HHsearch alignment for GI: 254780506 and conserved domain: pfam01488
>pfam01488 Shikimate_DH Shikimate / quinate 5-dehydrogenase. This family contains both shikimate and quinate dehydrogenases. Shikimate 5-dehydrogenase catalyses the conversion of shikimate to 5-dehydroshikimate. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites 3-dehydroquinate and dehydroshikimate.
Probab=98.45 E-value=4.6e-07 Score=69.99 Aligned_cols=92 Identities=27% Similarity=0.542 Sum_probs=72.2
Q ss_pred HHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC-CEEECCCCC--------------------CCHHHHHHHCCEEEE
Q ss_conf 98678772001289961644203468999986204-533124676--------------------534776422357365
Q gi|254780506|r 152 EQFKGCDLSGQHAVVIGRSNLFGKPMGQLLLSRNA-TVTMAHSKT--------------------KNLPEICRTADILVV 210 (306)
Q Consensus 152 ~~y~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~~a-tVti~hs~T--------------------~~l~~~~~~ADivIs 210 (306)
T Consensus 4 ~~~~~-~l~~~~vlVIGaG~-~~~~~~~~L~~~g~~~i~v~nRt~~ka~~la~~~~~~~~~~~~~~~l~~~l~~~DivI~ 81 (134)
T pfam01488 4 KKIFG-DLKGKKVLLIGAGE-MARLAAKHLLSKGAKKITIANRTLEKAKELAEEFGGEEVEALPLDELEELLAEADIVIS 81 (134)
T ss_pred HHHHC-CCCCCEEEEECCCH-HHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHCCEEEE
T ss_conf 77638-81489899999609-99999999997599889995475789999999849972589851354413631999999
Q ss_pred ECCCCC-CCCCCCCCC---CCEEEEEEEEECCCCCCCCCEEECCCCHHHHHH
Q ss_conf 224432-122010476---626998311111267668856841775678731
Q gi|254780506|r 211 AVGRPR-MVQVDWIKT---GSLVIDVGINRINSPQLGKTVLVGDVADECKSV 258 (306)
Q Consensus 211 AvG~p~-~i~~~~vk~---gavvIDvGi~~~~~~~~~~~~~~GDvd~~~~~~ 258 (306)
T Consensus 82 aT~s~~~ii~~~~~~~~~~~~~iiDLavPr-------------nvd~~v~~l 120 (134)
T pfam01488 82 ATSAPTPIITKEMVEEALKGLLFVDIAVPR-------------DIEPEVGEL 120 (134)
T ss_pred ECCCCCCEECHHHHHHCCCCEEEEEECCCC-------------CCCHHHCCC
T ss_conf 259997364899997443985999834788-------------866545456