RPSBLAST alignment of GI: 254780505 and SCOP domain: d3efba1

Alignment

 Score = 40.4 bits (94), Expect = 1e-04
 Identities = 27/216 (12%), Positives = 61/216 (28%), Gaps = 18/216 (8%)

Query: 9   AENKKRLAQKLAKKVAEQLSIGITNKGTASIALSGGLTPRFFLEELSIINVDWHKVVVTL 68
            E+++     +    A+ L   +       +  S G      +E L         + V +
Sbjct: 25  DEDEETQLAMMGLHGAQLLDRLLEPGDI--VGFSWGRAVSALVENLPQAGQSRQLICVPI 82

Query: 69  VDERFVPLENLRSNQSFISKFFLQNKAQ-KASFIPLYYPQKTIEEAIR--IANEKICQLI 125
           +      LE+     +       + K +   +  P       I   I      + I    
Sbjct: 83  IGGPSGKLESRYHVNTLTYSAAAKLKGESHLADFPALLDNPLIRNGIMQSQHFKTISAYW 142

Query: 126 HFPFDVVVLGMGIDGHTASFFPKGDTLSIALDTHTPRSVIA------------IKDYTSN 173
               D+ ++G+G                   D    R V              + +   +
Sbjct: 143 D-NLDIALVGIGSPAIRDGANWHAFYGGEESDDLNARQVAGDICSRFFDIHGAMVETNMS 201

Query: 174 EQRMTMTFSALHDAQFLALHIEGTQKKHVLEKAISG 209
           E+ +++  + L  A++        +K   +  A+ G
Sbjct: 202 EKTLSIEMNKLKQARYSIGIAMSEEKYSGIIGALRG 237

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: NagB/RpiA/CoA transferase-like
superfamily: NagB/RpiA/CoA transferase-like
family: SorC sugar-binding domain-like
domain: Sor-operon regulator SorC
species: Shigella flexneri [TaxId: 623]