HHsearch alignment for GI: 254780506 and conserved domain: TIGR01316

>TIGR01316 gltA glutamate synthase (NADPH), homotetrameric; InterPro: IPR006004 One pathway for the assimilation of ammonia and glutamate biosynthesis involves homotetrameric glutamate synthase (1.4.1.13 from EC) which transfers the amide group of glutamine to 2-oxoglutarate to yield two molecules of glutamate . 2 L-glutamate + NADP^+ = L-glutamine + 2-oxoglutarate + NADPH + H^+. .
Probab=92.03  E-value=0.45  Score=28.32  Aligned_cols=150  Identities=21%  Similarity=0.345  Sum_probs=88.0

Q ss_pred             HHHHHHHHHHCCCCEEECCC-CCCCCHHHHHHHHHHHCCCCCCCEEEEECC--CCCCHHHHHHHHHCCCCCCHHHCCHHH
Q ss_conf             99999999983970000247-411122669999998523122125888346--887113788986068743513215533
Q gi|254780506|r   50 VSAKTRMAKHCGFHSVQYNF-PVDISQIDLENAVLSLNKDDSIHGILVQLP--LPSTVSEQSIIQSIVPEKDVDGLHVVN  126 (306)
Q Consensus        50 v~~K~K~a~~lGI~~~~~~l-~~~~se~el~~~I~~LN~d~~V~GIlvQlP--LP~~id~~~i~~~I~p~KDVDGl~~~N  126 (306)
T Consensus       195 ~~~E~k~LkklGv~fr~~~lvGkt~TL~eL~~---~YG----fDAVFIgtGAG~pkl~Ni--------pG~~L~gvysA~  259 (462)
T TIGR01316       195 VETEVKKLKKLGVKFRTDYLVGKTVTLEELLE---KYG----FDAVFIGTGAGLPKLLNI--------PGEELKGVYSAN  259 (462)
T ss_pred             HHHHHHHHHHCCEEEEECCEECCCHHHHHHHH---HCC----CCEEEEEECCCCCEECCC--------CCHHHCCHHHHH
T ss_conf             89888876326637994437505112888887---519----707999506898700167--------843434002234


Q ss_pred             HHHHHHCCCCCCCCCCCHHHHHHHHHHH----CCCCC-CCCEEEEECCCCCCHHHHHHHHHHHCCC-EEECCCCCCCH--
Q ss_conf             8887304778875676679999999986----78772-0012899616442034689999862045-33124676534--
Q gi|254780506|r  127 AGKVMIGDFTTGLVPCTPAGAILLIEQF----KGCDL-SGQHAVVIGRSNLFGKPMGQLLLSRNAT-VTMAHSKTKNL--  198 (306)
Q Consensus       127 ~g~l~~~~~~~~~~PcTp~av~~ll~~y----~~i~l-~Gk~vvVvGrs~~VG~Pla~lL~~~~at-Vti~hs~T~~l--  198 (306)
T Consensus       260 ----------d-f-----LtR~nLmKAyefp~~dtPv~~gK~vvviGgGnt-AvD~artAlRLGaEqvh~~YRrtRedmt  322 (462)
T TIGR01316       260 ----------D-F-----LTRVNLMKAYEFPKKDTPVEVGKKVVVIGGGNT-AVDAARTALRLGAEQVHVVYRRTREDMT  322 (462)
T ss_pred             ----------H-H-----HHHHHHHHHHCCCCCCCCEEECCEEEEECCCHH-HHHHHHHHHHCCCCEEEEEEECCCCCCH
T ss_conf             ----------6-8-----877777654236678875654476899878536-7877766645284236998854777513


Q ss_pred             -----------------------------------------------------------HHHHHHCCEEEEECCC-CCCC
Q ss_conf             -----------------------------------------------------------7764223573652244-3212
Q gi|254780506|r  199 -----------------------------------------------------------PEICRTADILVVAVGR-PRMV  218 (306)
Q Consensus       199 -----------------------------------------------------------~~~~~~ADivIsAvG~-p~~i  218 (306)
T Consensus       323 Ar~EEi~ha~eEGVkfhfl~Qpve~iGdE~G~V~avkf~~~~~~E~~dsg~~r~~p~~~~e~~leaD~VI~AiG~~~Npi  402 (462)
T TIGR01316       323 AREEEIKHAEEEGVKFHFLLQPVEVIGDEEGEVKAVKFEKTELLEERDSGEKRKVPVTDEEVKLEADAVIVAIGQEANPI  402 (462)
T ss_pred             HHHHHHHHHHHCCCEEEEEECCEEEEECCCCEEEEEEEEECCCCCHHHCCCCEEEECCCCCEEEEECEEEEEECCCCCCE
T ss_conf             66999998853892899874216898657651899998853768811457812430499517886265999745898830


Q ss_pred             CCCC---CC---CCCEEEE
Q ss_conf             2010---47---6626998
Q gi|254780506|r  219 QVDW---IK---TGSLVID  231 (306)
Q Consensus       219 ~~~~---vk---~gavvID  231 (306)
T Consensus       403 ~~e~~r~lkt~~~GTIvVd  421 (462)
T TIGR01316       403 IAEDSRSLKTSKRGTIVVD  421 (462)
T ss_pred             EEECCCEEEECCCCCEEEC
T ss_conf             3306733334588657874