HHsearch alignment for GI: 254780506 and conserved domain: PRK04523
>PRK04523 N-acetylornithine carbamoyltransferase; Reviewed.
Probab=95.11 E-value=0.36 Score=29.02 Aligned_cols=193 Identities=17% Similarity=0.192 Sum_probs=109.5
Q ss_pred CCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCEE----EEEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCC---
Q ss_conf 96500538999999999999999999836999759----99996798678999999999999839700002474111---
Q gi|254780506|r 1 MGSLIDGKVVASVLTDKIAESVAFLKKETGVQVGL----AVVLVGNDPASCSYVSAKTRMAKHCGFHSVQYNFPVDI--- 73 (306)
Q Consensus 1 Ma~iLdGk~iA~~i~~~lk~~i~~l~~~~g~~P~L----avIlvGddpaS~~Yv~~K~K~a~~lGI~~~~~~l~~~~--- 73 (306)
T Consensus 3 mkhllsi~dls~~ei~~ll~~A~~~k~~-~~~~~L~gk~v~~lF-~epSTRTR-~SFE~A~~rLGg~~i~l~~~~ss~~~ 79 (335)
T PRK04523 3 LKHFLNTQDWSRAELDALLTQAAAFKRN-KLGHALKGKSIALVF-FNPSLRTR-TSFELGAFQLGGHAIVLQPGKDAWPI 79 (335)
T ss_pred CCCCCCHHHCCHHHHHHHHHHHHHHHCC-CCCCCCCCCEEEEEE-CCCCCCHH-HHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf 5541761118999999999999999708-998778999899997-37983049-99999999869988984687764322
Q ss_pred -----------CHHHHHHHHHHHCCCCCCCEEEEECCCCCCH-----HHHHHHHHCCCCCCHHHCCHHHHHHHHHCCCCC
Q ss_conf -----------2266999999852312212588834688711-----378898606874351321553388873047788
Q gi|254780506|r 74 -----------SQIDLENAVLSLNKDDSIHGILVQLPLPSTV-----SEQSIIQSIVPEKDVDGLHVVNAGKVMIGDFTT 137 (306)
Q Consensus 74 -----------se~el~~~I~~LN~d~~V~GIlvQlPLP~~i-----d~~~i~~~I~p~KDVDGl~~~N~g~l~~~~~~~ 137 (306)
T Consensus 80 ~~~~g~~~~~~~~Esl~Dt~~vls~y--~D~iviR~~~-~~~~~~~~~~~~~~~~~a~~s~v---PVIN~-----g---~ 145 (335)
T PRK04523 80 EFNLGTVMDGDTEEHIAEVARVLSRY--VDLIGVRAFP-KFVDWEEDRQDPVLNSFAKYSTV---PVINM-----E---T 145 (335)
T ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHC--CCEEEEECCC-CCCCCHHHHHHHHHHHHHHHCCC---CEECC-----C---C
T ss_conf 24555322577776699999999843--9899993253-23420000136899999986688---73068-----8---8
Q ss_pred CCCCCCHHH-HHHHHHHHCCCCCCCCEEEEEC--CCC----CCHHHHHHHHHHHCCCEEECCCCC---------------
Q ss_conf 756766799-9999998678772001289961--644----203468999986204533124676---------------
Q gi|254780506|r 138 GLVPCTPAG-AILLIEQFKGCDLSGQHAVVIG--RSN----LFGKPMGQLLLSRNATVTMAHSKT--------------- 195 (306)
Q Consensus 138 ~~~PcTp~a-v~~ll~~y~~i~l~Gk~vvVvG--rs~----~VG~Pla~lL~~~~atVti~hs~T--------------- 195 (306)
T Consensus 146 ~~HPtQaL~Dl~Ti~e~~-g~~~~~~~~~i~~~~~~~~~~~~va~S~~~~~~~~g~~v~~~~P~~~~~~~~~~~~~~~~~ 224 (335)
T PRK04523 146 ITHPCQELAHALALQEHF-GTPLRGKKYVLTWTYHPKPLNTAVANSALTIATRMGMDVTLLCPTPDYILDERYMDWAEQN 224 (335)
T ss_pred CCCCHHHHHHHHHHHHHH-CCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHH
T ss_conf 888489999999999983-8633698799998514774414698999999997499089981785467998999999999
Q ss_pred -----------CCHHHHHHHCCEEEEE
Q ss_conf -----------5347764223573652
Q gi|254780506|r 196 -----------KNLPEICRTADILVVA 211 (306)
Q Consensus 196 -----------~~l~~~~~~ADivIsA 211 (306)
T Consensus 225 ~~~~g~~v~~~~d~~~al~~aDvvyt~ 251 (335)
T PRK04523 225 AAESGGSVQVSHDIDSAYAGADVVYAK 251 (335)
T ss_pred HHHCCCEEEEECCHHHHHHCCCHHHHH
T ss_conf 997298599981899997323246666