HHsearch results for GI: 254780505 and protein with PDBid: 3nze_A
>3nze_A Putative transcriptional regulator, sugar-binding; structural genomics, PSI-2, protein structure initiative; 1.70A {Arthrobacter aurescens TC1}
Probab=99.01 E-value=6.7e-09 Score=73.16 Aligned_cols=207 Identities=14% Similarity=0.108 Sum_probs=116.3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEEECCCCC-CCCCCCCCHHHHHHH
Q ss_conf 8989999999999999999999728977999879864699998787630795323899813210-035673202788999
Q gi|254780505|r 10 ENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIINVDWHKVVVTLVDERF-VPLENLRSNQSFISK 88 (234)
Q Consensus 10 ~~~~~l~~~~a~~i~~~i~~~i~~~~~~~i~lsGGstp~~~y~~L~~~~~~w~kv~~~~~DER~-V~~~~~~Sn~~~~~~ 88 (234)
.+.++..+.++...++.+...++ +...|++++|+|+..+++.|.... -..+.++.+.... .+.+.. .+...+-.
T Consensus 33 ~~~~~~~~~v~~~aA~~l~~~l~--~~~~iGv~wG~Tl~~~~~~l~~~~--~~~~~vv~l~g~~~~~~~~~-~~~~~i~~ 107 (267)
T 3nze_A 33 LNEAETLDRVAMQAARTIGPLVD--SNAIIGVAWGATLSAVSRHLTRKM--THDSIVVQLNGAGNMQTTGI-TYASDIMR 107 (267)
T ss_dssp CCHHHHHHHHHHHHHHHHGGGCC--SSCEEEECCSHHHHHHHHTCCCCC--CSSCEEEECSCCCCTTSCSH-HHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHCC--CCCEEEECCCHHHHHHHHHHCCCC--CCCCEEEECCCCCCCCCCCC-CCHHHHHH
T ss_conf 98489999999999999998688--999899858888999999733124--79988996678887777666-69999999
Q ss_pred HHHCCCCCCCCEEECCCCCCCHHHH-----HHHHHHHHHHHCCCCCCEEEECCCCCCCEE--EECCCC----CCCEEEC-
Q ss_conf 7623567763214445887898999-----999999996315877648994478877143--402786----4100221-
Q gi|254780505|r 89 FFLQNKAQKASFIPLYYPQKTIEEA-----IRIANEKICQLIHFPFDVVVLGMGIDGHTA--SFFPKG----DTLSIAL- 156 (234)
Q Consensus 89 ~ll~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~Dl~lLGiG~DGH~A--SlFP~~----~~l~~~~- 156 (234)
.|-.....+..++|.|.--.+.+.. ...+.+.++... ..|++++|+|.=++-. .+++.. ..+....
T Consensus 108 ~lA~~~~~~~~~l~aP~~v~s~~~~~~l~~~~~i~~~l~~~~--~~diai~GIG~~~~~~~~~~~~~~~~~~~~~~~l~~ 185 (267)
T 3nze_A 108 RFGSAYGARVEQFPVPAFFDHASTKTAMWNERSVQRILDLQA--RMSIAIFGVGSVDSDYPSHVYAGGYLDEHDLTMLAA 185 (267)
T ss_dssp HHHHHHTCEEECCCSCSSCSSHHHHHHHTTCHHHHHHHHHHH--TCSEEEECCEECC-----CCCTTSCCCHHHHHHHHH
T ss_pred HHHHHHCCCEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHH--CCCEEEEEECCCCCCCCCEEECCCCCCHHHHHHHHH
T ss_conf 999983995114577432698999999986869999999984--699899965788888851020379999999999987
Q ss_pred ---CCCCCCCEEEECCCCC----CCEEEEECHHHHHCCCEEEEEEECHHHHHHHHHHHCCCC-----CCCCCHHHHHHC
Q ss_conf ---5667431899538998----721587087888415829999818348999999980898-----320608999618
Q gi|254780505|r 157 ---DTHTPRSVIAIKDYTS----NEQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISGDD-----ALEMPIRAILWN 223 (234)
Q Consensus 157 ---~~~~~~~~~~~~~~~~----p~~RITlt~~~l~~a~~i~ll~~G~~K~~al~~~l~~~~-----~~~~Pas~ll~~ 223 (234)
.-+-.-.++-.+.... ..+.|++++..|++++++++++.|++|++++..++.+.- +.+--|..||..
T Consensus 186 ~gavGdi~g~ffd~~G~~v~~~~~~r~igi~l~~l~~i~~vI~vA~G~~K~~AI~aAL~gg~i~~LITDe~tA~~LL~~ 264 (267)
T 3nze_A 186 DDVVGDVATVFFRSDGSSDGITLNERSTGPSHEQLRQVRRRICVVSGASKINGLQGALAAGLATDLILDEASARRLVSF 264 (267)
T ss_dssp TTEEEEETTEEEETTSCCTTCGGGGGCCSCCHHHHHTSSEEEEEECCGGGHHHHHHHHHTTCCSEEEEEHHHHHHHTC-
T ss_pred CCCEEEHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEECHHHHHHHHHH
T ss_conf 8855888342514789886765665301368899826897899967816699999999469997899799999999810