HHsearch alignment for GI: 254780506 and conserved domain: PRK00779
>PRK00779 ornithine carbamoyltransferase; Provisional.
Probab=96.46 E-value=0.1 Score=32.77 Aligned_cols=185 Identities=17% Similarity=0.197 Sum_probs=110.2
Q ss_pred EECHHHHHHHHHHHHHHHHHHHHHHC--CCCC-----EEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCC---
Q ss_conf 00538999999999999999999836--9997-----5999996798678999999999999839700002474111---
Q gi|254780506|r 4 LIDGKVVASVLTDKIAESVAFLKKET--GVQV-----GLAVVLVGNDPASCSYVSAKTRMAKHCGFHSVQYNFPVDI--- 73 (306)
Q Consensus 4 iLdGk~iA~~i~~~lk~~i~~l~~~~--g~~P-----~LavIlvGddpaS~~Yv~~K~K~a~~lGI~~~~~~l~~~~--- 73 (306)
T Consensus 8 llsi~dls~~~i~~ll~~A~~~k~~~~~~~~~~~L~gk~v~~lF-~epSTRTr~S-Fe~A~~~LGg~~i~~~~~-~ss~~ 84 (308)
T PRK00779 8 FLSLSDLTPEELRELLELAAELKAKRKAGELYKPLKGKTLAMIF-EKPSTRTRVS-FEVGMAQLGGHAIFLSPR-DTQLG 84 (308)
T ss_pred CCCHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEE-ECCCCCHHHH-HHHHHHHCCCEEEECCCC-CCCCC
T ss_conf 58600099999999999999998666458767668998899997-0687425573-999886289389966876-56567
Q ss_pred CHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCHHH-HHHHHH
Q ss_conf 2266999999852312212588834688711378898606874351321553388873047788756766799-999999
Q gi|254780506|r 74 SQIDLENAVLSLNKDDSIHGILVQLPLPSTVSEQSIIQSIVPEKDVDGLHVVNAGKVMIGDFTTGLVPCTPAG-AILLIE 152 (306)
Q Consensus 74 se~el~~~I~~LN~d~~V~GIlvQlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~~~~PcTp~a-v~~ll~ 152 (306)
T Consensus 85 kgEsl~Dt~~~l~~~--~D~iviR~~~~~~~--~~~a~~~----~v---PVINa----~~---d~~HPtQaL~Dl~Ti~e 146 (308)
T PRK00779 85 RGEPIEDTARVLSRY--VDAIMIRTFEHETL--EELAEYS----TV---PVING----LT---DLSHPCQILADLLTIYE 146 (308)
T ss_pred CCCCHHHHHHHHHHH--CCEEEEECCCCCHH--HHHHHHC----CC---CEEEC----CC---CCCCCHHHHHHHHHHHH
T ss_conf 897899999999854--77999932430118--9998748----98---78967----88---87673899999999999
Q ss_pred HHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEECCCC----------------------CCCHHHHHHHCCEEEE
Q ss_conf 867877200128996164420346899998620453312467----------------------6534776422357365
Q gi|254780506|r 153 QFKGCDLSGQHAVVIGRSNLFGKPMGQLLLSRNATVTMAHSK----------------------TKNLPEICRTADILVV 210 (306)
Q Consensus 153 ~y~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~~atVti~hs~----------------------T~~l~~~~~~ADivIs 210 (306)
T Consensus 147 ~~-g-~l~gl~i~~vGD~~nV~~Sl~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~~~~i~~~~d~~ea~~~aDviyt 224 (308)
T PRK00779 147 HR-G-SIKGKTVAWVGDGNNVANSLLLAAALLGFDLRVATPKGYEPDPEIVAKARAIAEASIEVTHDPEEAVKGADVVYT 224 (308)
T ss_pred HH-C-CCCCCEEEEECCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHCCCCEEEE
T ss_conf 83-8-677875999838745399999999977998999888302789999999997468958998399999625999985
Q ss_pred E
Q ss_conf 2
Q gi|254780506|r 211 A 211 (306)
Q Consensus 211 A 211 (306)
T Consensus 225 d 225 (308)
T PRK00779 225 D 225 (308)
T ss_pred E
T ss_conf 0