HHsearch alignment for GI: 254780506 and conserved domain: COG0334

Probab=92.46  E-value=0.27  Score=29.89  Aligned_cols=84  Identities=24%  Similarity=0.238  Sum_probs=56.3

Q ss_pred             HHHHHCCCCCCHHH----CCHHHHHHHHHC--------------------CCCCCCCCCCHHHHHHHH---HHHCCCCCC
Q ss_conf             89860687435132----155338887304--------------------778875676679999999---986787720
Q gi|254780506|r  108 SIIQSIVPEKDVDG----LHVVNAGKVMIG--------------------DFTTGLVPCTPAGAILLI---EQFKGCDLS  160 (306)
Q Consensus       108 ~i~~~I~p~KDVDG----l~~~N~g~l~~~--------------------~~~~~~~PcTp~av~~ll---~~y~~i~l~  160 (306)
T Consensus       127 ~i~~~iG~~~dIpApDvgt~~~~m~wm~dey~~i~g~~~~gv~TGKp~~~GGS~~r~~aTg~Gv~~~~~~a~~~~g~~l~  206 (411)
T COG0334         127 AIYRLIGPDTDIPAPDVGTNPQDMAWMMDEYSKIVGNSAPGVFTGKPLELGGSLGRSEATGYGVFYAIREALKALGDDLE  206 (411)
T ss_pred             HHHHHCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHCCCCCC
T ss_conf             99984598767446336878999999997432002778764322776314677999865103307999999998177768


Q ss_pred             CCEEEEECCCCCCHHHHHHHHHHHCCCEEECC
Q ss_conf             01289961644203468999986204533124
Q gi|254780506|r  161 GQHAVVIGRSNLFGKPMGQLLLSRNATVTMAH  192 (306)
Q Consensus       161 Gk~vvVvGrs~~VG~Pla~lL~~~~atVti~h  192 (306)
T Consensus       207 G~rVaVQG~GN-Vg~~aa~~l~~~GAkvv~~s  237 (411)
T COG0334         207 GARVAVQGFGN-VGQYAAEKLHELGAKVVAVS  237 (411)
T ss_pred             CCEEEEECCCH-HHHHHHHHHHHCCCEEEEEE
T ss_conf             87899977628-99999999997499799997