HHsearch alignment for GI: 254780506 and conserved domain: PRK12749
>PRK12749 quinate/shikimate dehydrogenase; Reviewed.
Probab=97.98 E-value=0.00058 Score=48.42 Aligned_cols=214 Identities=16% Similarity=0.218 Sum_probs=129.3
Q ss_pred HHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCHHHCCHHHHHHH
Q ss_conf 99999999839700002474111226699999985231221258883468871137889860687435132155338887
Q gi|254780506|r 51 SAKTRMAKHCGFHSVQYNFPVDISQIDLENAVLSLNKDDSIHGILVQLPLPSTVSEQSIIQSIVPEKDVDGLHVVNAGKV 130 (306)
Q Consensus 51 ~~K~K~a~~lGI~~~~~~l~~~~se~el~~~I~~LN~d~~V~GIlvQlPLP~~id~~~i~~~I~p~KDVDGl~~~N~g~l 130 (306)
T Consensus 24 ~ihn~~f~~~gl~~~Y~~~--~v~~~~l~~~~~~l~~-~~~~G~nVTiP~K~~~--~~~~D~l~~~A--~~igAvNT--i 94 (288)
T PRK12749 24 EMQNKALEKAGLPFTYMAF--EVDNDSFPGAIEGLKA-LKMRGTGVSMPNKQLA--CEYVDELTPAA--KLVGAINT--I 94 (288)
T ss_pred HHHHHHHHHCCCCEEEEEE--ECCHHHHHHHHHHHHH-CCCCEEEEHHHHHHHH--HHHHCCCCHHH--HHHHCEEE--E
T ss_conf 9999999986998199988--7788889999999875-7998999706229999--98844314889--97403448--9
Q ss_pred HHCCCC-CCCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC-CEEECCCCCCC-----------
Q ss_conf 304778-87567667999999998678772001289961644203468999986204-53312467653-----------
Q gi|254780506|r 131 MIGDFT-TGLVPCTPAGAILLIEQFKGCDLSGQHAVVIGRSNLFGKPMGQLLLSRNA-TVTMAHSKTKN----------- 197 (306)
Q Consensus 131 ~~~~~~-~~~~PcTp~av~~ll~~y~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~~a-tVti~hs~T~~----------- 197 (306)
T Consensus 95 ~~~~g~l~G~-NTD~~G~~~~l~~~-~~~~~~k~~lIlGaGG-aa~Ai~~~l~~~g~~~i~i~nR~~~~~~~~~~~a~~~ 171 (288)
T PRK12749 95 VNDDGYLRGY-NTDGTGHIRAIKES-GFDIKGKTMVLLGAGG-ASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRV 171 (288)
T ss_pred EEECCEEEEE-ECCCHHHHHHHHHC-CCCCCCCEEEEEECCH-HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH
T ss_conf 9229989999-47708999999980-9985677689982345-8899999999769987999968855789999999986
Q ss_pred ------------------HHHHHHHCCEEEEECC--CCC------CCCCCCCCCCCEEEEEEEEECCCCCCCCCEEECCC
Q ss_conf ------------------4776422357365224--432------12201047662699831111126766885684177
Q gi|254780506|r 198 ------------------LPEICRTADILVVAVG--RPR------MVQVDWIKTGSLVIDVGINRINSPQLGKTVLVGDV 251 (306)
Q Consensus 198 ------------------l~~~~~~ADivIsAvG--~p~------~i~~~~vk~gavvIDvGi~~~~~~~~~~~~~~GDv 251 (306)
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~dliiN~Tp~Gm~~~~~~~~~~~~~~~~~~~~v~D~vY~P~~T------------ 239 (288)
T PRK12749 172 NENTDCVVTVTDLADQQAFAEALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVYNPHMT------------ 239 (288)
T ss_pred HHCCCCEEEECCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHCCCCCEEEEEECCCHHH------------
T ss_conf 32257557743410145677651346555236457778776445566464569888999972395662------------
Q ss_pred CHHHHHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 5678731440089869868689999999999999998688985
Q gi|254780506|r 252 ADECKSVVGAITPVPGGVGPMTIAMLMANTVIAAYRSLGMKSP 294 (306)
Q Consensus 252 d~~~~~~a~~iTPVPGGVGp~Tva~L~~N~v~aa~~~~~~~~~ 294 (306)
T Consensus 240 ~ll~~a~~~G~~~i~G------l~MLv~Qa~~~f~lwTG~~~p 276 (288)
T PRK12749 240 KLLQQAQQAGCKTIDG------YGMLLWQGAEQFTLWTGKDFP 276 (288)
T ss_pred HHHHHHHHCCCCEECH------HHHHHHHHHHHHHHHHCCCCC
T ss_conf 9999999883916167------999999999999998199999