BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780507|ref|YP_003064920.1| hypothetical protein
CLIBASIA_01970 [Candidatus Liberibacter asiaticus str. psy62]
(176 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780507|ref|YP_003064920.1| hypothetical protein CLIBASIA_01970 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040184|gb|ACT56980.1| hypothetical protein CLIBASIA_01970 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 176
Score = 355 bits (910), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV
Sbjct: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120
LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED
Sbjct: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120
Query: 121 LNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEPLK 176
LNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEPLK
Sbjct: 121 LNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEPLK 176
>gi|315122296|ref|YP_004062785.1| hypothetical protein CKC_02740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495698|gb|ADR52297.1| hypothetical protein CKC_02740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 191
Score = 237 bits (605), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/172 (65%), Positives = 140/172 (81%)
Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61
++F FSGIWIS++T+ SFY+LFLRS+D +E+ P ++ ++I ELV+IPS+SNG+L
Sbjct: 17 VEFFFSGIWISIITIASFYILFLRSVDPQIESSKPLTTEQSIHMITGELVAIPSISNGIL 76
Query: 62 QAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDL 121
QAYF VKLSFIVND Q + YLKEI+TDYLYTLLSGPPMGD VQIK+FG DN RKKIKEDL
Sbjct: 77 QAYFFVKLSFIVNDRQSKYYLKEISTDYLYTLLSGPPMGDIVQIKSFGMDNFRKKIKEDL 136
Query: 122 NSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKE 173
N +LGSQFIS+VLI+ELNYLSI D+R NC L S+LM QK SL++K K+
Sbjct: 137 NLKLGSQFISDVLINELNYLSIADIRLNCFHLSDKESNLMAQKKSLLDKAKD 188
>gi|163758044|ref|ZP_02165132.1| hypothetical protein HPDFL43_00425 [Hoeflea phototrophica DFL-43]
gi|162284333|gb|EDQ34616.1| hypothetical protein HPDFL43_00425 [Hoeflea phototrophica DFL-43]
Length = 185
Score = 100 bits (248), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 95/178 (53%), Gaps = 10/178 (5%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVP-PLAIKNTNIIKSELVSIPSVSNG 59
M+K L +G+WISVV L S Y F M E+ P P I+ ++ SIP +S G
Sbjct: 1 MIKLLITGVWISVVALASVY--FSVQMANTPEDEEPVPALFGGLETIRGDVTSIPVISGG 58
Query: 60 VLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116
+ YFL +LS+ ++ S+ +K++ TD LYT L G + DF +K F + +
Sbjct: 59 RVTGYFLTRLSYTIDPSKAALMTIPVKDLVTDALYTSLVGDNLIDFPNMKRFDLEGFKAH 118
Query: 117 IKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174
I++ +N RLG + +VL+++++YLS D+RSN +L ++G + +P
Sbjct: 119 IRDSINERLGDKVFHDVLVEQIDYLSKEDIRSNM----GGGGNLNIKEGDPVGSEGKP 172
>gi|190890394|ref|YP_001976936.1| hypothetical protein RHECIAT_CH0000769 [Rhizobium etli CIAT 652]
gi|218516754|ref|ZP_03513594.1| hypothetical protein Retl8_25653 [Rhizobium etli 8C-3]
gi|190695673|gb|ACE89758.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 179
Score = 95.1 bits (235), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 87/153 (56%), Gaps = 5/153 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +G+W+ +TL S Y F M T ++K E +++P + +G
Sbjct: 1 MVKLVLTGVWVCAITLASVY--FSVYMATAPAPAATDSKQSALELVKGETITVPVIGDGA 58
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL ++SF++N + L E+ TD L++LL G M D IK+F R++I
Sbjct: 59 ITGYFLGRISFMMNKDMLKGVTLPLTEMTTDELFSLLVGNKMVDLAHIKSFDAKAFREEI 118
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNC 150
K+ +N RLG ++++EV++++L+YLS +++ N
Sbjct: 119 KKGMNERLGGEYVAEVMLEQLDYLSKEEVKQNA 151
>gi|218509489|ref|ZP_03507367.1| hypothetical protein RetlB5_19254 [Rhizobium etli Brasil 5]
Length = 179
Score = 94.4 bits (233), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 87/153 (56%), Gaps = 5/153 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +G+W+ +TL S Y F M T ++K E +++P + +G
Sbjct: 1 MVKLVLTGVWVCAITLASVY--FSVYMATAPAPAATDSKQSALELVKGETITVPVIGDGA 58
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL ++SF++N + L E+ TD L++LL G M D IK+F R++I
Sbjct: 59 ITGYFLGRISFMMNKDLLKGVTLPLTEMTTDELFSLLVGNKMVDLAHIKSFDAKAFRQEI 118
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNC 150
K+ +N RLG ++++EV++++L+YLS +++ N
Sbjct: 119 KKGMNERLGGEYVAEVMLEQLDYLSKEEVKQNA 151
>gi|209547958|ref|YP_002279875.1| hypothetical protein Rleg2_0350 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533714|gb|ACI53649.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 179
Score = 93.6 bits (231), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 91/153 (59%), Gaps = 7/153 (4%)
Query: 1 MLKFLFSGIWISVVTLISFYM-LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59
M+K + +G+W+ +TL S Y ++L + A++ ++K E +++P + NG
Sbjct: 1 MIKLVLTGVWVCAITLASVYFSVYLATAPAPAATDSKQSALE---LVKGETITVPIIGNG 57
Query: 60 VLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116
+ YFL ++SF++N + L E+ TD L++LL G M D IK+F R++
Sbjct: 58 AITGYFLGRVSFMMNKEMLKGVTLPLAEMTTDELFSLLVGNKMVDIAHIKSFDPKAFREE 117
Query: 117 IKEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149
IK+ +N RLG +++++V++++L+YLS D++ +
Sbjct: 118 IKKGMNERLGGEYVADVMLEQLDYLSKEDVKES 150
>gi|110632628|ref|YP_672836.1| hypothetical protein Meso_0267 [Mesorhizobium sp. BNC1]
gi|110283612|gb|ABG61671.1| conserved hypothetical protein [Chelativorans sp. BNC1]
Length = 161
Score = 92.8 bits (229), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%), Gaps = 8/157 (5%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M KFL + +WIS TL + + F S PP + +++ ++S+P V G
Sbjct: 1 MFKFLLAAVWISAATLAAVFYSFQASQARSNAAPPPPF-FGGLDYVRTNVMSVPVVKEGG 59
Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYL-----YTLLSGPPMGDFVQIKAFGFDNLRK 115
+ YFLV+L + V ER I TD L ++ L G P DF ++ D LR
Sbjct: 60 VGGYFLVRLVYTVE--PERLKALSIPTDVLLIDQLHSYLYGNPQIDFSAKESVDLDALRN 117
Query: 116 KIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLR 152
I++ +N+R+G Q I EVL+++++YLS D+R N +R
Sbjct: 118 GIRDSINARVGEQLIHEVLVEQVDYLSKADIRDNAIR 154
>gi|116250512|ref|YP_766350.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115255160|emb|CAK06234.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 179
Score = 92.0 bits (227), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 87/146 (59%), Gaps = 7/146 (4%)
Query: 1 MLKFLFSGIWISVVTLISFYM-LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59
M+K + +GIW+ +TL S Y ++L + A++ ++K E +++P + NG
Sbjct: 1 MIKLVLTGIWVCAITLASVYFSVYLATAPAPAATDSKQSALE---LVKGETITVPIIGNG 57
Query: 60 VLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116
+ YFL ++SF++N + L E+ TD L++LL G M D IK+F R++
Sbjct: 58 AITGYFLGRVSFMMNKDMLKGVTLPLSEMTTDELFSLLVGNKMVDIAHIKSFDPKAFREE 117
Query: 117 IKEDLNSRLGSQFISEVLIDELNYLS 142
IK+ +N RLG +++++V++++L+YLS
Sbjct: 118 IKKGMNERLGGEYVADVMLEQLDYLS 143
>gi|241203136|ref|YP_002974232.1| hypothetical protein Rleg_0382 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857026|gb|ACS54693.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 179
Score = 91.7 bits (226), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 87/146 (59%), Gaps = 7/146 (4%)
Query: 1 MLKFLFSGIWISVVTLISFYM-LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59
M+K + +G+W+ +TL S Y ++L + A++ ++K E +++P + NG
Sbjct: 1 MIKLVLTGVWVCAITLASVYFSVYLATAPAPAATDSKQSALE---LVKGETITVPIIGNG 57
Query: 60 VLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116
+ YFL ++SF++N + L E+ TD L++LL G M D IK+F R++
Sbjct: 58 AITGYFLGRVSFMMNKDMLKGVTLPLSEMTTDELFSLLVGNKMVDIAHIKSFDPKAFREE 117
Query: 117 IKEDLNSRLGSQFISEVLIDELNYLS 142
IK+ +N RLG +++++V++++L+YLS
Sbjct: 118 IKKGMNERLGGEYVADVMLEQLDYLS 143
>gi|86356342|ref|YP_468234.1| hypothetical protein RHE_CH00691 [Rhizobium etli CFN 42]
gi|86280444|gb|ABC89507.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 179
Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 91/153 (59%), Gaps = 7/153 (4%)
Query: 1 MLKFLFSGIWISVVTLISFYM-LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59
M+K + +GIW+ +TL S Y ++L + A++ ++K E +++P + +G
Sbjct: 1 MIKLVLTGIWVCAITLASVYFSVYLATAPAPAATDSKQSALE---LVKGETITVPVIGDG 57
Query: 60 VLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116
+ YFL ++SF++N + L E+ TD L++LL G M D IK+F R++
Sbjct: 58 GITGYFLGRISFMMNKDMLKGVTLPLTEMTTDELFSLLVGNKMVDLAHIKSFDPKAFREE 117
Query: 117 IKEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149
I++ +N RLG +++++V++++L+YLS +++ N
Sbjct: 118 IRKGMNERLGGEYVADVMLEQLDYLSKEEVKQN 150
>gi|222084897|ref|YP_002543426.1| hypothetical protein Arad_0927 [Agrobacterium radiobacter K84]
gi|221722345|gb|ACM25501.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 178
Score = 91.7 bits (226), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 81/147 (55%), Gaps = 9/147 (6%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN--IIKSELVSIPSVSN 58
M+K + +G+W+ VVTL S Y S+ T P K +K E +++P ++N
Sbjct: 1 MIKLVLTGLWVCVVTLASVYF----SVQTATAPATSPDDAKKAQQEFVKGEAINVPVIAN 56
Query: 59 GVLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115
G + YFL ++SF+++ + + L + TD LY+LL G D ++ F R
Sbjct: 57 GQVTGYFLTRISFMMDKGKASALQPPLAALTTDELYSLLVGNKAIDIAHVETFNVAAFRD 116
Query: 116 KIKEDLNSRLGSQFISEVLIDELNYLS 142
+IK+ +N RLG ++ +VL+++L+YLS
Sbjct: 117 EIKKSMNERLGGDYVGDVLVEQLDYLS 143
>gi|325291974|ref|YP_004277838.1| hypothetical protein AGROH133_04009 [Agrobacterium sp. H13-3]
gi|325059827|gb|ADY63518.1| hypothetical protein AGROH133_04009 [Agrobacterium sp. H13-3]
Length = 178
Score = 90.5 bits (223), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 88/151 (58%), Gaps = 6/151 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNT-NIIKSELVSIPSVSNG 59
MLK L +G+W+ VTL + Y F M T + A K + ++K E ++IP +++G
Sbjct: 1 MLKLLLTGVWVCAVTLGAVY--FSVQMATAPSSGDEAGAKKASLQLVKGESITIPVINDG 58
Query: 60 VLQAYFLVKLSFIVN-DSQERSYL--KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116
+ YFL ++S V+ D + L ++ TD L+TLL+G M + I F D +++
Sbjct: 59 GVNGYFLSRISLRVDKDKMAKIELPATQLMTDELFTLLAGSSMVNIANISTFDPDVFKQR 118
Query: 117 IKEDLNSRLGSQFISEVLIDELNYLSIVDMR 147
I+E LN +LG + + +VLI++L+YLS D+R
Sbjct: 119 IREGLNKKLGDEVVGDVLIEQLDYLSKADIR 149
>gi|150395515|ref|YP_001325982.1| hypothetical protein Smed_0288 [Sinorhizobium medicae WSM419]
gi|150027030|gb|ABR59147.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 189
Score = 88.6 bits (218), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 84/157 (53%), Gaps = 20/157 (12%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN------IIKSELVSIP 54
MLK + +G+W+ VVTL S Y +M P L+ + + E++++P
Sbjct: 1 MLKLVLTGVWVCVVTLGSVYF-------SMQHASAPVLSDAEADRRASQEYVPGEMITVP 53
Query: 55 SVSNGVLQAYFLVKLSFIVNDSQE-----RSYLKEIATDYLYTLLSGPPMGDFVQIKAFG 109
S+ +G +Q YFL KLSF + S+E + L+++ TD LY +L G D AF
Sbjct: 54 SIRDGAVQGYFLAKLSF--SASREGIAGLHAPLRQLVTDELYDMLVGSKFIDVANTAAFD 111
Query: 110 FDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDM 146
+ + ++E LN + G + ISEVL+++L YL+ D+
Sbjct: 112 LPSFKLAVREGLNKKFGGEVISEVLVEQLEYLTKDDV 148
>gi|307318941|ref|ZP_07598372.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|306895355|gb|EFN26110.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
Length = 188
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
MLK + +G+W+ VTL S Y + +V + + + E+++IPS+ +G
Sbjct: 1 MLKLVLTGVWVCAVTLGSVYFSMQHASAPVVSD-AEADRRASQEYVPGEMITIPSIKDGA 59
Query: 61 LQAYFLVKLSFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+Q YFL KLSF + ++ + L+++ TD LY +L G D F + +
Sbjct: 60 VQGYFLAKLSFSASREGIAKLHAPLRQLVTDELYDMLVGSRFIDVADTATFDLAAFKVAV 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDM 146
K+ LN +LGS+ ISEVL+++L YL+ D+
Sbjct: 120 KDGLNRKLGSEVISEVLVEQLEYLTKEDV 148
>gi|15964444|ref|NP_384797.1| hypothetical protein SMc03057 [Sinorhizobium meliloti 1021]
gi|307311586|ref|ZP_07591227.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
gi|15073621|emb|CAC45263.1| Conserved hypothetical transmembrane protein [Sinorhizobium
meliloti 1021]
gi|306899603|gb|EFN30232.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
Length = 188
Score = 88.2 bits (217), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
MLK + +G+W+ VTL S Y + +V + + + E+++IPS+ +G
Sbjct: 1 MLKLVLTGVWVCAVTLGSVYFSMQHASAPVVSD-AEADRRASQEYVPGEMITIPSIKDGA 59
Query: 61 LQAYFLVKLSFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+Q YFL KLSF + ++ + L+++ TD LY +L G D F + +
Sbjct: 60 VQGYFLAKLSFSASREGIAKLHAPLRQLVTDELYDMLVGSRFIDVADTATFDLAAFKVAV 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDM 146
K+ LN +LGS+ ISEVL+++L YL+ D+
Sbjct: 120 KDGLNRKLGSEVISEVLVEQLEYLTKEDV 148
>gi|15887931|ref|NP_353612.1| hypothetical protein Atu8132 [Agrobacterium tumefaciens str. C58]
gi|15155527|gb|AAK86397.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 177
Score = 87.4 bits (215), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 83/152 (54%), Gaps = 5/152 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
MLK L +G+W+ VTL + Y F M T + ++K E ++IP +++G
Sbjct: 1 MLKLLLTGVWVCAVTLGAVY--FSVQMATAPAPDEAGAKKADLQLVKGESITIPVINDGG 58
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL ++S V+ ++ ++ TD L+TLL+G M + I F + +++I
Sbjct: 59 VNGYFLSRISLRVDKAKMAKIELPATQLMTDELFTLLAGSSMVNIANISTFDPEAFKQRI 118
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149
+E LN RL + + +VLI++L+YLS D+R
Sbjct: 119 REGLNKRLDDEVVEDVLIEQLDYLSKADIREQ 150
>gi|222147601|ref|YP_002548558.1| hypothetical protein Avi_0778 [Agrobacterium vitis S4]
gi|221734589|gb|ACM35552.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 176
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 91/179 (50%), Gaps = 15/179 (8%)
Query: 1 MLKFLFSGIWISVVTLISFY--MLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSN 58
M+K + +G+W +V L++ Y + + + E PP T +++ E +++P + N
Sbjct: 1 MVKIVIAGVWACIVALVAVYFSIQVATAPPPVEEAKAPP-----TEVVRGEAITVPFLEN 55
Query: 59 GVLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115
G ++ YF+ + SF+V+ + + + + TD L+TLL G M D + D ++
Sbjct: 56 GKVKGYFIGRFSFMVDKEKAGAMQMPMTALMTDQLFTLLVGNSMVDLSKSTKLDVDGFKQ 115
Query: 116 KIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174
IK +N RLGS I++VLI++L++L D+R G + ++E K P
Sbjct: 116 AIKTGINKRLGSDVINDVLIEQLDFLGKDDIRE-----GGGGKPKLLPAVKIVEGEKAP 169
>gi|260466576|ref|ZP_05812764.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259029582|gb|EEW30870.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 171
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 4/155 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +WI TL + + F + + V P+ + + +K++++S+P + N
Sbjct: 1 MIKVIAIAVWICAATLGAVFYSFQAAGEKGVGETPKPM-LGGLDYVKTDIISVPLIHNAS 59
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL KL + V Q + + TD +YT L P DF + D R I
Sbjct: 60 IDGYFLTKLVYTVEPEQIKKLSIPADALITDQVYTYLYSNPQIDFTNKQTIDLDAFRAAI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLR 152
++ +N+R+G+ + EVLID++N+LS ++R N LR
Sbjct: 120 RDTINTRVGANLVHEVLIDQVNFLSKDEIRDNWLR 154
>gi|227820887|ref|YP_002824857.1| hypothetical protein NGR_c03060 [Sinorhizobium fredii NGR234]
gi|227339886|gb|ACP24104.1| hypothetical protein NGR_c03060 [Sinorhizobium fredii NGR234]
Length = 188
Score = 84.0 bits (206), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
MLK + +G+W+ VTL S Y + +V + + + E++++P + G
Sbjct: 1 MLKLVLTGVWVCAVTLGSVYFSMQYASAPIVSDAEADRR-ASEEYVPGEIITVPVIEEGA 59
Query: 61 LQAYFLVKLSFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+Q YFL KLSF ++ + L+++ TD LY +L G D F + + +
Sbjct: 60 VQGYFLAKLSFSATREGIAKLHAPLRQVVTDELYDMLVGSRFVDVADTGTFDLPSFKVAV 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMR 147
K+ LN +LG + I+EVL+++L YL DM+
Sbjct: 120 KDGLNKKLGGEVITEVLVEQLEYLGKDDMK 149
>gi|13472618|ref|NP_104185.1| hypothetical protein mlr2967 [Mesorhizobium loti MAFF303099]
gi|14023364|dbj|BAB49971.1| mlr2967 [Mesorhizobium loti MAFF303099]
Length = 178
Score = 83.2 bits (204), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 87/177 (49%), Gaps = 4/177 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +W+ TL + + F + + V P+ + + +K++++S+P + +
Sbjct: 1 MIKIIAIAVWVCAATLGAVFYSFQAAGERGVGEKPKPM-LGGLDYVKTDVISVPLIRDSK 59
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL KL + V Q + + + TD +Y+ L P DF + D R I
Sbjct: 60 IGGYFLAKLVYTVEPEQIKKLSIPAEALITDQVYSYLYANPQIDFTKKATIDLDAFRAAI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174
++ +N+R+G+ + EVL+D++N+LS ++R N LR ++ E + P
Sbjct: 120 RDTVNTRVGANLVHEVLVDQVNFLSKDEIRDNWLRRRQDSDTAAAGTAKPAEADAPP 176
>gi|319781643|ref|YP_004141119.1| hypothetical protein Mesci_1916 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167531|gb|ADV11069.1| hypothetical protein Mesci_1916 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 171
Score = 80.9 bits (198), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 81/155 (52%), Gaps = 4/155 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +WI TL + + F + + V P+ + + +K++++S+P + +
Sbjct: 1 MIKVIAIAVWICAATLGAVFYSFQAAGERGVGETPKPM-LGGLDYVKTDIISVPLIRDSE 59
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL KL + V Q + + + TD +Y+ L P DF D R I
Sbjct: 60 IGGYFLTKLVYTVEPEQIKKLSIPAEALITDQVYSYLYSNPQIDFTNKATIDLDAFRAAI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLR 152
++ +N+R+G+ + EVLID++N+LS ++R N LR
Sbjct: 120 RDTVNTRVGAPLVHEVLIDQVNFLSKDEIRDNWLR 154
>gi|23500842|ref|NP_700282.1| hypothetical protein BRA1127 [Brucella suis 1330]
gi|62317946|ref|YP_223799.1| hypothetical protein BruAb2_1064 [Brucella abortus bv. 1 str.
9-941]
gi|83269923|ref|YP_419214.1| hypothetical protein BAB2_1084 [Brucella melitensis biovar Abortus
2308]
gi|161621170|ref|YP_001595056.1| hypothetical protein BCAN_B1156 [Brucella canis ATCC 23365]
gi|163845446|ref|YP_001623101.1| hypothetical protein BSUIS_B1354 [Brucella suis ATCC 23445]
gi|225628417|ref|ZP_03786451.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237817491|ref|ZP_04596482.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254691624|ref|ZP_05154878.1| hypothetical protein Babob68_16097 [Brucella abortus bv. 6 str.
870]
gi|254695080|ref|ZP_05156908.1| hypothetical protein Babob3T_10588 [Brucella abortus bv. 3 str.
Tulya]
gi|254698177|ref|ZP_05160005.1| hypothetical protein Babob28_10820 [Brucella abortus bv. 2 str.
86/8/59]
gi|254702371|ref|ZP_05164199.1| hypothetical protein Bsuib36_00065 [Brucella suis bv. 3 str. 686]
gi|254706508|ref|ZP_05168336.1| hypothetical protein BpinM_05862 [Brucella pinnipedialis
M163/99/10]
gi|254711207|ref|ZP_05173018.1| hypothetical protein BpinB_13290 [Brucella pinnipedialis B2/94]
gi|254711808|ref|ZP_05173619.1| hypothetical protein BcetM6_00050 [Brucella ceti M644/93/1]
gi|254714876|ref|ZP_05176687.1| hypothetical protein BcetM_00050 [Brucella ceti M13/05/1]
gi|254731622|ref|ZP_05190200.1| hypothetical protein Babob42_10630 [Brucella abortus bv. 4 str.
292]
gi|256015886|ref|YP_003105895.1| hypothetical protein BMI_II1133 [Brucella microti CCM 4915]
gi|256030164|ref|ZP_05443778.1| hypothetical protein BpinM2_05870 [Brucella pinnipedialis
M292/94/1]
gi|256112188|ref|ZP_05453109.1| hypothetical protein Bmelb3E_05802 [Brucella melitensis bv. 3 str.
Ether]
gi|256158343|ref|ZP_05456247.1| hypothetical protein BcetM4_05802 [Brucella ceti M490/95/1]
gi|256252723|ref|ZP_05458259.1| hypothetical protein BcetB_00080 [Brucella ceti B1/94]
gi|256256811|ref|ZP_05462347.1| hypothetical protein Babob9C_05525 [Brucella abortus bv. 9 str.
C68]
gi|260544130|ref|ZP_05819951.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260568726|ref|ZP_05839195.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260757254|ref|ZP_05869602.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260759381|ref|ZP_05871729.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260762624|ref|ZP_05874956.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883058|ref|ZP_05894672.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261215432|ref|ZP_05929713.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261216564|ref|ZP_05930845.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261219801|ref|ZP_05934082.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261313963|ref|ZP_05953160.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261318798|ref|ZP_05957995.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261319435|ref|ZP_05958632.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261752934|ref|ZP_05996643.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265987195|ref|ZP_06099752.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265993615|ref|ZP_06106172.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|265996858|ref|ZP_06109415.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|294852956|ref|ZP_06793628.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
gi|297250162|ref|ZP_06933863.1| hypothetical protein BAYG_02950 [Brucella abortus bv. 5 str. B3196]
gi|23464505|gb|AAN34287.1| conserved hypothetical protein [Brucella suis 1330]
gi|62198139|gb|AAX76438.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82940197|emb|CAJ13250.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|161337981|gb|ABX64285.1| Hypothetical protein BCAN_B1156 [Brucella canis ATCC 23365]
gi|163676169|gb|ABY40279.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|225616263|gb|EEH13311.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237787326|gb|EEP61543.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|255998546|gb|ACU50233.1| hypothetical protein BMI_II1133 [Brucella microti CCM 4915]
gi|260097401|gb|EEW81275.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260155391|gb|EEW90472.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260669699|gb|EEX56639.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260673045|gb|EEX59866.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260677362|gb|EEX64183.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260872586|gb|EEX79655.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260917039|gb|EEX83900.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260918385|gb|EEX85038.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260921653|gb|EEX88221.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292125|gb|EEX95621.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261298021|gb|EEY01518.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261302989|gb|EEY06486.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261742687|gb|EEY30613.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262551155|gb|EEZ07316.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|262764485|gb|EEZ10517.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|264659392|gb|EEZ29653.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|294818611|gb|EFG35611.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
gi|297174031|gb|EFH33395.1| hypothetical protein BAYG_02950 [Brucella abortus bv. 5 str. B3196]
gi|326411290|gb|ADZ68354.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326554579|gb|ADZ89218.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 175
Score = 66.6 bits (161), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V L S ++ R + P + +K++++S+P +SNG
Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAAVEAGPGGFGGVDYVKTDVMSVPIISNGA 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + +L + V+ + + L+ +D ++ G D ++ F+++R I
Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLR 152
DLN+R I ++L+++ NY+S ++R+ +R
Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMR 154
>gi|306845407|ref|ZP_07477981.1| Hypothetical protein BIBO1_2095 [Brucella sp. BO1]
gi|306274150|gb|EFM55966.1| Hypothetical protein BIBO1_2095 [Brucella sp. BO1]
Length = 175
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V L S ++ R + P + +K++++S+P +SNG
Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAAVKAGPGGFGGVDYVKTDVMSVPIISNGA 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + +L + V+ + + L+ +D ++ G D ++ F+++R I
Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLR 152
DLN+R I ++L+++ NY+S ++R+ +R
Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMR 154
>gi|148557849|ref|YP_001257992.1| hypothetical protein BOV_A1031 [Brucella ovis ATCC 25840]
gi|148369134|gb|ABQ62006.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 175
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V L S ++ R + P + +K++++S+P +SNG
Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAAVEAGPDGFGGVDYVKTDVMSVPIISNGA 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + +L + V+ + + L+ +D ++ G D ++ F+++R I
Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLR 152
DLN+R I ++L+++ NY+S ++R+ +R
Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMR 154
>gi|254699252|ref|ZP_05161080.1| hypothetical protein Bsuib55_00082 [Brucella suis bv. 5 str. 513]
gi|261749690|ref|ZP_05993399.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261739443|gb|EEY27369.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
Length = 175
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 77/155 (49%), Gaps = 4/155 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V L S ++ R + P + +K++++S+P +SNG
Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAAVEAGPGGFGGVDYVKTDVMSVPIISNGA 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y +L + V+ + + L+ +D ++ G D ++ F+++R I
Sbjct: 61 VTGYVAAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLR 152
DLN+R I ++L+++ NY+S ++R+ +R
Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMR 154
>gi|17988516|ref|NP_541149.1| hypothetical protein BMEII0172 [Brucella melitensis bv. 1 str. 16M]
gi|256042853|ref|ZP_05445799.1| hypothetical protein Bmelb1R_00115 [Brucella melitensis bv. 1 str.
Rev.1]
gi|260564091|ref|ZP_05834576.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265989289|ref|ZP_06101846.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|17984309|gb|AAL53413.1| hypothetical protein BMEII0172 [Brucella melitensis bv. 1 str. 16M]
gi|260151734|gb|EEW86827.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|262999958|gb|EEZ12648.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 175
Score = 65.9 bits (159), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 78/155 (50%), Gaps = 4/155 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V L S ++ R + P + +K++++S+P +SNG
Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAVVEAGPGGFGGVDYVKTDVMSVPIISNGA 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + +L + V+ + + L+ +D ++ G D ++ F+++R I
Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLR 152
DLN+R I ++L+++ NY+S ++R+ +R
Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMR 154
>gi|153011496|ref|YP_001372710.1| hypothetical protein Oant_4181 [Ochrobactrum anthropi ATCC 49188]
gi|151563384|gb|ABS16881.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 179
Score = 65.1 bits (157), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 87/178 (48%), Gaps = 6/178 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V S ++ +++ + E + +K++++S+P +SNG
Sbjct: 1 MIRIIAIGLWICAVAFGSLFLAVRQNVSSSGEAQAATSGFGGVDYVKTDVMSVPIISNGG 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + +L + V+ + + L+ D ++ G D +++ F+++R I
Sbjct: 61 VAGYVVTQLVYTVDSNIRKKLTVPLEFFINDEIFRKFYG-SYSDTKEVEKVSFEDVRASI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEPL 175
DLN+R I ++L+++ NY+S ++R+ +R + K S + N EP+
Sbjct: 120 ITDLNARFPEPVIKDLLVEQFNYISAEEIRAMNMR--GTPTPTAPAKQSEKQANAEPV 175
>gi|256059816|ref|ZP_05450011.1| hypothetical protein Bneo5_05665 [Brucella neotomae 5K33]
gi|261323796|ref|ZP_05962993.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261299776|gb|EEY03273.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 172
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 79/164 (48%), Gaps = 9/164 (5%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V L S ++ R + P + +K++++S+P +SNG
Sbjct: 1 MIRIIVIGLWICAVALGSLFLAINRDVSASAAVEAGPGGFGGVDYVKTDVMSVPIISNGA 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + +L + V+ + + L+ +D ++ G D ++ F+++R I
Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLS-----IVDMRSNCLRLGSN 156
DLN+R I ++L ++ NY+S ++MR++ G N
Sbjct: 120 INDLNARFPEPVIKDLLAEQFNYISSEEIHTMNMRAHAQPGGRN 163
>gi|319405386|emb|CBI79005.1| conserved exported hypothetical protein [Bartonella sp. AR 15-3]
Length = 155
Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 85/153 (55%), Gaps = 8/153 (5%)
Query: 1 MLKFLFSGIWISVVTLISF-YMLFLRSMDTMVENHVPPLAIK-NTNIIKSELVSIPSVSN 58
M++ + G+WI +V L + + L + ++D P+AI+ +N +E++S+P +
Sbjct: 1 MIRMIAMGLWICLVALGALVFSLKVNAVDPNKPEETTPIAIEIGSN--NTEIMSVPIFVD 58
Query: 59 GVLQAYFLVKLSFIVNDSQERSYLKEIAT---DYLYTLLSGPPMGDFVQIKAFGFDNLRK 115
G +Q Y +V+L++IV+ + E+ + T D ++ G D +I+ F+ +++
Sbjct: 59 GNVQGYIIVQLAYIVDKTVEKEISISVGTLINDTIFQYFWGS-YSDVREIEKVKFEMIKE 117
Query: 116 KIKEDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
+I +D+N R + ++L+ + NYLS+ +RS
Sbjct: 118 RIIDDVNQRFSKAVLKDLLVKQFNYLSVDKIRS 150
>gi|225686874|ref|YP_002734846.1| hypothetical protein BMEA_B1121 [Brucella melitensis ATCC 23457]
gi|256261991|ref|ZP_05464523.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|225642979|gb|ACO02892.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|263091475|gb|EEZ16011.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
Length = 175
Score = 63.9 bits (154), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 77/155 (49%), Gaps = 4/155 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V L S ++ R + P + +K++++S+P + NG
Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAAVEAGPGGFGGVDYVKTDVMSVPIILNGA 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + +L + V+ + + L+ +D ++ G D ++ F+++R I
Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLR 152
DLN+R I ++L+++ NY+S ++R+ +R
Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMR 154
>gi|170744556|ref|YP_001773211.1| hypothetical protein M446_6520 [Methylobacterium sp. 4-46]
gi|168198830|gb|ACA20777.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
Length = 148
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61
++ + +GIWI VVTL+S Y + + P L + K +++P +++G L
Sbjct: 1 MRIVVTGIWICVVTLLSCYGVVTWGAGLFAQRTEPYL--EGLQYQKLRAINVPVIADGAL 58
Query: 62 QAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118
Q Y + L F + + D + + G P DF ++ + +I+
Sbjct: 59 QGYIVTVLVFTADAKLMHTVAVPPNSFVIDEAFRQIYGDPSLDFRRMAKYNISKRLDEIR 118
Query: 119 EDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
+N RLG++ + +VL+++ N++ D+RS
Sbjct: 119 AKVNERLGAEVVKDVLVEDFNFVPRKDLRS 148
>gi|220926493|ref|YP_002501795.1| hypothetical protein Mnod_6732 [Methylobacterium nodulans ORS 2060]
gi|219951100|gb|ACL61492.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 148
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61
++ + +GIWI +VTL+S Y + + P + K +++P +++G L
Sbjct: 1 MRVVVTGIWICIVTLLSCYGVLTWGAGLFAQKTEP--YFEGLQYQKLRAINVPIIADGAL 58
Query: 62 QAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118
Q Y + L F + + D + + G P DF ++ + + +I+
Sbjct: 59 QGYIVTTLVFTADAKLMHTLAVPPNAFVIDEAFRQIYGDPSLDFRRLAKYNINKRLTEIR 118
Query: 119 EDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
+N RLG++ + +VL+++ N++ D+RS
Sbjct: 119 AKVNERLGAEVVKDVLVEDFNFVPRKDVRS 148
>gi|328545476|ref|YP_004305585.1| hypothetical protein SL003B_3860 [polymorphum gilvum SL003B-26A1]
gi|326415218|gb|ADZ72281.1| hypothetical protein SL003B_3860 [Polymorphum gilvum SL003B-26A1]
Length = 151
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 75/156 (48%), Gaps = 12/156 (7%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K +G+W++ L S Y + VEN + + V++P + +G
Sbjct: 1 MMKLFLAGLWVTATALASSYGAVQWTTARTVENEAKA-SFGGIDYETIRPVNVPILEDGA 59
Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIAT-------DYLYTLLSGPPMGDFVQIKAFGFDNL 113
L+ Y + +L F + + LK +A D + LL +F +++ + D L
Sbjct: 60 LRGYVVAQLVF----TADADTLKALAVPPHPFIVDEAFRLLYADESLNFRRLERYDLDYL 115
Query: 114 RKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149
+ ++++ +N+R+G I E+L++E NY + D+ S+
Sbjct: 116 KTRVRDAVNARIGEAVIREILVEEFNYFAKEDVLSH 151
>gi|115523205|ref|YP_780116.1| hypothetical protein RPE_1184 [Rhodopseudomonas palustris BisA53]
gi|115517152|gb|ABJ05136.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 150
Score = 58.2 bits (139), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 75/155 (48%), Gaps = 14/155 (9%)
Query: 1 MLKFLFSGIWISVVTL-----ISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPS 55
MLK L +G+W+ +VT +S++ ++ PP + K+++ ++P
Sbjct: 1 MLKLLITGVWVCIVTAGASLGVSYWN------ESRAALPPPPDYAEGLVYEKTKVFNVPM 54
Query: 56 VSNGVLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDN 112
+++G +Q Y + +L F + R + D + + G P DF ++ + +
Sbjct: 55 IADGGVQGYIVAQLVFTADAKVLRQLPVPAESFVVDEAFRSIYGDPKLDFKKLARYDLNQ 114
Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMR 147
L + +KE +N RL + + +VL+ + NY+S +R
Sbjct: 115 LTQSVKERVNKRLQADVLRDVLVQDFNYVSKDQIR 149
>gi|90418353|ref|ZP_01226265.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90338025|gb|EAS51676.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 153
Score = 57.8 bits (138), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 75/153 (49%), Gaps = 7/153 (4%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K L G+W+ VTL S Y++ S+++ P + + K+E ++IP + +
Sbjct: 1 MIKLLAVGLWVCAVTLGSSYVM--ASINSAPSEEAEPNYFEGLDYRKTENITIPMIKDSA 58
Query: 61 LQAYFLVKLSFIVNDSQERSYLK----EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116
++ Y L + + + D + + LK D + L DF + F +L
Sbjct: 59 IRGYILARFVYTI-DGKTVAQLKVPPDPFILDEAFRRLYTTDGFDFDEPTRFDLSSLTDG 117
Query: 117 IKEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149
I++ +N+R + + E+L+D+ +Y++ D+R+
Sbjct: 118 IRDAVNARYSEELVKEILVDQFDYIAKDDIRNG 150
>gi|239834415|ref|ZP_04682743.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239822478|gb|EEQ94047.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 180
Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 77/155 (49%), Gaps = 4/155 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V S + ++ + + +K++++S+P +SNG
Sbjct: 1 MIRIIAIGLWICAVAFGSLFFAVRQNASSPDGAQAAVGGFGGVDYVKTDVMSVPILSNGG 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + +L + ++ + + L+ +D ++ G D +++ F+++R I
Sbjct: 61 VAGYVVTQLVYTIDSNVRKKLSVPLEFFISDEIFRKFYGS-YSDTKEVEKVSFEDVRASI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLR 152
DLN+R I ++L+++ NY+S ++R+ +R
Sbjct: 120 IADLNARFPEPVIKDLLVEQFNYISAEEIRAMNMR 154
>gi|254502808|ref|ZP_05114959.1| hypothetical protein SADFL11_2847 [Labrenzia alexandrii DFL-11]
gi|222438879|gb|EEE45558.1| hypothetical protein SADFL11_2847 [Labrenzia alexandrii DFL-11]
Length = 152
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 70/154 (45%), Gaps = 7/154 (4%)
Query: 1 MLKFLFSGIWISVVTLISFY--MLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSN 58
M+K L +G+W+S+ LIS Y F+ + + N+ A + + V++P +
Sbjct: 1 MIKMLVAGVWMSIAMLISGYGTAKFISAQNQT--NNQEETAYVGLDYETLKPVNVPILFE 58
Query: 59 GVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115
G LQ Y + KL F + R D + L DF ++ + D L +
Sbjct: 59 GALQGYVVAKLVFTADGDTLRKLPVPPHPFLVDEAFRALYADETLDFRNLERYDLDGLTE 118
Query: 116 KIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149
+K N R+G + + +VL++E NY D+ S+
Sbjct: 119 HLKTVTNKRIGQKVVQDVLVEEFNYFDKADVLSH 152
>gi|319403945|emb|CBI77533.1| conserved exported hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 155
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 82/153 (53%), Gaps = 8/153 (5%)
Query: 1 MLKFLFSGIWISVVTLISFYM-LFLRSMDTMVENHVPPLAIK-NTNIIKSELVSIPSVSN 58
M++ + G+W+ +V L + + L + ++D P+A++ +N +E++S+P + +
Sbjct: 1 MIRMIAMGLWVCLVALGALVLSLRVNAVDPNTSEKSAPVAVEIGSN--NTEVMSVPILVD 58
Query: 59 GVLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115
G +Q Y + + +++V+ + E+ + + D ++ G D I+ F+ +++
Sbjct: 59 GDVQGYIIAQFAYVVDKTAEKEISIPVGVLINDTIFQYFWGS-YSDVRAIEKVKFEMIKE 117
Query: 116 KIKEDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
+I +D+N R + ++L+ + NYLS+ +R
Sbjct: 118 RIIDDVNKRFSKAVLKDLLVKQFNYLSVDQIRG 150
>gi|319406962|emb|CBI80599.1| conserved exported hypothetical protein [Bartonella sp. 1-1C]
Length = 155
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 82/152 (53%), Gaps = 8/152 (5%)
Query: 1 MLKFLFSGIWISVVTLISF-YMLFLRSMDTMVENHVPPLAIK-NTNIIKSELVSIPSVSN 58
M++ + G+W+ +V L + + L + ++D P+A++ +N +E++SIP + +
Sbjct: 1 MIRMVAMGLWVCLVALGALVFSLRVNAVDPNTSEKSAPIAVEIGSN--NTEVMSIPILVD 58
Query: 59 GVLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115
G +Q Y + + +++V+ E+ ++ + D ++ G D I+ F+ +++
Sbjct: 59 GDVQGYIIAQFAYVVDKIAEKEISIPVEVLINDTIFQYFWGS-YSDVRAIEKVKFEMIKE 117
Query: 116 KIKEDLNSRLGSQFISEVLIDELNYLSIVDMR 147
+I +D+N R + ++L+ + NYLS+ +R
Sbjct: 118 RIIDDVNQRFSKAVLKDLLVKQFNYLSVDQIR 149
>gi|188579937|ref|YP_001923382.1| hypothetical protein Mpop_0669 [Methylobacterium populi BJ001]
gi|179343435|gb|ACB78847.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 148
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 7/151 (4%)
Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61
++ L SG+WI VT+ S Y ++ P L + K ++IP V++G +
Sbjct: 1 MRVLLSGLWICAVTIASCYAAVTFGGGFFSKSTEPYL--EGLQYQKLAPINIPMVADGKV 58
Query: 62 QAYFLVKLSFIVNDSQERSYL----KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
Q Y + L F D++ L D + + G DF ++ + + +I
Sbjct: 59 QGYVIAVLVFTA-DAKLMHTLPVAPNAFVVDEAFRQIYGDTTIDFRKLARYDINGRLAQI 117
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
+ +N RLGS + +VL+DELN+++ ++RS
Sbjct: 118 RARVNERLGSDVVKDVLVDELNFVAKREVRS 148
>gi|240137269|ref|YP_002961738.1| hypothetical protein MexAM1_META1p0520 [Methylobacterium extorquens
AM1]
gi|240007235|gb|ACS38461.1| conserved hypothetical protein; putative membrane or exported
protein [Methylobacterium extorquens AM1]
Length = 148
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 7/151 (4%)
Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61
++ L SG+WI VT+ S Y ++ P L + K ++IP V+ G +
Sbjct: 1 MRILVSGLWICAVTIASCYAAVTFGGGFFSKSTEPYL--EGLQYQKLAPINIPMVAEGKV 58
Query: 62 QAYFLVKLSFIVNDSQERSYL----KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
Q Y + L F D++ L D + + G DF ++ + + +I
Sbjct: 59 QGYVIAVLVFTA-DAKLMHTLPVAPNAFVVDEAFRQIYGDTTIDFRKLARYDINGRLAQI 117
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
+ +N RLGS + +VL+DELN+++ ++RS
Sbjct: 118 RAKVNERLGSDVVKDVLVDELNFVAKREVRS 148
>gi|218528739|ref|YP_002419555.1| hypothetical protein Mchl_0706 [Methylobacterium chloromethanicum
CM4]
gi|254559280|ref|YP_003066375.1| hypothetical protein METDI0676 [Methylobacterium extorquens DM4]
gi|218521042|gb|ACK81627.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
gi|254266558|emb|CAX22322.1| conserved hypothetical protein; putative membrane or exported
protein [Methylobacterium extorquens DM4]
Length = 148
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 7/151 (4%)
Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61
++ L SG+WI VT+ S Y ++ P L + K ++IP V+ G +
Sbjct: 1 MRVLVSGLWICAVTIASCYAAVTFGGGFFSKSTEPYL--EGLQYQKLAPINIPMVAEGKV 58
Query: 62 QAYFLVKLSFIVNDSQERSYL----KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
Q Y + L F D++ L D + + G DF ++ + + +I
Sbjct: 59 QGYVIAVLVFTA-DAKLMHTLPVAPNAFVVDEAFRQIYGDTTIDFRKLARYDINGRLAQI 117
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
+ +N RLGS + +VL+DELN+++ ++RS
Sbjct: 118 RAKVNERLGSDVVKDVLVDELNFVAKREVRS 148
>gi|163850135|ref|YP_001638178.1| hypothetical protein Mext_0695 [Methylobacterium extorquens PA1]
gi|163661740|gb|ABY29107.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
Length = 148
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 7/151 (4%)
Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61
++ L SG+WI VT+ S Y ++ P L + K ++IP V+ G +
Sbjct: 1 MRVLVSGLWICAVTIASCYAAVTFGGGFFSKSTEPYL--EGLQYQKLAPINIPMVAEGKV 58
Query: 62 QAYFLVKLSFIVNDSQERSYL----KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
Q Y + L F D++ L D + + G DF ++ + + +I
Sbjct: 59 QGYVIAVLVFTA-DAKLMHTLPVAPNAFVVDEAFRQIYGDSTIDFRKLARYDINGRLAQI 117
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
+ +N RLGS + +VL+DELN+++ ++RS
Sbjct: 118 RAKVNERLGSDVVKDVLVDELNFVAKREVRS 148
>gi|319898621|ref|YP_004158714.1| hypothetical protein BARCL_0449 [Bartonella clarridgeiae 73]
gi|319402585|emb|CBI76130.1| conserved exported protein of unknown function [Bartonella
clarridgeiae 73]
Length = 152
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 78/146 (53%), Gaps = 8/146 (5%)
Query: 8 GIWISVVTLISF-YMLFLRSMDTMVENHVPPLAIK-NTNIIKSELVSIPSVSNGVLQAYF 65
G+W+ +V L + + L + ++D P+ ++ +N +E++S+P + +G +Q Y
Sbjct: 5 GLWVCLVALGALVFGLRMSAVDPNSSEETAPIPVEVGSN--NTEIMSVPVLVDGDVQGYV 62
Query: 66 LVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN 122
+V+L+++V+ + E+ + + D ++ G D I+ F ++K+I +D+N
Sbjct: 63 IVQLTYVVDKTIEKEISIPVGVLINDIIFQYFWGS-YSDVRAIEKVKFQMIKKRIIDDVN 121
Query: 123 SRLGSQFISEVLIDELNYLSIVDMRS 148
R + ++L+ + NYLS+ +R
Sbjct: 122 QRFSKVVLKDLLVKQFNYLSVDKIRG 147
>gi|182680484|ref|YP_001834630.1| hypothetical protein Bind_3585 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636367|gb|ACB97141.1| conserved hypothetical protein [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 149
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 76/151 (50%), Gaps = 19/151 (12%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSEL---VSIPSVS 57
ML+ IWI +VT ++FY+ S+ + P + + I+S+ +++P +
Sbjct: 1 MLRLFLCCIWICIVTSVAFYVGSTWSLSRALH----PQTQEMSGHIESKTTANINVPMIQ 56
Query: 58 NGVLQAYFLVKLSFIVNDSQERSYLKEIAT-------DYLYTLLSGPPMGDFVQIKAFGF 110
+G L Y + +FI N Q S +K++ D + +L + DF ++ +
Sbjct: 57 SGELVGYIVT--NFIYNIDQ--SDMKKLNISPEVFILDEAFHILFSQDI-DFNHLEKYQI 111
Query: 111 DNLRKKIKEDLNSRLGSQFISEVLIDELNYL 141
L+++IKE +N RLG FI ++LI E NY+
Sbjct: 112 SALKERIKERVNQRLGGDFIKDILIKEFNYI 142
>gi|158422283|ref|YP_001523575.1| hypothetical protein AZC_0659 [Azorhizobium caulinodans ORS 571]
gi|158329172|dbj|BAF86657.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 171
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 78/159 (49%), Gaps = 20/159 (12%)
Query: 1 MLKFLFSGIWISVVTLIS----FYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSV 56
M+KF+ G+W+ VTL S Y ++ + ++P L K + +++P +
Sbjct: 1 MIKFVVIGVWVCAVTLASSYGAAYWAAGANLGKAEDPYLPGLEYK-----RVPTITVPMI 55
Query: 57 SNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYL-------YTLLSGPPMGDFVQIKAFG 109
+G ++ Y + KL F + + LK+++ D + ++ + + +I +
Sbjct: 56 MDGQVKGYVIAKLVF----TADAGTLKKLSVDPVVFVVNDAFSEIYNNGRVESGKISKYN 111
Query: 110 FDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
++ ++KE +N+RL I E+LID +NY+ D+R+
Sbjct: 112 LKDMTDRVKEKVNARLNGPVIQEILIDGINYVDKNDIRT 150
>gi|254473462|ref|ZP_05086859.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211957578|gb|EEA92781.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 162
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/165 (21%), Positives = 77/165 (46%), Gaps = 14/165 (8%)
Query: 2 LKFLFSGIWISVVTLISFYM--LFLRSMDTMVEN--HVPPLAIKNTNIIKSELVSIPSVS 57
+K L +G+WI +VT+++ Y L+ D M++ H+ L ++T I ++P +
Sbjct: 1 MKVLVTGVWICLVTVVAAYFTALYKTDFDPMLQKNAHLEGLDYQSTPTI-----NVPVLE 55
Query: 58 NGVLQAYFLVKLSFIVNDSQERSYL----KEIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113
+G + Y + + F V DS+ + L D + L+ +F Q+K L
Sbjct: 56 DGKIHGYIVAQFVFTV-DSELLAKLAVPPHAFIVDEAFRLIYSKADKEFAQLKKSDLKQL 114
Query: 114 RKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNAS 158
+++++ +N R + + +VLI + + +R N + + +
Sbjct: 115 TEEVRDRVNERFATDIVQDVLIQDFTFHVPASLRDNIMENAAQQA 159
>gi|121602859|ref|YP_989414.1| hypothetical protein BARBAKC583_1155 [Bartonella bacilliformis
KC583]
gi|120615036|gb|ABM45637.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 156
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 83/160 (51%), Gaps = 10/160 (6%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKS---ELVSIPSVS 57
M+K + G+W+ +V+L + ML + S + ++P + I S E+++IP +
Sbjct: 1 MIKMIALGLWVCLVSLGAL-MLGINSYKR--DPNIPTTPVSTGEEIGSSDTEIMNIPILV 57
Query: 58 NGVLQAYFLVKLSFIVNDSQERSYLKEIAT---DYLYTLLSGPPMGDFVQIKAFGFDNLR 114
+G +Q Y + +L+++V+ ++ + ++ D ++ G + I+ FD ++
Sbjct: 58 DGSVQGYLIAQLTYVVDKKAAQNIVVPVSVLIHDAIFQNFWGS-YSNVRMIERVKFDMVK 116
Query: 115 KKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLG 154
++I + +N R + + ++L+ + NY+S+ +R R G
Sbjct: 117 QQIMDQVNQRFSNPILKDLLVKQFNYISVEKIRGATRRSG 156
>gi|170748113|ref|YP_001754373.1| hypothetical protein Mrad2831_1695 [Methylobacterium radiotolerans
JCM 2831]
gi|170654635|gb|ACB23690.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 149
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 74/158 (46%), Gaps = 19/158 (12%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMD---TMVENHVPPLAIKNTNIIKSELVSIPSVS 57
M + +F+G+WI +T++S + + D E ++ L + K ++IP ++
Sbjct: 1 MTRIVFTGLWICAITVLSSFAVIAWMPDLPKPKAEEYLEGLTYQ-----KLRPLNIPIIA 55
Query: 58 NGVLQAYFLVKLSFIVNDSQERSYLKEIAT-------DYLYTLLSGPPMGDFVQIKAFGF 110
+G +Q Y L + F + E +K D + + DF +K +
Sbjct: 56 DGAVQGYILATIIF----TAEAQLIKGAGVTPAPFVMDESFRQIYEDKDLDFRNLKKYNI 111
Query: 111 DNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
D +IK +N RLGS+ + +V+++ N+++ D+RS
Sbjct: 112 DKRLDEIKRRVNERLGSEVVKDVMVENFNFVTKKDIRS 149
>gi|118589954|ref|ZP_01547358.1| hypothetical protein SIAM614_14855 [Stappia aggregata IAM 12614]
gi|118437451|gb|EAV44088.1| hypothetical protein SIAM614_14855 [Stappia aggregata IAM 12614]
Length = 151
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 8/151 (5%)
Query: 1 MLKFLFSGIWISVVTLISFY--MLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSN 58
M+K L +G+W+S L S Y +L + + ++ P + + V++P +
Sbjct: 1 MIKILVAGLWMSATMLASGYGTTQYLAAQKRVGDDE-PAFVGLDYETVNP--VNVPILFE 57
Query: 59 GVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115
G LQ Y ++K+ F + R D + +L DF ++ + + +
Sbjct: 58 GTLQGYVVIKMVFTADGDTLRRLPVPPHPFLVDEAFRVLYSDETLDFRSLERYDLEAFTE 117
Query: 116 KIKEDLNSRLGSQFISEVLIDELNYLSIVDM 146
++K+ N+RLG + +VL++E NY D+
Sbjct: 118 RLKKSTNARLGRSVVHDVLVEEFNYFDKADV 148
>gi|90422636|ref|YP_531006.1| hypothetical protein RPC_1123 [Rhodopseudomonas palustris BisB18]
gi|90104650|gb|ABD86687.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 152
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 66/147 (44%), Gaps = 8/147 (5%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPL--AIKNTNIIKSELVSIPSVSN 58
M++ L +G W +VT+ + + D + PP A+ K++++++P ++
Sbjct: 3 MIRLLIAGAWACLVTVGASMAMSYWKQDRIAP---PPAEEALGGLVYEKTKVINVPMIAE 59
Query: 59 GVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115
G +Q Y + +L F R + D + + G DF + F +
Sbjct: 60 GSVQGYIVTQLVFTAEARALRQLPVPPEAFVVDEAFRSIYGDQKLDFKNLSRFDLSQFTQ 119
Query: 116 KIKEDLNSRLGSQFISEVLIDELNYLS 142
++E +N RL + + +VL+ + NY+S
Sbjct: 120 TVREHVNERLQTDAVRDVLVQDFNYVS 146
>gi|296445184|ref|ZP_06887144.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
gi|296257358|gb|EFH04425.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
Length = 160
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 20/162 (12%)
Query: 1 MLKFLFSGIWISVVTLISFY-MLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59
ML+ L GIW VTL S Y + +S + P ++ + K + +S+P +S G
Sbjct: 1 MLRLLLIGIWTCCVTLASTYGAAYWKSHRGAPQ---PEAHVEKLEVRKVKPISVPIISEG 57
Query: 60 VLQAYFLVKLSFIVNDSQERSYLKEIAT---------------DYLYTLLSGPPMGDFVQ 104
L+ Y + S++V + E+S+ D + L DF
Sbjct: 58 QLKGYISAEFSYVVV-APEKSHGGGHGEAAAGDGALDADSYVMDEAFRRLYADSNLDFRH 116
Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDM 146
I+ F + ++ + +N RLGS + E L+ ++ D+
Sbjct: 117 IEKFDLNAFTHEVTQRVNDRLGSGLVRETLVKSFAFVPKDDI 158
>gi|323136989|ref|ZP_08072069.1| flagellar basal body-associated protein FliL [Methylocystis sp.
ATCC 49242]
gi|322397750|gb|EFY00272.1| flagellar basal body-associated protein FliL [Methylocystis sp.
ATCC 49242]
Length = 149
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/151 (21%), Positives = 68/151 (45%), Gaps = 9/151 (5%)
Query: 1 MLKFLFSGIWISVVTLISFYM-LFLRSMDTMVENHVPPLA-IKNTNIIKSELVSIPSVSN 58
M + LF G+W V TL + Y + R M +N P + ++ K + +++P +++
Sbjct: 1 MFRTLFIGLWACVATLGATYGGAYWR----MHQNTAPAAEHAEKLDVRKLKPITVPVIAD 56
Query: 59 GVLQAYFLVKLSFIVNDSQERSYLKEIAT---DYLYTLLSGPPMGDFVQIKAFGFDNLRK 115
GVL+ Y + S + + + + + + D + ++ DF I+ L
Sbjct: 57 GVLRGYVSAEFSMVGPQADKHEHTLDPESFFLDEAFRVIYSESKIDFSDIQKADLSTLTS 116
Query: 116 KIKEDLNSRLGSQFISEVLIDELNYLSIVDM 146
+I ++N R+G + E L+ ++ DM
Sbjct: 117 QITANVNQRMGKNVVKETLVRNFTFVPREDM 147
>gi|217976252|ref|YP_002360399.1| hypothetical protein Msil_0054 [Methylocella silvestris BL2]
gi|217501628|gb|ACK49037.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length = 149
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/153 (21%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ S WI VTL + Y L T ++ P + + + K+E +S+P +++G
Sbjct: 1 MIRIAASCAWILTVTLTATY-LGATWKSTAEQSTDSPHSPERLDRKKTEPISVPVIADGN 59
Query: 61 LQAYFLVKLSFIVND-------SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113
+ Y + + ++++ + +++ + A LY DF ++ + L
Sbjct: 60 VAGYVVAQFIYLIDPEALNRLAAAPDAFITDEAFRKLYV-----EKIDFAHLEKYDLPAL 114
Query: 114 RKKIKEDLNSRLGSQFISEVLIDELNYLSIVDM 146
+ + +N RLG+ I ++L+D+ N++S D+
Sbjct: 115 TRFLTTQVNRRLGADIIKDILVDQFNFVSKSDI 147
>gi|300024566|ref|YP_003757177.1| hypothetical protein Hden_3061 [Hyphomicrobium denitrificans ATCC
51888]
gi|299526387|gb|ADJ24856.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 155
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 53/124 (42%), Gaps = 10/124 (8%)
Query: 32 ENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDS--QERSYLKE-IATD 88
ENH I+K+ +VS+P +S+G + Y + +L F + +E S E D
Sbjct: 37 ENH-------KLQILKTPMVSVPILSDGQVLGYVVTRLQFTADSDLLKESSVQPEAFVAD 89
Query: 89 YLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
+ L+ D + L + I N RLG + +V+ID YLS DM
Sbjct: 90 EAFRLIYETAPKDLKVGRKNAIKELSENIASGTNERLGRNVVKDVMIDSWTYLSKQDMMK 149
Query: 149 NCLR 152
N R
Sbjct: 150 NHER 153
>gi|114705546|ref|ZP_01438449.1| hypothetical protein FP2506_13809 [Fulvimarina pelagi HTCC2506]
gi|114538392|gb|EAU41513.1| hypothetical protein FP2506_13809 [Fulvimarina pelagi HTCC2506]
Length = 154
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 10/155 (6%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFL---RSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS 57
M+K + GIW +VV L S Y +S + E A + ++ +++P ++
Sbjct: 1 MIKLIIVGIWATVVALGSSYAAITFTDKSGEAAGEKQSDYYA--GLDYRSTDAITVPMIA 58
Query: 58 NGVLQAYFLVKLSFIVNDSQERSYL----KEIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113
+ +Q Y + + + + D Q + L + D + L DF + L
Sbjct: 59 DKRIQGYIIARFVYTI-DGQIAAKLAVPPEPFVLDEAFRRLYASEDFDFANPSRYDLPGL 117
Query: 114 RKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
+ IK +N+R G + + EVLI++ +Y+ +RS
Sbjct: 118 MEAIKTSVNARYGDELVHEVLIEQFDYVPKDTVRS 152
>gi|218681908|ref|ZP_03529587.1| hypothetical protein RetlC8_24020 [Rhizobium etli CIAT 894]
Length = 79
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 34/50 (68%)
Query: 101 DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNC 150
D IK+F R +IK+ +N RLG +++++V++++L+YLS D++ +
Sbjct: 2 DIAHIKSFDPKAFRDEIKKGMNERLGGEYVADVMLEQLDYLSKEDVKESS 51
>gi|27381958|ref|NP_773487.1| hypothetical protein bll6847 [Bradyrhizobium japonicum USDA 110]
gi|27355128|dbj|BAC52112.1| bll6847 [Bradyrhizobium japonicum USDA 110]
Length = 152
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/146 (19%), Positives = 67/146 (45%), Gaps = 6/146 (4%)
Query: 1 MLKFLFSGIWISVVTL-ISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59
M++ + +G+W+ ++T S+ + + + +++ + K+ +S+P V NG
Sbjct: 1 MIRLVLAGLWVCILTAGTSYAVAYWKENGSLLP--AKDAYLDGLQYQKTRALSVPMVENG 58
Query: 60 VLQAYFLVKLSFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116
+Q Y + + + V Q + D + + DF ++ + L
Sbjct: 59 NVQGYIVARFVYTVEARTMHQLNVPPEPFVVDEAFRRIYADDRLDFRKLARYDLSILTTG 118
Query: 117 IKEDLNSRLGSQFISEVLIDELNYLS 142
IK+ +N R+ + + +VL+++ NY+S
Sbjct: 119 IKQRVNERMQADVVQDVLVEDFNYVS 144
>gi|218463243|ref|ZP_03503334.1| hypothetical protein RetlK5_29134 [Rhizobium etli Kim 5]
Length = 76
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +GIW+ +TL S Y F M T ++K E +++P + +G
Sbjct: 1 MIKLVLTGIWVCAITLASVY--FSVYMATAPAPAATDTKQSALELVKGETITVPVIGDGA 58
Query: 61 LQAYFLVKLSFIVN 74
+ YFL ++SF++N
Sbjct: 59 ITGYFLGRVSFMMN 72
>gi|319409201|emb|CBI82845.1| conserved exported hypothetical protein [Bartonella schoenbuchensis
R1]
Length = 152
Score = 42.7 bits (99), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/109 (21%), Positives = 57/109 (52%), Gaps = 7/109 (6%)
Query: 47 KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFV 103
++E++S+P + GV+Q Y + +L+++++ E+ L + D ++ D
Sbjct: 44 QTEVISVPILVEGVVQGYIISQLTYLIDKKVEKDVSLPLSVLINDAIFKCFWD-SYSDVR 102
Query: 104 QIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYL---SIVDMRSN 149
++ F+ ++K+I +++N + + ++L+ + NYL I DM+
Sbjct: 103 AVEKIKFETVKKQIIDEVNQHFPTPVVKDLLVKQFNYLPADQIRDMKHT 151
>gi|312115268|ref|YP_004012864.1| hypothetical protein Rvan_2550 [Rhodomicrobium vannielii ATCC
17100]
gi|311220397|gb|ADP71765.1| hypothetical protein Rvan_2550 [Rhodomicrobium vannielii ATCC
17100]
Length = 151
Score = 39.3 bits (90), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M + L + I+ VTL + + + + + + P + IK + ++IP + G
Sbjct: 1 MFRDLATAALIAAVTLGAVFAGGIAANRAI--SSPPAEQVAEEIPIKLKQLTIPVIETGG 58
Query: 61 LQAYFLVKLSFIVN---DSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK-- 115
+Q Y L+++S + N +Y++ TD L + D + + D+L K
Sbjct: 59 VQGYVLLQMSVVANVKSGGHTSNYIELAVTDEALKALF---LKDRLALSKLTKDSLPKIT 115
Query: 116 -KIKEDLNSRLGSQFISEVLIDELNYLS 142
I+++ NS+LG I EV I L++L
Sbjct: 116 DDIRKNANSKLGGDTIKEVFISSLHFLG 143
>gi|149196644|ref|ZP_01873698.1| transcriptional regulator [Lentisphaera araneosa HTCC2155]
gi|149140324|gb|EDM28723.1| transcriptional regulator [Lentisphaera araneosa HTCC2155]
Length = 267
Score = 37.0 bits (84), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 71 FIVNDSQERSYLKEIATDYLYTLLS-GPPMGDFVQIKAFGFDNLRKKIKEDLNS 123
F QE + + A DYL + DF Q++A G+++LRKK KE++N
Sbjct: 157 FFAQSIQESPSVVQEACDYLRNNFHVSDKIQDFCQLRAVGYESLRKKFKEEMNC 210
>gi|161486837|ref|NP_782944.2| chaperonin GroEL [Clostridium tetani E88]
Length = 541
Score = 36.2 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 83 KEIATDYLYTLLSGPPMGDF--VQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNY 140
++I + L TL+ G F V +KA GF + RK++ ED+ + G Q ISE + +L
Sbjct: 250 EDIEGEALATLVVNKLRGTFTCVAVKAPGFGDRRKEMLEDIATLTGGQVISEEIGRDLKD 309
Query: 141 LSIVDM--RSNCLRLGSNASDLMTQKGS 166
++ VDM R+ +++ + ++ KG+
Sbjct: 310 VT-VDMLGRAESVKITKETTTIVNGKGN 336
>gi|41016885|sp|Q891G4|CH60_CLOTE RecName: Full=60 kDa chaperonin; AltName: Full=GroEL protein;
AltName: Full=Protein Cpn60
gi|28204443|gb|AAO36881.1| 60 kDa chaperonin groEL [Clostridium tetani E88]
Length = 543
Score = 36.2 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 27/88 (30%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 83 KEIATDYLYTLLSGPPMGDF--VQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNY 140
++I + L TL+ G F V +KA GF + RK++ ED+ + G Q ISE + +L
Sbjct: 252 EDIEGEALATLVVNKLRGTFTCVAVKAPGFGDRRKEMLEDIATLTGGQVISEEIGRDLKD 311
Query: 141 LSIVDM--RSNCLRLGSNASDLMTQKGS 166
++ VDM R+ +++ + ++ KG+
Sbjct: 312 VT-VDMLGRAESVKITKETTTIVNGKGN 338
>gi|269469255|gb|EEZ80778.1| hypothetical protein Sup05_0183 [uncultured SUP05 cluster
bacterium]
Length = 282
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 65/135 (48%), Gaps = 27/135 (20%)
Query: 12 SVVTLI-SFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLV--K 68
V T++ Y L++ T + N+ P IKN II ++L IPS +Q F V +
Sbjct: 40 QVATIVMGHYANLLKNQSTHLGNY--PKNIKNIQIIDAKLKGIPSQPKQQIQTEFTVTIQ 97
Query: 69 LSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSR-LGS 127
L+++ N + + ++E +++ L P+ VQ +++ LNSR +GS
Sbjct: 98 LNYLENHTIKTQQIQEA---FIFNLNKDNPLVQIVQ------------LQQALNSRIIGS 142
Query: 128 QFISEVLIDELNYLS 142
+F D L+YL+
Sbjct: 143 EF------DALHYLN 151
>gi|254720784|ref|ZP_05182595.1| hypothetical protein Bru83_15047 [Brucella sp. 83/13]
Length = 117
Score = 35.4 bits (80), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 32/56 (57%)
Query: 100 GDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGS 155
D ++ F+++R I DLN+R I ++L+++ NY+S ++R+ +R +
Sbjct: 37 SDTKSVEKVSFEDVRSSIINDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHA 92
>gi|261756161|ref|ZP_05999870.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
gi|261736145|gb|EEY24141.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
Length = 107
Score = 35.4 bits (80), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/56 (26%), Positives = 32/56 (57%)
Query: 100 GDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGS 155
D ++ F+++R I DLN+R I ++L+++ NY+S ++R+ +R +
Sbjct: 34 SDTKSVEKVSFEDVRSSIINDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHA 89
>gi|306840125|ref|ZP_07472910.1| Hypothetical protein BROD_2998 [Brucella sp. NF 2653]
gi|306404770|gb|EFM61064.1| Hypothetical protein BROD_2998 [Brucella sp. NF 2653]
Length = 100
Score = 35.0 bits (79), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 101 DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLR 152
D ++ F+++R I DLN+R I ++L+++ NY+S ++R+ +R
Sbjct: 21 DTKSVEKVSFEDVRSSIINDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMR 72
>gi|189023197|ref|YP_001932938.1| hypothetical protein BAbS19_II10090 [Brucella abortus S19]
gi|189021771|gb|ACD74492.1| hypothetical protein BAbS19_II10090 [Brucella abortus S19]
Length = 93
Score = 35.0 bits (79), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 101 DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLR 152
D ++ F+++R I DLN+R I ++L+++ NY+S ++R+ +R
Sbjct: 21 DTKSVEKVSFEDVRSSIINDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMR 72
>gi|308274743|emb|CBX31342.1| Geranylgeranyl pyrophosphate synthetase, chloroplastic [uncultured
Desulfobacterium sp.]
Length = 316
Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 20/155 (12%)
Query: 10 WISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKL 69
W+ ++ LIS ++ M+E + +A +NT I+ ++L + + G L +
Sbjct: 159 WLKIINLISTAAGYM----GMIEGQMRDIASENTQILLNKLEELHILKTGALIVASVESG 214
Query: 70 SFIVNDS-----QERSYLKEIATDYLYT--LLSGPPMGD-FVQIKAFGFDNLRKKIKEDL 121
+ + N S Q + Y K+I + LL+ MGD + K G DN+RK K
Sbjct: 215 AILANASLDQIKQLKIYAKKIGLAFQIADDLLNA--MGDPTITGKPVGTDNVRK--KSTY 270
Query: 122 NSRLG---SQFISEVLIDE-LNYLSIVDMRSNCLR 152
S LG S+ ++ LI E L+ L+I D +S+ LR
Sbjct: 271 PSLLGIDESENYAKKLIKEALHALAIFDNKSDPLR 305
>gi|121535452|ref|ZP_01667262.1| chaperonin GroEL [Thermosinus carboxydivorans Nor1]
gi|121305961|gb|EAX46893.1| chaperonin GroEL [Thermosinus carboxydivorans Nor1]
Length = 541
Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Query: 63 AYFLVKLSFIVNDSQERSYLKE-IATDYLYTLLSGPPMGDF--VQIKAFGFDNLRKKIKE 119
A L L +V +E + E + + L TL+ G F V +KA GF + RK + E
Sbjct: 229 ADLLPTLEKVVQSGKELLIIAEDVEGEALATLVVNKLRGTFRAVAVKAPGFGDRRKAMLE 288
Query: 120 DLNSRLGSQFISEVLIDELNYLSIVDM-RSNCLRLGSNASDLMTQKGSLIEKNK 172
D+ G ISE L +L+ + + D+ R+ +R+ + ++ GS E K
Sbjct: 289 DIAILTGGTVISEELGRKLDSVQLSDLGRARQVRVSKEETTIVDGHGSAEEIKK 342
Searching..................................................done
Results from round 2
>gi|254780507|ref|YP_003064920.1| hypothetical protein CLIBASIA_01970 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040184|gb|ACT56980.1| hypothetical protein CLIBASIA_01970 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 176
Score = 215 bits (548), Expect = 2e-54, Method: Composition-based stats.
Identities = 176/176 (100%), Positives = 176/176 (100%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV
Sbjct: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120
LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED
Sbjct: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120
Query: 121 LNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEPLK 176
LNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEPLK
Sbjct: 121 LNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEPLK 176
>gi|13472618|ref|NP_104185.1| hypothetical protein mlr2967 [Mesorhizobium loti MAFF303099]
gi|14023364|dbj|BAB49971.1| mlr2967 [Mesorhizobium loti MAFF303099]
Length = 178
Score = 212 bits (539), Expect = 2e-53, Method: Composition-based stats.
Identities = 44/177 (24%), Positives = 87/177 (49%), Gaps = 4/177 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +W+ TL + + F + + V P+ + + +K++++S+P + +
Sbjct: 1 MIKIIAIAVWVCAATLGAVFYSFQAAGERGVGEKPKPM-LGGLDYVKTDVISVPLIRDSK 59
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL KL + V Q + + + TD +Y+ L P DF + D R I
Sbjct: 60 IGGYFLAKLVYTVEPEQIKKLSIPAEALITDQVYSYLYANPQIDFTKKATIDLDAFRAAI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174
++ +N+R+G+ + EVL+D++N+LS ++R N LR ++ E + P
Sbjct: 120 RDTVNTRVGANLVHEVLVDQVNFLSKDEIRDNWLRRRQDSDTAAAGTAKPAEADAPP 176
>gi|153011496|ref|YP_001372710.1| hypothetical protein Oant_4181 [Ochrobactrum anthropi ATCC 49188]
gi|151563384|gb|ABS16881.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 179
Score = 202 bits (513), Expect = 2e-50, Method: Composition-based stats.
Identities = 39/178 (21%), Positives = 87/178 (48%), Gaps = 6/178 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V S ++ +++ + E + +K++++S+P +SNG
Sbjct: 1 MIRIIAIGLWICAVAFGSLFLAVRQNVSSSGEAQAATSGFGGVDYVKTDVMSVPIISNGG 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + +L + V+ + + L+ D ++ G D +++ F+++R I
Sbjct: 61 VAGYVVTQLVYTVDSNIRKKLTVPLEFFINDEIFRKFYGS-YSDTKEVEKVSFEDVRASI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEPL 175
DLN+R I ++L+++ NY+S ++R+ +R + K S + N EP+
Sbjct: 120 ITDLNARFPEPVIKDLLVEQFNYISAEEIRAMNMR--GTPTPTAPAKQSEKQANAEPV 175
>gi|163758044|ref|ZP_02165132.1| hypothetical protein HPDFL43_00425 [Hoeflea phototrophica DFL-43]
gi|162284333|gb|EDQ34616.1| hypothetical protein HPDFL43_00425 [Hoeflea phototrophica DFL-43]
Length = 185
Score = 197 bits (500), Expect = 7e-49, Method: Composition-based stats.
Identities = 55/177 (31%), Positives = 94/177 (53%), Gaps = 8/177 (4%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K L +G+WISVV L S Y + +T + P I+ ++ SIP +S G
Sbjct: 1 MIKLLITGVWISVVALASVYFSVQMA-NTPEDEEPVPALFGGLETIRGDVTSIPVISGGR 59
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL +LS+ ++ S+ +K++ TD LYT L G + DF +K F + + I
Sbjct: 60 VTGYFLTRLSYTIDPSKAALMTIPVKDLVTDALYTSLVGDNLIDFPNMKRFDLEGFKAHI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174
++ +N RLG + +VL+++++YLS D+RSN +L ++G + +P
Sbjct: 120 RDSINERLGDKVFHDVLVEQIDYLSKEDIRSNM----GGGGNLNIKEGDPVGSEGKP 172
>gi|319781643|ref|YP_004141119.1| hypothetical protein Mesci_1916 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167531|gb|ADV11069.1| hypothetical protein Mesci_1916 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 171
Score = 195 bits (495), Expect = 2e-48, Method: Composition-based stats.
Identities = 45/168 (26%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +WI TL + + F + + V P+ + + +K++++S+P + +
Sbjct: 1 MIKVIAIAVWICAATLGAVFYSFQAAGERGVGETPKPM-LGGLDYVKTDIISVPLIRDSE 59
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL KL + V Q + + + TD +Y+ L P DF D R I
Sbjct: 60 IGGYFLTKLVYTVEPEQIKKLSIPAEALITDQVYSYLYSNPQIDFTNKATIDLDAFRAAI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKG 165
++ +N+R+G+ + EVLID++N+LS ++R N LR + + K
Sbjct: 120 RDTVNTRVGAPLVHEVLIDQVNFLSKDEIRDNWLRRKKSETASEMTKA 167
>gi|23500842|ref|NP_700282.1| hypothetical protein BRA1127 [Brucella suis 1330]
gi|62317946|ref|YP_223799.1| hypothetical protein BruAb2_1064 [Brucella abortus bv. 1 str.
9-941]
gi|83269923|ref|YP_419214.1| hypothetical protein BAB2_1084 [Brucella melitensis biovar Abortus
2308]
gi|161621170|ref|YP_001595056.1| hypothetical protein BCAN_B1156 [Brucella canis ATCC 23365]
gi|163845446|ref|YP_001623101.1| hypothetical protein BSUIS_B1354 [Brucella suis ATCC 23445]
gi|225628417|ref|ZP_03786451.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237817491|ref|ZP_04596482.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|254691624|ref|ZP_05154878.1| hypothetical protein Babob68_16097 [Brucella abortus bv. 6 str.
870]
gi|254695080|ref|ZP_05156908.1| hypothetical protein Babob3T_10588 [Brucella abortus bv. 3 str.
Tulya]
gi|254698177|ref|ZP_05160005.1| hypothetical protein Babob28_10820 [Brucella abortus bv. 2 str.
86/8/59]
gi|254702371|ref|ZP_05164199.1| hypothetical protein Bsuib36_00065 [Brucella suis bv. 3 str. 686]
gi|254706508|ref|ZP_05168336.1| hypothetical protein BpinM_05862 [Brucella pinnipedialis
M163/99/10]
gi|254711207|ref|ZP_05173018.1| hypothetical protein BpinB_13290 [Brucella pinnipedialis B2/94]
gi|254711808|ref|ZP_05173619.1| hypothetical protein BcetM6_00050 [Brucella ceti M644/93/1]
gi|254714876|ref|ZP_05176687.1| hypothetical protein BcetM_00050 [Brucella ceti M13/05/1]
gi|254731622|ref|ZP_05190200.1| hypothetical protein Babob42_10630 [Brucella abortus bv. 4 str.
292]
gi|256015886|ref|YP_003105895.1| hypothetical protein BMI_II1133 [Brucella microti CCM 4915]
gi|256030164|ref|ZP_05443778.1| hypothetical protein BpinM2_05870 [Brucella pinnipedialis
M292/94/1]
gi|256112188|ref|ZP_05453109.1| hypothetical protein Bmelb3E_05802 [Brucella melitensis bv. 3 str.
Ether]
gi|256158343|ref|ZP_05456247.1| hypothetical protein BcetM4_05802 [Brucella ceti M490/95/1]
gi|256252723|ref|ZP_05458259.1| hypothetical protein BcetB_00080 [Brucella ceti B1/94]
gi|256256811|ref|ZP_05462347.1| hypothetical protein Babob9C_05525 [Brucella abortus bv. 9 str.
C68]
gi|260544130|ref|ZP_05819951.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260568726|ref|ZP_05839195.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260757254|ref|ZP_05869602.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260759381|ref|ZP_05871729.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260762624|ref|ZP_05874956.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883058|ref|ZP_05894672.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261215432|ref|ZP_05929713.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|261216564|ref|ZP_05930845.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261219801|ref|ZP_05934082.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261313963|ref|ZP_05953160.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261318798|ref|ZP_05957995.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261319435|ref|ZP_05958632.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261752934|ref|ZP_05996643.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|265987195|ref|ZP_06099752.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265993615|ref|ZP_06106172.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|265996858|ref|ZP_06109415.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|294852956|ref|ZP_06793628.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
gi|297250162|ref|ZP_06933863.1| hypothetical protein BAYG_02950 [Brucella abortus bv. 5 str. B3196]
gi|23464505|gb|AAN34287.1| conserved hypothetical protein [Brucella suis 1330]
gi|62198139|gb|AAX76438.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82940197|emb|CAJ13250.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|161337981|gb|ABX64285.1| Hypothetical protein BCAN_B1156 [Brucella canis ATCC 23365]
gi|163676169|gb|ABY40279.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|225616263|gb|EEH13311.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|237787326|gb|EEP61543.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|255998546|gb|ACU50233.1| hypothetical protein BMI_II1133 [Brucella microti CCM 4915]
gi|260097401|gb|EEW81275.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260155391|gb|EEW90472.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260669699|gb|EEX56639.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260673045|gb|EEX59866.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260677362|gb|EEX64183.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260872586|gb|EEX79655.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260917039|gb|EEX83900.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|260918385|gb|EEX85038.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|260921653|gb|EEX88221.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292125|gb|EEX95621.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|261298021|gb|EEY01518.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261302989|gb|EEY06486.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261742687|gb|EEY30613.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262551155|gb|EEZ07316.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|262764485|gb|EEZ10517.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|264659392|gb|EEZ29653.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|294818611|gb|EFG35611.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026]
gi|297174031|gb|EFH33395.1| hypothetical protein BAYG_02950 [Brucella abortus bv. 5 str. B3196]
gi|326411290|gb|ADZ68354.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326554579|gb|ADZ89218.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 175
Score = 192 bits (487), Expect = 2e-47, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V L S ++ R + P + +K++++S+P +SNG
Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAAVEAGPGGFGGVDYVKTDVMSVPIISNGA 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + +L + V+ + + L+ +D ++ G D ++ F+++R I
Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYGS-YSDTKSVEKVSFEDVRSSI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKE 173
DLN+R I ++L+++ NY+S ++R+ +R + + + E
Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPGGRNRKADAEPAAQSE 175
>gi|148557849|ref|YP_001257992.1| hypothetical protein BOV_A1031 [Brucella ovis ATCC 25840]
gi|148369134|gb|ABQ62006.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
Length = 175
Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V L S ++ R + P + +K++++S+P +SNG
Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAAVEAGPDGFGGVDYVKTDVMSVPIISNGA 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + +L + V+ + + L+ +D ++ G D ++ F+++R I
Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYGS-YSDTKSVEKVSFEDVRSSI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKE 173
DLN+R I ++L+++ NY+S ++R+ +R + + + E
Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPGGRNRKADAEPAAQSE 175
>gi|306845407|ref|ZP_07477981.1| Hypothetical protein BIBO1_2095 [Brucella sp. BO1]
gi|306274150|gb|EFM55966.1| Hypothetical protein BIBO1_2095 [Brucella sp. BO1]
Length = 175
Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V L S ++ R + P + +K++++S+P +SNG
Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAAVKAGPGGFGGVDYVKTDVMSVPIISNGA 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + +L + V+ + + L+ +D ++ G D ++ F+++R I
Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYGS-YSDTKSVEKVSFEDVRSSI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKE 173
DLN+R I ++L+++ NY+S ++R+ +R + + + E
Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPGGRNRKADAEPAAQSE 175
>gi|260466576|ref|ZP_05812764.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259029582|gb|EEW30870.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 171
Score = 191 bits (486), Expect = 3e-47, Method: Composition-based stats.
Identities = 47/168 (27%), Positives = 84/168 (50%), Gaps = 4/168 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +WI TL + + F + + V P+ + + +K++++S+P + N
Sbjct: 1 MIKVIAIAVWICAATLGAVFYSFQAAGEKGVGETPKPM-LGGLDYVKTDIISVPLIHNAS 59
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL KL + V Q + + TD +YT L P DF + D R I
Sbjct: 60 IDGYFLTKLVYTVEPEQIKKLSIPADALITDQVYTYLYSNPQIDFTNKQTIDLDAFRAAI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKG 165
++ +N+R+G+ + EVLID++N+LS ++R N LR + + K
Sbjct: 120 RDTINTRVGANLVHEVLIDQVNFLSKDEIRDNWLRRKKSETASEMTKA 167
>gi|239834415|ref|ZP_04682743.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239822478|gb|EEQ94047.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 180
Score = 191 bits (485), Expect = 4e-47, Method: Composition-based stats.
Identities = 34/179 (18%), Positives = 83/179 (46%), Gaps = 7/179 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V S + ++ + + +K++++S+P +SNG
Sbjct: 1 MIRIIAIGLWICAVAFGSLFFAVRQNASSPDGAQAAVGGFGGVDYVKTDVMSVPILSNGG 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + +L + ++ + + L+ +D ++ G D +++ F+++R I
Sbjct: 61 VAGYVVTQLVYTIDSNVRKKLSVPLEFFISDEIFRKFYGS-YSDTKEVEKVSFEDVRASI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSL-IEKNKEPL 175
DLN+R I ++L+++ NY+S ++R+ +R + K + +P+
Sbjct: 120 IADLNARFPEPVIKDLLVEQFNYISAEEIRAMNMR--GAPTPTAPGKQVPEKQAAAQPV 176
>gi|225686874|ref|YP_002734846.1| hypothetical protein BMEA_B1121 [Brucella melitensis ATCC 23457]
gi|256261991|ref|ZP_05464523.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|225642979|gb|ACO02892.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|263091475|gb|EEZ16011.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
Length = 175
Score = 190 bits (484), Expect = 5e-47, Method: Composition-based stats.
Identities = 36/176 (20%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V L S ++ R + P + +K++++S+P + NG
Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAAVEAGPGGFGGVDYVKTDVMSVPIILNGA 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + +L + V+ + + L+ +D ++ G D ++ F+++R I
Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYGS-YSDTKSVEKVSFEDVRSSI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKE 173
DLN+R I ++L+++ NY+S ++R+ +R + + + E
Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPGGRNRKADAEPAAQSE 175
>gi|254699252|ref|ZP_05161080.1| hypothetical protein Bsuib55_00082 [Brucella suis bv. 5 str. 513]
gi|261749690|ref|ZP_05993399.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261739443|gb|EEY27369.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
Length = 175
Score = 190 bits (483), Expect = 6e-47, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 81/176 (46%), Gaps = 4/176 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V L S ++ R + P + +K++++S+P +SNG
Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAAVEAGPGGFGGVDYVKTDVMSVPIISNGA 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y +L + V+ + + L+ +D ++ G D ++ F+++R I
Sbjct: 61 VTGYVAAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYGS-YSDTKSVEKVSFEDVRSSI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKE 173
DLN+R I ++L+++ NY+S ++R+ +R + + + E
Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPGGRNRKADAEPAAQSE 175
>gi|17988516|ref|NP_541149.1| hypothetical protein BMEII0172 [Brucella melitensis bv. 1 str. 16M]
gi|256042853|ref|ZP_05445799.1| hypothetical protein Bmelb1R_00115 [Brucella melitensis bv. 1 str.
Rev.1]
gi|260564091|ref|ZP_05834576.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265989289|ref|ZP_06101846.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|17984309|gb|AAL53413.1| hypothetical protein BMEII0172 [Brucella melitensis bv. 1 str. 16M]
gi|260151734|gb|EEW86827.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|262999958|gb|EEZ12648.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 175
Score = 190 bits (483), Expect = 7e-47, Method: Composition-based stats.
Identities = 37/176 (21%), Positives = 82/176 (46%), Gaps = 4/176 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V L S ++ R + P + +K++++S+P +SNG
Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAVVEAGPGGFGGVDYVKTDVMSVPIISNGA 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + +L + V+ + + L+ +D ++ G D ++ F+++R I
Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYGS-YSDTKSVEKVSFEDVRSSI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKE 173
DLN+R I ++L+++ NY+S ++R+ +R + + + E
Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPGGRNRKADAEPAAQSE 175
>gi|325291974|ref|YP_004277838.1| hypothetical protein AGROH133_04009 [Agrobacterium sp. H13-3]
gi|325059827|gb|ADY63518.1| hypothetical protein AGROH133_04009 [Agrobacterium sp. H13-3]
Length = 178
Score = 187 bits (476), Expect = 4e-46, Method: Composition-based stats.
Identities = 49/177 (27%), Positives = 88/177 (49%), Gaps = 4/177 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
MLK L +G+W+ VTL + Y + + + ++K E ++IP +++G
Sbjct: 1 MLKLLLTGVWVCAVTLGAVYFSVQMATAPSSGDEA-GAKKASLQLVKGESITIPVINDGG 59
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL ++S V+ + ++ TD L+TLL+G M + I F D +++I
Sbjct: 60 VNGYFLSRISLRVDKDKMAKIELPATQLMTDELFTLLAGSSMVNIANISTFDPDVFKQRI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174
+E LN +LG + + +VLI++L+YLS D+R + L+ + K P
Sbjct: 120 REGLNKKLGDEVVGDVLIEQLDYLSKADIREQKGNGSPRSVKLVEGEKVDTGKEAAP 176
>gi|256059816|ref|ZP_05450011.1| hypothetical protein Bneo5_05665 [Brucella neotomae 5K33]
gi|261323796|ref|ZP_05962993.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261299776|gb|EEY03273.1| conserved hypothetical protein [Brucella neotomae 5K33]
Length = 172
Score = 187 bits (474), Expect = 7e-46, Method: Composition-based stats.
Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 10/177 (5%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + G+WI V L S ++ R + P + +K++++S+P +SNG
Sbjct: 1 MIRIIVIGLWICAVALGSLFLAINRDVSASAAVEAGPGGFGGVDYVKTDVMSVPIISNGA 60
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + +L + V+ + + L+ +D ++ G D ++ F+++R I
Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYGS-YSDTKSVEKVSFEDVRSSI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174
DLN+R I ++L ++ NY+S ++ + +R + G + + EP
Sbjct: 120 INDLNARFPEPVIKDLLAEQFNYISSEEIHTMNMRAHAQPG------GRNRKADAEP 170
>gi|222084897|ref|YP_002543426.1| hypothetical protein Arad_0927 [Agrobacterium radiobacter K84]
gi|221722345|gb|ACM25501.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 178
Score = 186 bits (473), Expect = 8e-46, Method: Composition-based stats.
Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 6/177 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +G+W+ VVTL S Y + A + +K E +++P ++NG
Sbjct: 1 MIKLVLTGLWVCVVTLASVYFSVQTATAPATSPDDAKKAQQ--EFVKGEAINVPVIANGQ 58
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL ++SF+++ + + L + TD LY+LL G D ++ F R +I
Sbjct: 59 VTGYFLTRISFMMDKGKASALQPPLAALTTDELYSLLVGNKAIDIAHVETFNVAAFRDEI 118
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174
K+ +N RLG ++ +VL+++L+YLS ++ + A + +G + P
Sbjct: 119 KKSMNERLGGDYVGDVLVEQLDYLSKNEIGNGEGSGKRTAKPVKIVQGDSA-SDAPP 174
>gi|110632628|ref|YP_672836.1| hypothetical protein Meso_0267 [Mesorhizobium sp. BNC1]
gi|110283612|gb|ABG61671.1| conserved hypothetical protein [Chelativorans sp. BNC1]
Length = 161
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 49/162 (30%), Positives = 83/162 (51%), Gaps = 4/162 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M KFL + +WIS TL + + F S PP + +++ ++S+P V G
Sbjct: 1 MFKFLLAAVWISAATLAAVFYSFQASQARSNAAPPPPF-FGGLDYVRTNVMSVPVVKEGG 59
Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFLV+L + V + ++ + D L++ L G P DF ++ D LR I
Sbjct: 60 VGGYFLVRLVYTVEPERLKALSIPTDVLLIDQLHSYLYGNPQIDFSAKESVDLDALRNGI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASD 159
++ +N+R+G Q I EVL+++++YLS D+R N +R
Sbjct: 120 RDSINARVGEQLIHEVLVEQVDYLSKADIRDNAIRRRIGPDS 161
>gi|220926493|ref|YP_002501795.1| hypothetical protein Mnod_6732 [Methylobacterium nodulans ORS 2060]
gi|219951100|gb|ACL61492.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 148
Score = 185 bits (470), Expect = 2e-45, Method: Composition-based stats.
Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61
++ + +GIWI +VTL+S Y + + P + K +++P +++G L
Sbjct: 1 MRVVVTGIWICIVTLLSCYGVLTWGAGLFAQKTEPY--FEGLQYQKLRAINVPIIADGAL 58
Query: 62 QAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118
Q Y + L F + + D + + G P DF ++ + + +I+
Sbjct: 59 QGYIVTTLVFTADAKLMHTLAVPPNAFVIDEAFRQIYGDPSLDFRRLAKYNINKRLTEIR 118
Query: 119 EDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
+N RLG++ + +VL+++ N++ D+RS
Sbjct: 119 AKVNERLGAEVVKDVLVEDFNFVPRKDVRS 148
>gi|15887931|ref|NP_353612.1| hypothetical protein Atu8132 [Agrobacterium tumefaciens str. C58]
gi|15155527|gb|AAK86397.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 177
Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats.
Identities = 49/162 (30%), Positives = 84/162 (51%), Gaps = 9/162 (5%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
MLK L +G+W+ VTL + Y M T + ++K E ++IP +++G
Sbjct: 1 MLKLLLTGVWVCAVTLGAVYFSVQ--MATAPAPDEAGAKKADLQLVKGESITIPVINDGG 58
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL ++S V+ ++ ++ TD L+TLL+G M + I F + +++I
Sbjct: 59 VNGYFLSRISLRVDKAKMAKIELPATQLMTDELFTLLAGSSMVNIANISTFDPEAFKQRI 118
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASD 159
+E LN RL + + +VLI++L+YLS D+R N S
Sbjct: 119 REGLNKRLDDEVVEDVLIEQLDYLSKADIREQ----KGNGSP 156
>gi|115523205|ref|YP_780116.1| hypothetical protein RPE_1184 [Rhodopseudomonas palustris BisA53]
gi|115517152|gb|ABJ05136.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 150
Score = 185 bits (469), Expect = 3e-45, Method: Composition-based stats.
Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 4/150 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
MLK L +G+W+ +VT + + + PP + K+++ ++P +++G
Sbjct: 1 MLKLLITGVWVCIVTAGASLGVSYWNESRAALP-PPPDYAEGLVYEKTKVFNVPMIADGG 59
Query: 61 LQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+Q Y + +L F + R + D + + G P DF ++ + + L + +
Sbjct: 60 VQGYIVAQLVFTADAKVLRQLPVPAESFVVDEAFRSIYGDPKLDFKKLARYDLNQLTQSV 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMR 147
KE +N RL + + +VL+ + NY+S +R
Sbjct: 120 KERVNKRLQADVLRDVLVQDFNYVSKDQIR 149
>gi|86356342|ref|YP_468234.1| hypothetical protein RHE_CH00691 [Rhizobium etli CFN 42]
gi|86280444|gb|ABC89507.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 179
Score = 183 bits (466), Expect = 6e-45, Method: Composition-based stats.
Identities = 48/173 (27%), Positives = 90/173 (52%), Gaps = 9/173 (5%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +GIW+ +TL S Y + T ++K E +++P + +G
Sbjct: 1 MIKLVLTGIWVCAITLASVYFSVY--LATAPAPAATDSKQSALELVKGETITVPVIGDGG 58
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL ++SF++N + L E+ TD L++LL G M D IK+F R++I
Sbjct: 59 ITGYFLGRISFMMNKDMLKGVTLPLTEMTTDELFSLLVGNKMVDLAHIKSFDPKAFREEI 118
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEK 170
++ +N RLG +++++V++++L+YLS +++ N L +IE
Sbjct: 119 RKGMNERLGGEYVADVMLEQLDYLSKEEVKQN---SAGQPKKLGAP-VKIIEG 167
>gi|90418353|ref|ZP_01226265.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90338025|gb|EAS51676.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 153
Score = 183 bits (465), Expect = 7e-45, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 74/152 (48%), Gaps = 5/152 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K L G+W+ VTL S Y++ S+++ P + + K+E ++IP + +
Sbjct: 1 MIKLLAVGLWVCAVTLGSSYVM--ASINSAPSEEAEPNYFEGLDYRKTENITIPMIKDSA 58
Query: 61 LQAYFLVKLSFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
++ Y L + + ++ +Q + D + L DF + F +L I
Sbjct: 59 IRGYILARFVYTIDGKTVAQLKVPPDPFILDEAFRRLYTTDGFDFDEPTRFDLSSLTDGI 118
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149
++ +N+R + + E+L+D+ +Y++ D+R+
Sbjct: 119 RDAVNARYSEELVKEILVDQFDYIAKDDIRNG 150
>gi|315122296|ref|YP_004062785.1| hypothetical protein CKC_02740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495698|gb|ADR52297.1| hypothetical protein CKC_02740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 191
Score = 183 bits (464), Expect = 9e-45, Method: Composition-based stats.
Identities = 113/172 (65%), Positives = 140/172 (81%)
Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61
++F FSGIWIS++T+ SFY+LFLRS+D +E+ P ++ ++I ELV+IPS+SNG+L
Sbjct: 17 VEFFFSGIWISIITIASFYILFLRSVDPQIESSKPLTTEQSIHMITGELVAIPSISNGIL 76
Query: 62 QAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDL 121
QAYF VKLSFIVND Q + YLKEI+TDYLYTLLSGPPMGD VQIK+FG DN RKKIKEDL
Sbjct: 77 QAYFFVKLSFIVNDRQSKYYLKEISTDYLYTLLSGPPMGDIVQIKSFGMDNFRKKIKEDL 136
Query: 122 NSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKE 173
N +LGSQFIS+VLI+ELNYLSI D+R NC L S+LM QK SL++K K+
Sbjct: 137 NLKLGSQFISDVLINELNYLSIADIRLNCFHLSDKESNLMAQKKSLLDKAKD 188
>gi|222147601|ref|YP_002548558.1| hypothetical protein Avi_0778 [Agrobacterium vitis S4]
gi|221734589|gb|ACM35552.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 176
Score = 182 bits (463), Expect = 1e-44, Method: Composition-based stats.
Identities = 46/177 (25%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +G+W +V L++ Y + T +++ E +++P + NG
Sbjct: 1 MVKIVIAGVWACIVALVAVYFSIQVATAPPPVEEAKAPP---TEVVRGEAITVPFLENGK 57
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
++ YF+ + SF+V+ + + + + TD L+TLL G M D + D ++ I
Sbjct: 58 VKGYFIGRFSFMVDKEKAGAMQMPMTALMTDQLFTLLVGNSMVDLSKSTKLDVDGFKQAI 117
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174
K +N RLGS I++VLI++L++L D+R G + ++E K P
Sbjct: 118 KTGINKRLGSDVINDVLIEQLDFLGKDDIRE-----GGGGKPKLLPAVKIVEGEKAP 169
>gi|328545476|ref|YP_004305585.1| hypothetical protein SL003B_3860 [polymorphum gilvum SL003B-26A1]
gi|326415218|gb|ADZ72281.1| hypothetical protein SL003B_3860 [Polymorphum gilvum SL003B-26A1]
Length = 151
Score = 182 bits (462), Expect = 2e-44, Method: Composition-based stats.
Identities = 34/152 (22%), Positives = 72/152 (47%), Gaps = 4/152 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K +G+W++ L S Y + VEN + + V++P + +G
Sbjct: 1 MMKLFLAGLWVTATALASSYGAVQWTTARTVENEAKA-SFGGIDYETIRPVNVPILEDGA 59
Query: 61 LQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
L+ Y + +L F + ++ D + LL +F +++ + D L+ ++
Sbjct: 60 LRGYVVAQLVFTADADTLKALAVPPHPFIVDEAFRLLYADESLNFRRLERYDLDYLKTRV 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149
++ +N+R+G I E+L++E NY + D+ S+
Sbjct: 120 RDAVNARIGEAVIREILVEEFNYFAKEDVLSH 151
>gi|170744556|ref|YP_001773211.1| hypothetical protein M446_6520 [Methylobacterium sp. 4-46]
gi|168198830|gb|ACA20777.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
Length = 148
Score = 182 bits (461), Expect = 2e-44, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 71/150 (47%), Gaps = 5/150 (3%)
Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61
++ + +GIWI VVTL+S Y + + P L + K +++P +++G L
Sbjct: 1 MRIVVTGIWICVVTLLSCYGVVTWGAGLFAQRTEPYL--EGLQYQKLRAINVPVIADGAL 58
Query: 62 QAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118
Q Y + L F + + D + + G P DF ++ + +I+
Sbjct: 59 QGYIVTVLVFTADAKLMHTVAVPPNSFVIDEAFRQIYGDPSLDFRRMAKYNISKRLDEIR 118
Query: 119 EDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
+N RLG++ + +VL+++ N++ D+RS
Sbjct: 119 AKVNERLGAEVVKDVLVEDFNFVPRKDLRS 148
>gi|90422636|ref|YP_531006.1| hypothetical protein RPC_1123 [Rhodopseudomonas palustris BisB18]
gi|90104650|gb|ABD86687.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
Length = 152
Score = 181 bits (460), Expect = 3e-44, Method: Composition-based stats.
Identities = 31/150 (20%), Positives = 66/150 (44%), Gaps = 4/150 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ L +G W +VT+ + + D + A+ K++++++P ++ G
Sbjct: 3 MIRLLIAGAWACLVTVGASMAMSYWKQDRIAPPPAEE-ALGGLVYEKTKVINVPMIAEGS 61
Query: 61 LQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+Q Y + +L F R + D + + G DF + F + +
Sbjct: 62 VQGYIVTQLVFTAEARALRQLPVPPEAFVVDEAFRSIYGDQKLDFKNLSRFDLSQFTQTV 121
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMR 147
+E +N RL + + +VL+ + NY+S +R
Sbjct: 122 REHVNERLQTDAVRDVLVQDFNYVSKDQIR 151
>gi|150395515|ref|YP_001325982.1| hypothetical protein Smed_0288 [Sinorhizobium medicae WSM419]
gi|150027030|gb|ABR59147.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 189
Score = 179 bits (455), Expect = 1e-43, Method: Composition-based stats.
Identities = 47/163 (28%), Positives = 84/163 (51%), Gaps = 5/163 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
MLK + +G+W+ VVTL S Y + ++ + + + E++++PS+ +G
Sbjct: 1 MLKLVLTGVWVCVVTLGSVYFSMQHASAPVLSD-AEADRRASQEYVPGEMITVPSIRDGA 59
Query: 61 LQAYFLVKLSFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+Q YFL KLSF + + + L+++ TD LY +L G D AF + + +
Sbjct: 60 VQGYFLAKLSFSASREGIAGLHAPLRQLVTDELYDMLVGSKFIDVANTAAFDLPSFKLAV 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDM-RSNCLRLGSNASD 159
+E LN + G + ISEVL+++L YL+ D+ R + +
Sbjct: 120 REGLNKKFGGEVISEVLVEQLEYLTKDDVERLANSQNQPHQKP 162
>gi|15964444|ref|NP_384797.1| hypothetical protein SMc03057 [Sinorhizobium meliloti 1021]
gi|307311586|ref|ZP_07591227.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
gi|15073621|emb|CAC45263.1| Conserved hypothetical transmembrane protein [Sinorhizobium
meliloti 1021]
gi|306899603|gb|EFN30232.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
Length = 188
Score = 179 bits (454), Expect = 1e-43, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
MLK + +G+W+ VTL S Y + +V + + + E+++IPS+ +G
Sbjct: 1 MLKLVLTGVWVCAVTLGSVYFSMQHASAPVVSD-AEADRRASQEYVPGEMITIPSIKDGA 59
Query: 61 LQAYFLVKLSFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+Q YFL KLSF + ++ + L+++ TD LY +L G D F + +
Sbjct: 60 VQGYFLAKLSFSASREGIAKLHAPLRQLVTDELYDMLVGSRFIDVADTATFDLAAFKVAV 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDM 146
K+ LN +LGS+ ISEVL+++L YL+ D+
Sbjct: 120 KDGLNRKLGSEVISEVLVEQLEYLTKEDV 148
>gi|190890394|ref|YP_001976936.1| hypothetical protein RHECIAT_CH0000769 [Rhizobium etli CIAT 652]
gi|218516754|ref|ZP_03513594.1| hypothetical protein Retl8_25653 [Rhizobium etli 8C-3]
gi|190695673|gb|ACE89758.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 179
Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 86/153 (56%), Gaps = 5/153 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +G+W+ +TL S Y M T ++K E +++P + +G
Sbjct: 1 MVKLVLTGVWVCAITLASVYFSVY--MATAPAPAATDSKQSALELVKGETITVPVIGDGA 58
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL ++SF++N + L E+ TD L++LL G M D IK+F R++I
Sbjct: 59 ITGYFLGRISFMMNKDMLKGVTLPLTEMTTDELFSLLVGNKMVDLAHIKSFDAKAFREEI 118
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNC 150
K+ +N RLG ++++EV++++L+YLS +++ N
Sbjct: 119 KKGMNERLGGEYVAEVMLEQLDYLSKEEVKQNA 151
>gi|307318941|ref|ZP_07598372.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|306895355|gb|EFN26110.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
Length = 188
Score = 178 bits (453), Expect = 2e-43, Method: Composition-based stats.
Identities = 48/149 (32%), Positives = 81/149 (54%), Gaps = 4/149 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
MLK + +G+W+ VTL S Y + +V + + + E+++IPS+ +G
Sbjct: 1 MLKLVLTGVWVCAVTLGSVYFSMQHASAPVVSD-AEADRRASQEYVPGEMITIPSIKDGA 59
Query: 61 LQAYFLVKLSFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+Q YFL KLSF + ++ + L+++ TD LY +L G D F + +
Sbjct: 60 VQGYFLAKLSFSASREGIAKLHAPLRQLVTDELYDMLVGSRFIDVADTATFDLAAFKVAV 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDM 146
K+ LN +LGS+ ISEVL+++L YL+ D+
Sbjct: 120 KDGLNRKLGSEVISEVLVEQLEYLTKEDV 148
>gi|209547958|ref|YP_002279875.1| hypothetical protein Rleg2_0350 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533714|gb|ACI53649.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 179
Score = 178 bits (452), Expect = 2e-43, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 86/152 (56%), Gaps = 5/152 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +G+W+ +TL S Y + T ++K E +++P + NG
Sbjct: 1 MIKLVLTGVWVCAITLASVYFSVY--LATAPAPAATDSKQSALELVKGETITVPIIGNGA 58
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL ++SF++N + L E+ TD L++LL G M D IK+F R++I
Sbjct: 59 ITGYFLGRVSFMMNKEMLKGVTLPLAEMTTDELFSLLVGNKMVDIAHIKSFDPKAFREEI 118
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149
K+ +N RLG +++++V++++L+YLS D++ +
Sbjct: 119 KKGMNERLGGEYVADVMLEQLDYLSKEDVKES 150
>gi|218509489|ref|ZP_03507367.1| hypothetical protein RetlB5_19254 [Rhizobium etli Brasil 5]
Length = 179
Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 86/153 (56%), Gaps = 5/153 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +G+W+ +TL S Y M T ++K E +++P + +G
Sbjct: 1 MVKLVLTGVWVCAITLASVYFSVY--MATAPAPAATDSKQSALELVKGETITVPVIGDGA 58
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL ++SF++N + L E+ TD L++LL G M D IK+F R++I
Sbjct: 59 ITGYFLGRISFMMNKDLLKGVTLPLTEMTTDELFSLLVGNKMVDLAHIKSFDAKAFRQEI 118
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNC 150
K+ +N RLG ++++EV++++L+YLS +++ N
Sbjct: 119 KKGMNERLGGEYVAEVMLEQLDYLSKEEVKQNA 151
>gi|241203136|ref|YP_002974232.1| hypothetical protein Rleg_0382 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857026|gb|ACS54693.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 179
Score = 178 bits (451), Expect = 3e-43, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 91/172 (52%), Gaps = 9/172 (5%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +G+W+ +TL S Y + T ++K E +++P + NG
Sbjct: 1 MIKLVLTGVWVCAITLASVYFSVY--LATAPAPAATDSKQSALELVKGETITVPIIGNGA 58
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL ++SF++N + L E+ TD L++LL G M D IK+F R++I
Sbjct: 59 ITGYFLGRVSFMMNKDMLKGVTLPLSEMTTDELFSLLVGNKMVDIAHIKSFDPKAFREEI 118
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIE 169
K+ +N RLG +++++V++++L+YLS +++ + + + ++E
Sbjct: 119 KKGMNERLGGEYVADVMLEQLDYLSKEEVK----ESSAGQPKKVGKPVKIVE 166
>gi|116250512|ref|YP_766350.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115255160|emb|CAK06234.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 179
Score = 178 bits (451), Expect = 4e-43, Method: Composition-based stats.
Identities = 46/152 (30%), Positives = 86/152 (56%), Gaps = 5/152 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +GIW+ +TL S Y + T ++K E +++P + NG
Sbjct: 1 MIKLVLTGIWVCAITLASVYFSVY--LATAPAPAATDSKQSALELVKGETITVPIIGNGA 58
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ YFL ++SF++N + L E+ TD L++LL G M D IK+F R++I
Sbjct: 59 ITGYFLGRVSFMMNKDMLKGVTLPLSEMTTDELFSLLVGNKMVDIAHIKSFDPKAFREEI 118
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149
K+ +N RLG +++++V++++L+YLS +++ +
Sbjct: 119 KKGMNERLGGEYVADVMLEQLDYLSKEEVKES 150
>gi|188579937|ref|YP_001923382.1| hypothetical protein Mpop_0669 [Methylobacterium populi BJ001]
gi|179343435|gb|ACB78847.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 148
Score = 177 bits (450), Expect = 4e-43, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 5/150 (3%)
Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61
++ L SG+WI VT+ S Y ++ P L + K ++IP V++G +
Sbjct: 1 MRVLLSGLWICAVTIASCYAAVTFGGGFFSKSTEPYL--EGLQYQKLAPINIPMVADGKV 58
Query: 62 QAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118
Q Y + L F + + D + + G DF ++ + + +I+
Sbjct: 59 QGYVIAVLVFTADAKLMHTLPVAPNAFVVDEAFRQIYGDTTIDFRKLARYDINGRLAQIR 118
Query: 119 EDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
+N RLGS + +VL+DELN+++ ++RS
Sbjct: 119 ARVNERLGSDVVKDVLVDELNFVAKREVRS 148
>gi|227820887|ref|YP_002824857.1| hypothetical protein NGR_c03060 [Sinorhizobium fredii NGR234]
gi|227339886|gb|ACP24104.1| hypothetical protein NGR_c03060 [Sinorhizobium fredii NGR234]
Length = 188
Score = 176 bits (446), Expect = 1e-42, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 78/150 (52%), Gaps = 4/150 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
MLK + +G+W+ VTL S Y + +V + + + E++++P + G
Sbjct: 1 MLKLVLTGVWVCAVTLGSVYFSMQYASAPIVSD-AEADRRASEEYVPGEIITVPVIEEGA 59
Query: 61 LQAYFLVKLSFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+Q YFL KLSF ++ + L+++ TD LY +L G D F + + +
Sbjct: 60 VQGYFLAKLSFSATREGIAKLHAPLRQVVTDELYDMLVGSRFVDVADTGTFDLPSFKVAV 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMR 147
K+ LN +LG + I+EVL+++L YL DM+
Sbjct: 120 KDGLNKKLGGEVITEVLVEQLEYLGKDDMK 149
>gi|240137269|ref|YP_002961738.1| hypothetical protein MexAM1_META1p0520 [Methylobacterium extorquens
AM1]
gi|240007235|gb|ACS38461.1| conserved hypothetical protein; putative membrane or exported
protein [Methylobacterium extorquens AM1]
Length = 148
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 5/150 (3%)
Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61
++ L SG+WI VT+ S Y ++ P L + K ++IP V+ G +
Sbjct: 1 MRILVSGLWICAVTIASCYAAVTFGGGFFSKSTEPYL--EGLQYQKLAPINIPMVAEGKV 58
Query: 62 QAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118
Q Y + L F + + D + + G DF ++ + + +I+
Sbjct: 59 QGYVIAVLVFTADAKLMHTLPVAPNAFVVDEAFRQIYGDTTIDFRKLARYDINGRLAQIR 118
Query: 119 EDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
+N RLGS + +VL+DELN+++ ++RS
Sbjct: 119 AKVNERLGSDVVKDVLVDELNFVAKREVRS 148
>gi|163850135|ref|YP_001638178.1| hypothetical protein Mext_0695 [Methylobacterium extorquens PA1]
gi|163661740|gb|ABY29107.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
Length = 148
Score = 175 bits (445), Expect = 2e-42, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 5/150 (3%)
Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61
++ L SG+WI VT+ S Y ++ P L + K ++IP V+ G +
Sbjct: 1 MRVLVSGLWICAVTIASCYAAVTFGGGFFSKSTEPYL--EGLQYQKLAPINIPMVAEGKV 58
Query: 62 QAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118
Q Y + L F + + D + + G DF ++ + + +I+
Sbjct: 59 QGYVIAVLVFTADAKLMHTLPVAPNAFVVDEAFRQIYGDSTIDFRKLARYDINGRLAQIR 118
Query: 119 EDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
+N RLGS + +VL+DELN+++ ++RS
Sbjct: 119 AKVNERLGSDVVKDVLVDELNFVAKREVRS 148
>gi|218528739|ref|YP_002419555.1| hypothetical protein Mchl_0706 [Methylobacterium chloromethanicum
CM4]
gi|254559280|ref|YP_003066375.1| hypothetical protein METDI0676 [Methylobacterium extorquens DM4]
gi|218521042|gb|ACK81627.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
gi|254266558|emb|CAX22322.1| conserved hypothetical protein; putative membrane or exported
protein [Methylobacterium extorquens DM4]
Length = 148
Score = 175 bits (443), Expect = 3e-42, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 69/150 (46%), Gaps = 5/150 (3%)
Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61
++ L SG+WI VT+ S Y ++ P L + K ++IP V+ G +
Sbjct: 1 MRVLVSGLWICAVTIASCYAAVTFGGGFFSKSTEPYL--EGLQYQKLAPINIPMVAEGKV 58
Query: 62 QAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118
Q Y + L F + + D + + G DF ++ + + +I+
Sbjct: 59 QGYVIAVLVFTADAKLMHTLPVAPNAFVVDEAFRQIYGDTTIDFRKLARYDINGRLAQIR 118
Query: 119 EDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
+N RLGS + +VL+DELN+++ ++RS
Sbjct: 119 AKVNERLGSDVVKDVLVDELNFVAKREVRS 148
>gi|254502808|ref|ZP_05114959.1| hypothetical protein SADFL11_2847 [Labrenzia alexandrii DFL-11]
gi|222438879|gb|EEE45558.1| hypothetical protein SADFL11_2847 [Labrenzia alexandrii DFL-11]
Length = 152
Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 3/152 (1%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K L +G+W+S+ LIS Y N+ A + + V++P + G
Sbjct: 1 MIKMLVAGVWMSIAMLISGYGTAKFISAQNQTNNQEETAYVGLDYETLKPVNVPILFEGA 60
Query: 61 LQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
LQ Y + KL F + R D + L DF ++ + D L + +
Sbjct: 61 LQGYVVAKLVFTADGDTLRKLPVPPHPFLVDEAFRALYADETLDFRNLERYDLDGLTEHL 120
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149
K N R+G + + +VL++E NY D+ S+
Sbjct: 121 KTVTNKRIGQKVVQDVLVEEFNYFDKADVLSH 152
>gi|114705546|ref|ZP_01438449.1| hypothetical protein FP2506_13809 [Fulvimarina pelagi HTCC2506]
gi|114538392|gb|EAU41513.1| hypothetical protein FP2506_13809 [Fulvimarina pelagi HTCC2506]
Length = 154
Score = 171 bits (433), Expect = 4e-41, Method: Composition-based stats.
Identities = 30/154 (19%), Positives = 65/154 (42%), Gaps = 4/154 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPL-AIKNTNIIKSELVSIPSVSNG 59
M+K + GIW +VV L S Y + + + ++ +++P +++
Sbjct: 1 MIKLIIVGIWATVVALGSSYAAITFTDKSGEAAGEKQSDYYAGLDYRSTDAITVPMIADK 60
Query: 60 VLQAYFLVKLSFIVN---DSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116
+Q Y + + + ++ ++ + D + L DF + L +
Sbjct: 61 RIQGYIIARFVYTIDGQIAAKLAVPPEPFVLDEAFRRLYASEDFDFANPSRYDLPGLMEA 120
Query: 117 IKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNC 150
IK +N+R G + + EVLI++ +Y+ +RS
Sbjct: 121 IKTSVNARYGDELVHEVLIEQFDYVPKDTVRSAT 154
>gi|217976252|ref|YP_002360399.1| hypothetical protein Msil_0054 [Methylocella silvestris BL2]
gi|217501628|gb|ACK49037.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length = 149
Score = 170 bits (431), Expect = 7e-41, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 70/149 (46%), Gaps = 5/149 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ S WI VTL + Y+ T ++ P + + + K+E +S+P +++G
Sbjct: 1 MIRIAASCAWILTVTLTATYLGATW-KSTAEQSTDSPHSPERLDRKKTEPISVPVIADGN 59
Query: 61 LQAYFLVKLSFIVNDSQE---RSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + + ++++ + TD + L DF ++ + L + +
Sbjct: 60 VAGYVVAQFIYLIDPEALNRLAAAPDAFITDEAFRKLY-VEKIDFAHLEKYDLPALTRFL 118
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDM 146
+N RLG+ I ++L+D+ N++S D+
Sbjct: 119 TTQVNRRLGADIIKDILVDQFNFVSKSDI 147
>gi|170748113|ref|YP_001754373.1| hypothetical protein Mrad2831_1695 [Methylobacterium radiotolerans
JCM 2831]
gi|170654635|gb|ACB23690.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 149
Score = 170 bits (430), Expect = 9e-41, Method: Composition-based stats.
Identities = 34/151 (22%), Positives = 68/151 (45%), Gaps = 5/151 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M + +F+G+WI +T++S + + D L + K ++IP +++G
Sbjct: 1 MTRIVFTGLWICAITVLSSFAVIAWMPDLPKPKAEEYL--EGLTYQKLRPLNIPIIADGA 58
Query: 61 LQAYFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+Q Y L + F + D + + DF +K + D +I
Sbjct: 59 VQGYILATIIFTAEAQLIKGAGVTPAPFVMDESFRQIYEDKDLDFRNLKKYNIDKRLDEI 118
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRS 148
K +N RLGS+ + +V+++ N+++ D+RS
Sbjct: 119 KRRVNERLGSEVVKDVMVENFNFVTKKDIRS 149
>gi|118589954|ref|ZP_01547358.1| hypothetical protein SIAM614_14855 [Stappia aggregata IAM 12614]
gi|118437451|gb|EAV44088.1| hypothetical protein SIAM614_14855 [Stappia aggregata IAM 12614]
Length = 151
Score = 169 bits (429), Expect = 1e-40, Method: Composition-based stats.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 1 MLKFLFSGIWISVVTLISFYM--LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSN 58
M+K L +G+W+S L S Y +L + + ++ A + V++P +
Sbjct: 1 MIKILVAGLWMSATMLASGYGTTQYLAAQKRVGDDEP---AFVGLDYETVNPVNVPILFE 57
Query: 59 GVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115
G LQ Y ++K+ F + R D + +L DF ++ + + +
Sbjct: 58 GTLQGYVVIKMVFTADGDTLRRLPVPPHPFLVDEAFRVLYSDETLDFRSLERYDLEAFTE 117
Query: 116 KIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149
++K+ N+RLG + +VL++E NY D+ ++
Sbjct: 118 RLKKSTNARLGRSVVHDVLVEEFNYFDKADVITH 151
>gi|27381958|ref|NP_773487.1| hypothetical protein bll6847 [Bradyrhizobium japonicum USDA 110]
gi|27355128|dbj|BAC52112.1| bll6847 [Bradyrhizobium japonicum USDA 110]
Length = 152
Score = 169 bits (428), Expect = 2e-40, Method: Composition-based stats.
Identities = 27/148 (18%), Positives = 64/148 (43%), Gaps = 4/148 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + +G+W+ ++T + Y + + + + K+ +S+P V NG
Sbjct: 1 MIRLVLAGLWVCILTAGTSYAVAYWKENGSLLP-AKDAYLDGLQYQKTRALSVPMVENGN 59
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+Q Y + + + V + D + + DF ++ + L I
Sbjct: 60 VQGYIVARFVYTVEARTMHQLNVPPEPFVVDEAFRRIYADDRLDFRKLARYDLSILTTGI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVD 145
K+ +N R+ + + +VL+++ NY+S +
Sbjct: 120 KQRVNERMQADVVQDVLVEDFNYVSKEE 147
>gi|254473462|ref|ZP_05086859.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
gi|211957578|gb|EEA92781.1| conserved hypothetical protein [Pseudovibrio sp. JE062]
Length = 162
Score = 168 bits (425), Expect = 4e-40, Method: Composition-based stats.
Identities = 29/162 (17%), Positives = 72/162 (44%), Gaps = 8/162 (4%)
Query: 2 LKFLFSGIWISVVTLISFYM--LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59
+K L +G+WI +VT+++ Y L+ D M++ + ++ + + +++P + +G
Sbjct: 1 MKVLVTGVWICLVTVVAAYFTALYKTDFDPMLQKNA---HLEGLDYQSTPTINVPVLEDG 57
Query: 60 VLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116
+ Y + + F V+ D + L+ +F Q+K L ++
Sbjct: 58 KIHGYIVAQFVFTVDSELLAKLAVPPHAFIVDEAFRLIYSKADKEFAQLKKSDLKQLTEE 117
Query: 117 IKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNAS 158
+++ +N R + + +VLI + + +R N + + +
Sbjct: 118 VRDRVNERFATDIVQDVLIQDFTFHVPASLRDNIMENAAQQA 159
>gi|296445184|ref|ZP_06887144.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
gi|296257358|gb|EFH04425.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
Length = 160
Score = 164 bits (416), Expect = 4e-39, Method: Composition-based stats.
Identities = 35/160 (21%), Positives = 59/160 (36%), Gaps = 16/160 (10%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
ML+ L GIW VTL S Y P ++ + K + +S+P +S G
Sbjct: 1 MLRLLLIGIWTCCVTLASTYGAAYWKSHRGA--PQPEAHVEKLEVRKVKPISVPIISEGQ 58
Query: 61 LQAYFLVKLSFIVND--------------SQERSYLKEIATDYLYTLLSGPPMGDFVQIK 106
L+ Y + S++V D + L DF I+
Sbjct: 59 LKGYISAEFSYVVVAPEKSHGGGHGEAAAGDGALDADSYVMDEAFRRLYADSNLDFRHIE 118
Query: 107 AFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDM 146
F + ++ + +N RLGS + E L+ ++ D+
Sbjct: 119 KFDLNAFTHEVTQRVNDRLGSGLVRETLVKSFAFVPKDDI 158
>gi|182680484|ref|YP_001834630.1| hypothetical protein Bind_3585 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636367|gb|ACB97141.1| conserved hypothetical protein [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 149
Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats.
Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 5/149 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
ML+ IWI +VT ++FY+ S+ + ++ + + +++P + +G
Sbjct: 1 MLRLFLCCIWICIVTSVAFYVGSTWSLSRALHPQTQEMS-GHIESKTTANINVPMIQSGE 59
Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
L Y + + ++ S + + D + +L DF ++ + L+++I
Sbjct: 60 LVGYIVTNFIYNIDQSDMKKLNISPEVFILDEAFHILF-SQDIDFNHLEKYQISALKERI 118
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDM 146
KE +N RLG FI ++LI E NY+ ++
Sbjct: 119 KERVNQRLGGDFIKDILIKEFNYIPKREI 147
>gi|319406962|emb|CBI80599.1| conserved exported hypothetical protein [Bartonella sp. 1-1C]
Length = 155
Score = 160 bits (404), Expect = 9e-38, Method: Composition-based stats.
Identities = 33/153 (21%), Positives = 80/153 (52%), Gaps = 6/153 (3%)
Query: 1 MLKFLFSGIWISVVTLIS-FYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59
M++ + G+W+ +V L + + L + ++D P+A++ +E++SIP + +G
Sbjct: 1 MIRMVAMGLWVCLVALGALVFSLRVNAVDPNTSEKSAPIAVE-IGSNNTEVMSIPILVDG 59
Query: 60 VLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116
+Q Y + + +++V+ E+ ++ + D ++ G D I+ F+ ++++
Sbjct: 60 DVQGYIIAQFAYVVDKIAEKEISIPVEVLINDTIFQYFWGS-YSDVRAIEKVKFEMIKER 118
Query: 117 IKEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149
I +D+N R + ++L+ + NYLS+ +R
Sbjct: 119 IIDDVNQRFSKAVLKDLLVKQFNYLSVDQIRDM 151
>gi|319405386|emb|CBI79005.1| conserved exported hypothetical protein [Bartonella sp. AR 15-3]
Length = 155
Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats.
Identities = 38/153 (24%), Positives = 83/153 (54%), Gaps = 6/153 (3%)
Query: 1 MLKFLFSGIWISVVTLIS-FYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59
M++ + G+WI +V L + + L + ++D P+AI+ +E++S+P +G
Sbjct: 1 MIRMIAMGLWICLVALGALVFSLKVNAVDPNKPEETTPIAIE-IGSNNTEIMSVPIFVDG 59
Query: 60 VLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116
+Q Y +V+L++IV+ + E+ + + D ++ G D +I+ F+ ++++
Sbjct: 60 NVQGYIIVQLAYIVDKTVEKEISISVGTLINDTIFQYFWGS-YSDVREIEKVKFEMIKER 118
Query: 117 IKEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149
I +D+N R + ++L+ + NYLS+ +RS
Sbjct: 119 IIDDVNQRFSKAVLKDLLVKQFNYLSVDKIRSM 151
>gi|319403945|emb|CBI77533.1| conserved exported hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 155
Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats.
Identities = 32/153 (20%), Positives = 79/153 (51%), Gaps = 6/153 (3%)
Query: 1 MLKFLFSGIWISVVTLIS-FYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59
M++ + G+W+ +V L + L + ++D P+A++ +E++S+P + +G
Sbjct: 1 MIRMIAMGLWVCLVALGALVLSLRVNAVDPNTSEKSAPVAVE-IGSNNTEVMSVPILVDG 59
Query: 60 VLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116
+Q Y + + +++V+ + E+ + + D ++ G D I+ F+ ++++
Sbjct: 60 DVQGYIIAQFAYVVDKTAEKEISIPVGVLINDTIFQYFWGS-YSDVRAIEKVKFEMIKER 118
Query: 117 IKEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149
I +D+N R + ++L+ + NYLS+ +R
Sbjct: 119 IIDDVNKRFSKAVLKDLLVKQFNYLSVDQIRGM 151
>gi|323136989|ref|ZP_08072069.1| flagellar basal body-associated protein FliL [Methylocystis sp.
ATCC 49242]
gi|322397750|gb|EFY00272.1| flagellar basal body-associated protein FliL [Methylocystis sp.
ATCC 49242]
Length = 149
Score = 158 bits (399), Expect = 3e-37, Method: Composition-based stats.
Identities = 32/150 (21%), Positives = 65/150 (43%), Gaps = 7/150 (4%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLA-IKNTNIIKSELVSIPSVSNG 59
M + LF G+W V TL + Y M +N P + ++ K + +++P +++G
Sbjct: 1 MFRTLFIGLWACVATLGATYGGAYW---RMHQNTAPAAEHAEKLDVRKLKPITVPVIADG 57
Query: 60 VLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116
VL+ Y + S + + + + + D + ++ DF I+ L +
Sbjct: 58 VLRGYVSAEFSMVGPQADKHEHTLDPESFFLDEAFRVIYSESKIDFSDIQKADLSTLTSQ 117
Query: 117 IKEDLNSRLGSQFISEVLIDELNYLSIVDM 146
I ++N R+G + E L+ ++ DM
Sbjct: 118 ITANVNQRMGKNVVKETLVRNFTFVPREDM 147
>gi|121602859|ref|YP_989414.1| hypothetical protein BARBAKC583_1155 [Bartonella bacilliformis
KC583]
gi|120615036|gb|ABM45637.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 156
Score = 155 bits (392), Expect = 2e-36, Method: Composition-based stats.
Identities = 30/157 (19%), Positives = 76/157 (48%), Gaps = 4/157 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + G+W+ +V+L + + P + +E+++IP + +G
Sbjct: 1 MIKMIALGLWVCLVSLGALMLGINSYKRDPNIPTTPVSTGEEIGSSDTEIMNIPILVDGS 60
Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIAT---DYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+Q Y + +L+++V+ ++ + ++ D ++ G + I+ FD ++++I
Sbjct: 61 VQGYLIAQLTYVVDKKAAQNIVVPVSVLIHDAIFQNFWGS-YSNVRMIERVKFDMVKQQI 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLG 154
+ +N R + + ++L+ + NY+S+ +R R G
Sbjct: 120 MDQVNQRFSNPILKDLLVKQFNYISVEKIRGATRRSG 156
>gi|158422283|ref|YP_001523575.1| hypothetical protein AZC_0659 [Azorhizobium caulinodans ORS 571]
gi|158329172|dbj|BAF86657.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 171
Score = 152 bits (385), Expect = 2e-35, Method: Composition-based stats.
Identities = 32/170 (18%), Positives = 72/170 (42%), Gaps = 4/170 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+KF+ G+W+ VTL S Y + + P + + +++P + +G
Sbjct: 1 MIKFVVIGVWVCAVTLASSYGAAYWAAGANLGKAEDP-YLPGLEYKRVPTITVPMIMDGQ 59
Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
++ Y + KL F + + + + ++ + + +I + ++ ++
Sbjct: 60 VKGYVIAKLVFTADAGTLKKLSVDPVVFVVNDAFSEIYNNGRVESGKISKYNLKDMTDRV 119
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSL 167
KE +N+RL I E+LID +NY+ D+R+ + ++
Sbjct: 120 KEKVNARLNGPVIQEILIDGINYVDKNDIRTVANQQQQSSKGQDKGDAKP 169
>gi|319898621|ref|YP_004158714.1| hypothetical protein BARCL_0449 [Bartonella clarridgeiae 73]
gi|319402585|emb|CBI76130.1| conserved exported protein of unknown function [Bartonella
clarridgeiae 73]
Length = 152
Score = 148 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 33/150 (22%), Positives = 77/150 (51%), Gaps = 6/150 (4%)
Query: 4 FLFSGIWISVVTLIS-FYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62
+ G+W+ +V L + + L + ++D P+ ++ +E++S+P + +G +Q
Sbjct: 1 MIAMGLWVCLVALGALVFGLRMSAVDPNSSEETAPIPVE-VGSNNTEIMSVPVLVDGDVQ 59
Query: 63 AYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119
Y +V+L+++V+ + E+ + + D ++ G D I+ F ++K+I +
Sbjct: 60 GYVIVQLTYVVDKTIEKEISIPVGVLINDIIFQYFWGS-YSDVRAIEKVKFQMIKKRIID 118
Query: 120 DLNSRLGSQFISEVLIDELNYLSIVDMRSN 149
D+N R + ++L+ + NYLS+ +R
Sbjct: 119 DVNQRFSKVVLKDLLVKQFNYLSVDKIRGM 148
>gi|300024566|ref|YP_003757177.1| hypothetical protein Hden_3061 [Hyphomicrobium denitrificans ATCC
51888]
gi|299526387|gb|ADJ24856.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC
51888]
Length = 155
Score = 146 bits (369), Expect = 1e-33, Method: Composition-based stats.
Identities = 33/155 (21%), Positives = 58/155 (37%), Gaps = 5/155 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M++ + + T+ Y E + I+K+ +VS+P +S+G
Sbjct: 1 MIRMILLAFVACLSTVGGVYGAVTWKSSMSAEPNKSENH--KLQILKTPMVSVPILSDGQ 58
Query: 61 LQAYFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+ Y + +L F + + + D + L+ D + L + I
Sbjct: 59 VLGYVVTRLQFTADSDLLKESSVQPEAFVADEAFRLIYETAPKDLKVGRKNAIKELSENI 118
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLR 152
N RLG + +V+ID YLS DM N R
Sbjct: 119 ASGTNERLGRNVVKDVMIDSWTYLSKQDMMKNHER 153
>gi|23009326|ref|ZP_00050417.1| hypothetical protein Magn03004241 [Magnetospirillum magnetotacticum
MS-1]
Length = 130
Score = 140 bits (352), Expect = 1e-31, Method: Composition-based stats.
Identities = 25/125 (20%), Positives = 49/125 (39%), Gaps = 5/125 (4%)
Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61
++ L +G+WI VT+ S Y ++ P L + K ++IP V+ G +
Sbjct: 1 MRVLVTGLWICAVTIASCYAAVTFGGGFFSKSTEPYL--EGLQYQKLAPINIPMVAEGKV 58
Query: 62 QAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118
Q Y + L F + + D + + G DF ++ + + +I+
Sbjct: 59 QGYVIAVLVFTADAKLMHTLPVAPNAFVVDEAFRQIYGDTTLDFRKLARYDINARLAQIR 118
Query: 119 EDLNS 123
+N
Sbjct: 119 AKVNE 123
>gi|319409201|emb|CBI82845.1| conserved exported hypothetical protein [Bartonella schoenbuchensis
R1]
Length = 152
Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats.
Identities = 25/149 (16%), Positives = 68/149 (45%), Gaps = 4/149 (2%)
Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63
+ G+W +V L + + + ++ + ++E++S+P + GV+Q
Sbjct: 1 MIAMGVWGCLVALGILMLSVKVNAVKPDISEASAPVVEEVSSGQTEVISVPILVEGVVQG 60
Query: 64 YFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120
Y + +L+++++ E+ L + D ++ D ++ F+ ++K+I ++
Sbjct: 61 YIISQLTYLIDKKVEKDVSLPLSVLINDAIFKCFW-DSYSDVRAVEKIKFETVKKQIIDE 119
Query: 121 LNSRLGSQFISEVLIDELNYLSIVDMRSN 149
+N + + ++L+ + NYL +R
Sbjct: 120 VNQHFPTPVVKDLLVKQFNYLPADQIRDM 148
>gi|265985843|ref|ZP_06098578.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|264664435|gb|EEZ34696.1| conserved hypothetical protein [Brucella sp. 83/13]
Length = 173
Score = 113 bits (284), Expect = 8e-24, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 52/116 (44%), Gaps = 5/116 (4%)
Query: 63 AYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119
+ +L + V+ + + L+ +D ++ G D ++ F+++R I
Sbjct: 54 GLCVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYGS-YSDTKSVEKVSFEDVRSSIIN 112
Query: 120 DLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQK-GSLIEKNKEP 174
DLN+R I ++L+++ NY+S ++R+ +R + + ++ EP
Sbjct: 113 DLNARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPGGRNRKADAEPAAQDAEP 168
>gi|254720784|ref|ZP_05182595.1| hypothetical protein Bru83_15047 [Brucella sp. 83/13]
Length = 117
Score = 108 bits (269), Expect = 4e-22, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 66 LVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN 122
+ +L + V+ + + L+ +D ++ G D ++ F+++R I DLN
Sbjct: 1 MAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYGS-YSDTKSVEKVSFEDVRSSIINDLN 59
Query: 123 SRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQK-GSLIEKNKEP 174
+R I ++L+++ NY+S ++R+ +R + + ++ EP
Sbjct: 60 ARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPGGRNRKADAEPAAQDAEP 112
>gi|261756161|ref|ZP_05999870.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
gi|261736145|gb|EEY24141.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp.
F5/99]
Length = 107
Score = 101 bits (253), Expect = 3e-20, Method: Composition-based stats.
Identities = 21/108 (19%), Positives = 48/108 (44%), Gaps = 4/108 (3%)
Query: 69 LSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL 125
L + V+ + + L+ +D ++ G D ++ F+++R I DLN+R
Sbjct: 1 LVYTVDSNIHKKLTVPLEYFISDEIFHKFYGS-YSDTKSVEKVSFEDVRSSIINDLNARF 59
Query: 126 GSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKE 173
I ++L+++ NY+S ++R+ +R + + + E
Sbjct: 60 PEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPGGRNRKADAEPAAQSE 107
>gi|306840125|ref|ZP_07472910.1| Hypothetical protein BROD_2998 [Brucella sp. NF 2653]
gi|306404770|gb|EFM61064.1| Hypothetical protein BROD_2998 [Brucella sp. NF 2653]
Length = 100
Score = 96.6 bits (239), Expect = 1e-18, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Query: 81 YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNY 140
L+ +D ++ G D ++ F+++R I DLN+R I ++L+++ NY
Sbjct: 2 PLEYFISDEIFHKFYGS-YSDTKSVEKVSFEDVRSSIINDLNARFPEPVIKDLLVEQFNY 60
Query: 141 LSIVDMRSNCLRLGSNASDLMTQK-GSLIEKNKEP 174
+S ++R+ +R + + ++ EP
Sbjct: 61 ISSEEIRTMNMRAHAQPGGRNRKADAEPAAQDAEP 95
>gi|312115268|ref|YP_004012864.1| hypothetical protein Rvan_2550 [Rhodomicrobium vannielii ATCC
17100]
gi|311220397|gb|ADP71765.1| hypothetical protein Rvan_2550 [Rhodomicrobium vannielii ATCC
17100]
Length = 151
Score = 94.2 bits (233), Expect = 6e-18, Method: Composition-based stats.
Identities = 32/149 (21%), Positives = 65/149 (43%), Gaps = 5/149 (3%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M + L + I+ VTL + + + + + +A + IK + ++IP + G
Sbjct: 1 MFRDLATAALIAAVTLGAVFAGGIAANRAISSPPAEQVAEEIP--IKLKQLTIPVIETGG 58
Query: 61 LQAYFLVKLSFIVN---DSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
+Q Y L+++S + N +Y++ TD L ++ + I
Sbjct: 59 VQGYVLLQMSVVANVKSGGHTSNYIELAVTDEALKALFLKDRLALSKLTKDSLPKITDDI 118
Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDM 146
+++ NS+LG I EV I L++L ++
Sbjct: 119 RKNANSKLGGDTIKEVFISSLHFLGKEEL 147
>gi|189023197|ref|YP_001932938.1| hypothetical protein BAbS19_II10090 [Brucella abortus S19]
gi|189021771|gb|ACD74492.1| hypothetical protein BAbS19_II10090 [Brucella abortus S19]
Length = 93
Score = 93.9 bits (232), Expect = 8e-18, Method: Composition-based stats.
Identities = 19/93 (20%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
Query: 81 YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNY 140
L+ +D ++ G D ++ F+++R I DLN+R I ++L+++ NY
Sbjct: 2 PLEYFISDEIFHKFYGS-YSDTKSVEKVSFEDVRSSIINDLNARFPEPVIKDLLVEQFNY 60
Query: 141 LSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKE 173
+S ++R+ +R + + + E
Sbjct: 61 ISSEEIRTMNMRAHAQPGGRNRKADAEPAAQSE 93
>gi|218463243|ref|ZP_03503334.1| hypothetical protein RetlK5_29134 [Rhizobium etli Kim 5]
Length = 76
Score = 88.8 bits (219), Expect = 3e-16, Method: Composition-based stats.
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60
M+K + +GIW+ +TL S Y M T ++K E +++P + +G
Sbjct: 1 MIKLVLTGIWVCAITLASVYFSVY--MATAPAPAATDTKQSALELVKGETITVPVIGDGA 58
Query: 61 LQAYFLVKLSFIVNDSQE 78
+ YFL ++SF++N
Sbjct: 59 ITGYFLGRVSFMMNKDML 76
>gi|218681908|ref|ZP_03529587.1| hypothetical protein RetlC8_24020 [Rhizobium etli CIAT 894]
Length = 79
Score = 74.2 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 100 GDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASD 159
D IK+F R +IK+ +N RLG +++++V++++L+YLS D++ +
Sbjct: 1 VDIAHIKSFDPKAFRDEIKKGMNERLGGEYVADVMLEQLDYLSKEDVKES---SAGQPKK 57
Query: 160 LMTQ 163
+ T
Sbjct: 58 VSTP 61
>gi|209964636|ref|YP_002297551.1| flagellar basal body-associated protein FliL, putative
[Rhodospirillum centenum SW]
gi|209958102|gb|ACI98738.1| flagellar basal body-associated protein FliL, putative
[Rhodospirillum centenum SW]
Length = 170
Score = 47.2 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/121 (16%), Positives = 48/121 (39%), Gaps = 4/121 (3%)
Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER 79
Y++F + D P + + + +P + + ++ ++ ++ V D +
Sbjct: 42 YIMFGQHKDGAHAAEEKPKPVGPPAFVTIGPLILPVIGDKRVEQTVMLTVAIEVPDEATK 101
Query: 80 SYLKEIA--TDYLY-TLLSGP-PMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLI 135
+K+I+ + + T L G + + +R K+ E LG+ + +VLI
Sbjct: 102 EQVKQISPRLNAAFLTALYGNIGKAQVLDGQIIDVAGVRSKLMEAAVKELGADVVKDVLI 161
Query: 136 D 136
Sbjct: 162 Q 162
>gi|114566395|ref|YP_753549.1| flagellar protein (FliL)-like protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
gi|114337330|gb|ABI68178.1| flagellar protein (FliL)-like protein [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 159
Score = 39.9 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 63/142 (44%), Gaps = 9/142 (6%)
Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61
+K + G+ + VV + Y L M ++ + N+++ + ++++
Sbjct: 19 MKLIIIGLLVFVVAVGGSYFLMKSLMAPLMPKQEGAGKLMTGNLVEVGEFTT-NINDVNG 77
Query: 62 QAYFLVKLSFIVNDSQERSYLK-----EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116
Q + VK++ V+ +++ K + D + T++S + D +NL+ +
Sbjct: 78 QRFLKVKVTVEVSTDDKKAQEKITQYMPVIKDSILTIISSKTVADLDVRNR---NNLKAE 134
Query: 117 IKEDLNSRLGSQFISEVLIDEL 138
IK DLN+++G+ + V +
Sbjct: 135 IKNDLNAKIGANTVLNVYFTDF 156
>gi|288553741|ref|YP_003425676.1| signal transduction diguanylate cyclase [Bacillus pseudofirmus OF4]
gi|288544901|gb|ADC48784.1| Signal transduction diguanylate cyclase (GAF-GAF-GGDEF domains)
[Bacillus pseudofirmus OF4]
Length = 628
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 56/163 (34%), Gaps = 44/163 (26%)
Query: 50 LVSIPSVSNGVLQAYFLV-----------------------KLSFIVNDSQERSYLKEIA 86
L+++P + +GVL+ +V L+F ++ L+++
Sbjct: 408 LLAVPMIQSGVLKGVVIVLDQKPYCFSYDHFKLLQSLAHHSTLAFT--NAMLHEKLEKLV 465
Query: 87 TDYLYTLLSGPPMGD---FVQIKA--------FGFDNLRKKIKEDLNSRLGSQFISEVLI 135
T L D ++ F DN ++ +N G Q EVLI
Sbjct: 466 ITDHLTSLYSRSYLDQQIRASLENDGYGTYLLFDVDNFKQ-----INDTHGHQIGDEVLI 520
Query: 136 DELNYLSIVDMRSN--CLRLGSNASDLMTQKGSLIEKNKEPLK 176
++ + ++R R G L K +L + K ++
Sbjct: 521 -QVAKILKENIRDEDIAARWGGEELALYLPKVNLEDAKKIAVR 562
>gi|51598784|ref|YP_072972.1| phnP protein [Borrelia garinii PBi]
gi|51573355|gb|AAU07380.1| phnP protein [Borrelia garinii PBi]
Length = 253
Score = 39.2 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 20/137 (14%), Positives = 48/137 (35%), Gaps = 27/137 (19%)
Query: 21 MLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ-AYFLVKLSFIVNDSQER 79
+ ++ V P+ K I+ IP + ++ Y + L+++ +
Sbjct: 122 LSGKANIIPNVIRDFEPIFFKGLEIVP-----IPLIHGEIVSLGYRIGNLAYLTD----- 171
Query: 80 SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFD------NLRKKIKE--DLNSRLG--SQF 129
+ + Y L D + I A N + I E +N ++ +
Sbjct: 172 ---VKFIPEESYDYL---KNLDLLIIDAIRIKSHPAHLNFSEAICEVRKINPKISYFTHI 225
Query: 130 ISEVLIDELNYLSIVDM 146
+++ +E +YL ++
Sbjct: 226 AHDIMHEEFDYLEKDNI 242
>gi|308812404|ref|XP_003083509.1| chloroplast phytoene desaturase precursor (ISS) [Ostreococcus tauri]
gi|116055390|emb|CAL58058.1| chloroplast phytoene desaturase precursor (ISS) [Ostreococcus tauri]
Length = 1546
Score = 39.2 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 21/134 (15%), Positives = 50/134 (37%), Gaps = 23/134 (17%)
Query: 53 IPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDN 112
+P ++ G Q Y + V + +++++ + +D L+ ++ DF+ +
Sbjct: 1201 VPMLAGG--QGYIDAQDELSVEEWMKKNFMPKRVSDELF--IAMGKALDFIDVDKLSMTV 1256
Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD-------MRSNCLRLGSNASDLMTQKG 165
+ + +N GS+ +L M+ + R+G + T
Sbjct: 1257 ILTAMNRFINETHGSKT---------AFLDGNQPDRLCAPMKEHIERVGGGEVMVDTPMQ 1307
Query: 166 SL---IEKNKEPLK 176
+ +E N E +K
Sbjct: 1308 EILTDVEGNVEGVK 1321
>gi|297617149|ref|YP_003702308.1| flagellar basal body-associated protein FliL [Syntrophothermus
lipocalidus DSM 12680]
gi|297144986|gb|ADI01743.1| flagellar basal body-associated protein FliL [Syntrophothermus
lipocalidus DSM 12680]
Length = 160
Score = 39.2 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 26/142 (18%), Positives = 55/142 (38%), Gaps = 10/142 (7%)
Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDT--MVENHVPPLAIKNTNIIKSELVSIPSVSNG 59
L+ + G+ + ++ + Y + + E + + + E + ++ +
Sbjct: 21 LQIIVVGLVVFLMCMGGAYFMIRSLLAPLLPQEEEKKSSSGEVVLVEAGEFTT--NIYDI 78
Query: 60 VLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116
Y ++ V D + L+ + D + ++LS + D DNLRK
Sbjct: 79 NGTRYLKAEVYLQVPDKKVEKELETVMPVVKDEILSILSSQTVADLDVRNR---DNLRKT 135
Query: 117 IKEDLNSRLGSQFISEVLIDEL 138
IKE LN +LG + ++ V
Sbjct: 136 IKERLNRKLGGEKVTGVYFTSF 157
>gi|75909924|ref|YP_324220.1| hypothetical protein Ava_3720 [Anabaena variabilis ATCC 29413]
gi|75703649|gb|ABA23325.1| conserved hypothetical protein [Anabaena variabilis ATCC 29413]
Length = 448
Score = 38.8 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 12/83 (14%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 59 GVLQAYFLVKLS-FIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
G + + + + F + + + + ++ + D G + DF I+ F + +
Sbjct: 371 GRITG--MTRYACFWIENGEIIAPIENLRFDESLYRFWGENLIDFTNIQEFIPEVGTYES 428
Query: 118 KEDLNSRLGSQFISEVLIDELNY 140
++ LG + +L+++ Y
Sbjct: 429 RQ-----LGGSLVPGMLVNDFTY 446
>gi|89069815|ref|ZP_01157150.1| hypothetical protein OG2516_10024 [Oceanicola granulosus HTCC2516]
gi|89044616|gb|EAR50732.1| hypothetical protein OG2516_10024 [Oceanicola granulosus HTCC2516]
Length = 177
Score = 38.8 bits (89), Expect = 0.35, Method: Composition-based stats.
Identities = 20/117 (17%), Positives = 38/117 (32%), Gaps = 7/117 (5%)
Query: 25 RSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL- 82
+ E + ++ + + +P V G + A ++ LS V
Sbjct: 51 ADVAAAPEEEPGDVVVEGRDYARLNNQFVVPVVEEGSVAALVVLSLSLEVAAGSRDVVFA 110
Query: 83 -KEIATDYLYTLLSGPPMG---DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLI 135
+ D L +L G D A LR +++ +G + +VLI
Sbjct: 111 HEPKLRDALLQVLFGHANIGGFDGNFTSAANMRVLRSSLRDAARETMGDHVL-DVLI 166
>gi|17228584|ref|NP_485132.1| hypothetical protein all1089 [Nostoc sp. PCC 7120]
gi|17130435|dbj|BAB73046.1| all1089 [Nostoc sp. PCC 7120]
Length = 448
Score = 38.0 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Query: 59 GVLQAYFLVKLS-FIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
G + + + + F + + + + ++ + D G + DF + F + +
Sbjct: 371 GRITG--MTRYACFWIENGEIIAPIENLRFDESLYRFWGDNLIDFTNFQEFIPEVGTYES 428
Query: 118 KEDLNSRLGSQFISEVLIDELNY 140
++ LG + +L+++ Y
Sbjct: 429 RQ-----LGGSLVPGMLVNDFTY 446
>gi|150020567|ref|YP_001305921.1| hypothetical protein Tmel_0672 [Thermosipho melanesiensis BI429]
gi|149793088|gb|ABR30536.1| hypothetical protein Tmel_0672 [Thermosipho melanesiensis BI429]
Length = 100
Score = 38.0 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 96 GPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLID 136
G + I A ++KI++ +N +LG + V+I
Sbjct: 51 GNIYVECESIYATELQFFKEKIRDRINEKLGEDMVKRVIIK 91
>gi|283834439|ref|ZP_06354180.1| flagellar basal body-associated protein FliL [Citrobacter youngae
ATCC 29220]
gi|291069986|gb|EFE08095.1| flagellar basal body-associated protein FliL [Citrobacter youngae
ATCC 29220]
Length = 156
Score = 38.0 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 19/159 (11%), Positives = 57/159 (35%), Gaps = 23/159 (14%)
Query: 1 MLKFLFSGIWISVVTLI----SFYMLF-------LRSMDTMVENHVPPLAIKNTNIIKSE 49
M K + + + SVV L + + ++ + + ++ +
Sbjct: 1 MKKIVIACLISSVVALGIAGGAGWGVYHYMKKGTTAAAEKPAHEAEDSQDESSSIFVSLP 60
Query: 50 LVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK-------EIATDYLYTLLSGP-PMGD 101
+ N Y + +L +V+ ++ +K I D L +
Sbjct: 61 ETVVTLHDNEGGDRYMVAELVMVVDTEKDAEKIKKDEPLYQSITVDELSNMKYEDIRALK 120
Query: 102 FVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNY 140
+I+ F+NL+ ++ + ++ + + ++L+ ++ +
Sbjct: 121 ISEIRKKIFENLKAELAKR---KMATPY-KDILVKKVVF 155
>gi|254486346|ref|ZP_05099551.1| conserved hypothetical protein [Roseobacter sp. GAI101]
gi|214043215|gb|EEB83853.1| conserved hypothetical protein [Roseobacter sp. GAI101]
Length = 168
Score = 37.6 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 50/162 (30%), Gaps = 29/162 (17%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMD---------------TMVENHVPPLAIKNT-- 43
M K + + + L FLR E + T
Sbjct: 1 MAKLIPILVLVICAALGLTAGKFLRPPPAEPAESVSEEIDGEKPAEEAETSEQEPEGTSP 60
Query: 44 --NIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL--KEIATDYLYTLLSGPP 98
+ +K +P V++ + A ++ LS +E L + D +L
Sbjct: 61 DRDYVKMNNQFVVPIVTDNRVSAMVVLSLSIEAPLGKEDDVLRREPKLRDSFLRVLFTHA 120
Query: 99 MG-----DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLI 135
+F I+ L++ +KE G+ + +VLI
Sbjct: 121 NIGGFDGEFTSIEK--LGGLKRALKEVGQRDAGADLVKDVLI 160
>gi|220909364|ref|YP_002484675.1| Zn-dependent protease [Cyanothece sp. PCC 7425]
gi|219865975|gb|ACL46314.1| Zn-dependent protease [Cyanothece sp. PCC 7425]
Length = 447
Score = 37.6 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 11/86 (12%), Positives = 30/86 (34%), Gaps = 8/86 (9%)
Query: 56 VSNGVLQAYFLVKLS-FIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114
+ G + + + + F V + + ++++ D G + DF
Sbjct: 367 IPGGRITG--MTRYACFWVEKGEIVAPIQDLRWDESLYSFWGDHLIDFT-----DTQEFI 419
Query: 115 KKIKEDLNSRLGSQFISEVLIDELNY 140
+I LG + +L+++ +
Sbjct: 420 PEIGTYDGRSLGGSLVPGMLVEDFTF 445
>gi|167767098|ref|ZP_02439151.1| hypothetical protein CLOSS21_01616 [Clostridium sp. SS2/1]
gi|167711073|gb|EDS21652.1| hypothetical protein CLOSS21_01616 [Clostridium sp. SS2/1]
Length = 525
Score = 37.2 bits (85), Expect = 0.90, Method: Composition-based stats.
Identities = 20/124 (16%), Positives = 44/124 (35%), Gaps = 9/124 (7%)
Query: 31 VENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYL 90
N+ KS ++S P + ++ + +++ QE + T
Sbjct: 391 SGNYSEKFEQDIVEADKSVVISSPDIYQDKIE-----RFLYLIKQRQEAGVDVHVITRNP 445
Query: 91 YTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLI--DELNYLSIVDMRS 148
+ + G P + I + +K+++ R I + L+ +N L D+
Sbjct: 446 ESTMYGNPEILYEIITRMKSQGVDIYLKDEVEERF--AVIDDELVWHGGVNLLGKEDIWD 503
Query: 149 NCLR 152
N +R
Sbjct: 504 NLMR 507
>gi|293411935|ref|ZP_06654660.1| conserved hypothetical protein [Escherichia coli B354]
gi|291469490|gb|EFF11979.1| conserved hypothetical protein [Escherichia coli B354]
Length = 1172
Score = 37.2 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 90 LYTLLSGPPMGDFVQIKAFGFD-NLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD-MR 147
L+ P D F R ++ E LN R G +++ I YL +R
Sbjct: 404 LFERFINPERLDLPD-ADLDFSQARRHEVIEYLNERYGEDYVAG--IPNFTYLGAASALR 460
Query: 148 SNCLRLGSNASDLMTQKG-SLIEKNKEPLK 176
G ++D+ K +E + PL+
Sbjct: 461 DTARIYGVESADMAVSKELKNVEDDSLPLE 490
>gi|220979967|emb|CAP72159.1| Putative DNA polymerase III alpha subunit [Escherichia coli LF82]
Length = 1168
Score = 37.2 bits (85), Expect = 0.93, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 90 LYTLLSGPPMGDFVQIKAFGFD-NLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD-MR 147
L+ P D F R ++ E LN R G +++ I YL +R
Sbjct: 404 LFERFINPERLDLPD-ADLDFSQARRHEVIEYLNERYGEDYVAG--IPNFTYLGAASALR 460
Query: 148 SNCLRLGSNASDLMTQKG-SLIEKNKEPLK 176
G ++D+ K +E + PL+
Sbjct: 461 DTARIYGVESADMAVSKELKNVEDDSLPLE 490
>gi|221065922|ref|ZP_03542027.1| conserved hypothetical protein [Comamonas testosteroni KF-1]
gi|220710945|gb|EED66313.1| conserved hypothetical protein [Comamonas testosteroni KF-1]
Length = 269
Score = 37.2 bits (85), Expect = 0.94, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 38/121 (31%), Gaps = 32/121 (26%)
Query: 16 LISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVND 75
L + + S+ + + LA+ + S ++P+++ L+ Y
Sbjct: 145 LPAMFDNLPASLPHIQAGKLKALAVAGSERSPSLP-NVPTIAESGLKGY----------- 192
Query: 76 SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLI 135
A D + + GP D + K+ +N L + + L+
Sbjct: 193 ----------AVDPWFGV-YGPAKLD---------PAITAKLNTAINQALSDPAVKDKLV 232
Query: 136 D 136
Sbjct: 233 Q 233
>gi|119509996|ref|ZP_01629137.1| hypothetical protein N9414_20150 [Nodularia spumigena CCY9414]
gi|119465320|gb|EAW46216.1| hypothetical protein N9414_20150 [Nodularia spumigena CCY9414]
Length = 448
Score = 37.2 bits (85), Expect = 0.95, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 32/83 (38%), Gaps = 8/83 (9%)
Query: 59 GVLQAYFLVKLS-FIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
G + + + + F V + + + ++ + D G + +F + F + +
Sbjct: 371 GRITG--MTRYACFWVENGEIIAPIENLRFDESLYRFWGDNLVEFTNFQEFIPEVGTYES 428
Query: 118 KEDLNSRLGSQFISEVLIDELNY 140
++ LG + +L++ Y
Sbjct: 429 RD-----LGGSLVPGMLVNNFTY 446
>gi|282899567|ref|ZP_06307531.1| conserved hypothetical protein [Cylindrospermopsis raciborskii
CS-505]
gi|281195446|gb|EFA70379.1| conserved hypothetical protein [Cylindrospermopsis raciborskii
CS-505]
Length = 447
Score = 37.2 bits (85), Expect = 0.96, Method: Composition-based stats.
Identities = 13/83 (15%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 59 GVLQAYFLVKLS-FIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
G + + + + F V + + + ++ + D G + DF F +L ++
Sbjct: 370 GRITG--MTRYACFWVENGEMVAPIENLRFDESLYDFWGEKLVDFTS-----FQDLIPEV 422
Query: 118 KEDLNSRLGSQFISEVLIDELNY 140
+LG + +L+++ +Y
Sbjct: 423 GTYTKRQLGGSLVPGMLVEDFSY 445
>gi|264679252|ref|YP_003279159.1| TctC [Comamonas testosteroni CNB-2]
gi|262209765|gb|ACY33863.1| TctC [Comamonas testosteroni CNB-2]
Length = 324
Score = 37.2 bits (85), Expect = 0.97, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 38/121 (31%), Gaps = 32/121 (26%)
Query: 16 LISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVND 75
L + + S+ + + LA+ + S ++P+++ L+ Y
Sbjct: 200 LPAMFDNLPASLPHIQAGKLKALAVAGSERSPSLP-NVPTIAESGLKGY----------- 247
Query: 76 SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLI 135
A D + + GP D + K+ +N L + + L+
Sbjct: 248 ----------AVDPWFGV-YGPAKLD---------PAITAKLNTAINQALSDPAVKDKLV 287
Query: 136 D 136
Sbjct: 288 Q 288
>gi|299531770|ref|ZP_07045172.1| TctC [Comamonas testosteroni S44]
gi|298720211|gb|EFI61166.1| TctC [Comamonas testosteroni S44]
Length = 324
Score = 37.2 bits (85), Expect = 0.99, Method: Composition-based stats.
Identities = 17/121 (14%), Positives = 38/121 (31%), Gaps = 32/121 (26%)
Query: 16 LISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVND 75
L + + S+ + + LA+ + S ++P+++ L+ Y
Sbjct: 200 LPAMFDNLPASLPHIQAGKLKALAVAGSERSPSLP-NVPTIAESGLKGY----------- 247
Query: 76 SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLI 135
A D + + GP D + K+ +N L + + L+
Sbjct: 248 ----------AVDPWFGV-YGPAKLD---------PAITAKLNTAINQALSDPAVKDKLV 287
Query: 136 D 136
Sbjct: 288 Q 288
>gi|258592717|emb|CBE69026.1| Type I restriction enzyme EcoEI M protein (M.EcoEI) [NC10 bacterium
'Dutch sediment']
Length = 503
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 18/78 (23%), Positives = 29/78 (37%), Gaps = 12/78 (15%)
Query: 74 NDSQERSYLKEIATDYLY---TLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFI 130
+ L + D L+ L+G GD + L KE N L +
Sbjct: 87 DKGLTGESLLKFINDELFPYLRSLTGTVAGDARDV-------LAAVFKETYNRMLSGYLL 139
Query: 131 SEV--LIDELNYLSIVDM 146
+V L++ LN+ S D+
Sbjct: 140 RDVVNLVNRLNFNSSDDI 157
>gi|323934241|gb|EGB30665.1| bacterial DNA polymerase III alpha [Escherichia coli E1520]
Length = 787
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 90 LYTLLSGPPMGDFVQIKAFGFD-NLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD-MR 147
L+ P D F R ++ E LN R G +++ I YL +R
Sbjct: 404 LFERFINPERLDLPD-ADLDFSQARRHEVIEYLNERYGEDYVAG--IPNFTYLGAASALR 460
Query: 148 SNCLRLGSNASDLMTQKG-SLIEKNKEPLK 176
G ++D+ K +E + PL+
Sbjct: 461 DTARIYGVESADMAVSKELKNVEDDSLPLE 490
>gi|309797648|ref|ZP_07692035.1| DNA polymerase III, alpha subunit [Escherichia coli MS 145-7]
gi|308118745|gb|EFO56007.1| DNA polymerase III, alpha subunit [Escherichia coli MS 145-7]
Length = 787
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 20/90 (22%), Positives = 33/90 (36%), Gaps = 6/90 (6%)
Query: 90 LYTLLSGPPMGDFVQIKAFGFD-NLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD-MR 147
L+ P D F R ++ E LN R G +++ I YL +R
Sbjct: 404 LFERFINPERLDLPD-ADLDFSQARRHEVIEYLNERYGEDYVAG--IPNFTYLGAASALR 460
Query: 148 SNCLRLGSNASDLMTQKG-SLIEKNKEPLK 176
G ++D+ K +E + PL+
Sbjct: 461 DTARIYGVESADMAVSKELKNVEDDSLPLE 490
>gi|89056681|ref|YP_512132.1| hypothetical protein Jann_4190 [Jannaschia sp. CCS1]
gi|88866230|gb|ABD57107.1| hypothetical protein Jann_4190 [Jannaschia sp. CCS1]
Length = 171
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 42/107 (39%), Gaps = 6/107 (5%)
Query: 39 AIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDSQERSY--LKEIATDYLYTLLS 95
A + T ++ +P V +G +++ ++ LS V+ + L+ D ++
Sbjct: 61 AGEGTEYVRINNQFVVPIVRSGAVRSLVVMSLSLEVDTGVNSAVFSLEPRLRDSFLRVMF 120
Query: 96 GPPM---GDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139
D +A LR ++E S LG +VLI ++
Sbjct: 121 AHANAGGFDGRFTEAEAMAPLRSALREAAQSVLGRGTTHDVLITDIT 167
>gi|282897584|ref|ZP_06305584.1| conserved hypothetical protein [Raphidiopsis brookii D9]
gi|281197507|gb|EFA72403.1| conserved hypothetical protein [Raphidiopsis brookii D9]
Length = 447
Score = 36.8 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/83 (16%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Query: 59 GVLQAYFLVKLS-FIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
G + + + + F V D + S ++ + D G + D F +L ++
Sbjct: 370 GRITG--MTRYACFWVEDGEMISPIENLRFDESLYDFWGEKLVDLTN-----FQDLIPEV 422
Query: 118 KEDLNSRLGSQFISEVLIDELNY 140
+LG + +L+++ +Y
Sbjct: 423 GTYTKRQLGGSLVPGMLVEDFSY 445
>gi|292669772|ref|ZP_06603198.1| flagellar basal body-associated protein FliL [Selenomonas noxia
ATCC 43541]
gi|292648569|gb|EFF66541.1| flagellar basal body-associated protein FliL [Selenomonas noxia
ATCC 43541]
Length = 173
Score = 36.8 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Query: 73 VNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISE 132
V D + S + D L P+ +F K D L+K++K+ LN RLG + +
Sbjct: 108 VTDGKVGSVAETKILDTTMQFLRAAPLEEFDASKQ---DALKKQLKDALNERLGQGSVYD 164
Query: 133 VLIDEL 138
V I
Sbjct: 165 VYITSF 170
>gi|307205405|gb|EFN83746.1| Trafficking protein particle complex subunit 3 [Harpegnathos
saltator]
Length = 768
Score = 36.8 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 18/84 (21%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 92 TLLSG-PPMGD-FVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149
L++G D IK + K++L++RL + ++ + NY S D+ +
Sbjct: 215 RLINGIDDTSDTLDDIKKVDIHYSDGEEKKELSTRL----VKDLAFQKFNYKSKSDILQH 270
Query: 150 CLRLGSNASDLMTQKGSLIEKNKE 173
+ SD I++N+E
Sbjct: 271 HRNKKFDDSDSEVDSEEKIDRNEE 294
>gi|210623493|ref|ZP_03293838.1| hypothetical protein CLOHIR_01788 [Clostridium hiranonis DSM 13275]
gi|210153551|gb|EEA84557.1| hypothetical protein CLOHIR_01788 [Clostridium hiranonis DSM 13275]
Length = 283
Score = 36.5 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 8/67 (11%)
Query: 85 IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSI- 143
+ D + + P DF +I + ++I+ LN R EVL D+LN L+
Sbjct: 69 MGLDEIKRYIDNPNEEDFKEIAEVKIKEIDQEIRT-LNRR------REVLEDKLNKLNKC 121
Query: 144 VDMRSNC 150
D+R
Sbjct: 122 DDLRKKN 128
>gi|240102748|ref|YP_002959057.1| translation-associated GTPase [Thermococcus gammatolerans EJ3]
gi|239910302|gb|ACS33193.1| GTPase, MMR-HSR1 family [Thermococcus gammatolerans EJ3]
Length = 397
Score = 36.5 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 9/82 (10%)
Query: 55 SVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114
+ G + Y +V S + ++ P DF +K +
Sbjct: 235 LIEEGKKRGYIVVPTSAAAELTLRKAAKAGFIE-------YIPGSSDFKILKKMNPKQEK 287
Query: 115 --KKIKEDLNSRLGSQFISEVL 134
+ IKE + R GS + EV+
Sbjct: 288 ALELIKEKVLDRFGSTGVQEVI 309
>gi|255533727|ref|YP_003094099.1| helix-turn-helix type 11 domain-containing protein [Pedobacter
heparinus DSM 2366]
gi|255346711|gb|ACU06037.1| Helix-turn-helix type 11 domain protein [Pedobacter heparinus DSM
2366]
Length = 230
Score = 36.1 bits (82), Expect = 2.1, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120
+Q YFL +SF +++ ++ + + + + ++KA R+K+ E
Sbjct: 61 VQGYFLPPVSFSQDEANALLIMERLVSRFADRSILANYTTALNKVKAVLKHAQREKL-EL 119
Query: 121 LNSRLGSQFISEVLIDELNYLS 142
LN + Q E+L DE ++LS
Sbjct: 120 LNESIKFQLNHEMLNDEFDHLS 141
>gi|213407400|ref|XP_002174471.1| gamma-glutamyltranspeptidase Ggt2 [Schizosaccharomyces japonicus
yFS275]
gi|212002518|gb|EEB08178.1| gamma-glutamyltranspeptidase Ggt2 [Schizosaccharomyces japonicus
yFS275]
Length = 601
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 16/112 (14%), Positives = 34/112 (30%), Gaps = 11/112 (9%)
Query: 74 NDSQERSYLKEIATDYLYTLLSGPPMGDFV------QIKAFGFDNLRKKIKEDLNSRLGS 127
+ ++ I+ D + P D + A I +N GS
Sbjct: 377 DPEHAKAIRANISLDRTFPYEYYQPAFDVAENHGTTHVTAIDSKGFTASITSTVNLEFGS 436
Query: 128 QFISE----VLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEPL 175
+ V DE++ SI R N + ++ + + + + +
Sbjct: 437 HLMDPTTGVVFNDEMDDFSIPGAR-NAFNVSASPWNYVAPGKRPLSSSAPTV 487
>gi|166214646|ref|ZP_02240681.1| DNA polymerase III subunit alpha [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166204168|gb|EDR48648.1| DNA polymerase III subunit alpha [Yersinia pestis biovar Antiqua
str. B42003004]
Length = 949
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
Query: 90 LYTLLSGPPMGDFVQIKAFGFD-NLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD-MR 147
L+ P D F R ++ E LN R G +++ I YL +R
Sbjct: 319 LFERFINPERLDLPD-ADLDFSQARRHEVIEYLNERYGEDYVAG--IPNFTYLGAASALR 375
Query: 148 SNCLRLGSNASDLMTQK 164
G +A+D+ K
Sbjct: 376 DTARIYGVDAADMAVSK 392
>gi|165939425|ref|ZP_02227972.1| DNA polymerase III subunit alpha [Yersinia pestis biovar Orientalis
str. IP275]
gi|167422789|ref|ZP_02314542.1| DNA polymerase III subunit alpha [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167470030|ref|ZP_02334734.1| DNA polymerase III [Yersinia pestis FV-1]
gi|229897817|ref|ZP_04512972.1| DNA polymerase III alpha subunit [Yersinia pestis biovar Orientalis
str. PEXU2]
gi|229900269|ref|ZP_04515404.1| DNA polymerase III alpha subunit [Yersinia pestis biovar Orientalis
str. India 195]
gi|165912613|gb|EDR31243.1| DNA polymerase III subunit alpha [Yersinia pestis biovar Orientalis
str. IP275]
gi|166958282|gb|EDR55303.1| DNA polymerase III subunit alpha [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|229686628|gb|EEO78709.1| DNA polymerase III alpha subunit [Yersinia pestis biovar Orientalis
str. India 195]
gi|229693398|gb|EEO83448.1| DNA polymerase III alpha subunit [Yersinia pestis biovar Orientalis
str. PEXU2]
Length = 1037
Score = 35.7 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
Query: 90 LYTLLSGPPMGDFVQIKAFGFD-NLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD-MR 147
L+ P D F R ++ E LN R G +++ I YL +R
Sbjct: 404 LFERFINPERLDLPD-ADLDFSQARRHEVIEYLNERYGEDYVAG--IPNFTYLGAASALR 460
Query: 148 SNCLRLGSNASDLMTQK 164
G +A+D+ K
Sbjct: 461 DTARIYGVDAADMAVSK 477
>gi|225849154|ref|YP_002729318.1| flagellar basal body-associated protein FliL [Sulfurihydrogenibium
azorense Az-Fu1]
gi|225644683|gb|ACN99733.1| flagellar basal body-associated protein FliL [Sulfurihydrogenibium
azorense Az-Fu1]
Length = 169
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 16/86 (18%), Positives = 33/86 (38%), Gaps = 5/86 (5%)
Query: 56 VSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDN 112
+++ Y V + V D + + D + TLL D + G +
Sbjct: 81 LADKDADRYIKVTIVMEVQDEKVKEEATKRMPQIKDSINTLLFTKTSEDLKSPE--GIER 138
Query: 113 LRKKIKEDLNSRLGSQFISEVLIDEL 138
L+++I +N+ L + + +V E
Sbjct: 139 LKEEIIRRVNAILPTGGVKDVYFTEF 164
>gi|165928515|ref|ZP_02224347.1| DNA polymerase III subunit alpha [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165919449|gb|EDR36805.1| DNA polymerase III subunit alpha [Yersinia pestis biovar Orientalis
str. F1991016]
Length = 569
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
Query: 90 LYTLLSGPPMGDFVQIKAFGFD-NLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD-MR 147
L+ P D F R ++ E LN R G +++ I YL +R
Sbjct: 404 LFERFINPERLDLPD-ADLDFSQARRHEVIEYLNERYGEDYVAG--IPNFTYLGAASALR 460
Query: 148 SNCLRLGSNASDLMTQK 164
G +A+D+ K
Sbjct: 461 DTARIYGVDAADMAVSK 477
>gi|300780038|ref|ZP_07089894.1| conserved hypothetical integral membrane protein [Corynebacterium
genitalium ATCC 33030]
gi|300534148|gb|EFK55207.1| conserved hypothetical integral membrane protein [Corynebacterium
genitalium ATCC 33030]
Length = 234
Score = 35.7 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 18/98 (18%), Positives = 35/98 (35%), Gaps = 12/98 (12%)
Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62
+ +F+G I+V+ ++SFY+ + A+ +P + L
Sbjct: 83 RAVFTGFGIAVLAVVSFYIAIWLPGAPFYDMQDTFEAVLGL---------LPRIVVASLT 133
Query: 63 AYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMG 100
Y + +L +N TD L+ L G +
Sbjct: 134 GYVVGQL---LNAWVLEKMKDRFGTDNLWARLIGSTIV 168
>gi|2996335|gb|AAC13215.1| DNA polymerase III alpha subunit homolog [Yersinia pestis KIM 10]
Length = 1135
Score = 35.7 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
Query: 90 LYTLLSGPPMGDFVQIKAFGFD-NLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD-MR 147
L+ P D F R ++ E LN R G +++ I YL +R
Sbjct: 365 LFERFINPERLDLPD-ADLDFSQARRHEVIEYLNERYGEDYVAG--IPNFTYLGAASALR 421
Query: 148 SNCLRLGSNASDLMTQK 164
G +A+D+ K
Sbjct: 422 DTARIYGVDAADMAVSK 438
>gi|229897023|ref|ZP_04512182.1| DNA polymerase III alpha subunit [Yersinia pestis Pestoides A]
gi|229700059|gb|EEO88099.1| DNA polymerase III alpha subunit [Yersinia pestis Pestoides A]
Length = 905
Score = 35.7 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
Query: 90 LYTLLSGPPMGDFVQIKAFGFD-NLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD-MR 147
L+ P D F R ++ E LN R G +++ I YL +R
Sbjct: 404 LFERFINPERLDLPD-ADLDFSQARRHEVIEYLNERYGEDYVAG--IPNFTYLGAASALR 460
Query: 148 SNCLRLGSNASDLMTQK 164
G +A+D+ K
Sbjct: 461 DTARIYGVDAADMAVSK 477
>gi|18466680|ref|NP_569487.1| putative DNA polymerase III alpha subunit [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
gi|16505996|emb|CAD09882.1| putative DNA polymerase III alpha subunit [Salmonella enterica
subsp. enterica serovar Typhi str. CT18]
Length = 1172
Score = 35.7 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
Query: 90 LYTLLSGPPMGDFVQIKAFGFD-NLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD-MR 147
L+ P D F R ++ E LN R G +++ I YL +R
Sbjct: 404 LFERFINPERLDLPD-ADLDFSQARRHEVIEYLNERYGEDYVAG--IPNFTYLGAASALR 460
Query: 148 SNCLRLGSNASDLMTQK 164
G +A+D+ K
Sbjct: 461 DTARIYGVDAADMAVSK 477
>gi|31795434|ref|NP_857887.1| putative DNA polymerase III alpha subunit [Yersinia pestis KIM]
gi|40787972|ref|NP_857689.2| DNA polymerase III alpha subunit [Yersinia pestis KIM]
gi|52788118|ref|YP_093946.1| putative DNA polymerase III alpha chain [Yersinia pestis]
gi|108793591|ref|YP_636745.1| DNA polymerase III [Yersinia pestis Antiqua]
gi|108793791|ref|YP_636633.1| DNA polymerase III [Yersinia pestis Nepal516]
gi|145597255|ref|YP_001154722.1| DNA polymerase III [Yersinia pestis Pestoides F]
gi|167402528|ref|ZP_02307979.1| DNA polymerase III, alpha subunit [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|229904862|ref|ZP_04519972.1| DNA polymerase III alpha subunit [Yersinia pestis Nepal516]
gi|270491053|ref|ZP_06208126.1| DNA polymerase III, alpha subunit [Yersinia pestis KIM D27]
gi|294502044|ref|YP_003565781.1| DNA polymerase III [Yersinia pestis Z176003]
gi|14194660|sp|O68770|DPO3A_YERPE RecName: Full=DNA polymerase III subunit alpha
gi|3883104|gb|AAC82764.1| putative DNA polymerase III , alpha subunit [Yersinia pestis KIM
10]
gi|52538047|emb|CAG27472.1| putative DNA polymerase III alpha chain [Yersinia pestis]
gi|108777855|gb|ABG20373.1| DNA polymerase III [Yersinia pestis Nepal516]
gi|108782138|gb|ABG16195.1| DNA polymerase III [Yersinia pestis Antiqua]
gi|145213023|gb|ABP42428.1| DNA polymerase III [Yersinia pestis Pestoides F]
gi|167048094|gb|EDR59502.1| DNA polymerase III, alpha subunit [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|229678177|gb|EEO74283.1| DNA polymerase III alpha subunit [Yersinia pestis Nepal516]
gi|262363938|gb|ACY60657.1| DNA polymerase III [Yersinia pestis D106004]
gi|262364096|gb|ACY64432.1| DNA polymerase III [Yersinia pestis D182038]
gi|270335034|gb|EFA45812.1| DNA polymerase III, alpha subunit [Yersinia pestis KIM D27]
gi|294352515|gb|ADE66571.1| DNA polymerase III [Yersinia pestis Z176003]
gi|320017589|gb|ADW01159.1| DNA polymerase III alpha subunit [Yersinia pestis biovar Medievalis
str. Harbin 35]
Length = 1174
Score = 35.7 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
Query: 90 LYTLLSGPPMGDFVQIKAFGFD-NLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD-MR 147
L+ P D F R ++ E LN R G +++ I YL +R
Sbjct: 404 LFERFINPERLDLPD-ADLDFSQARRHEVIEYLNERYGEDYVAG--IPNFTYLGAASALR 460
Query: 148 SNCLRLGSNASDLMTQK 164
G +A+D+ K
Sbjct: 461 DTARIYGVDAADMAVSK 477
>gi|221632404|ref|YP_002521625.1| hypothetical protein trd_0376 [Thermomicrobium roseum DSM 5159]
gi|221155856|gb|ACM04983.1| Domain of unknown function domain protein [Thermomicrobium roseum
DSM 5159]
Length = 137
Score = 35.7 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 30/59 (50%)
Query: 87 TDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD 145
+D L L G + ++ F D++R+++K+ ++ LG ++ LI ++ + D
Sbjct: 14 SDDLARRLFGDSTTEGGEMAKFTEDDVRERLKQVIDPELGVDVVNLGLIYGIDLIDRED 72
>gi|162417899|ref|YP_001604616.1| DNA polymerase III, alpha subunit [Yersinia pestis Angola]
gi|162350871|gb|ABX84820.1| DNA polymerase III, alpha subunit [Yersinia pestis Angola]
Length = 1174
Score = 35.7 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 28/77 (36%), Gaps = 5/77 (6%)
Query: 90 LYTLLSGPPMGDFVQIKAFGFD-NLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD-MR 147
L+ P D F R ++ E LN R G +++ I YL +R
Sbjct: 404 LFERFINPERLDLPD-ADLDFSQARRHEVIEYLNERYGEDYVAG--IPNFTYLGAASALR 460
Query: 148 SNCLRLGSNASDLMTQK 164
G +A+D+ K
Sbjct: 461 DTARIYGVDAADMAVSK 477
>gi|298207031|ref|YP_003715210.1| glycerol-3-phosphate dehydrogenase [Croceibacter atlanticus
HTCC2559]
gi|83849665|gb|EAP87533.1| glycerol-3-phosphate dehydrogenase [Croceibacter atlanticus
HTCC2559]
Length = 334
Score = 35.7 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 40 IKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPP 98
I +KS + + V+ Y+ K ++ +N +++ K D +Y++L
Sbjct: 266 IGKGYTVKSAQMEMSMVAE----GYYAAKSAYTINQDKKKKRAKTPIIDAVYSILYENK 320
>gi|254172054|ref|ZP_04878730.1| GTP-binding protein [Thermococcus sp. AM4]
gi|214033950|gb|EEB74776.1| GTP-binding protein [Thermococcus sp. AM4]
Length = 397
Score = 35.7 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 28/82 (34%), Gaps = 9/82 (10%)
Query: 55 SVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114
+ G + Y +V S + ++ P DF +K +
Sbjct: 235 LIEEGKKRGYIVVPTSAAAELTLRKAAKAGFIE-------YIPGSSDFKIVKKMNPKQEK 287
Query: 115 --KKIKEDLNSRLGSQFISEVL 134
+ IKE + R GS + EV+
Sbjct: 288 ALQLIKEKVLDRFGSTGVQEVI 309
>gi|148265788|ref|YP_001232494.1| hypothetical protein Gura_3768 [Geobacter uraniireducens Rf4]
gi|146399288|gb|ABQ27921.1| hypothetical protein Gura_3768 [Geobacter uraniireducens Rf4]
Length = 152
Score = 35.7 bits (81), Expect = 2.8, Method: Composition-based stats.
Identities = 10/65 (15%), Positives = 23/65 (35%), Gaps = 11/65 (16%)
Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLI 168
L+K+I LN RLG + + ++ +R+ + +K +
Sbjct: 67 QLSYLKKQIIAKLNKRLGEELVKDIF-----------LRAGSREESVPQPTALRKKARPL 115
Query: 169 EKNKE 173
++
Sbjct: 116 SSEEK 120
>gi|186684076|ref|YP_001867272.1| hypothetical protein Npun_F3948 [Nostoc punctiforme PCC 73102]
gi|186466528|gb|ACC82329.1| conserved hypothetical protein [Nostoc punctiforme PCC 73102]
Length = 448
Score = 35.3 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 11/83 (13%), Positives = 30/83 (36%), Gaps = 8/83 (9%)
Query: 59 GVLQAYFLVKLS-FIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117
G + + + + F V + + + ++ + D G + D F ++
Sbjct: 371 GRITG--MTRYACFWVENGEIIAPIENLRFDESLYRFWGENLVDLTN-----FQEFIPEV 423
Query: 118 KEDLNSRLGSQFISEVLIDELNY 140
+ +LG + +L++ Y
Sbjct: 424 GTYDSRQLGGSLVPGMLVENFTY 446
>gi|221128320|ref|XP_002159930.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
Length = 437
Score = 35.3 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 102 FVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYL 141
F I + + K ++ +N R S + VLI +L
Sbjct: 191 FNTITSHSGNAFTKALRSYINLRFNSSVVHNVLIAYFPFL 230
>gi|57233503|gb|AAW48302.1| potato resistance-like protein I2GA-SH194-2 [Solanum tuberosum]
Length = 1286
Score = 35.3 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 41/122 (33%), Gaps = 11/122 (9%)
Query: 53 IPSVSNGVLQAYFLVKLSFIVNDSQERSYLKE-IATDYLYTLLSGPPMGDFVQIKAFGFD 111
+P V G L L K + Q+ LK Y L +I +F
Sbjct: 204 VPIVGMGGLGKTILAKAVYNDERVQKHFGLKAWFCVSEAYDALRITKGL-LQEIDSFDLK 262
Query: 112 ------NLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKG 165
L+ ++KE LN + + +V D NY D+R N G S ++
Sbjct: 263 VDDNLNQLQVRLKEKLNGKRFLVVLDDVWND--NYPEWDDLR-NLFLQGDIGSKIIVTTR 319
Query: 166 SL 167
Sbjct: 320 KE 321
>gi|167647004|ref|YP_001684667.1| hypothetical protein Caul_3042 [Caulobacter sp. K31]
gi|167349434|gb|ABZ72169.1| conserved hypothetical protein [Caulobacter sp. K31]
Length = 174
Score = 35.3 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 20/153 (13%), Positives = 49/153 (32%), Gaps = 17/153 (11%)
Query: 28 DTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KE 84
+ +IK + +++P + +G L Y ++ S + + +
Sbjct: 29 SPKKKGKEGEAEAAPDPVIKLQSMALPVIVDGRLVNYVFLQSSITLKPGVLVTIFEGKEP 88
Query: 85 IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEV-LIDEL--NYL 141
I D + P A L+ I N+ +G ++ V +I + N++
Sbjct: 89 ILRDAIVREAHTKPFTRPDSYAALDEGRLKASILRQANALIGPGKVAMVTIIKQTPRNFV 148
Query: 142 SIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174
+K + +++ +P
Sbjct: 149 PP-----------PKPGTQGAKKPAPVQQRGDP 170
>gi|222153669|ref|YP_002562846.1| DNA mismatch repair protein [Streptococcus uberis 0140J]
gi|254766604|sp|B9DVK7|MUTS2_STRU0 RecName: Full=MutS2 protein
gi|222114482|emb|CAR43343.1| putative DNA mismatch repair protein [Streptococcus uberis 0140J]
Length = 777
Score = 35.3 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 10/75 (13%)
Query: 73 VNDSQERSYLKEIATDYLYTLLSGPPMG--DFVQIKAF---GFDNLRKKIKEDLNSRLGS 127
V+ + ++I ++ L G D I+ F D LR++I E N R
Sbjct: 112 VDLQVLKRIFEKI---EVFPQLQGSLQAVNDAAFIENFASPELDRLRRQIAE--NERYSR 166
Query: 128 QFISEVLIDELNYLS 142
Q + ++L +YLS
Sbjct: 167 QLLQDILKKNADYLS 181
>gi|227532828|ref|ZP_03962877.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
gi|227189532|gb|EEI69599.1| ABC superfamily ATP binding cassette transporter, membrane protein
[Lactobacillus paracasei subsp. paracasei ATCC 25302]
Length = 310
Score = 35.3 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 7/58 (12%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKN-TNIIKSELVSIPSVS 57
M+ + + +W+ L +++ L + ++ + I + ++ +++P +S
Sbjct: 174 MIVIVLASVWM---ALGFAFLILLSAFQSVPPEYYEVADIAGWSQYKQTLKITVPMIS 228
>gi|239630635|ref|ZP_04673666.1| ABC-type sugar transport system protein [Lactobacillus paracasei
subsp. paracasei 8700:2]
gi|239526918|gb|EEQ65919.1| ABC-type sugar transport system protein [Lactobacillus paracasei
subsp. paracasei 8700:2]
Length = 310
Score = 35.3 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 7/58 (12%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKN-TNIIKSELVSIPSVS 57
M+ + + +W+ L +++ L + ++ + I + ++ +++P +S
Sbjct: 174 MIVIVLASVWM---ALGFAFLILLSAFQSVPPEYYEVADIAGWSQYKQTLKITVPMIS 228
>gi|191639707|ref|YP_001988873.1| Binding-protein-dependent transport systems inner membrane
component [Lactobacillus casei BL23]
gi|190714009|emb|CAQ68015.1| Binding-protein-dependent transport systems inner membrane
component [Lactobacillus casei BL23]
gi|327383821|gb|AEA55297.1| sn-glycerol-3-phosphate ABC transporter, periplasmic
glycerol-3-phosphate-binding protein [Lactobacillus
casei LC2W]
gi|327387000|gb|AEA58474.1| sn-glycerol-3-phosphate ABC transporter, periplasmic
glycerol-3-phosphate-binding protein [Lactobacillus
casei BD-II]
Length = 310
Score = 35.3 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 7/58 (12%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKN-TNIIKSELVSIPSVS 57
M+ + + +W+ L +++ L + ++ + I + ++ +++P +S
Sbjct: 174 MIVIVLASVWM---ALGFAFLILLSAFQSVPPEYYEVADIAGWSQYKQTLKITVPMIS 228
>gi|116496186|ref|YP_807920.1| ABC-type sugar transport system, permease component [Lactobacillus
casei ATCC 334]
gi|301067789|ref|YP_003789812.1| sugar ABC transporter permease [Lactobacillus casei str. Zhang]
gi|116106336|gb|ABJ71478.1| carbohydrate ABC transporter membrane protein 1, CUT1 family
[Lactobacillus casei ATCC 334]
gi|300440196|gb|ADK19962.1| ABC-type sugar transport system, permease component [Lactobacillus
casei str. Zhang]
Length = 310
Score = 35.3 bits (80), Expect = 3.6, Method: Composition-based stats.
Identities = 7/58 (12%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKN-TNIIKSELVSIPSVS 57
M+ + + +W+ L +++ L + ++ + I + ++ +++P +S
Sbjct: 174 MIVIVLASVWM---ALGFAFLILLSAFQSVPPEYYEVADIAGWSQYKQTLKITVPMIS 228
>gi|217969333|ref|YP_002354567.1| binding-protein-dependent transporters inner membrane component
[Thauera sp. MZ1T]
gi|217506660|gb|ACK53671.1| binding-protein-dependent transport systems inner membrane
component [Thauera sp. MZ1T]
Length = 273
Score = 35.3 bits (80), Expect = 3.8, Method: Composition-based stats.
Identities = 11/82 (13%), Positives = 33/82 (40%), Gaps = 4/82 (4%)
Query: 6 FSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSE---LVSIPSVSNGVLQ 62
+ IW++ TL + Y+ L + + A + + ++++P ++ +
Sbjct: 134 VAAIWVAHTTLCAAYVAVLVASRLREMDRALEEAALDLGCPPLKVFFVITVPVIAPALAA 193
Query: 63 AYFLVKLSFIVNDSQERSYLKE 84
+ L + ++D + L +
Sbjct: 194 GWLLA-FTLSMDDFVLAAMLSD 214
>gi|291564025|emb|CBL42841.1| acetolactate synthase, large subunit [butyrate-producing bacterium
SS3/4]
Length = 540
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 54/160 (33%), Gaps = 8/160 (5%)
Query: 17 ISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS-NGVLQAYFLVKLSFIVND 75
S Y R V + P T + + SIP ++ G + + L + F +
Sbjct: 55 ASGYARISRKAAVCVTSSGPGATNLITALATAYADSIPLIAITGQVNSNLLGRDVF--QE 112
Query: 76 SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLI 135
+ R + Y+ L D +I F K + + ++L
Sbjct: 113 ADMRGSTESFVK---YSYLVKSAD-DIPRIFKEAFYIASTGRKGPVLIDIPCDVQMDLLK 168
Query: 136 DELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEPL 175
+Y S V++R + M + + I K K+PL
Sbjct: 169 KSFDYTSEVNIRG-YKPSTKGNNPQMHKVVAAINKAKKPL 207
>gi|302888491|ref|XP_003043132.1| hypothetical protein NECHADRAFT_51443 [Nectria haematococca mpVI
77-13-4]
gi|256724047|gb|EEU37419.1| hypothetical protein NECHADRAFT_51443 [Nectria haematococca mpVI
77-13-4]
Length = 542
Score = 34.9 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Query: 7 SGIWISVVTLIS----FYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSV 56
G+W S V L S + F + + P + +++++P +
Sbjct: 434 VGVWGSWVALASYGMVLVLQFWVAASPIPLEDGEPSTQERVKTFFMQVLTVPII 487
>gi|312079658|ref|XP_003142269.1| tRNA-dihydrouridine synthase 4 [Loa loa]
gi|307762565|gb|EFO21799.1| tRNA-dihydrouridine synthase 4 [Loa loa]
Length = 333
Score = 34.9 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 21 MLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAY 64
+ F+ E P + +IKS +SIP ++NG +++Y
Sbjct: 183 VSFITVHGRTPEQRSEPADYEMIKLIKS-SLSIPVIANGNIKSY 225
>gi|317155132|ref|XP_001824936.2| MFS monosaccharide transporter [Aspergillus oryzae RIB40]
Length = 545
Score = 34.9 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 9/67 (13%)
Query: 12 SVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNI---IKSELVSIPSVSNGVLQA----- 63
V L F+ + + M V N L + I + ++P V++ +LQ
Sbjct: 25 CVAALAIFFFGYDQGMMGGVNNSSDYLELMGIGYGANINGDT-NVPVVTDSLLQGGIVSV 83
Query: 64 YFLVKLS 70
Y+L L
Sbjct: 84 YYLGTLV 90
>gi|238504834|ref|XP_002383646.1| hexose carrier protein, putative [Aspergillus flavus NRRL3357]
gi|220689760|gb|EED46110.1| hexose carrier protein, putative [Aspergillus flavus NRRL3357]
Length = 545
Score = 34.9 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 9/67 (13%)
Query: 12 SVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNI---IKSELVSIPSVSNGVLQA----- 63
V L F+ + + M V N L + I + ++P V++ +LQ
Sbjct: 25 CVAALAIFFFGYDQGMMGGVNNSSDYLELMGIGYGANINGDT-NVPVVTDSLLQGGIVSV 83
Query: 64 YFLVKLS 70
Y+L L
Sbjct: 84 YYLGTLV 90
>gi|83773676|dbj|BAE63803.1| unnamed protein product [Aspergillus oryzae]
Length = 546
Score = 34.9 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 26/67 (38%), Gaps = 9/67 (13%)
Query: 12 SVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNI---IKSELVSIPSVSNGVLQA----- 63
V L F+ + + M V N L + I + ++P V++ +LQ
Sbjct: 25 CVAALAIFFFGYDQGMMGGVNNSSDYLELMGIGYGANINGDT-NVPVVTDSLLQGGIVSV 83
Query: 64 YFLVKLS 70
Y+L L
Sbjct: 84 YYLGTLV 90
>gi|15219429|ref|NP_177471.1| scpl3 (serine carboxypeptidase-like 3); serine-type
carboxypeptidase [Arabidopsis thaliana]
gi|75169954|sp|Q9CAU1|SCP3_ARATH RecName: Full=Serine carboxypeptidase-like 3; Flags: Precursor
gi|12324329|gb|AAG52138.1|AC010556_20 putative serine carboxypeptidase; 12385-14737 [Arabidopsis
thaliana]
gi|332197316|gb|AEE35437.1| serine carboxypeptidase-like 3 [Arabidopsis thaliana]
Length = 441
Score = 34.9 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 13/73 (17%), Positives = 25/73 (34%), Gaps = 8/73 (10%)
Query: 37 PLAIKNTNIIKSELVSIPSVSNGVLQAYFL----VKLSFIVNDSQERSYLKEIATDYLYT 92
P ++ + E + P LQ Y L + N ++ + +D L+
Sbjct: 191 PATVQEISKGNYECCNPPI----NLQGYVLGNPLTDFVYDYNSRIPFAHGMALISDELFE 246
Query: 93 LLSGPPMGDFVQI 105
L GD+ +
Sbjct: 247 SLKKTCKGDYRNV 259
>gi|163733146|ref|ZP_02140590.1| hypothetical protein RLO149_10810 [Roseobacter litoralis Och 149]
gi|161393681|gb|EDQ18006.1| hypothetical protein RLO149_10810 [Roseobacter litoralis Och 149]
Length = 166
Score = 34.9 bits (79), Expect = 4.7, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 43/122 (35%), Gaps = 16/122 (13%)
Query: 25 RSMDTMVENHVPPLAIKNTNIIK-SELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY-- 81
S T E L I +K S +P V + + ++ LS + Q ++
Sbjct: 42 SSETTAKEEAKDELPIAGKEYVKLSNQFVVPIVEKDRVSSMIVMTLSVEAPEGQGQAVYD 101
Query: 82 LKEIATDYLYTLLSGPPMGDFVQIKAF--------GFDNLRKKIKEDLNSRLGSQFISEV 133
L+ D +L D I F D +R+ +++ G IS+V
Sbjct: 102 LEPKIRDVFLRILF-----DHAAIGGFRGAFLNNENLDIVRRNLRDGAIKTFGKDLISDV 156
Query: 134 LI 135
LI
Sbjct: 157 LI 158
>gi|29346153|ref|NP_809656.1| penicillin-binding protein 1A [Bacteroides thetaiotaomicron
VPI-5482]
gi|29338048|gb|AAO75850.1| penicillin-binding protein 1A (PBP-1a) [Bacteroides
thetaiotaomicron VPI-5482]
Length = 779
Score = 34.9 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 42/122 (34%), Gaps = 12/122 (9%)
Query: 1 MLKFLFSGIWI-SVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNII-KSELVSIPSVSN 58
M++ + + +W+ V LI+ ++F+ + P ++N N +E+ S +
Sbjct: 1 MIRKIINALWVLLAVALIAIVVVFVSISKGWIGYMPPVEELENPNYKFATEVFS----ED 56
Query: 59 GVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118
G + +F + + + + L F + L + I
Sbjct: 57 GKVLG------TFSMEKNNRVYSSYADLSPNIIHALIATEDVRFAEHSGIDAKALFRAIV 110
Query: 119 ED 120
+
Sbjct: 111 KR 112
>gi|298385517|ref|ZP_06995075.1| penicillin-binding protein 1A [Bacteroides sp. 1_1_14]
gi|298261658|gb|EFI04524.1| penicillin-binding protein 1A [Bacteroides sp. 1_1_14]
Length = 779
Score = 34.9 bits (79), Expect = 4.8, Method: Composition-based stats.
Identities = 17/122 (13%), Positives = 42/122 (34%), Gaps = 12/122 (9%)
Query: 1 MLKFLFSGIWI-SVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNII-KSELVSIPSVSN 58
M++ + + +W+ V LI+ ++F+ + P ++N N +E+ S +
Sbjct: 1 MIRKIINALWVLLAVALIAIVVVFVSISKGWIGYMPPVEELENPNYKFATEVFS----ED 56
Query: 59 GVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118
G + +F + + + + L F + L + I
Sbjct: 57 GKVLG------TFSMEKNNRVYSSYADLSPNIIHALIATEDVRFAEHSGIDAKALFRAIV 110
Query: 119 ED 120
+
Sbjct: 111 KR 112
>gi|295133763|ref|YP_003584439.1| integral membrane sensor signal transduction histidine kinase
[Zunongwangia profunda SM-A87]
gi|294981778|gb|ADF52243.1| integral membrane sensor signal transduction histidine kinase
[Zunongwangia profunda SM-A87]
Length = 459
Score = 34.5 bits (78), Expect = 6.1, Method: Composition-based stats.
Identities = 17/91 (18%), Positives = 29/91 (31%), Gaps = 5/91 (5%)
Query: 51 VSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDY---LYTLLSGPPMGDFVQIKA 107
+ +P NG + Y + +SF + + Y L L IK
Sbjct: 131 IQVPVKMNGKVYGYIITAMSFEASQDVIVRLAWILILCYPLILIVLFFISRFLAGRSIKP 190
Query: 108 FG-FDNLRKKI-KEDLNSRLGSQFISEVLID 136
+I ++ LN R+ + L D
Sbjct: 191 IQEITQTTNRISRDHLNERVKFPDNKDELYD 221
>gi|332799186|ref|YP_004460685.1| flagellar basal body-associated protein FliL [Tepidanaerobacter sp.
Re1]
gi|332696921|gb|AEE91378.1| flagellar basal body-associated protein FliL [Tepidanaerobacter sp.
Re1]
Length = 152
Score = 34.5 bits (78), Expect = 6.4, Method: Composition-based stats.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 62 QAYFLVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118
+ Y + L +++N E + D ++ +L + G +NLRKKIK
Sbjct: 72 KGYIRLSLVYLLNSKDVENELKLKESEIRDKIFVILRSETYDSIKDSE--GMENLRKKIK 129
Query: 119 EDLNSRLGSQFISEV 133
E LN L + I +V
Sbjct: 130 ESLNQILTNGSIVDV 144
>gi|57640441|ref|YP_182919.1| translation-associated GTPase [Thermococcus kodakarensis KOD1]
gi|57158765|dbj|BAD84695.1| predicted GTPase, containing TGS domain [Thermococcus kodakarensis
KOD1]
Length = 397
Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 16/106 (15%), Positives = 32/106 (30%), Gaps = 18/106 (16%)
Query: 31 VENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYL 90
N + + +K G + Y ++ S + ++
Sbjct: 220 AANKADAASDEQLERLK---------KEGEKRGYIVIPTSAAAELTLRKAAKAGFID--- 267
Query: 91 YTLLSGPPMGDFVQIKAFGFDNLR--KKIKEDLNSRLGSQFISEVL 134
P DF +K + + I+E + R GS + EV+
Sbjct: 268 ----YVPGSSDFKVLKKLSPKQEKALELIREKVLQRFGSTGVQEVI 309
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.311 0.146 0.413
Lambda K H
0.267 0.0444 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,127,901,169
Number of Sequences: 14124377
Number of extensions: 116884581
Number of successful extensions: 352298
Number of sequences better than 10.0: 157
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 119
Number of HSP's that attempted gapping in prelim test: 351941
Number of HSP's gapped (non-prelim): 244
length of query: 176
length of database: 4,842,793,630
effective HSP length: 129
effective length of query: 47
effective length of database: 3,020,748,997
effective search space: 141975202859
effective search space used: 141975202859
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 76 (33.8 bits)