HHsearch alignment for GI: 254780507 and conserved domain: PRK06654
>PRK06654 fliL flagellar basal body-associated protein FliL; Reviewed.
Probab=98.68 E-value=7.8e-08 Score=65.41 Aligned_cols=90 Identities=14% Similarity=0.160 Sum_probs=70.2
Q ss_pred CCCCCCEEEEEECCCCEEEEEEEEEEEEEC--HHHHHHHHH---HHHHHHHHHHHHCCCHHHHHCCCCCCHHHHHHHHHH
Q ss_conf 111585078764068623699999999827--579976443---999999999984582345303013698999999999
Q gi|254780507|r 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIVN--DSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 (176)
Q Consensus 45 yVkl~~i~VPvI~dg~v~~yv~~~l~~eV~--~~~~~~~~~---p~i~D~~~~~L~~~~~~D~~~~~~~~l~~lk~~I~~ 119 (176)
T Consensus 81 Y~~~~e~r~-nTaD~~~at~V-v~~aLGY~~n~k~l~~EL~~R~v~lkD~i~~yfs~kT~~ELrn-----e~qiK~EIk~ 153 (177)
T PRK06654 81 YESIDEIRG-NTADAPPKTFV-VKLALGYAENNVNILQELGRQKVRLKDIIREYFSQRTGQEIKN-----ESQIKAEIKA 153 (177)
T ss_pred HHHCCHHCC-CCCCCCCCEEE-EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHH
T ss_conf 431133104-55667872189-9987424678877999997648589999999984510998751-----8999999999
Q ss_pred HHHHHHCCCCEEEEEEEEECCC
Q ss_conf 9999958671455232011136
Q gi|254780507|r 120 DLNSRLGSQFISEVLIDELNYL 141 (176)
Q Consensus 120 ~vN~~lG~~~V~DVLi~~f~y~ 141 (176)
T Consensus 154 ~IN~IL~~gkIkdI~FTq~di~ 175 (177)
T PRK06654 154 RINSILRNGEIKEIALTQIDIF 175 (177)
T ss_pred HHHHHHHCCCEEEEEEEEEEEE
T ss_conf 9998874286006987665430