HHsearch alignment for GI: 254780506 and conserved domain: COG0287
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism].
Probab=95.52 E-value=0.032 Score=36.31 Aligned_cols=74 Identities=22% Similarity=0.302 Sum_probs=53.4
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHCCCEEECCCCC------------------CCH-HHHHHHCCEEEEECCCCCC----
Q ss_conf 01289961644203468999986204533124676------------------534-7764223573652244321----
Q gi|254780506|r 161 GQHAVVIGRSNLFGKPMGQLLLSRNATVTMAHSKT------------------KNL-PEICRTADILVVAVGRPRM---- 217 (306)
Q Consensus 161 Gk~vvVvGrs~~VG~Pla~lL~~~~atVti~hs~T------------------~~l-~~~~~~ADivIsAvG~p~~---- 217 (306)
T Consensus 3 ~~~v~IvG~Gl-iG~s~a~~l~~~g~~v~i~g~d~~~~~~~~a~~lgv~d~~~~~~~~~~~~~aDlVivavPi~~~~~~l 81 (279)
T COG0287 3 SMKVGIVGLGL-MGGSLARALKEAGLVVRIIGRDRSAATLKAALELGVIDELTVAGLAEAAAEADLVIVAVPIEATEEVL 81 (279)
T ss_pred CCEEEEECCCH-HHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCCHHHCCCHHHHHCCCCCEEEEECCHHHHHHHH
T ss_conf 64899987746-77999999997698479972477467787766358530100115554135699899957788999999
Q ss_pred --CCCCCCCCCCEEEEEEEEE
Q ss_conf --2201047662699831111
Q gi|254780506|r 218 --VQVDWIKTGSLVIDVGINR 236 (306)
Q Consensus 218 --i~~~~vk~gavvIDvGi~~ 236 (306)
T Consensus 82 ~~l~~-~l~~g~iv~Dv~S~K 101 (279)
T COG0287 82 KELAP-HLKKGAIVTDVGSVK 101 (279)
T ss_pred HHHCC-CCCCCCEEECCCCHH
T ss_conf 98630-379998897364201