HHsearch alignment for GI: 254780506 and conserved domain: PRK02102
>PRK02102 ornithine carbamoyltransferase; Validated.
Probab=97.29 E-value=0.012 Score=39.14 Aligned_cols=153 Identities=18% Similarity=0.154 Sum_probs=96.7
Q ss_pred EEEEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCH----HHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHH
Q ss_conf 99999679867899999999999983970000247411122----66999999852312212588834688711378898
Q gi|254780506|r 35 LAVVLVGNDPASCSYVSAKTRMAKHCGFHSVQYNFPVDISQ----IDLENAVLSLNKDDSIHGILVQLPLPSTVSEQSII 110 (306)
Q Consensus 35 LavIlvGddpaS~~Yv~~K~K~a~~lGI~~~~~~l~~~~se----~el~~~I~~LN~d~~V~GIlvQlPLP~~id~~~i~ 110 (306)
T Consensus 48 ~v~~lF-~epSTRTR~S-Fe~A~~~LGg~~i~l~~--~~s~~~kGEs~~Dt~~~Ls~~--~D~iviR~~--~~~~~~~~a 119 (331)
T PRK02102 48 NIALIF-EKTSTRTRCA-FEVAAIDLGAHVTYLGP--NDIQLGKKESMEDTARVLGRM--YDGIEYRGF--SQEIVEELA 119 (331)
T ss_pred EEEEEE-CCCCCHHHHH-HHHHHHHCCCEEEECCC--CCCCCCCCCCHHHHHHHHHHH--CCEEEEECC--CHHHHHHHH
T ss_conf 899995-5897305999-99999985990995787--556377898989999999975--167899627--728999999
Q ss_pred HHCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCHHH-HHHHHHHHCCCCCCCCEEEEECCC-CCCHHHHHHHHHHHCCCE
Q ss_conf 606874351321553388873047788756766799-999999867877200128996164-420346899998620453
Q gi|254780506|r 111 QSIVPEKDVDGLHVVNAGKVMIGDFTTGLVPCTPAG-AILLIEQFKGCDLSGQHAVVIGRS-NLFGKPMGQLLLSRNATV 188 (306)
Q Consensus 111 ~~I~p~KDVDGl~~~N~g~l~~~~~~~~~~PcTp~a-v~~ll~~y~~i~l~Gk~vvVvGrs-~~VG~Pla~lL~~~~atV 188 (306)
T Consensus 120 ~~~~----v---PVIN------~~-~~~~HPtQ~L~Dl~Ti~e~~-g-~l~gl~i~~vGD~~nnVa~S~~~~~~~lG~~v 183 (331)
T PRK02102 120 KYSG----V---PVWN------GL-TDEWHPTQMLADFMTMKEHF-G-PLKGLKLAYLGDGRNNMANSLLVGGAKLGMDV 183 (331)
T ss_pred HHCC----C---CEEC------CC-CCCCCHHHHHHHHHHHHHHH-C-CCCCCEEEEECCCCCCHHHHHHHHHHHCCCEE
T ss_conf 7479----8---6454------88-87648799999999999983-8-75677389978876424668999998559859
Q ss_pred EECCCCC-------------------------CCHHHHHHHCCEEEEE
Q ss_conf 3124676-------------------------5347764223573652
Q gi|254780506|r 189 TMAHSKT-------------------------KNLPEICRTADILVVA 211 (306)
Q Consensus 189 ti~hs~T-------------------------~~l~~~~~~ADivIsA 211 (306)
T Consensus 184 ~~~~P~~~~p~~~~~~~~~~~~~~~g~~i~~~~d~~ea~~~aDVvytd 231 (331)
T PRK02102 184 RICAPKSLWPEEELVAQAKEIAKETGAKITITEDVEEAVKGADVIYTD 231 (331)
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHCCEEEEEECHHHHHCCCCEEEEE
T ss_conf 997586448897999999999998299389995666663357656530