BLAST/PSIBLAST alignment of GI: 254780507 and GI: 116250512 at iteration 1
>gi|116250512|ref|YP_766350.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 179
>gi|115255160|emb|CAK06234.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 179
 Score = 92.0 bits (227), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 87/146 (59%), Gaps = 7/146 (4%)

Query: 1   MLKFLFSGIWISVVTLISFYM-LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59
           M+K + +GIW+  +TL S Y  ++L +            A++   ++K E +++P + NG
Sbjct: 1   MIKLVLTGIWVCAITLASVYFSVYLATAPAPAATDSKQSALE---LVKGETITVPIIGNG 57

Query: 60  VLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116
            +  YFL ++SF++N    +     L E+ TD L++LL G  M D   IK+F     R++
Sbjct: 58  AITGYFLGRVSFMMNKDMLKGVTLPLSEMTTDELFSLLVGNKMVDIAHIKSFDPKAFREE 117

Query: 117 IKEDLNSRLGSQFISEVLIDELNYLS 142
           IK+ +N RLG +++++V++++L+YLS
Sbjct: 118 IKKGMNERLGGEYVADVMLEQLDYLS 143