HHsearch alignment for GI: 254780506 and conserved domain: PRK04284

>PRK04284 ornithine carbamoyltransferase; Provisional.
Probab=96.82  E-value=0.06  Score=34.38  Aligned_cols=149  Identities=13%  Similarity=0.093  Sum_probs=90.2

Q ss_pred             CCHHHHHHHHHHHHHHHHCCCCEEECCCCCC-C-CHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCH
Q ss_conf             9867899999999999983970000247411-1-2266999999852312212588834688711378898606874351
Q gi|254780506|r   42 NDPASCSYVSAKTRMAKHCGFHSVQYNFPVD-I-SQIDLENAVLSLNKDDSIHGILVQLPLPSTVSEQSIIQSIVPEKDV  119 (306)
Q Consensus        42 ddpaS~~Yv~~K~K~a~~lGI~~~~~~l~~~-~-se~el~~~I~~LN~d~~V~GIlvQlPLP~~id~~~i~~~I~p~KDV  119 (306)
T Consensus        53 ~epSTRTR~SF-E~A~~~LGg~~i~l~~~~s~~~kgEsi~DT~~vls~~--~D~iv~R~~~~~~~--~~~a~~----s~v  123 (332)
T PRK04284         53 EKDSTRTRCAF-EVAAHDQGAHVTYLGPTGSQMGKKETTKDTARVLGGM--YDGIEYRGFSQRTV--ETLAEY----SGV  123 (332)
T ss_pred             CCCCCHHHHHH-HHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHH--CCEEEEECCCHHHH--HHHHHH----CCC
T ss_conf             37972069999-9999985996898488645278877899999999962--88899953461899--999986----799


Q ss_pred             HHCCHHHHHHHHHCCCCCCCCCCCHHH-HHHHHHHHCCCCCCCCEEEEECCC-CCCHHHHHHHHHHHCCCEEECCCCC--
Q ss_conf             321553388873047788756766799-999999867877200128996164-4203468999986204533124676--
Q gi|254780506|r  120 DGLHVVNAGKVMIGDFTTGLVPCTPAG-AILLIEQFKGCDLSGQHAVVIGRS-NLFGKPMGQLLLSRNATVTMAHSKT--  195 (306)
Q Consensus       120 DGl~~~N~g~l~~~~~~~~~~PcTp~a-v~~ll~~y~~i~l~Gk~vvVvGrs-~~VG~Pla~lL~~~~atVti~hs~T--  195 (306)
T Consensus       124 ---PViN------g-~~~~~HPtQ~L~D~~Ti~E~~-~~~~~~lkva~vGD~~nnVa~S~~~~~~~~g~~~~~~~P~~~~  192 (332)
T PRK04284        124 ---PVWN------G-LTDEDHPTQVLADFLTAKEVL-KKPYADINFTYVGDGRNNVANALMQGAAIMGMNFHLVCPKELN  192 (332)
T ss_pred             ---CEEE------C-CCCCCCCHHHHHHHHHHHHHH-CCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf             ---9886------8-998777268998889999971-3665672899967988651157999999759937997585558


Q ss_pred             -----------------------CCHHHHHHHCCEEEE
Q ss_conf             -----------------------534776422357365
Q gi|254780506|r  196 -----------------------KNLPEICRTADILVV  210 (306)
Q Consensus       196 -----------------------~~l~~~~~~ADivIs  210 (306)
T Consensus       193 p~~~~~~~~~~~~~~~g~~~~~~~d~~~av~~aDviyt  230 (332)
T PRK04284        193 PTDELLNRCKNIAAENGGNILITDDIDQGVKGSDVIYT  230 (332)
T ss_pred             CCHHHHHHHHHHHHHCCCEEEEECCHHHHHCCCCEEEE
T ss_conf             89999999999999719908995149888525889987