HHsearch alignment for GI: 254780506 and conserved domain: COG0169
>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism].
Probab=97.14 E-value=0.032 Score=36.30 Aligned_cols=209 Identities=21% Similarity=0.322 Sum_probs=135.5
Q ss_pred HHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCH-------H-HHHHHHHCCCCCCH-
Q ss_conf 99999999998397000024741112266999999852312212588834688711-------3-78898606874351-
Q gi|254780506|r 49 YVSAKTRMAKHCGFHSVQYNFPVDISQIDLENAVLSLNKDDSIHGILVQLPLPSTV-------S-EQSIIQSIVPEKDV- 119 (306)
Q Consensus 49 Yv~~K~K~a~~lGI~~~~~~l~~~~se~el~~~I~~LN~d~~V~GIlvQlPLP~~i-------d-~~~i~~~I~p~KDV- 119 (306)
T Consensus 21 SP~~Hn~~~~~lGl~~~Y~a~--~v~~~~l~~~v~~~~-~~g~~G~NVTiP~Ke~~~~~lD~l~~~A~~iGAVNTl~~~~ 97 (283)
T COG0169 21 SPRMHNAAFRALGLDYVYLAF--EVPPEDLPEAVSGIR-ALGFRGLNVTIPFKEAALPLLDELSPRARLIGAVNTLVRED 97 (283)
T ss_pred CHHHHHHHHHHCCCCCEEEEE--ECCHHHHHHHHHHHH-HCCCCEEEECCCCHHHHHHHHHCCCHHHHHHCCCEEEEECC
T ss_conf 889999999981998567776--359899999999987-44887169877568889998744899899718714899766
Q ss_pred HHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCC-CCCCCCEEEEECCCCCCHHHHHHHHHHHCC-CEEECCCCCC-
Q ss_conf 3215533888730477887567667999999998678-772001289961644203468999986204-5331246765-
Q gi|254780506|r 120 DGLHVVNAGKVMIGDFTTGLVPCTPAGAILLIEQFKG-CDLSGQHAVVIGRSNLFGKPMGQLLLSRNA-TVTMAHSKTK- 196 (306)
Q Consensus 120 DGl~~~N~g~l~~~~~~~~~~PcTp~av~~ll~~y~~-i~l~Gk~vvVvGrs~~VG~Pla~lL~~~~a-tVti~hs~T~- 196 (306)
T Consensus 98 ~g-------~l-~G~NTD------~~G~~~~L~~~~~~~~~~~~~vlilGAGG-AarAv~~aL~~~g~~~i~V~NRt~~r 162 (283)
T COG0169 98 DG-------KL-RGYNTD------GIGFLRALKEFGLPVDVTGKRVLILGAGG-AARAVAFALAEAGAKRITVVNRTRER 162 (283)
T ss_pred CC-------EE-EEECCC------HHHHHHHHHHCCCCCCCCCCEEEEECCCH-HHHHHHHHHHHCCCCEEEEEECCHHH
T ss_conf 99-------79-997478------89999999850777566788899989768-99999999998699879999588899
Q ss_pred --CHHHH------------------HHHCCEEEEECCC--CC-----CCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEC
Q ss_conf --34776------------------4223573652244--32-----122010476626998311111267668856841
Q gi|254780506|r 197 --NLPEI------------------CRTADILVVAVGR--PR-----MVQVDWIKTGSLVIDVGINRINSPQLGKTVLVG 249 (306)
Q Consensus 197 --~l~~~------------------~~~ADivIsAvG~--p~-----~i~~~~vk~gavvIDvGi~~~~~~~~~~~~~~G 249 (306)
T Consensus 163 a~~La~~~~~~~~~~~~~~~~~~~~~~~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~----------- 231 (283)
T COG0169 163 AEELADLFGELGAAVEAAALADLEGLEEADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLE----------- 231 (283)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCEEEEECCCCCC-----------
T ss_conf 999999864505631102455412355457899788787778878888867766867789981118878-----------
Q ss_pred CCCH-HHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 7756-78731440089869868689999999999999998688985
Q gi|254780506|r 250 DVAD-ECKSVVGAITPVPGGVGPMTIAMLMANTVIAAYRSLGMKSP 294 (306)
Q Consensus 250 Dvd~-~~~~~a~~iTPVPGGVGp~Tva~L~~N~v~aa~~~~~~~~~ 294 (306)
T Consensus 232 -TplL~~A~~~G~~-~idG------l~Mlv~Qaa~aF~lwtg~~p~ 269 (283)
T COG0169 232 -TPLLREARAQGAK-TIDG------LGMLVHQAAEAFELWTGVEPP 269 (283)
T ss_pred -CHHHHHHHHCCCC-EECC------HHHHHHHHHHHHHHHHCCCCC
T ss_conf -8899999985990-7873------999999999999998489997