HHsearch alignment for GI: 254780506 and conserved domain: TIGR03451
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=94.32 E-value=0.25 Score=30.11 Aligned_cols=94 Identities=22% Similarity=0.281 Sum_probs=61.5
Q ss_pred CCCCCHHHHH-HHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCC-EEECCC-------------------CCCC
Q ss_conf 5676679999-999986787720012899616442034689999862045-331246-------------------7653
Q gi|254780506|r 139 LVPCTPAGAI-LLIEQFKGCDLSGQHAVVIGRSNLFGKPMGQLLLSRNAT-VTMAHS-------------------KTKN 197 (306)
Q Consensus 139 ~~PcTp~av~-~ll~~y~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~~at-Vti~hs-------------------~T~~ 197 (306)
T Consensus 156 ~l~~~~~~~~~~~~~-~~~~-~~g~~VlV~GaG~-iGl~a~~~ak~~Ga~~Vi~~d~~~~rl~~A~~lGa~~~i~~~~~~ 232 (358)
T TIGR03451 156 LLGCGVMAGLGAAVN-TGGV-KRGDSVAVIGCGG-VGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTD 232 (358)
T ss_pred HHHCCHHHHHHHHHH-HCCC-CCCCEEEEECCCH-HHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCEEEECCCCCC
T ss_conf 740214454688986-4079-9998899967376-999999999983991899991988999999965990997399878
Q ss_pred HHHHHH------HCCEEEEECCCCCCCCC--CCCCCCCEEEEEEEE
Q ss_conf 477642------23573652244321220--104766269983111
Q gi|254780506|r 198 LPEICR------TADILVVAVGRPRMVQV--DWIKTGSLVIDVGIN 235 (306)
Q Consensus 198 l~~~~~------~ADivIsAvG~p~~i~~--~~vk~gavvIDvGi~ 235 (306)
T Consensus 233 ~~~~v~~~t~g~G~Dvvie~~G~~~~~~~al~~~~~gG~iv~~G~~ 278 (358)
T TIGR03451 233 PVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVP 278 (358)
T ss_pred HHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 8999999858988749999999989999999976279699999225