.++.+...
T Consensus       186 ~~~avgd~~~~~~d~~G~~~~~~~~~~~itlt~~~l~~a~~vi~va~G~~K~~ai~~al~~~~~  249 (264)
T 2r5f_A          186 ERGAVGDICLRYFDAQGKPVLEEDEEFVVSXGLGKLRSINRVLGLAGGVRKVQAIKGALLGGYL  249 (264)
T ss_dssp             TTTCCEEETTEEECTTSCBC-------CEECCHHHHHTSSEEEEECCCGGGHHHHHHHHHTTCC
T ss_pred             HCCEEEEHHHHHHCCCCCCCCCCCCCCEECCCHHHHCCCCCEEEEECCCHHHHHHHHHHHCCCC
T ss_conf             8895786510220437899865441336316878946799689995680649999999936999