HHsearch results for GI: 254780505 and protein with PDBid: 2r5f_A

>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural genomics, PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=98.22  E-value=8.3e-05  Score=48.07  Aligned_cols=195  Identities=12%  Similarity=0.118  Sum_probs=100.9

Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE-CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf             9899999999999999999997289779998-798646999987876307953238998132100356732027889997
Q gi|254780505|r   11 NKKRLAQKLAKKVAEQLSIGITNKGTASIAL-SGGLTPRFFLEELSIINVDWHKVVVTLVDERFVPLENLRSNQSFISKF   89 (234)
Q Consensus        11 ~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~l-sGGstp~~~y~~L~~~~~~w~kv~~~~~DER~V~~~~~~Sn~~~~~~~   89 (234)
                      +.+...+.++...+..+.+.++..  -.|++ +.|+|...+-+.|......-..++|..+-= -+....+ -+...+-..
T Consensus        35 ~~~~~~~~lg~~aA~~L~~~l~~~--~~iGv~~WG~Tv~~~~~~l~~~~~~~~~~~vV~l~G-g~~~~~~-~~~~~i~~~  110 (264)
T 2r5f_A           35 DEESIKQAIGSAAAHYLETSLSAQ--DHIGISSWSSTIRAMVSHMHPQPGKQSAQEVVQLLG-GVGNKGA-FEATLLTQR  110 (264)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHCCTT--CEEEECTTCHHHHHHHHTCCC--CCCCCSEEEECEE-CCC--CH-HHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHHHCCCC--CEEEEECCCHHHHHHHHHCCCCCCCCCCCEEEECCC-CCCCCCC-CCHHHHHHH
T ss_conf             768999999999999999865569--879994465899999986277766668986996679-9988876-579999999


Q ss_pred             HHCCCCCCCCEEECCCCCCCHHH-----HHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECC-----CCCCCEEECCC-
Q ss_conf             62356776321444588789899-----99999999963158776489944788771434027-----86410022156-
Q gi|254780505|r   90 FLQNKAQKASFIPLYYPQKTIEE-----AIRIANEKICQLIHFPFDVVVLGMGIDGHTASFFP-----KGDTLSIALDT-  158 (234)
Q Consensus        90 ll~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP-----~~~~l~~~~~~-  158 (234)
                      |-+....+..++|.|.-..+.+.     .-..+.+-++...  ..|++++|+|.=..-++++-     ..+.++..... 
T Consensus       111 lA~~~~~~~~~l~aP~~~~s~~~~~~l~~~~~v~~~l~~~~--~~diav~gIG~~~~~s~~~~~g~~~~~~~~~~l~~~g  188 (264)
T 2r5f_A          111 LATLLNCPAFLLPSQSIEQSVESKQRIVEMEEVKEVLHRFD--SITLAIVGIGELEPSQLLRNSGNYYTEDMLRVLAERG  188 (264)
T ss_dssp             HHHHHTSCEECCCCC----------CCHHHHHHHHHHHHTT--TCCEEEECCEECC-------------------CTTTT
T ss_pred             HHHHHCCEEEECCCCHHCCCHHHHHHHHHCHHHHHHHHHHH--HCCEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHCC
T ss_conf             99970982782057010068999999985938999999997--5999999547887662145506879999999998789


Q ss_pred             -CCCCCEEEECCCCC----C-CEE-EEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCC
Q ss_conf             -67431899538998----7-215-87087888415829999818348999999980898
Q gi|254780505|r  159 -HTPRSVIAIKDYTS----N-EQR-MTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDD  211 (234)
Q Consensus       159 -~~~~~~~~~~~~~~----p-~~R-ITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~  211 (234)
                       ..+-...+.+....    + ..| |.+++..|.+.++++.++.|++|++++..++.|.-
T Consensus       189 AVGdi~g~f~D~~G~~v~~~~~~r~igi~l~~Lr~i~~~I~VA~G~~K~~AI~aALrgg~  248 (264)
T 2r5f_A          189 AVGDICLRYFDAQGKPVLEEDEEFVVSMGLGKLRSINRVLGLAGGVRKVQAIKGALLGGY  248 (264)
T ss_dssp             CCEEETTEEECTTSCBC-------CEECCHHHHHTSSEEEEECCCGGGHHHHHHHHHTTC
T ss_pred             EEEEEEEEEECCCCCCCCCCCCCCEECCCHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC
T ss_conf             399968126856898986544023514787895679968999667465999999983699