HHsearch results for GI: 254780505 and protein with PDBid: 2r5f_A
>2r5f_A Transcriptional regulator, putative; transcription regulator, sugar-binding domain, structural genomics, PFAM04198, PSI-2; 2.10A {Pseudomonas syringae PV} SCOP: c.124.1.8
Probab=98.22 E-value=8.3e-05 Score=48.07 Aligned_cols=195 Identities=12% Similarity=0.118 Sum_probs=100.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCEEEEE-CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHH
Q ss_conf 9899999999999999999997289779998-798646999987876307953238998132100356732027889997
Q gi|254780505|r 11 NKKRLAQKLAKKVAEQLSIGITNKGTASIAL-SGGLTPRFFLEELSIINVDWHKVVVTLVDERFVPLENLRSNQSFISKF 89 (234)
Q Consensus 11 ~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~l-sGGstp~~~y~~L~~~~~~w~kv~~~~~DER~V~~~~~~Sn~~~~~~~ 89 (234)
+.+...+.++...+..+.+.++.. -.|++ +.|+|...+-+.|......-..++|..+-= -+....+ -+...+-..
T Consensus 35 ~~~~~~~~lg~~aA~~L~~~l~~~--~~iGv~~WG~Tv~~~~~~l~~~~~~~~~~~vV~l~G-g~~~~~~-~~~~~i~~~ 110 (264)
T 2r5f_A 35 DEESIKQAIGSAAAHYLETSLSAQ--DHIGISSWSSTIRAMVSHMHPQPGKQSAQEVVQLLG-GVGNKGA-FEATLLTQR 110 (264)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCCTT--CEEEECTTCHHHHHHHHTCCC--CCCCCSEEEECEE-CCC--CH-HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCC--CEEEEECCCHHHHHHHHHCCCCCCCCCCCEEEECCC-CCCCCCC-CCHHHHHHH
T ss_conf 768999999999999999865569--879994465899999986277766668986996679-9988876-579999999
Q ss_pred HHCCCCCCCCEEECCCCCCCHHH-----HHHHHHHHHHHHCCCCCCEEEECCCCCCCEEEECC-----CCCCCEEECCC-
Q ss_conf 62356776321444588789899-----99999999963158776489944788771434027-----86410022156-
Q gi|254780505|r 90 FLQNKAQKASFIPLYYPQKTIEE-----AIRIANEKICQLIHFPFDVVVLGMGIDGHTASFFP-----KGDTLSIALDT- 158 (234)
Q Consensus 90 ll~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~Dl~lLGiG~DGH~ASlFP-----~~~~l~~~~~~- 158 (234)
|-+....+..++|.|.-..+.+. .-..+.+-++... ..|++++|+|.=..-++++- ..+.++.....
T Consensus 111 lA~~~~~~~~~l~aP~~~~s~~~~~~l~~~~~v~~~l~~~~--~~diav~gIG~~~~~s~~~~~g~~~~~~~~~~l~~~g 188 (264)
T 2r5f_A 111 LATLLNCPAFLLPSQSIEQSVESKQRIVEMEEVKEVLHRFD--SITLAIVGIGELEPSQLLRNSGNYYTEDMLRVLAERG 188 (264)
T ss_dssp HHHHHTSCEECCCCC----------CCHHHHHHHHHHHHTT--TCCEEEECCEECC-------------------CTTTT
T ss_pred HHHHHCCEEEECCCCHHCCCHHHHHHHHHCHHHHHHHHHHH--HCCEEEEECCCCCCCCHHHHCCCCCCHHHHHHHHHCC
T ss_conf 99970982782057010068999999985938999999997--5999999547887662145506879999999998789
Q ss_pred -CCCCCEEEECCCCC----C-CEE-EEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCC
Q ss_conf -67431899538998----7-215-87087888415829999818348999999980898
Q gi|254780505|r 159 -HTPRSVIAIKDYTS----N-EQR-MTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDD 211 (234)
Q Consensus 159 -~~~~~~~~~~~~~~----p-~~R-ITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~ 211 (234)
..+-...+.+.... + ..| |.+++..|.+.++++.++.|++|++++..++.|.-
T Consensus 189 AVGdi~g~f~D~~G~~v~~~~~~r~igi~l~~Lr~i~~~I~VA~G~~K~~AI~aALrgg~ 248 (264)
T 2r5f_A 189 AVGDICLRYFDAQGKPVLEEDEEFVVSMGLGKLRSINRVLGLAGGVRKVQAIKGALLGGY 248 (264)
T ss_dssp CCEEETTEEECTTSCBC-------CEECCHHHHHTSSEEEEECCCGGGHHHHHHHHHTTC
T ss_pred EEEEEEEEEECCCCCCCCCCCCCCEECCCHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC
T ss_conf 399968126856898986544023514787895679968999667465999999983699