HHsearch alignment for GI: 254780506 and conserved domain: PRK13940
>PRK13940 glutamyl-tRNA reductase; Provisional.
Probab=98.28 E-value=6e-06 Score=62.19 Aligned_cols=97 Identities=21% Similarity=0.370 Sum_probs=75.0
Q ss_pred CHHHHHHHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC-EEECCCCC------------------CCHHHHHH
Q ss_conf 679999999986787720012899616442034689999862045-33124676------------------53477642
Q gi|254780506|r 143 TPAGAILLIEQFKGCDLSGQHAVVIGRSNLFGKPMGQLLLSRNAT-VTMAHSKT------------------KNLPEICR 203 (306)
Q Consensus 143 Tp~av~~ll~~y~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~~at-Vti~hs~T------------------~~l~~~~~ 203 (306)
T Consensus 164 v~~~Av~la~~~~-~~l~~~~vlvvGaGe-m~~l~~k~L~~~g~~~i~v~nRt~~ra~~la~~~~~~~~~~~~~l~~~l~ 241 (414)
T PRK13940 164 VAFSAITLAKRQL-DNISSKNVLIIGAGQ-TGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLSELPQLIK 241 (414)
T ss_pred HHHHHHHHHHHHC-CCCCCCEEEEECCCH-HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 8999999999862-871228389966864-78999999997699879994575677999999708885016999999986
Q ss_pred HCCEEEEECCCCCC-CCCCCCCCC-CEEEEEEEEECCCCC
Q ss_conf 23573652244321-220104766-269983111112676
Q gi|254780506|r 204 TADILVVAVGRPRM-VQVDWIKTG-SLVIDVGINRINSPQ 241 (306)
Q Consensus 204 ~ADivIsAvG~p~~-i~~~~vk~g-avvIDvGi~~~~~~~ 241 (306)
T Consensus 242 ~aDivisaT~a~~~ii~~~~~~~~p~~~iDLavPRdidp~ 281 (414)
T PRK13940 242 KADIIIAAVNVLEYIVTCKYVGDKPRVFIDISIPQALDPK 281 (414)
T ss_pred HCCEEEEECCCCHHHCCHHHHCCCCEEEEEECCCCCCCHH
T ss_conf 3887998169824440486645797589984588888843