BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for composition-based statistics: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780507|ref|YP_003064920.1| hypothetical protein CLIBASIA_01970 [Candidatus Liberibacter asiaticus str. psy62] (176 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done >gi|13472618|ref|NP_104185.1| hypothetical protein mlr2967 [Mesorhizobium loti MAFF303099] gi|14023364|dbj|BAB49971.1| mlr2967 [Mesorhizobium loti MAFF303099] Length = 178 Score = 174 bits (441), Expect = 4e-42, Method: Composition-based stats. Identities = 44/177 (24%), Positives = 86/177 (48%), Gaps = 4/177 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K + +W+ TL + + F + + V P+ + + +K++++S+P + + Sbjct: 1 MIKIIAIAVWVCAATLGAVFYSFQAAGERGVGEKPKPM-LGGLDYVKTDVISVPLIRDSK 59 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + YFL KL + V Q + + TD +Y+ L P DF + D R I Sbjct: 60 IGGYFLAKLVYTVEPEQIKKLSIPAEALITDQVYSYLYANPQIDFTKKATIDLDAFRAAI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174 ++ +N+R+G+ + EVL+D++N+LS ++R N LR ++ E + P Sbjct: 120 RDTVNTRVGANLVHEVLVDQVNFLSKDEIRDNWLRRRQDSDTAAAGTAKPAEADAPP 176 >gi|163758044|ref|ZP_02165132.1| hypothetical protein HPDFL43_00425 [Hoeflea phototrophica DFL-43] gi|162284333|gb|EDQ34616.1| hypothetical protein HPDFL43_00425 [Hoeflea phototrophica DFL-43] Length = 185 Score = 162 bits (410), Expect = 2e-38, Method: Composition-based stats. Identities = 54/177 (30%), Positives = 90/177 (50%), Gaps = 8/177 (4%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K L +G+WISVV L S Y + T + P I+ ++ SIP +S G Sbjct: 1 MIKLLITGVWISVVALASVYFSVQMAN-TPEDEEPVPALFGGLETIRGDVTSIPVISGGR 59 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + YFL +LS+ ++ S+ + TD LYT L G + DF +K F + + I Sbjct: 60 VTGYFLTRLSYTIDPSKAALMTIPVKDLVTDALYTSLVGDNLIDFPNMKRFDLEGFKAHI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174 ++ +N RLG + +VL+++++YLS D+RSN +L ++G + +P Sbjct: 120 RDSINERLGDKVFHDVLVEQIDYLSKEDIRSNM----GGGGNLNIKEGDPVGSEGKP 172 >gi|222084897|ref|YP_002543426.1| hypothetical protein Arad_0927 [Agrobacterium radiobacter K84] gi|221722345|gb|ACM25501.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 178 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 47/177 (26%), Positives = 88/177 (49%), Gaps = 6/177 (3%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K + +G+W+ VVTL S Y + A + +K E +++P ++NG Sbjct: 1 MIKLVLTGLWVCVVTLASVYFSVQTATAPATSPDDAKKAQQ--EFVKGEAINVPVIANGQ 58 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIA---TDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + YFL ++SF+++ + + +A TD LY+LL G D ++ F R +I Sbjct: 59 VTGYFLTRISFMMDKGKASALQPPLAALTTDELYSLLVGNKAIDIAHVETFNVAAFRDEI 118 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174 K+ +N RLG ++ +VL+++L+YLS ++ + A + +G + P Sbjct: 119 KKSMNERLGGDYVGDVLVEQLDYLSKNEIGNGEGSGKRTAKPVKIVQGD-SASDAPP 174 >gi|153011496|ref|YP_001372710.1| hypothetical protein Oant_4181 [Ochrobactrum anthropi ATCC 49188] gi|151563384|gb|ABS16881.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188] Length = 179 Score = 162 bits (409), Expect = 2e-38, Method: Composition-based stats. Identities = 38/178 (21%), Positives = 85/178 (47%), Gaps = 6/178 (3%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M++ + G+WI V S ++ +++ + E + +K++++S+P +SNG Sbjct: 1 MIRIIAIGLWICAVAFGSLFLAVRQNVSSSGEAQAATSGFGGVDYVKTDVMSVPIISNGG 60 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + Y + +L + V+ + + D ++ G D +++ F+++R I Sbjct: 61 VAGYVVTQLVYTVDSNIRKKLTVPLEFFINDEIFRKFYG-SYSDTKEVEKVSFEDVRASI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEPL 175 DLN+R I ++L+++ NY+S ++R+ +R + K S + N EP+ Sbjct: 120 ITDLNARFPEPVIKDLLVEQFNYISAEEIRAMNMR--GTPTPTAPAKQSEKQANAEPV 175 >gi|254780507|ref|YP_003064920.1| hypothetical protein CLIBASIA_01970 [Candidatus Liberibacter asiaticus str. psy62] gi|254040184|gb|ACT56980.1| hypothetical protein CLIBASIA_01970 [Candidatus Liberibacter asiaticus str. psy62] Length = 176 Score = 161 bits (407), Expect = 4e-38, Method: Composition-based stats. Identities = 176/176 (100%), Positives = 176/176 (100%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV Sbjct: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED Sbjct: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 Query: 121 LNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEPLK 176 LNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEPLK Sbjct: 121 LNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEPLK 176 >gi|227820887|ref|YP_002824857.1| hypothetical protein NGR_c03060 [Sinorhizobium fredii NGR234] gi|227339886|gb|ACP24104.1| hypothetical protein NGR_c03060 [Sinorhizobium fredii NGR234] Length = 188 Score = 160 bits (406), Expect = 5e-38, Method: Composition-based stats. Identities = 48/180 (26%), Positives = 82/180 (45%), Gaps = 8/180 (4%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 MLK + +G+W+ VTL S Y + +V + + E++++P + G Sbjct: 1 MLKLVLTGVWVCAVTLGSVYFSMQYASAPIVSDAEADRRASE-EYVPGEIITVPVIEEGA 59 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 +Q YFL KLSF + TD LY +L G D F + + + Sbjct: 60 VQGYFLAKLSFSATREGIAKLHAPLRQVVTDELYDMLVGSRFVDVADTGTFDLPSFKVAV 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMR---SNCLRLGSNASDLMTQKGSLIEKNKEP 174 K+ LN +LG + I+EVL+++L YL DM+ + R ++ + G+ + +K P Sbjct: 120 KDGLNKKLGGEVITEVLVEQLEYLGKDDMKRVANGNNRPYQEPVPVVDKHGN-VASDKIP 178 >gi|260466576|ref|ZP_05812764.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] gi|259029582|gb|EEW30870.1| conserved hypothetical protein [Mesorhizobium opportunistum WSM2075] Length = 171 Score = 160 bits (404), Expect = 8e-38, Method: Composition-based stats. Identities = 46/157 (29%), Positives = 81/157 (51%), Gaps = 4/157 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K + +WI TL + + F + + V P+ + + +K++++S+P + N Sbjct: 1 MIKVIAIAVWICAATLGAVFYSFQAAGEKGVGETPKPM-LGGLDYVKTDIISVPLIHNAS 59 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + YFL KL + V Q + + TD +YT L P DF + D R I Sbjct: 60 IDGYFLTKLVYTVEPEQIKKLSIPADALITDQVYTYLYSNPQIDFTNKQTIDLDAFRAAI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLG 154 ++ +N+R+G+ + EVLID++N+LS ++R N LR Sbjct: 120 RDTINTRVGANLVHEVLIDQVNFLSKDEIRDNWLRRK 156 >gi|23500842|ref|NP_700282.1| hypothetical protein BRA1127 [Brucella suis 1330] gi|62317946|ref|YP_223799.1| hypothetical protein BruAb2_1064 [Brucella abortus bv. 1 str. 9-941] gi|83269923|ref|YP_419214.1| hypothetical protein BAB2_1084 [Brucella melitensis biovar Abortus 2308] gi|161621170|ref|YP_001595056.1| hypothetical protein BCAN_B1156 [Brucella canis ATCC 23365] gi|163845446|ref|YP_001623101.1| hypothetical protein BSUIS_B1354 [Brucella suis ATCC 23445] gi|225628417|ref|ZP_03786451.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|237817491|ref|ZP_04596482.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|254691624|ref|ZP_05154878.1| hypothetical protein Babob68_16097 [Brucella abortus bv. 6 str. 870] gi|254695080|ref|ZP_05156908.1| hypothetical protein Babob3T_10588 [Brucella abortus bv. 3 str. Tulya] gi|254698177|ref|ZP_05160005.1| hypothetical protein Babob28_10820 [Brucella abortus bv. 2 str. 86/8/59] gi|254702371|ref|ZP_05164199.1| hypothetical protein Bsuib36_00065 [Brucella suis bv. 3 str. 686] gi|254706508|ref|ZP_05168336.1| hypothetical protein BpinM_05862 [Brucella pinnipedialis M163/99/10] gi|254711207|ref|ZP_05173018.1| hypothetical protein BpinB_13290 [Brucella pinnipedialis B2/94] gi|254711808|ref|ZP_05173619.1| hypothetical protein BcetM6_00050 [Brucella ceti M644/93/1] gi|254714876|ref|ZP_05176687.1| hypothetical protein BcetM_00050 [Brucella ceti M13/05/1] gi|254731622|ref|ZP_05190200.1| hypothetical protein Babob42_10630 [Brucella abortus bv. 4 str. 292] gi|256015886|ref|YP_003105895.1| hypothetical protein BMI_II1133 [Brucella microti CCM 4915] gi|256030164|ref|ZP_05443778.1| hypothetical protein BpinM2_05870 [Brucella pinnipedialis M292/94/1] gi|256112188|ref|ZP_05453109.1| hypothetical protein Bmelb3E_05802 [Brucella melitensis bv. 3 str. Ether] gi|256158343|ref|ZP_05456247.1| hypothetical protein BcetM4_05802 [Brucella ceti M490/95/1] gi|256252723|ref|ZP_05458259.1| hypothetical protein BcetB_00080 [Brucella ceti B1/94] gi|256256811|ref|ZP_05462347.1| hypothetical protein Babob9C_05525 [Brucella abortus bv. 9 str. C68] gi|260544130|ref|ZP_05819951.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260568726|ref|ZP_05839195.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|260757254|ref|ZP_05869602.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260759381|ref|ZP_05871729.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260762624|ref|ZP_05874956.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260883058|ref|ZP_05894672.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|261215432|ref|ZP_05929713.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|261216564|ref|ZP_05930845.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261219801|ref|ZP_05934082.1| conserved hypothetical protein [Brucella ceti B1/94] gi|261313963|ref|ZP_05953160.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261318798|ref|ZP_05957995.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261319435|ref|ZP_05958632.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261752934|ref|ZP_05996643.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|265987195|ref|ZP_06099752.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|265993615|ref|ZP_06106172.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|265996858|ref|ZP_06109415.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|294852956|ref|ZP_06793628.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026] gi|297250162|ref|ZP_06933863.1| hypothetical protein BAYG_02950 [Brucella abortus bv. 5 str. B3196] gi|23464505|gb|AAN34287.1| conserved hypothetical protein [Brucella suis 1330] gi|62198139|gb|AAX76438.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] gi|82940197|emb|CAJ13250.1| conserved hypothetical protein [Brucella melitensis biovar Abortus 2308] gi|161337981|gb|ABX64285.1| Hypothetical protein BCAN_B1156 [Brucella canis ATCC 23365] gi|163676169|gb|ABY40279.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|225616263|gb|EEH13311.1| Hypothetical protein, conserved [Brucella ceti str. Cudo] gi|237787326|gb|EEP61543.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A] gi|255998546|gb|ACU50233.1| hypothetical protein BMI_II1133 [Brucella microti CCM 4915] gi|260097401|gb|EEW81275.1| conserved hypothetical protein [Brucella abortus NCTC 8038] gi|260155391|gb|EEW90472.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40] gi|260669699|gb|EEX56639.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292] gi|260673045|gb|EEX59866.1| conserved hypothetical protein [Brucella abortus bv. 2 str. 86/8/59] gi|260677362|gb|EEX64183.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870] gi|260872586|gb|EEX79655.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68] gi|260917039|gb|EEX83900.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya] gi|260918385|gb|EEX85038.1| conserved hypothetical protein [Brucella ceti B1/94] gi|260921653|gb|EEX88221.1| conserved hypothetical protein [Brucella ceti M13/05/1] gi|261292125|gb|EEX95621.1| conserved hypothetical protein [Brucella ceti M644/93/1] gi|261298021|gb|EEY01518.1| conserved hypothetical protein [Brucella pinnipedialis B2/94] gi|261302989|gb|EEY06486.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10] gi|261742687|gb|EEY30613.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686] gi|262551155|gb|EEZ07316.1| conserved hypothetical protein [Brucella ceti M490/95/1] gi|262764485|gb|EEZ10517.1| conserved hypothetical protein [Brucella melitensis bv. 3 str. Ether] gi|264659392|gb|EEZ29653.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1] gi|294818611|gb|EFG35611.1| conserved hypothetical protein [Brucella sp. NVSL 07-0026] gi|297174031|gb|EFH33395.1| hypothetical protein BAYG_02950 [Brucella abortus bv. 5 str. B3196] gi|326411290|gb|ADZ68354.1| conserved hypothetical protein [Brucella melitensis M28] gi|326554579|gb|ADZ89218.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 175 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 10/177 (5%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M++ + G+WI V L S ++ R + P + +K++++S+P +SNG Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAAVEAGPGGFGGVDYVKTDVMSVPIISNGA 60 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + Y + +L + V+ + + +D ++ G D ++ F+++R I Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174 DLN+R I ++L+++ NY+S ++R+ +R + G + + EP Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPG------GRNRKADAEP 170 >gi|306845407|ref|ZP_07477981.1| Hypothetical protein BIBO1_2095 [Brucella sp. BO1] gi|306274150|gb|EFM55966.1| Hypothetical protein BIBO1_2095 [Brucella sp. BO1] Length = 175 Score = 159 bits (403), Expect = 1e-37, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 10/177 (5%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M++ + G+WI V L S ++ R + P + +K++++S+P +SNG Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAAVKAGPGGFGGVDYVKTDVMSVPIISNGA 60 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + Y + +L + V+ + + +D ++ G D ++ F+++R I Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174 DLN+R I ++L+++ NY+S ++R+ +R + G + + EP Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPG------GRNRKADAEP 170 >gi|319781643|ref|YP_004141119.1| hypothetical protein Mesci_1916 [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167531|gb|ADV11069.1| hypothetical protein Mesci_1916 [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 171 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 44/157 (28%), Positives = 80/157 (50%), Gaps = 4/157 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K + +WI TL + + F + + V P+ + + +K++++S+P + + Sbjct: 1 MIKVIAIAVWICAATLGAVFYSFQAAGERGVGETPKPM-LGGLDYVKTDIISVPLIRDSE 59 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + YFL KL + V Q + + TD +Y+ L P DF D R I Sbjct: 60 IGGYFLTKLVYTVEPEQIKKLSIPAEALITDQVYSYLYSNPQIDFTNKATIDLDAFRAAI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLG 154 ++ +N+R+G+ + EVLID++N+LS ++R N LR Sbjct: 120 RDTVNTRVGAPLVHEVLIDQVNFLSKDEIRDNWLRRK 156 >gi|148557849|ref|YP_001257992.1| hypothetical protein BOV_A1031 [Brucella ovis ATCC 25840] gi|148369134|gb|ABQ62006.1| conserved hypothetical protein [Brucella ovis ATCC 25840] Length = 175 Score = 159 bits (402), Expect = 1e-37, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 10/177 (5%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M++ + G+WI V L S ++ R + P + +K++++S+P +SNG Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAAVEAGPDGFGGVDYVKTDVMSVPIISNGA 60 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + Y + +L + V+ + + +D ++ G D ++ F+++R I Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174 DLN+R I ++L+++ NY+S ++R+ +R + G + + EP Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPG------GRNRKADAEP 170 >gi|254699252|ref|ZP_05161080.1| hypothetical protein Bsuib55_00082 [Brucella suis bv. 5 str. 513] gi|261749690|ref|ZP_05993399.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] gi|261739443|gb|EEY27369.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513] Length = 175 Score = 159 bits (402), Expect = 2e-37, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 81/177 (45%), Gaps = 10/177 (5%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M++ + G+WI V L S ++ R + P + +K++++S+P +SNG Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAAVEAGPGGFGGVDYVKTDVMSVPIISNGA 60 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + Y +L + V+ + + +D ++ G D ++ F+++R I Sbjct: 61 VTGYVAAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174 DLN+R I ++L+++ NY+S ++R+ +R + G + + EP Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPG------GRNRKADAEP 170 >gi|225686874|ref|YP_002734846.1| hypothetical protein BMEA_B1121 [Brucella melitensis ATCC 23457] gi|256261991|ref|ZP_05464523.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gi|225642979|gb|ACO02892.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|263091475|gb|EEZ16011.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] Length = 175 Score = 158 bits (400), Expect = 2e-37, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 81/177 (45%), Gaps = 10/177 (5%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M++ + G+WI V L S ++ R + P + +K++++S+P + NG Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAAVEAGPGGFGGVDYVKTDVMSVPIILNGA 60 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + Y + +L + V+ + + +D ++ G D ++ F+++R I Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174 DLN+R I ++L+++ NY+S ++R+ +R + G + + EP Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPG------GRNRKADAEP 170 >gi|17988516|ref|NP_541149.1| hypothetical protein BMEII0172 [Brucella melitensis bv. 1 str. 16M] gi|256042853|ref|ZP_05445799.1| hypothetical protein Bmelb1R_00115 [Brucella melitensis bv. 1 str. Rev.1] gi|260564091|ref|ZP_05834576.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|265989289|ref|ZP_06101846.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] gi|17984309|gb|AAL53413.1| hypothetical protein BMEII0172 [Brucella melitensis bv. 1 str. 16M] gi|260151734|gb|EEW86827.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M] gi|262999958|gb|EEZ12648.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. Rev.1] Length = 175 Score = 158 bits (400), Expect = 3e-37, Method: Composition-based stats. Identities = 38/177 (21%), Positives = 82/177 (46%), Gaps = 10/177 (5%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M++ + G+WI V L S ++ R + P + +K++++S+P +SNG Sbjct: 1 MIRIIVIGLWICAVALGSLFLAVNRDVSASAVVEAGPGGFGGVDYVKTDVMSVPIISNGA 60 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + Y + +L + V+ + + +D ++ G D ++ F+++R I Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174 DLN+R I ++L+++ NY+S ++R+ +R + G + + EP Sbjct: 120 INDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPG------GRNRKADAEP 170 >gi|222147601|ref|YP_002548558.1| hypothetical protein Avi_0778 [Agrobacterium vitis S4] gi|221734589|gb|ACM35552.1| conserved hypothetical protein [Agrobacterium vitis S4] Length = 176 Score = 157 bits (396), Expect = 8e-37, Method: Composition-based stats. Identities = 46/177 (25%), Positives = 85/177 (48%), Gaps = 11/177 (6%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K + +G+W +V L++ Y + T +++ E +++P + NG Sbjct: 1 MVKIVIAGVWACIVALVAVYFSIQVATAPPPVEEAKAP---PTEVVRGEAITVPFLENGK 57 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 ++ YF+ + SF+V+ + + + TD L+TLL G M D + D ++ I Sbjct: 58 VKGYFIGRFSFMVDKEKAGAMQMPMTALMTDQLFTLLVGNSMVDLSKSTKLDVDGFKQAI 117 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174 K +N RLGS I++VLI++L++L D+R G + ++E K P Sbjct: 118 KTGINKRLGSDVINDVLIEQLDFLGKDDIRE-----GGGGKPKLLPAVKIVEGEKAP 169 >gi|239834415|ref|ZP_04682743.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] gi|239822478|gb|EEQ94047.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301] Length = 180 Score = 156 bits (394), Expect = 1e-36, Method: Composition-based stats. Identities = 33/179 (18%), Positives = 81/179 (45%), Gaps = 7/179 (3%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M++ + G+WI V S + ++ + + +K++++S+P +SNG Sbjct: 1 MIRIIAIGLWICAVAFGSLFFAVRQNASSPDGAQAAVGGFGGVDYVKTDVMSVPILSNGG 60 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + Y + +L + ++ + + +D ++ G D +++ F+++R I Sbjct: 61 VAGYVVTQLVYTIDSNVRKKLSVPLEFFISDEIFRKFYG-SYSDTKEVEKVSFEDVRASI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSL-IEKNKEPL 175 DLN+R I ++L+++ NY+S ++R+ +R + K + +P+ Sbjct: 120 IADLNARFPEPVIKDLLVEQFNYISAEEIRAMNMR--GAPTPTAPGKQVPEKQAAAQPV 176 >gi|150395515|ref|YP_001325982.1| hypothetical protein Smed_0288 [Sinorhizobium medicae WSM419] gi|150027030|gb|ABR59147.1| conserved hypothetical protein [Sinorhizobium medicae WSM419] Length = 189 Score = 154 bits (390), Expect = 4e-36, Method: Composition-based stats. Identities = 47/180 (26%), Positives = 87/180 (48%), Gaps = 8/180 (4%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 MLK + +G+W+ VVTL S Y + ++ + + + E++++PS+ +G Sbjct: 1 MLKLVLTGVWVCVVTLGSVYFSMQHASAPVLSD-AEADRRASQEYVPGEMITVPSIRDGA 59 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 +Q YFL KLSF + + TD LY +L G D AF + + + Sbjct: 60 VQGYFLAKLSFSASREGIAGLHAPLRQLVTDELYDMLVGSKFIDVANTAAFDLPSFKLAV 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMR---SNCLRLGSNASDLMTQKGSLIEKNKEP 174 +E LN + G + ISEVL+++L YL+ D+ ++ + ++ + G + ++ P Sbjct: 120 REGLNKKFGGEVISEVLVEQLEYLTKDDVERLANSQNQPHQKPVPIVDRHGK-VASDRLP 178 >gi|256059816|ref|ZP_05450011.1| hypothetical protein Bneo5_05665 [Brucella neotomae 5K33] gi|261323796|ref|ZP_05962993.1| conserved hypothetical protein [Brucella neotomae 5K33] gi|261299776|gb|EEY03273.1| conserved hypothetical protein [Brucella neotomae 5K33] Length = 172 Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats. Identities = 37/177 (20%), Positives = 80/177 (45%), Gaps = 10/177 (5%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M++ + G+WI V L S ++ R + P + +K++++S+P +SNG Sbjct: 1 MIRIIVIGLWICAVALGSLFLAINRDVSASAAVEAGPGGFGGVDYVKTDVMSVPIISNGA 60 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + Y + +L + V+ + + +D ++ G D ++ F+++R I Sbjct: 61 VTGYVVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174 DLN+R I ++L ++ NY+S ++ + +R + G + + EP Sbjct: 120 INDLNARFPEPVIKDLLAEQFNYISSEEIHTMNMRAHAQPG------GRNRKADAEP 170 >gi|325291974|ref|YP_004277838.1| hypothetical protein AGROH133_04009 [Agrobacterium sp. H13-3] gi|325059827|gb|ADY63518.1| hypothetical protein AGROH133_04009 [Agrobacterium sp. H13-3] Length = 178 Score = 154 bits (388), Expect = 6e-36, Method: Composition-based stats. Identities = 49/176 (27%), Positives = 90/176 (51%), Gaps = 6/176 (3%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 MLK L +G+W+ VTL + Y + + + ++K E ++IP +++G Sbjct: 1 MLKLLLTGVWVCAVTLGAVYFSVQMATAPSSGDEA-GAKKASLQLVKGESITIPVINDGG 59 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + YFL ++S V+ + + TD L+TLL+G M + I F D +++I Sbjct: 60 VNGYFLSRISLRVDKDKMAKIELPATQLMTDELFTLLAGSSMVNIANISTFDPDVFKQRI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKE 173 +E LN +LG + + +VLI++L+YLS D+R + + + +G ++ KE Sbjct: 120 REGLNKKLGDEVVGDVLIEQLDYLSKADIRE--QKGNGSPRSVKLVEGEKVDTGKE 173 >gi|115523205|ref|YP_780116.1| hypothetical protein RPE_1184 [Rhodopseudomonas palustris BisA53] gi|115517152|gb|ABJ05136.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 150 Score = 153 bits (387), Expect = 9e-36, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 72/150 (48%), Gaps = 4/150 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 MLK L +G+W+ +VT + + ++ PP + K+++ ++P +++G Sbjct: 1 MLKLLITGVWVCIVTAGAS-LGVSYWNESRAALPPPPDYAEGLVYEKTKVFNVPMIADGG 59 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 +Q Y + +L F + R D + + G P DF ++ + + L + + Sbjct: 60 VQGYIVAQLVFTADAKVLRQLPVPAESFVVDEAFRSIYGDPKLDFKKLARYDLNQLTQSV 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMR 147 KE +N RL + + +VL+ + NY+S +R Sbjct: 120 KERVNKRLQADVLRDVLVQDFNYVSKDQIR 149 >gi|15887931|ref|NP_353612.1| hypothetical protein Atu8132 [Agrobacterium tumefaciens str. C58] gi|15155527|gb|AAK86397.1| conserved hypothetical protein [Agrobacterium tumefaciens str. C58] Length = 177 Score = 153 bits (386), Expect = 1e-35, Method: Composition-based stats. Identities = 47/166 (28%), Positives = 83/166 (50%), Gaps = 9/166 (5%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 MLK L +G+W+ VTL + Y + + ++K E ++IP +++G Sbjct: 1 MLKLLLTGVWVCAVTLGAVYFSVQMATAP--APDEAGAKKADLQLVKGESITIPVINDGG 58 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + YFL ++S V+ ++ + TD L+TLL+G M + I F + +++I Sbjct: 59 VNGYFLSRISLRVDKAKMAKIELPATQLMTDELFTLLAGSSMVNIANISTFDPEAFKQRI 118 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQ 163 +E LN RL + + +VLI++L+YLS D+R N S + Sbjct: 119 REGLNKRLDDEVVEDVLIEQLDYLSKADIRE----QKGNGSPHSVK 160 >gi|110632628|ref|YP_672836.1| hypothetical protein Meso_0267 [Mesorhizobium sp. BNC1] gi|110283612|gb|ABG61671.1| conserved hypothetical protein [Chelativorans sp. BNC1] Length = 161 Score = 152 bits (385), Expect = 1e-35, Method: Composition-based stats. Identities = 49/161 (30%), Positives = 83/161 (51%), Gaps = 4/161 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M KFL + +WIS TL + + F S PP + +++ ++S+P V G Sbjct: 1 MFKFLLAAVWISAATLAAVFYSFQASQARSNAAPPPPF-FGGLDYVRTNVMSVPVVKEGG 59 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + YFLV+L + V + ++ + D L++ L G P DF ++ D LR I Sbjct: 60 VGGYFLVRLVYTVEPERLKALSIPTDVLLIDQLHSYLYGNPQIDFSAKESVDLDALRNGI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNAS 158 ++ +N+R+G Q I EVL+++++YLS D+R N +R Sbjct: 120 RDSINARVGEQLIHEVLVEQVDYLSKADIRDNAIRRRIGPD 160 >gi|15964444|ref|NP_384797.1| hypothetical protein SMc03057 [Sinorhizobium meliloti 1021] gi|307311586|ref|ZP_07591227.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C] gi|15073621|emb|CAC45263.1| Conserved hypothetical transmembrane protein [Sinorhizobium meliloti 1021] gi|306899603|gb|EFN30232.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C] Length = 188 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 7/172 (4%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 MLK + +G+W+ VTL S Y + +V + + + E+++IPS+ +G Sbjct: 1 MLKLVLTGVWVCAVTLGSVYFSMQHASAPVVSD-AEADRRASQEYVPGEMITIPSIKDGA 59 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 +Q YFL KLSF + + TD LY +L G D F + + Sbjct: 60 VQGYFLAKLSFSASREGIAKLHAPLRQLVTDELYDMLVGSRFIDVADTATFDLAAFKVAV 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMR---SNCLRLGSNASDLMTQKGS 166 K+ LN +LGS+ ISEVL+++L YL+ D+ ++ R ++ + G Sbjct: 120 KDGLNRKLGSEVISEVLVEQLEYLTKEDVERVANSQNRPYQKPVPILDRNGQ 171 >gi|90418353|ref|ZP_01226265.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] gi|90338025|gb|EAS51676.1| conserved hypothetical protein [Aurantimonas manganoxydans SI85-9A1] Length = 153 Score = 150 bits (380), Expect = 5e-35, Method: Composition-based stats. Identities = 33/152 (21%), Positives = 70/152 (46%), Gaps = 5/152 (3%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K L G+W+ VTL S Y + S+++ P + + K+E ++IP + + Sbjct: 1 MIKLLAVGLWVCAVTLGSSY--VMASINSAPSEEAEPNYFEGLDYRKTENITIPMIKDSA 58 Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 ++ Y L + + ++ D + L DF + F +L I Sbjct: 59 IRGYILARFVYTIDGKTVAQLKVPPDPFILDEAFRRLYTTDGFDFDEPTRFDLSSLTDGI 118 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149 ++ +N+R + + E+L+D+ +Y++ D+R+ Sbjct: 119 RDAVNARYSEELVKEILVDQFDYIAKDDIRNG 150 >gi|307318941|ref|ZP_07598372.1| conserved hypothetical protein [Sinorhizobium meliloti AK83] gi|306895355|gb|EFN26110.1| conserved hypothetical protein [Sinorhizobium meliloti AK83] Length = 188 Score = 150 bits (378), Expect = 8e-35, Method: Composition-based stats. Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 7/172 (4%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 MLK + +G+W+ VTL S Y + +V + + + E+++IPS+ +G Sbjct: 1 MLKLVLTGVWVCAVTLGSVYFSMQHASAPVVSD-AEADRRASQEYVPGEMITIPSIKDGA 59 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 +Q YFL KLSF + + TD LY +L G D F + + Sbjct: 60 VQGYFLAKLSFSASREGIAKLHAPLRQLVTDELYDMLVGSRFIDVADTATFDLAAFKVAV 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMR---SNCLRLGSNASDLMTQKGS 166 K+ LN +LGS+ ISEVL+++L YL+ D+ ++ R ++ + G Sbjct: 120 KDGLNRKLGSEVISEVLVEQLEYLTKEDVERVANSQNRPYQKPVPILDRNGQ 171 >gi|254502808|ref|ZP_05114959.1| hypothetical protein SADFL11_2847 [Labrenzia alexandrii DFL-11] gi|222438879|gb|EEE45558.1| hypothetical protein SADFL11_2847 [Labrenzia alexandrii DFL-11] Length = 152 Score = 148 bits (373), Expect = 3e-34, Method: Composition-based stats. Identities = 39/152 (25%), Positives = 66/152 (43%), Gaps = 3/152 (1%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K L +G+W+S+ LIS Y N+ A + + V++P + G Sbjct: 1 MIKMLVAGVWMSIAMLISGYGTAKFISAQNQTNNQEETAYVGLDYETLKPVNVPILFEGA 60 Query: 61 LQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 LQ Y + KL F + R D + L DF ++ + D L + + Sbjct: 61 LQGYVVAKLVFTADGDTLRKLPVPPHPFLVDEAFRALYADETLDFRNLERYDLDGLTEHL 120 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149 K N R+G + + +VL++E NY D+ S+ Sbjct: 121 KTVTNKRIGQKVVQDVLVEEFNYFDKADVLSH 152 >gi|90422636|ref|YP_531006.1| hypothetical protein RPC_1123 [Rhodopseudomonas palustris BisB18] gi|90104650|gb|ABD86687.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 152 Score = 148 bits (373), Expect = 4e-34, Method: Composition-based stats. Identities = 31/150 (20%), Positives = 65/150 (43%), Gaps = 4/150 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M++ L +G W +VT+ + + D + A+ K++++++P ++ G Sbjct: 3 MIRLLIAGAWACLVTVGASMAMSYWKQDRIAPPPAEE-ALGGLVYEKTKVINVPMIAEGS 61 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 +Q Y + +L F R D + + G DF + F + + Sbjct: 62 VQGYIVTQLVFTAEARALRQLPVPPEAFVVDEAFRSIYGDQKLDFKNLSRFDLSQFTQTV 121 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMR 147 +E +N RL + + +VL+ + NY+S +R Sbjct: 122 REHVNERLQTDAVRDVLVQDFNYVSKDQIR 151 >gi|86356342|ref|YP_468234.1| hypothetical protein RHE_CH00691 [Rhizobium etli CFN 42] gi|86280444|gb|ABC89507.1| hypothetical conserved protein [Rhizobium etli CFN 42] Length = 179 Score = 145 bits (367), Expect = 1e-33, Method: Composition-based stats. Identities = 46/173 (26%), Positives = 88/173 (50%), Gaps = 9/173 (5%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K + +GIW+ +TL S Y + T ++K E +++P + +G Sbjct: 1 MIKLVLTGIWVCAITLASVYFSV--YLATAPAPAATDSKQSALELVKGETITVPVIGDGG 58 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIA---TDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + YFL ++SF++N + + TD L++LL G M D IK+F R++I Sbjct: 59 ITGYFLGRISFMMNKDMLKGVTLPLTEMTTDELFSLLVGNKMVDLAHIKSFDPKAFREEI 118 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEK 170 ++ +N RLG +++++V++++L+YLS +++ N L +IE Sbjct: 119 RKGMNERLGGEYVADVMLEQLDYLSKEEVKQN---SAGQPKKLGAP-VKIIEG 167 >gi|220926493|ref|YP_002501795.1| hypothetical protein Mnod_6732 [Methylobacterium nodulans ORS 2060] gi|219951100|gb|ACL61492.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 148 Score = 145 bits (365), Expect = 3e-33, Method: Composition-based stats. Identities = 34/150 (22%), Positives = 71/150 (47%), Gaps = 5/150 (3%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 ++ + +GIWI +VTL+S Y + + P + K +++P +++G L Sbjct: 1 MRVVVTGIWICIVTLLSCYGVLTWGAGLFAQKTEP--YFEGLQYQKLRAINVPIIADGAL 58 Query: 62 QAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 Q Y + L F + + D + + G P DF ++ + + +I+ Sbjct: 59 QGYIVTTLVFTADAKLMHTLAVPPNAFVIDEAFRQIYGDPSLDFRRLAKYNINKRLTEIR 118 Query: 119 EDLNSRLGSQFISEVLIDELNYLSIVDMRS 148 +N RLG++ + +VL+++ N++ D+RS Sbjct: 119 AKVNERLGAEVVKDVLVEDFNFVPRKDVRS 148 >gi|27381958|ref|NP_773487.1| hypothetical protein bll6847 [Bradyrhizobium japonicum USDA 110] gi|27355128|dbj|BAC52112.1| bll6847 [Bradyrhizobium japonicum USDA 110] Length = 152 Score = 144 bits (363), Expect = 5e-33, Method: Composition-based stats. Identities = 27/148 (18%), Positives = 62/148 (41%), Gaps = 4/148 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M++ + +G+W+ ++T + Y + + K+ +S+P V NG Sbjct: 1 MIRLVLAGLWVCILTAGTSY-AVAYWKENGSLLPAKDAYLDGLQYQKTRALSVPMVENGN 59 Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 +Q Y + + + V + D + + DF ++ + L I Sbjct: 60 VQGYIVARFVYTVEARTMHQLNVPPEPFVVDEAFRRIYADDRLDFRKLARYDLSILTTGI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVD 145 K+ +N R+ + + +VL+++ NY+S + Sbjct: 120 KQRVNERMQADVVQDVLVEDFNYVSKEE 147 >gi|254473462|ref|ZP_05086859.1| conserved hypothetical protein [Pseudovibrio sp. JE062] gi|211957578|gb|EEA92781.1| conserved hypothetical protein [Pseudovibrio sp. JE062] Length = 162 Score = 144 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 28/158 (17%), Positives = 66/158 (41%), Gaps = 4/158 (2%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 +K L +G+WI +VT+++ Y L D ++ + + +++P + +G + Sbjct: 1 MKVLVTGVWICLVTVVAAYFTALYKTDFDPMLQ-KNAHLEGLDYQSTPTINVPVLEDGKI 59 Query: 62 QAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 Y + + F V+ D + L+ +F Q+K L ++++ Sbjct: 60 HGYIVAQFVFTVDSELLAKLAVPPHAFIVDEAFRLIYSKADKEFAQLKKSDLKQLTEEVR 119 Query: 119 EDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSN 156 + +N R + + +VLI + + +R N + + Sbjct: 120 DRVNERFATDIVQDVLIQDFTFHVPASLRDNIMENAAQ 157 >gi|114705546|ref|ZP_01438449.1| hypothetical protein FP2506_13809 [Fulvimarina pelagi HTCC2506] gi|114538392|gb|EAU41513.1| hypothetical protein FP2506_13809 [Fulvimarina pelagi HTCC2506] Length = 154 Score = 144 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 30/154 (19%), Positives = 64/154 (41%), Gaps = 4/154 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPL-AIKNTNIIKSELVSIPSVSNG 59 M+K + GIW +VV L S Y + + + ++ +++P +++ Sbjct: 1 MIKLIIVGIWATVVALGSSYAAITFTDKSGEAAGEKQSDYYAGLDYRSTDAITVPMIADK 60 Query: 60 VLQAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 +Q Y + + + ++ + + D + L DF + L + Sbjct: 61 RIQGYIIARFVYTIDGQIAAKLAVPPEPFVLDEAFRRLYASEDFDFANPSRYDLPGLMEA 120 Query: 117 IKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNC 150 IK +N+R G + + EVLI++ +Y+ +RS Sbjct: 121 IKTSVNARYGDELVHEVLIEQFDYVPKDTVRSAT 154 >gi|170744556|ref|YP_001773211.1| hypothetical protein M446_6520 [Methylobacterium sp. 4-46] gi|168198830|gb|ACA20777.1| conserved hypothetical protein [Methylobacterium sp. 4-46] Length = 148 Score = 144 bits (362), Expect = 6e-33, Method: Composition-based stats. Identities = 35/150 (23%), Positives = 71/150 (47%), Gaps = 5/150 (3%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 ++ + +GIWI VVTL+S Y + + P ++ K +++P +++G L Sbjct: 1 MRIVVTGIWICVVTLLSCYGVVTWGAGLFAQRTEP--YLEGLQYQKLRAINVPVIADGAL 58 Query: 62 QAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 Q Y + L F + + D + + G P DF ++ + +I+ Sbjct: 59 QGYIVTVLVFTADAKLMHTVAVPPNSFVIDEAFRQIYGDPSLDFRRMAKYNISKRLDEIR 118 Query: 119 EDLNSRLGSQFISEVLIDELNYLSIVDMRS 148 +N RLG++ + +VL+++ N++ D+RS Sbjct: 119 AKVNERLGAEVVKDVLVEDFNFVPRKDLRS 148 >gi|118589954|ref|ZP_01547358.1| hypothetical protein SIAM614_14855 [Stappia aggregata IAM 12614] gi|118437451|gb|EAV44088.1| hypothetical protein SIAM614_14855 [Stappia aggregata IAM 12614] Length = 151 Score = 143 bits (360), Expect = 9e-33, Method: Composition-based stats. Identities = 35/149 (23%), Positives = 63/149 (42%), Gaps = 4/149 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K L +G+W+S L S Y P A + V++P + G Sbjct: 1 MIKILVAGLWMSATMLASGYGTTQYLAAQKRVGDDEP-AFVGLDYETVNPVNVPILFEGT 59 Query: 61 LQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 LQ Y ++K+ F + R D + +L DF ++ + + +++ Sbjct: 60 LQGYVVIKMVFTADGDTLRRLPVPPHPFLVDEAFRVLYSDETLDFRSLERYDLEAFTERL 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDM 146 K+ N+RLG + +VL++E NY D+ Sbjct: 120 KKSTNARLGRSVVHDVLVEEFNYFDKADV 148 >gi|209547958|ref|YP_002279875.1| hypothetical protein Rleg2_0350 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209533714|gb|ACI53649.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 179 Score = 142 bits (359), Expect = 1e-32, Method: Composition-based stats. Identities = 46/166 (27%), Positives = 87/166 (52%), Gaps = 8/166 (4%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K + +G+W+ +TL S Y + T ++K E +++P + NG Sbjct: 1 MIKLVLTGVWVCAITLASVYFSV--YLATAPAPAATDSKQSALELVKGETITVPIIGNGA 58 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIA---TDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + YFL ++SF++N + +A TD L++LL G M D IK+F R++I Sbjct: 59 ITGYFLGRVSFMMNKEMLKGVTLPLAEMTTDELFSLLVGNKMVDIAHIKSFDPKAFREEI 118 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQ 163 K+ +N RLG +++++V++++L+YLS D++ + + T Sbjct: 119 KKGMNERLGGEYVADVMLEQLDYLSKEDVKES---SAGAPKKVGTP 161 >gi|116250512|ref|YP_766350.1| transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] gi|115255160|emb|CAK06234.1| putative transmembrane protein [Rhizobium leguminosarum bv. viciae 3841] Length = 179 Score = 142 bits (357), Expect = 3e-32, Method: Composition-based stats. Identities = 45/166 (27%), Positives = 86/166 (51%), Gaps = 8/166 (4%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K + +GIW+ +TL S Y + T ++K E +++P + NG Sbjct: 1 MIKLVLTGIWVCAITLASVYFSV--YLATAPAPAATDSKQSALELVKGETITVPIIGNGA 58 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + YFL ++SF++N + + TD L++LL G M D IK+F R++I Sbjct: 59 ITGYFLGRVSFMMNKDMLKGVTLPLSEMTTDELFSLLVGNKMVDIAHIKSFDPKAFREEI 118 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQ 163 K+ +N RLG +++++V++++L+YLS +++ + + T Sbjct: 119 KKGMNERLGGEYVADVMLEQLDYLSKEEVKES---SAGQPKKVGTP 161 >gi|188579937|ref|YP_001923382.1| hypothetical protein Mpop_0669 [Methylobacterium populi BJ001] gi|179343435|gb|ACB78847.1| conserved hypothetical protein [Methylobacterium populi BJ001] Length = 148 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 70/150 (46%), Gaps = 5/150 (3%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 ++ L SG+WI VT+ S Y ++ P ++ K ++IP V++G + Sbjct: 1 MRVLLSGLWICAVTIASCYAAVTFGGGFFSKSTEP--YLEGLQYQKLAPINIPMVADGKV 58 Query: 62 QAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 Q Y + L F + + D + + G DF ++ + + +I+ Sbjct: 59 QGYVIAVLVFTADAKLMHTLPVAPNAFVVDEAFRQIYGDTTIDFRKLARYDINGRLAQIR 118 Query: 119 EDLNSRLGSQFISEVLIDELNYLSIVDMRS 148 +N RLGS + +VL+DELN+++ ++RS Sbjct: 119 ARVNERLGSDVVKDVLVDELNFVAKREVRS 148 >gi|328545476|ref|YP_004305585.1| hypothetical protein SL003B_3860 [polymorphum gilvum SL003B-26A1] gi|326415218|gb|ADZ72281.1| hypothetical protein SL003B_3860 [Polymorphum gilvum SL003B-26A1] Length = 151 Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats. Identities = 32/152 (21%), Positives = 71/152 (46%), Gaps = 4/152 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K +G+W++ L S Y + V + + + V++P + +G Sbjct: 1 MMKLFLAGLWVTATALASSYGAVQWTTARTV-ENEAKASFGGIDYETIRPVNVPILEDGA 59 Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 L+ Y + +L F + ++ D + LL +F +++ + D L+ ++ Sbjct: 60 LRGYVVAQLVFTADADTLKALAVPPHPFIVDEAFRLLYADESLNFRRLERYDLDYLKTRV 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149 ++ +N+R+G I E+L++E NY + D+ S+ Sbjct: 120 RDAVNARIGEAVIREILVEEFNYFAKEDVLSH 151 >gi|241203136|ref|YP_002974232.1| hypothetical protein Rleg_0382 [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240857026|gb|ACS54693.1| conserved hypothetical protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 179 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 43/166 (25%), Positives = 85/166 (51%), Gaps = 8/166 (4%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K + +G+W+ +TL S Y + T ++K E +++P + NG Sbjct: 1 MIKLVLTGVWVCAITLASVYFSV--YLATAPAPAATDSKQSALELVKGETITVPIIGNGA 58 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + YFL ++SF++N + + TD L++LL G M D IK+F R++I Sbjct: 59 ITGYFLGRVSFMMNKDMLKGVTLPLSEMTTDELFSLLVGNKMVDIAHIKSFDPKAFREEI 118 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQ 163 K+ +N RLG +++++V++++L+YLS +++ + + Sbjct: 119 KKGMNERLGGEYVADVMLEQLDYLSKEEVKES---SAGQPKKVGKP 161 >gi|240137269|ref|YP_002961738.1| hypothetical protein MexAM1_META1p0520 [Methylobacterium extorquens AM1] gi|240007235|gb|ACS38461.1| conserved hypothetical protein; putative membrane or exported protein [Methylobacterium extorquens AM1] Length = 148 Score = 140 bits (354), Expect = 5e-32, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 5/150 (3%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 ++ L SG+WI VT+ S Y ++ P ++ K ++IP V+ G + Sbjct: 1 MRILVSGLWICAVTIASCYAAVTFGGGFFSKSTEP--YLEGLQYQKLAPINIPMVAEGKV 58 Query: 62 QAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 Q Y + L F + + D + + G DF ++ + + +I+ Sbjct: 59 QGYVIAVLVFTADAKLMHTLPVAPNAFVVDEAFRQIYGDTTIDFRKLARYDINGRLAQIR 118 Query: 119 EDLNSRLGSQFISEVLIDELNYLSIVDMRS 148 +N RLGS + +VL+DELN+++ ++RS Sbjct: 119 AKVNERLGSDVVKDVLVDELNFVAKREVRS 148 >gi|217976252|ref|YP_002360399.1| hypothetical protein Msil_0054 [Methylocella silvestris BL2] gi|217501628|gb|ACK49037.1| conserved hypothetical protein [Methylocella silvestris BL2] Length = 149 Score = 140 bits (353), Expect = 7e-32, Method: Composition-based stats. Identities = 33/149 (22%), Positives = 70/149 (46%), Gaps = 5/149 (3%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M++ S WI VTL + Y L T ++ P + + + K+E +S+P +++G Sbjct: 1 MIRIAASCAWILTVTLTATY-LGATWKSTAEQSTDSPHSPERLDRKKTEPISVPVIADGN 59 Query: 61 LQAYFLVKLSFIVNDSQE---RSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + Y + + ++++ + TD + L DF ++ + L + + Sbjct: 60 VAGYVVAQFIYLIDPEALNRLAAAPDAFITDEAFRKLY-VEKIDFAHLEKYDLPALTRFL 118 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDM 146 +N RLG+ I ++L+D+ N++S D+ Sbjct: 119 TTQVNRRLGADIIKDILVDQFNFVSKSDI 147 >gi|218528739|ref|YP_002419555.1| hypothetical protein Mchl_0706 [Methylobacterium chloromethanicum CM4] gi|254559280|ref|YP_003066375.1| hypothetical protein METDI0676 [Methylobacterium extorquens DM4] gi|218521042|gb|ACK81627.1| conserved hypothetical protein [Methylobacterium chloromethanicum CM4] gi|254266558|emb|CAX22322.1| conserved hypothetical protein; putative membrane or exported protein [Methylobacterium extorquens DM4] Length = 148 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 5/150 (3%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 ++ L SG+WI VT+ S Y ++ P ++ K ++IP V+ G + Sbjct: 1 MRVLVSGLWICAVTIASCYAAVTFGGGFFSKSTEP--YLEGLQYQKLAPINIPMVAEGKV 58 Query: 62 QAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 Q Y + L F + + D + + G DF ++ + + +I+ Sbjct: 59 QGYVIAVLVFTADAKLMHTLPVAPNAFVVDEAFRQIYGDTTIDFRKLARYDINGRLAQIR 118 Query: 119 EDLNSRLGSQFISEVLIDELNYLSIVDMRS 148 +N RLGS + +VL+DELN+++ ++RS Sbjct: 119 AKVNERLGSDVVKDVLVDELNFVAKREVRS 148 >gi|163850135|ref|YP_001638178.1| hypothetical protein Mext_0695 [Methylobacterium extorquens PA1] gi|163661740|gb|ABY29107.1| conserved hypothetical protein [Methylobacterium extorquens PA1] Length = 148 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 5/150 (3%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 ++ L SG+WI VT+ S Y ++ P ++ K ++IP V+ G + Sbjct: 1 MRVLVSGLWICAVTIASCYAAVTFGGGFFSKSTEP--YLEGLQYQKLAPINIPMVAEGKV 58 Query: 62 QAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 Q Y + L F + + D + + G DF ++ + + +I+ Sbjct: 59 QGYVIAVLVFTADAKLMHTLPVAPNAFVVDEAFRQIYGDSTIDFRKLARYDINGRLAQIR 118 Query: 119 EDLNSRLGSQFISEVLIDELNYLSIVDMRS 148 +N RLGS + +VL+DELN+++ ++RS Sbjct: 119 AKVNERLGSDVVKDVLVDELNFVAKREVRS 148 >gi|170748113|ref|YP_001754373.1| hypothetical protein Mrad2831_1695 [Methylobacterium radiotolerans JCM 2831] gi|170654635|gb|ACB23690.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM 2831] Length = 149 Score = 139 bits (351), Expect = 1e-31, Method: Composition-based stats. Identities = 32/151 (21%), Positives = 68/151 (45%), Gaps = 5/151 (3%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M + +F+G+WI +T++S + + + ++ K ++IP +++G Sbjct: 1 MTRIVFTGLWICAITVLSSFAVIAW--MPDLPKPKAEEYLEGLTYQKLRPLNIPIIADGA 58 Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 +Q Y L + F + D + + DF +K + D +I Sbjct: 59 VQGYILATIIFTAEAQLIKGAGVTPAPFVMDESFRQIYEDKDLDFRNLKKYNIDKRLDEI 118 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRS 148 K +N RLGS+ + +V+++ N+++ D+RS Sbjct: 119 KRRVNERLGSEVVKDVMVENFNFVTKKDIRS 149 >gi|190890394|ref|YP_001976936.1| hypothetical protein RHECIAT_CH0000769 [Rhizobium etli CIAT 652] gi|218516754|ref|ZP_03513594.1| hypothetical protein Retl8_25653 [Rhizobium etli 8C-3] gi|190695673|gb|ACE89758.1| hypothetical conserved protein [Rhizobium etli CIAT 652] Length = 179 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 8/166 (4%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K + +G+W+ +TL S Y + ++K E +++P + +G Sbjct: 1 MVKLVLTGVWVCAITLASVYFSVYMATAPAPAATDSKQ--SALELVKGETITVPVIGDGA 58 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIA---TDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + YFL ++SF++N + + TD L++LL G M D IK+F R++I Sbjct: 59 ITGYFLGRISFMMNKDMLKGVTLPLTEMTTDELFSLLVGNKMVDLAHIKSFDAKAFREEI 118 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQ 163 K+ +N RLG ++++EV++++L+YLS +++ N L Sbjct: 119 KKGMNERLGGEYVAEVMLEQLDYLSKEEVKQN---AAGEPKKLGAP 161 >gi|218509489|ref|ZP_03507367.1| hypothetical protein RetlB5_19254 [Rhizobium etli Brasil 5] Length = 179 Score = 139 bits (350), Expect = 1e-31, Method: Composition-based stats. Identities = 44/166 (26%), Positives = 84/166 (50%), Gaps = 8/166 (4%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K + +G+W+ +TL S Y + ++K E +++P + +G Sbjct: 1 MVKLVLTGVWVCAITLASVYFSVYMATAPAPAATDSKQ--SALELVKGETITVPVIGDGA 58 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIA---TDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + YFL ++SF++N + + TD L++LL G M D IK+F R++I Sbjct: 59 ITGYFLGRISFMMNKDLLKGVTLPLTEMTTDELFSLLVGNKMVDLAHIKSFDAKAFRQEI 118 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQ 163 K+ +N RLG ++++EV++++L+YLS +++ N L Sbjct: 119 KKGMNERLGGEYVAEVMLEQLDYLSKEEVKQN---AAGEPKKLGAP 161 >gi|182680484|ref|YP_001834630.1| hypothetical protein Bind_3585 [Beijerinckia indica subsp. indica ATCC 9039] gi|182636367|gb|ACB97141.1| conserved hypothetical protein [Beijerinckia indica subsp. indica ATCC 9039] Length = 149 Score = 138 bits (347), Expect = 4e-31, Method: Composition-based stats. Identities = 34/149 (22%), Positives = 70/149 (46%), Gaps = 5/149 (3%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 ML+ IWI +VT ++FY+ S+ + ++ + + +++P + +G Sbjct: 1 MLRLFLCCIWICIVTSVAFYVGSTWSLSRALHPQTQEMS-GHIESKTTANINVPMIQSGE 59 Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 L Y + + ++ S + + D + +L DF ++ + L+++I Sbjct: 60 LVGYIVTNFIYNIDQSDMKKLNISPEVFILDEAFHILFSQD-IDFNHLEKYQISALKERI 118 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDM 146 KE +N RLG FI ++LI E NY+ ++ Sbjct: 119 KERVNQRLGGDFIKDILIKEFNYIPKREI 147 >gi|121602859|ref|YP_989414.1| hypothetical protein BARBAKC583_1155 [Bartonella bacilliformis KC583] gi|120615036|gb|ABM45637.1| conserved hypothetical protein [Bartonella bacilliformis KC583] Length = 156 Score = 131 bits (329), Expect = 4e-29, Method: Composition-based stats. Identities = 30/157 (19%), Positives = 75/157 (47%), Gaps = 4/157 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K + G+W+ +V+L + + P + +E+++IP + +G Sbjct: 1 MIKMIALGLWVCLVSLGALMLGINSYKRDPNIPTTPVSTGEEIGSSDTEIMNIPILVDGS 60 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 +Q Y + +L+++V+ ++ + + D ++ G + I+ FD ++++I Sbjct: 61 VQGYLIAQLTYVVDKKAAQNIVVPVSVLIHDAIFQNFWG-SYSNVRMIERVKFDMVKQQI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLG 154 + +N R + + ++L+ + NY+S+ +R R G Sbjct: 120 MDQVNQRFSNPILKDLLVKQFNYISVEKIRGATRRSG 156 >gi|296445184|ref|ZP_06887144.1| conserved hypothetical protein [Methylosinus trichosporium OB3b] gi|296257358|gb|EFH04425.1| conserved hypothetical protein [Methylosinus trichosporium OB3b] Length = 160 Score = 130 bits (328), Expect = 6e-29, Method: Composition-based stats. Identities = 35/160 (21%), Positives = 61/160 (38%), Gaps = 16/160 (10%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 ML+ L GIW VTL S Y P ++ + K + +S+P +S G Sbjct: 1 MLRLLLIGIWTCCVTLASTYGAAYWKSHRGAPQ--PEAHVEKLEVRKVKPISVPIISEGQ 58 Query: 61 LQAYFLVKLSFIVNDSQER--------------SYLKEIATDYLYTLLSGPPMGDFVQIK 106 L+ Y + S++V ++ D + L DF I+ Sbjct: 59 LKGYISAEFSYVVVAPEKSHGGGHGEAAAGDGALDADSYVMDEAFRRLYADSNLDFRHIE 118 Query: 107 AFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDM 146 F + ++ + +N RLGS + E L+ ++ D+ Sbjct: 119 KFDLNAFTHEVTQRVNDRLGSGLVRETLVKSFAFVPKDDI 158 >gi|300024566|ref|YP_003757177.1| hypothetical protein Hden_3061 [Hyphomicrobium denitrificans ATCC 51888] gi|299526387|gb|ADJ24856.1| conserved hypothetical protein [Hyphomicrobium denitrificans ATCC 51888] Length = 155 Score = 129 bits (324), Expect = 2e-28, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 58/156 (37%), Gaps = 5/156 (3%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M++ + + T+ Y E + I+K+ +VS+P +S+G Sbjct: 1 MIRMILLAFVACLSTVGGVYGAVTWKSSMSAEPNKSENHK--LQILKTPMVSVPILSDGQ 58 Query: 61 LQAYFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + Y + +L F + + + D + L+ D + L + I Sbjct: 59 VLGYVVTRLQFTADSDLLKESSVQPEAFVADEAFRLIYETAPKDLKVGRKNAIKELSENI 118 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRL 153 N RLG + +V+ID YLS DM N R Sbjct: 119 ASGTNERLGRNVVKDVMIDSWTYLSKQDMMKNHERA 154 >gi|158422283|ref|YP_001523575.1| hypothetical protein AZC_0659 [Azorhizobium caulinodans ORS 571] gi|158329172|dbj|BAF86657.1| hypothetical protein [Azorhizobium caulinodans ORS 571] Length = 171 Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats. Identities = 32/170 (18%), Positives = 72/170 (42%), Gaps = 4/170 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+KF+ G+W+ VTL S Y + + P + + +++P + +G Sbjct: 1 MIKFVVIGVWVCAVTLASSYGAAYWAAGANLGKAEDP-YLPGLEYKRVPTITVPMIMDGQ 59 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 ++ Y + KL F + + + + ++ + + +I + ++ ++ Sbjct: 60 VKGYVIAKLVFTADAGTLKKLSVDPVVFVVNDAFSEIYNNGRVESGKISKYNLKDMTDRV 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSL 167 KE +N+RL I E+LID +NY+ D+R+ + ++ Sbjct: 120 KEKVNARLNGPVIQEILIDGINYVDKNDIRTVANQQQQSSKGQDKGDAKP 169 >gi|323136989|ref|ZP_08072069.1| flagellar basal body-associated protein FliL [Methylocystis sp. ATCC 49242] gi|322397750|gb|EFY00272.1| flagellar basal body-associated protein FliL [Methylocystis sp. ATCC 49242] Length = 149 Score = 124 bits (312), Expect = 4e-27, Method: Composition-based stats. Identities = 30/149 (20%), Positives = 61/149 (40%), Gaps = 5/149 (3%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M + LF G+W V TL + Y M + ++ K + +++P +++GV Sbjct: 1 MFRTLFIGLWACVATLGATYGGAYWRMHQNTAPAAE--HAEKLDVRKLKPITVPVIADGV 58 Query: 61 LQAYFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 L+ Y + S + + + + D + ++ DF I+ L +I Sbjct: 59 LRGYVSAEFSMVGPQADKHEHTLDPESFFLDEAFRVIYSESKIDFSDIQKADLSTLTSQI 118 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDM 146 ++N R+G + E L+ ++ DM Sbjct: 119 TANVNQRMGKNVVKETLVRNFTFVPREDM 147 >gi|319405386|emb|CBI79005.1| conserved exported hypothetical protein [Bartonella sp. AR 15-3] Length = 155 Score = 116 bits (291), Expect = 1e-24, Method: Composition-based stats. Identities = 33/156 (21%), Positives = 74/156 (47%), Gaps = 4/156 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M++ + G+WI +V L + + + +E++S+P +G Sbjct: 1 MIRMIAMGLWICLVALGALVFSLKVNAVDPNKPEETTPIAIEIGSNNTEIMSVPIFVDGN 60 Query: 61 LQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 +Q Y +V+L++IV+ + E+ + + D ++ G D +I+ F+ ++++I Sbjct: 61 VQGYIIVQLAYIVDKTVEKEISISVGTLINDTIFQYFWG-SYSDVREIEKVKFEMIKERI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRL 153 +D+N R + ++L+ + NYLS+ +RS Sbjct: 120 IDDVNQRFSKAVLKDLLVKQFNYLSVDKIRSMKNTR 155 >gi|319406962|emb|CBI80599.1| conserved exported hypothetical protein [Bartonella sp. 1-1C] Length = 155 Score = 115 bits (289), Expect = 2e-24, Method: Composition-based stats. Identities = 29/156 (18%), Positives = 70/156 (44%), Gaps = 4/156 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M++ + G+W+ +V L + + + +E++SIP + +G Sbjct: 1 MIRMVAMGLWVCLVALGALVFSLRVNAVDPNTSEKSAPIAVEIGSNNTEVMSIPILVDGD 60 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 +Q Y + + +++V+ E+ + D ++ G D I+ F+ ++++I Sbjct: 61 VQGYIIAQFAYVVDKIAEKEISIPVEVLINDTIFQYFWG-SYSDVRAIEKVKFEMIKERI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRL 153 +D+N R + ++L+ + NYLS+ +R + Sbjct: 120 IDDVNQRFSKAVLKDLLVKQFNYLSVDQIRDMKNKR 155 >gi|319403945|emb|CBI77533.1| conserved exported hypothetical protein [Bartonella rochalimae ATCC BAA-1498] Length = 155 Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 28/156 (17%), Positives = 72/156 (46%), Gaps = 4/156 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M++ + G+W+ +V L + + + + +E++S+P + +G Sbjct: 1 MIRMIAMGLWVCLVALGALVLSLRVNAVDPNTSEKSAPVAVEIGSNNTEVMSVPILVDGD 60 Query: 61 LQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 +Q Y + + +++V+ + E+ + D ++ G D I+ F+ ++++I Sbjct: 61 VQGYIIAQFAYVVDKTAEKEISIPVGVLINDTIFQYFWG-SYSDVRAIEKVKFEMIKERI 119 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRL 153 +D+N R + ++L+ + NYLS+ +R + Sbjct: 120 IDDVNKRFSKAVLKDLLVKQFNYLSVDQIRGMKNKR 155 >gi|315122296|ref|YP_004062785.1| hypothetical protein CKC_02740 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495698|gb|ADR52297.1| hypothetical protein CKC_02740 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 191 Score = 115 bits (287), Expect = 3e-24, Method: Composition-based stats. Identities = 113/169 (66%), Positives = 137/169 (81%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 F FSGIWIS++T+ SFY+LFLRS+D +E+ P ++ ++I ELV+IPS+SNG+LQA Sbjct: 19 FFFSGIWISIITIASFYILFLRSVDPQIESSKPLTTEQSIHMITGELVAIPSISNGILQA 78 Query: 64 YFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNS 123 YF VKLSFIVND Q + YLKEI+TDYLYTLLSGPPMGD VQIK+FG DN RKKIKEDLN Sbjct: 79 YFFVKLSFIVNDRQSKYYLKEISTDYLYTLLSGPPMGDIVQIKSFGMDNFRKKIKEDLNL 138 Query: 124 RLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNK 172 +LGSQFIS+VLI+ELNYLSI D+R NC L S+LM QK SL++K K Sbjct: 139 KLGSQFISDVLINELNYLSIADIRLNCFHLSDKESNLMAQKKSLLDKAK 187 >gi|319898621|ref|YP_004158714.1| hypothetical protein BARCL_0449 [Bartonella clarridgeiae 73] gi|319402585|emb|CBI76130.1| conserved exported protein of unknown function [Bartonella clarridgeiae 73] Length = 152 Score = 110 bits (276), Expect = 6e-23, Method: Composition-based stats. Identities = 31/149 (20%), Positives = 68/149 (45%), Gaps = 4/149 (2%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 + G+W+ +V L + S + +E++S+P + +G +Q Sbjct: 1 MIAMGLWVCLVALGALVFGLRMSAVDPNSSEETAPIPVEVGSNNTEIMSVPVLVDGDVQG 60 Query: 64 YFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 Y +V+L+++V+ + E+ + D ++ G D I+ F ++K+I +D Sbjct: 61 YVIVQLTYVVDKTIEKEISIPVGVLINDIIFQYFWG-SYSDVRAIEKVKFQMIKKRIIDD 119 Query: 121 LNSRLGSQFISEVLIDELNYLSIVDMRSN 149 +N R + ++L+ + NYLS+ +R Sbjct: 120 VNQRFSKVVLKDLLVKQFNYLSVDKIRGM 148 >gi|23009326|ref|ZP_00050417.1| hypothetical protein Magn03004241 [Magnetospirillum magnetotacticum MS-1] Length = 130 Score = 107 bits (267), Expect = 7e-22, Method: Composition-based stats. Identities = 24/125 (19%), Positives = 49/125 (39%), Gaps = 5/125 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 ++ L +G+WI VT+ S Y ++ P ++ K ++IP V+ G + Sbjct: 1 MRVLVTGLWICAVTIASCYAAVTFGGGFFSKSTEP--YLEGLQYQKLAPINIPMVAEGKV 58 Query: 62 QAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 Q Y + L F + + D + + G DF ++ + + +I+ Sbjct: 59 QGYVIAVLVFTADAKLMHTLPVAPNAFVVDEAFRQIYGDTTLDFRKLARYDINARLAQIR 118 Query: 119 EDLNS 123 +N Sbjct: 119 AKVNE 123 >gi|319409201|emb|CBI82845.1| conserved exported hypothetical protein [Bartonella schoenbuchensis R1] Length = 152 Score = 105 bits (262), Expect = 3e-21, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 67/149 (44%), Gaps = 4/149 (2%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 + G+W +V L + + + ++ + ++E++S+P + GV+Q Sbjct: 1 MIAMGVWGCLVALGILMLSVKVNAVKPDISEASAPVVEEVSSGQTEVISVPILVEGVVQG 60 Query: 64 YFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 Y + +L+++++ E+ + D ++ D ++ F+ ++K+I ++ Sbjct: 61 YIISQLTYLIDKKVEKDVSLPLSVLINDAIFKCFW-DSYSDVRAVEKIKFETVKKQIIDE 119 Query: 121 LNSRLGSQFISEVLIDELNYLSIVDMRSN 149 +N + + ++L+ + NYL +R Sbjct: 120 VNQHFPTPVVKDLLVKQFNYLPADQIRDM 148 >gi|312115268|ref|YP_004012864.1| hypothetical protein Rvan_2550 [Rhodomicrobium vannielii ATCC 17100] gi|311220397|gb|ADP71765.1| hypothetical protein Rvan_2550 [Rhodomicrobium vannielii ATCC 17100] Length = 151 Score = 103 bits (256), Expect = 1e-20, Method: Composition-based stats. Identities = 32/149 (21%), Positives = 65/149 (43%), Gaps = 5/149 (3%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M + L + I+ VTL + + + + + +A + IK + ++IP + G Sbjct: 1 MFRDLATAALIAAVTLGAVFAGGIAANRAISSPPAEQVAEEIP--IKLKQLTIPVIETGG 58 Query: 61 LQAYFLVKLSFIVN---DSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 +Q Y L+++S + N +Y++ TD L ++ + I Sbjct: 59 VQGYVLLQMSVVANVKSGGHTSNYIELAVTDEALKALFLKDRLALSKLTKDSLPKITDDI 118 Query: 118 KEDLNSRLGSQFISEVLIDELNYLSIVDM 146 +++ NS+LG I EV I L++L ++ Sbjct: 119 RKNANSKLGGDTIKEVFISSLHFLGKEEL 147 >gi|265985843|ref|ZP_06098578.1| conserved hypothetical protein [Brucella sp. 83/13] gi|264664435|gb|EEZ34696.1| conserved hypothetical protein [Brucella sp. 83/13] Length = 173 Score = 102 bits (253), Expect = 3e-20, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 50/119 (42%), Gaps = 5/119 (4%) Query: 60 VLQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 + +L + V+ + + +D ++ G D ++ F+++R Sbjct: 51 RRYGLCVAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSS 109 Query: 117 IKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQK-GSLIEKNKEP 174 I DLN+R I ++L+++ NY+S ++R+ +R + + ++ EP Sbjct: 110 IINDLNARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPGGRNRKADAEPAAQDAEP 168 >gi|56695123|ref|YP_165470.1| flagellar basal body-associated protein FliL [Ruegeria pomeroyi DSS-3] gi|56676860|gb|AAV93526.1| flagellar basal body-associated protein FliL [Ruegeria pomeroyi DSS-3] Length = 168 Score = 95.1 bits (235), Expect = 3e-18, Method: Composition-based stats. Identities = 21/152 (13%), Positives = 46/152 (30%), Gaps = 18/152 (11%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVP-------------PLAIKNTNIIKSE 49 K L G+ +++V + + + + P A+ N + + Sbjct: 18 KGLIVGLVLALVGAGGGFYATVSGLIPLGAQPAEEHGESGGDHGAVVPDALPNVAYVDLQ 77 Query: 50 LVSIPSVSNGVLQAYFLVKLSFIVNDSQER--SYLKEIATDYLYTLLSGPPMGDFVQIKA 107 + + + G Q + V + ++ D L L + D Sbjct: 78 PIMVSLLGEGG-QRHLRFHAQLEVPEQYLADVEKIRPRIVDVLNGYLRAIEISDLSDP-- 134 Query: 108 FGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 LR ++ +N G + +VL+ E Sbjct: 135 LALTRLRGHMQRRINIVAGEGRVKDVLVMEFV 166 >gi|254720784|ref|ZP_05182595.1| hypothetical protein Bru83_15047 [Brucella sp. 83/13] Length = 117 Score = 95.1 bits (235), Expect = 4e-18, Method: Composition-based stats. Identities = 21/113 (18%), Positives = 50/113 (44%), Gaps = 5/113 (4%) Query: 66 LVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN 122 + +L + V+ + + +D ++ G D ++ F+++R I DLN Sbjct: 1 MAQLVYTVDSNIHKKLTVPLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSIINDLN 59 Query: 123 SRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQK-GSLIEKNKEP 174 +R I ++L+++ NY+S ++R+ +R + + ++ EP Sbjct: 60 ARFPEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPGGRNRKADAEPAAQDAEP 112 >gi|114566395|ref|YP_753549.1| flagellar protein (FliL)-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] gi|114337330|gb|ABI68178.1| flagellar protein (FliL)-like protein [Syntrophomonas wolfei subsp. wolfei str. Goettingen] Length = 159 Score = 92.8 bits (229), Expect = 2e-17, Method: Composition-based stats. Identities = 25/142 (17%), Positives = 61/142 (42%), Gaps = 9/142 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 +K + G+ + VV + Y L M ++ + N+++ + ++++ Sbjct: 19 MKLIIIGLLVFVVAVGGSYFLMKSLMAPLMPKQEGAGKLMTGNLVEVGEFTT-NINDVNG 77 Query: 62 QAYFLVKLSFIV--NDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 Q + VK++ V +D + + + + D + T++S + D L+ + Sbjct: 78 QRFLKVKVTVEVSTDDKKAQEKITQYMPVIKDSILTIISSKTVADLDVRNRNN---LKAE 134 Query: 117 IKEDLNSRLGSQFISEVLIDEL 138 IK DLN+++G+ + V + Sbjct: 135 IKNDLNAKIGANTVLNVYFTDF 156 >gi|297617149|ref|YP_003702308.1| flagellar basal body-associated protein FliL [Syntrophothermus lipocalidus DSM 12680] gi|297144986|gb|ADI01743.1| flagellar basal body-associated protein FliL [Syntrophothermus lipocalidus DSM 12680] Length = 160 Score = 92.4 bits (228), Expect = 2e-17, Method: Composition-based stats. Identities = 24/141 (17%), Positives = 56/141 (39%), Gaps = 8/141 (5%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDT-MVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 L+ + G+ + ++ + Y + + + + + ++++ + ++ + Sbjct: 21 LQIIVVGLVVFLMCMGGAYFMIRSLLAPLLPQEEEKKSSSGEVVLVEAGEFTT-NIYDIN 79 Query: 61 LQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 Y ++ V D + L + D + ++LS + D DNLRK I Sbjct: 80 GTRYLKAEVYLQVPDKKVEKELETVMPVVKDEILSILSSQTVADLDVRNR---DNLRKTI 136 Query: 118 KEDLNSRLGSQFISEVLIDEL 138 KE LN +LG + ++ V Sbjct: 137 KERLNRKLGGEKVTGVYFTSF 157 >gi|306840125|ref|ZP_07472910.1| Hypothetical protein BROD_2998 [Brucella sp. NF 2653] gi|306404770|gb|EFM61064.1| Hypothetical protein BROD_2998 [Brucella sp. NF 2653] Length = 100 Score = 89.7 bits (221), Expect = 1e-16, Method: Composition-based stats. Identities = 20/95 (21%), Positives = 44/95 (46%), Gaps = 2/95 (2%) Query: 81 YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNY 140 L+ +D ++ G D ++ F+++R I DLN+R I ++L+++ NY Sbjct: 2 PLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSIINDLNARFPEPVIKDLLVEQFNY 60 Query: 141 LSIVDMRSNCLRLGSNASDLMTQK-GSLIEKNKEP 174 +S ++R+ +R + + ++ EP Sbjct: 61 ISSEEIRTMNMRAHAQPGGRNRKADAEPAAQDAEP 95 >gi|261756161|ref|ZP_05999870.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp. F5/99] gi|261736145|gb|EEY24141.1| LOW QUALITY PROTEIN: conserved hypothetical protein [Brucella sp. F5/99] Length = 107 Score = 89.3 bits (220), Expect = 2e-16, Method: Composition-based stats. Identities = 22/109 (20%), Positives = 48/109 (44%), Gaps = 10/109 (9%) Query: 69 LSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL 125 L + V+ + + +D ++ G D ++ F+++R I DLN+R Sbjct: 1 LVYTVDSNIHKKLTVPLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSIINDLNARF 59 Query: 126 GSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174 I ++L+++ NY+S ++R+ +R + G + + EP Sbjct: 60 PEPVIKDLLVEQFNYISSEEIRTMNMRAHAQPG------GRNRKADAEP 102 >gi|78358625|ref|YP_390074.1| flagellar protein FliL [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78221030|gb|ABB40379.1| flagellar protein FliL [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 158 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 23/143 (16%), Positives = 51/143 (35%), Gaps = 9/143 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIP----SVS 57 LK++ + + ++ + F + ++V++P ++S Sbjct: 14 LKWIIMIVVLLLLAGGGAFAYFTFFAGSSDPAQTDQTTKAEEVPKDVQVVTLPTFLVNLS 73 Query: 58 NGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 + + + Y + L V + + L D + LLS D ++ L+ Sbjct: 74 DPLGRRYLKMTLDVEVINPKVAEELNKSTARVQDAMILLLSSKSYADLAPLENKLL--LK 131 Query: 115 KKIKEDLNSRLGSQFISEVLIDE 137 +I + LN LG + +V E Sbjct: 132 NEIVDRLNQILGGSKVRQVYFTE 154 >gi|209964636|ref|YP_002297551.1| flagellar basal body-associated protein FliL, putative [Rhodospirillum centenum SW] gi|209958102|gb|ACI98738.1| flagellar basal body-associated protein FliL, putative [Rhodospirillum centenum SW] Length = 170 Score = 86.6 bits (213), Expect = 1e-15, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 49/142 (34%), Gaps = 6/142 (4%) Query: 1 MLKFLF--SGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSN 58 M K + + + + + Y++F + D P + + + +P + + Sbjct: 21 MKKIVLFALALLMLIGGGVGGYIMFGQHKDGAHAAEEKPKPVGPPAFVTIGPLILPVIGD 80 Query: 59 GVLQAYFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGP-PMGDFVQIKAFGFDNLR 114 ++ ++ ++ V D + + T L G + + +R Sbjct: 81 KRVEQTVMLTVAIEVPDEATKEQVKQISPRLNAAFLTALYGNIGKAQVLDGQIIDVAGVR 140 Query: 115 KKIKEDLNSRLGSQFISEVLID 136 K+ E LG+ + +VLI Sbjct: 141 SKLMEAAVKELGADVVKDVLIQ 162 >gi|189023197|ref|YP_001932938.1| hypothetical protein BAbS19_II10090 [Brucella abortus S19] gi|189021771|gb|ACD74492.1| hypothetical protein BAbS19_II10090 [Brucella abortus S19] Length = 93 Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats. Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 7/94 (7%) Query: 81 YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNY 140 L+ +D ++ G D ++ F+++R I DLN+R I ++L+++ NY Sbjct: 2 PLEYFISDEIFHKFYG-SYSDTKSVEKVSFEDVRSSIINDLNARFPEPVIKDLLVEQFNY 60 Query: 141 LSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174 +S ++R+ +R + G + + EP Sbjct: 61 ISSEEIRTMNMRAHAQPG------GRNRKADAEP 88 >gi|317151984|ref|YP_004120032.1| flagellar basal body-associated protein FliL [Desulfovibrio aespoeensis Aspo-2] gi|316942235|gb|ADU61286.1| flagellar basal body-associated protein FliL [Desulfovibrio aespoeensis Aspo-2] Length = 165 Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 54/148 (36%), Gaps = 14/148 (9%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSE---------LVS 52 LK++ + + V+ + ++ + A + + +E + Sbjct: 16 LKWIIIAVALIVLGVGGYFGYTMFLAAPDEAQTAESGAGEEGAGVPTESLEGKLVPLPMF 75 Query: 53 IPSVSNGVLQAYFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFG 109 + ++++ + + Y + + V D + + D L L S D +KA Sbjct: 76 LVNLADPLGRRYLKLGMEVEVRDEKAEQALLKYEAKIKDTLLLLFSSKTYDDLSTMKAK- 134 Query: 110 FDNLRKKIKEDLNSRLGSQFISEVLIDE 137 L+++I + LN +G I V I E Sbjct: 135 -VELKQEIVDRLNQIVGKGAILRVYITE 161 >gi|260432136|ref|ZP_05786107.1| flagellar basal body-associated protein FliL [Silicibacter lacuscaerulensis ITI-1157] gi|260415964|gb|EEX09223.1| flagellar basal body-associated protein FliL [Silicibacter lacuscaerulensis ITI-1157] Length = 165 Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 42/146 (28%), Gaps = 13/146 (8%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNT-----------NIIKSELVSI 53 L GI +++ Y L + + A + V + Sbjct: 20 LIIGIVLALAGAAGGYFLTTSGLLPIGATKTEKSAEHTPGESPVSALPVVEFVDLPPVIV 79 Query: 54 PSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113 ++ F +L + E +K D + T L + D + + Sbjct: 80 SVNTSDSRHLKFHAQLEVEAAHAAEVEAMKPRIMDVMNTYLRAIDLSDLQ--DSLALMRI 137 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELN 139 R + + +G + +VL+ E Sbjct: 138 RGHLHRRIGMVVGEGRVRDVLVMEFV 163 >gi|144899180|emb|CAM76044.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense MSR-1] Length = 155 Score = 84.7 bits (208), Expect = 5e-15, Method: Composition-based stats. Identities = 18/151 (11%), Positives = 46/151 (30%), Gaps = 14/151 (9%) Query: 1 MLKFLFSGIWISVVT---LISFYML---------FLRSMDTMVENHVPPLAIKNTNIIKS 48 M++ +F I +V + Y L V + + ++ Sbjct: 1 MVRLIFIVIAFLLVMGGLVGGLYFWGIDPLEKFNVLIGNAPSVPGAEVKPIVSPPSYVEY 60 Query: 49 ELVSIPSVSNGVLQAYFLVKLSFIVNDSQER--SYLKEIATDYLYTLLSGPPMGDFVQIK 106 L+S+P + ++ + L V + + + + Sbjct: 61 GLLSVPVIEEHEVRKQVEMILRLEVPFEKREIVAQNIPRLQSAYLQDMMEYLPIHLRNGR 120 Query: 107 AFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 + +++ + +G+ F+ VLID+ Sbjct: 121 RLDPPTVSQRLLKLTEKTIGAGFVKAVLIDQ 151 >gi|89069805|ref|ZP_01157140.1| flagellar basal body-associated protein FliL [Oceanicola granulosus HTCC2516] gi|89044606|gb|EAR50722.1| flagellar basal body-associated protein FliL [Oceanicola granulosus HTCC2516] Length = 162 Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 40/143 (27%), Gaps = 11/143 (7%) Query: 5 LFSGIWISVVTLISFYMLFLRSM------DTMVENHVPPLAIKNTNIIKSELVSIPSVSN 58 L G+ +++ + + M T P + + + + I + Sbjct: 21 LLVGVVLALAGAGGGFFIVSSGMIGGGARATESAEPAAPEPLAPVAFLPLDPIVIS-LPP 79 Query: 59 GVLQAYFLVKLSFIVNDSQERSYL--KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 + V + + D L L +GD LR + Sbjct: 80 RSGGGHLKFTAQLEVPPEELAQVAAIQPRIVDVLNGYLRAVDLGDLEDPAM--LIRLRAQ 137 Query: 117 IKEDLNSRLGSQFISEVLIDELN 139 + + G ++++LI E Sbjct: 138 MLHRIGVVAGEGRVNDLLIMEFV 160 >gi|254476693|ref|ZP_05090079.1| flagellar basal body-associated protein FliL [Ruegeria sp. R11] gi|214030936|gb|EEB71771.1| flagellar basal body-associated protein FliL [Ruegeria sp. R11] Length = 156 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 45/154 (29%), Gaps = 21/154 (13%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPL------------------AIKNTNII 46 L G+ +++ + + ++ P I N I Sbjct: 3 LIIGVVLAIAGAGGGFFAVQSGLLPFGQSAAPEGVKATEVAPEGVDNGESAEDIANLAFI 62 Query: 47 KSELVSIPSVSNGVLQAY-FLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQI 105 + E + I LQ F +L + E + D L + L + D Sbjct: 63 EMEPIIISLRKASGLQHLRFRSQLEVDLAHQAEVEKILPRIVDVLNSYLRALELEDLTDP 122 Query: 106 KAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 LR ++ +N G + ++LI + Sbjct: 123 --MALPKLRAQMLRRINIAAGQGRVRDLLIMDFV 154 >gi|99082788|ref|YP_614942.1| flagellar basal body-associated protein FliL [Ruegeria sp. TM1040] gi|99039068|gb|ABF65680.1| Flagellar fliL protein [Ruegeria sp. TM1040] Length = 174 Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 44/154 (28%), Gaps = 21/154 (13%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLA------------------IKNTNII 46 L G+ + + + + P +A I N I Sbjct: 21 LIIGLVLGIAGAGGGFYAVQSGLLPFGNTPAPEMAQATKEAPEGVDKGESAEEIANLAFI 80 Query: 47 KSELVSIPSVSNGVLQAY-FLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQI 105 + E + + +Q F +L D E + D L + L + D Sbjct: 81 EMEPIVVTLNRASGVQQLRFRAQLEVNQADQDEVETVLPRVVDVLNSYLRALELEDLTDP 140 Query: 106 KAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 LR ++ +N G + ++LI + Sbjct: 141 --MALPKLRAQMLRRINIVTGQGRVRDLLIMDFV 172 >gi|260772329|ref|ZP_05881245.1| flagellar biosynthesis protein FliL [Vibrio metschnikovii CIP 69.14] gi|260611468|gb|EEX36671.1| flagellar biosynthesis protein FliL [Vibrio metschnikovii CIP 69.14] Length = 169 Score = 81.6 bits (200), Expect = 4e-14, Method: Composition-based stats. Identities = 16/144 (11%), Positives = 40/144 (27%), Gaps = 8/144 (5%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHV---PPLAIKNTNIIKSELVSIPSVSNGV 60 + + + + + + L D + ++ + + + +VS Sbjct: 20 IIVAAAVLLLGGGGAAFFLMGSGSDQQSADTANRRAAPSVAPVSYVNIAQPFVFNVSGDT 79 Query: 61 LQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIK-AFGF-DNLRK 115 VK+ +V N+ + + L + + D + Sbjct: 80 RGRMVQVKVQLMVRGTNNENLARFHSPLVESTLLATFASATVEQLRTPSGRVELRDKATE 139 Query: 116 KIKEDLNSRLGSQFISEVLIDELN 139 IK + +G I VL + Sbjct: 140 DIKAAMTQVVGEPVIERVLFTDFV 163 >gi|15642126|ref|NP_231758.1| flagellar basal body-associated protein FliL [Vibrio cholerae O1 biovar El Tor str. N16961] gi|147673204|ref|YP_001217649.1| flagellar basal body-associated protein FliL [Vibrio cholerae O395] gi|153803036|ref|ZP_01957622.1| flagellar protein FliL, putative [Vibrio cholerae MZO-3] gi|153818970|ref|ZP_01971637.1| flagellar protein FliL, putative [Vibrio cholerae NCTC 8457] gi|153822902|ref|ZP_01975569.1| flagellar protein FliL, putative [Vibrio cholerae B33] gi|153828598|ref|ZP_01981265.1| putative flagellar protein FliL [Vibrio cholerae 623-39] gi|227082252|ref|YP_002810803.1| putative flagellar protein FliL [Vibrio cholerae M66-2] gi|229507788|ref|ZP_04397293.1| flagellar biosynthesis protein FliL [Vibrio cholerae BX 330286] gi|229511975|ref|ZP_04401454.1| flagellar biosynthesis protein FliL [Vibrio cholerae B33] gi|229519111|ref|ZP_04408554.1| flagellar biosynthesis protein FliL [Vibrio cholerae RC9] gi|229522080|ref|ZP_04411497.1| flagellar biosynthesis protein FliL [Vibrio cholerae TM 11079-80] gi|229524129|ref|ZP_04413534.1| flagellar biosynthesis protein FliL [Vibrio cholerae bv. albensis VL426] gi|229607333|ref|YP_002877981.1| flagellar basal body-associated protein FliL [Vibrio cholerae MJ-1236] gi|254849212|ref|ZP_05238562.1| flagellar basal body-associated protein FliL [Vibrio cholerae MO10] gi|255745134|ref|ZP_05419083.1| flagellar biosynthesis protein FliL [Vibrio cholera CIRS 101] gi|262153476|ref|ZP_06028606.1| flagellar biosynthesis protein FliL [Vibrio cholerae INDRE 91/1] gi|262167486|ref|ZP_06035192.1| flagellar biosynthesis protein FliL [Vibrio cholerae RC27] gi|297582025|ref|ZP_06943944.1| flagellar basal body-associated protein FliL [Vibrio cholerae RC385] gi|298497851|ref|ZP_07007658.1| flagellar basal body-associated protein FliL [Vibrio cholerae MAK 757] gi|9656677|gb|AAF95272.1| flagellar protein FliL, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|124121434|gb|EAY40177.1| flagellar protein FliL, putative [Vibrio cholerae MZO-3] gi|126510465|gb|EAZ73059.1| flagellar protein FliL, putative [Vibrio cholerae NCTC 8457] gi|126519598|gb|EAZ76821.1| flagellar protein FliL, putative [Vibrio cholerae B33] gi|146315087|gb|ABQ19626.1| putative flagellar protein FliL [Vibrio cholerae O395] gi|148875869|gb|EDL74004.1| putative flagellar protein FliL [Vibrio cholerae 623-39] gi|227010140|gb|ACP06352.1| putative flagellar protein FliL [Vibrio cholerae M66-2] gi|227014023|gb|ACP10233.1| putative flagellar protein FliL [Vibrio cholerae O395] gi|229337710|gb|EEO02727.1| flagellar biosynthesis protein FliL [Vibrio cholerae bv. albensis VL426] gi|229341005|gb|EEO06010.1| flagellar biosynthesis protein FliL [Vibrio cholerae TM 11079-80] gi|229343800|gb|EEO08775.1| flagellar biosynthesis protein FliL [Vibrio cholerae RC9] gi|229351940|gb|EEO16881.1| flagellar biosynthesis protein FliL [Vibrio cholerae B33] gi|229355293|gb|EEO20214.1| flagellar biosynthesis protein FliL [Vibrio cholerae BX 330286] gi|229369988|gb|ACQ60411.1| flagellar biosynthesis protein FliL [Vibrio cholerae MJ-1236] gi|254844917|gb|EET23331.1| flagellar basal body-associated protein FliL [Vibrio cholerae MO10] gi|255736964|gb|EET92360.1| flagellar biosynthesis protein FliL [Vibrio cholera CIRS 101] gi|262024058|gb|EEY42753.1| flagellar biosynthesis protein FliL [Vibrio cholerae RC27] gi|262030713|gb|EEY49347.1| flagellar biosynthesis protein FliL [Vibrio cholerae INDRE 91/1] gi|297533720|gb|EFH72562.1| flagellar basal body-associated protein FliL [Vibrio cholerae RC385] gi|297542184|gb|EFH78234.1| flagellar basal body-associated protein FliL [Vibrio cholerae MAK 757] Length = 167 Score = 81.3 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 15/146 (10%), Positives = 38/146 (26%), Gaps = 10/146 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPP-----LAIKNTNIIKSELVSIPSVSN 58 + + + + + + + D + + + + +V+ Sbjct: 20 IIIAAVVLLAGGGGAAFFMMGSGGDEAAADAEQKTEQVAAPTDPVSYVNIAQPFVFNVTG 79 Query: 59 GVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIK-AFGF-DNL 113 +K+ +V + Y + L + + D Sbjct: 80 DAKDRLVQIKVQLMVRGSENENLARYHSPLVESSLLATFASATVEQLRTPNGRIELRDKA 139 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELN 139 IK LN +G I +VL + Sbjct: 140 TDDIKAALNQAVGKPVIEKVLFTDFV 165 >gi|262393594|ref|YP_003285448.1| flagellar biosynthesis protein FliL [Vibrio sp. Ex25] gi|262337188|gb|ACY50983.1| flagellar biosynthesis protein FliL [Vibrio sp. Ex25] Length = 167 Score = 81.3 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 16/148 (10%), Positives = 41/148 (27%), Gaps = 10/148 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVEN-----HVPPLAIKNTNIIKSELVSIPSV 56 L + + + ++ + + S + + + +V Sbjct: 18 LLIIIIAVVVLLLGGGAAAFFLMGSDEPAQAEASQQVQAKASDASPIAYVNLPQAFVFNV 77 Query: 57 SNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQI-KAFGF-D 111 + +K +V + + Y + L + + + D Sbjct: 78 TGDRRDRLVQIKAQLMVRGAENEELARYHSPLIESSLLSTFASATVDQLRSPTGRVELRD 137 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDELN 139 + IK LN+ +G I +VL + Sbjct: 138 RASEDIKAALNAAVGKPVIEKVLFTDFV 165 >gi|254510615|ref|ZP_05122682.1| flagellar basal body-associated protein FliL [Rhodobacteraceae bacterium KLH11] gi|221534326|gb|EEE37314.1| flagellar basal body-associated protein FliL [Rhodobacteraceae bacterium KLH11] Length = 176 Score = 81.3 bits (199), Expect = 5e-14, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 48/148 (32%), Gaps = 13/148 (8%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLA-----------IKNTNIIKSELV 51 K L G+++++V + Y + + V A + + + V Sbjct: 29 KGLVLGLFLALVGGVGGYFITASGLLPFANQEVAKDADKKGEGASVKGLPDVAFVDLPPV 88 Query: 52 SIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFD 111 I ++ F +L + + ++ D L + L + D + Sbjct: 89 IISVNTSDSRHLKFHAQLEVNAGYTADIEKMQPRIMDVLNSYLRAVELTDLE--DSLALV 146 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDELN 139 +R + + +G + +VL+ E Sbjct: 147 RIRGHLLRRIGIVVGEGRVRDVLVMEFV 174 >gi|229528861|ref|ZP_04418251.1| flagellar biosynthesis protein FliL [Vibrio cholerae 12129(1)] gi|229332635|gb|EEN98121.1| flagellar biosynthesis protein FliL [Vibrio cholerae 12129(1)] gi|327484655|gb|AEA79062.1| Flagellar biosynthesis protein FliL [Vibrio cholerae LMA3894-4] Length = 167 Score = 81.3 bits (199), Expect = 6e-14, Method: Composition-based stats. Identities = 15/146 (10%), Positives = 38/146 (26%), Gaps = 10/146 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPP-----LAIKNTNIIKSELVSIPSVSN 58 + + + + + + + D + + + + +V+ Sbjct: 20 IIIAAVVLLAGGGGAAFFMMGSGDDEAAADAEQKTEQVAAPTDPVSYVNIAQPFVFNVTG 79 Query: 59 GVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIK-AFGF-DNL 113 +K+ +V + Y + L + + D Sbjct: 80 DAKDRLVQIKVQLMVRGSENENLARYHSPLVESSLLATFASATVEQLRTPNGRIELRDKA 139 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELN 139 IK LN +G I +VL + Sbjct: 140 TDDIKAALNQAVGKPVIEKVLFTDFV 165 >gi|121586822|ref|ZP_01676604.1| flagellar protein FliL, putative [Vibrio cholerae 2740-80] gi|121727185|ref|ZP_01680352.1| flagellar protein FliL, putative [Vibrio cholerae V52] gi|153213254|ref|ZP_01948666.1| flagellar protein FliL, putative [Vibrio cholerae 1587] gi|153825619|ref|ZP_01978286.1| flagellar protein FliL, putative [Vibrio cholerae MZO-2] gi|254291363|ref|ZP_04962156.1| flagellar protein FliL, putative [Vibrio cholerae AM-19226] gi|262191376|ref|ZP_06049566.1| flagellar biosynthesis protein FliL [Vibrio cholerae CT 5369-93] gi|121548989|gb|EAX59028.1| flagellar protein FliL, putative [Vibrio cholerae 2740-80] gi|121630430|gb|EAX62823.1| flagellar protein FliL, putative [Vibrio cholerae V52] gi|124116054|gb|EAY34874.1| flagellar protein FliL, putative [Vibrio cholerae 1587] gi|149740770|gb|EDM54869.1| flagellar protein FliL, putative [Vibrio cholerae MZO-2] gi|150422693|gb|EDN14647.1| flagellar protein FliL, putative [Vibrio cholerae AM-19226] gi|262032751|gb|EEY51299.1| flagellar biosynthesis protein FliL [Vibrio cholerae CT 5369-93] Length = 167 Score = 80.9 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 14/146 (9%), Positives = 38/146 (26%), Gaps = 10/146 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPP-----LAIKNTNIIKSELVSIPSVSN 58 + + + + + + + + + + + + +V+ Sbjct: 20 IIIAAVVLLAGGGGAAFFMMGSGGEEAAADAEQKTEQVAAPTDPVSYVNIAQPFVFNVTG 79 Query: 59 GVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIK-AFGF-DNL 113 +K+ +V + Y + L + + D Sbjct: 80 DAKDRLVQIKVQLMVRGSENENLARYHSPLVESSLLATFASATVEQLRTPNGRIELRDKA 139 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELN 139 IK LN +G I +VL + Sbjct: 140 TDDIKAALNQAVGKPVIEKVLFTDFV 165 >gi|298530628|ref|ZP_07018030.1| flagellar basal body-associated protein FliL [Desulfonatronospira thiodismutans ASO3-1] gi|298510002|gb|EFI33906.1| flagellar basal body-associated protein FliL [Desulfonatronospira thiodismutans ASO3-1] Length = 167 Score = 80.9 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 48/133 (36%), Gaps = 12/133 (9%) Query: 16 LISFYMLFLRSMDTMVENHVPPLAIK------NTNIIKSELVSIPSVSNGVLQAYFLVKL 69 + + + M+ P A + +T +++ E + ++++ + + Y L Sbjct: 36 GAAGFFGYNYFMEQRDSEPDDPDAPEQDERPRDTVMVELEPFVV-NLADPLGRRYLRTTL 94 Query: 70 SFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLG 126 + + L + D + LLS D + NLR +I E +N +G Sbjct: 95 EVEAVNRSAANELEDQRPQVRDAILLLLSSKTFEDLRTMDRK--INLRNEIVERINQVIG 152 Query: 127 SQFISEVLIDELN 139 + +V E Sbjct: 153 QNKVYKVYFTEFV 165 >gi|77464891|ref|YP_354395.1| flagellar synthesis protein [Rhodobacter sphaeroides 2.4.1] gi|126463733|ref|YP_001044847.1| flagellar basal body-associated protein FliL [Rhodobacter sphaeroides ATCC 17029] gi|77389309|gb|ABA80494.1| possible flagellar synthesis protein [Rhodobacter sphaeroides 2.4.1] gi|126105397|gb|ABN78075.1| flagellar basal body-associated protein FliL [Rhodobacter sphaeroides ATCC 17029] Length = 162 Score = 80.9 bits (198), Expect = 6e-14, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 41/144 (28%), Gaps = 12/144 (8%) Query: 5 LFSGIWISVVTLISFYML-------FLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS 57 L G+ +++V + H P A+ + + + + I + Sbjct: 20 LILGVVLALVLGGGGFYATWSGLILGASGGHEAETAHEAPAALPDIAFVPIDPIVIS-LG 78 Query: 58 NGVLQAYFLVKLSFIVNDSQERS--YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 G ++ V + L D + L + A LR Sbjct: 79 RGSDLSHLRFAAQLEVAKANAAEVTMLMPRIVDVINGYLRAVAVSRLEDPTA--LVELRA 136 Query: 116 KIKEDLNSRLGSQFISEVLIDELN 139 ++ + G + ++L+ E Sbjct: 137 QMLRRIQIVTGEGRVRDLLVTEFV 160 >gi|261209863|ref|ZP_05924164.1| flagellar biosynthesis protein FliL [Vibrio sp. RC341] gi|260841049|gb|EEX67574.1| flagellar biosynthesis protein FliL [Vibrio sp. RC341] Length = 167 Score = 80.9 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 14/146 (9%), Positives = 38/146 (26%), Gaps = 10/146 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPL-----AIKNTNIIKSELVSIPSVSN 58 + + + + + + + + + + + +V+ Sbjct: 20 IIIAAVVLLAGGGGAAFFMMGSGGEEAAAQAEQKTEQAATPADPVSYVNIAQPFVFNVTG 79 Query: 59 GVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIK-AFGF-DNL 113 +K+ +V + Y + L + + D Sbjct: 80 DAKDRMVQIKVQLMVRGSENENLARYHSPLVESTLLATFASATVEQLRTPNGRIELRDKA 139 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELN 139 + IK LN +G I +VL + Sbjct: 140 TEDIKAALNQAVGKPIIEKVLFTDFV 165 >gi|163738047|ref|ZP_02145463.1| flagellar basal body-associated protein FliL [Phaeobacter gallaeciensis BS107] gi|163742557|ref|ZP_02149943.1| flagellar basal body-associated protein FliL [Phaeobacter gallaeciensis 2.10] gi|161384142|gb|EDQ08525.1| flagellar basal body-associated protein FliL [Phaeobacter gallaeciensis 2.10] gi|161388663|gb|EDQ13016.1| flagellar basal body-associated protein FliL [Phaeobacter gallaeciensis BS107] Length = 174 Score = 80.9 bits (198), Expect = 7e-14, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 48/154 (31%), Gaps = 21/154 (13%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPL------------------AIKNTNII 46 L G+ +++V + + ++ P I N I Sbjct: 21 LIIGVVLALVGAGGGFFAVQSGLLPFGQSAAPEGVDATEVAPEGVDNGESAEDIANLAFI 80 Query: 47 KSELVSIPS-VSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQI 105 + E + I ++G+ F +L + E + D L + L + D Sbjct: 81 EMEPIVITLRKASGLKHLRFRSQLEVDLAHRAEVEKILPRVVDVLNSYLRALELEDLTDP 140 Query: 106 KAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 LR ++ +N G + ++LI + Sbjct: 141 --MALPKLRAQMLRRINIAAGQGRVRDLLIMDFV 172 >gi|229513778|ref|ZP_04403240.1| flagellar biosynthesis protein FliL [Vibrio cholerae TMA 21] gi|229348959|gb|EEO13916.1| flagellar biosynthesis protein FliL [Vibrio cholerae TMA 21] Length = 167 Score = 80.5 bits (197), Expect = 9e-14, Method: Composition-based stats. Identities = 16/146 (10%), Positives = 39/146 (26%), Gaps = 10/146 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPP-----LAIKNTNIIKSELVSIPSVSN 58 + + + + + + + D V + + + + +V+ Sbjct: 20 IIIAAVVLLAGGGGAAFFMMGSGDDEAVADAEQKTEQVAAPTDPVSYVNIAQPFVFNVTG 79 Query: 59 GVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIK-AFGF-DNL 113 +K+ +V + Y + L + + D Sbjct: 80 DAKDRLVQIKVQLMVRGSENENLARYHSPLVESSLLATFASATVEQLRTPNGRIELRDKA 139 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELN 139 IK LN +G I +VL + Sbjct: 140 TDDIKAALNQAVGKPVIEKVLFTDFV 165 >gi|262404473|ref|ZP_06081028.1| flagellar biosynthesis protein FliL [Vibrio sp. RC586] gi|262349505|gb|EEY98643.1| flagellar biosynthesis protein FliL [Vibrio sp. RC586] Length = 167 Score = 80.5 bits (197), Expect = 9e-14, Method: Composition-based stats. Identities = 14/146 (9%), Positives = 36/146 (24%), Gaps = 10/146 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPL-----AIKNTNIIKSELVSIPSVSN 58 + + + + + + + + + + +V+ Sbjct: 20 IIIAAVVLLAGGGGAAFFMMGSGDGEAAAQAEQKTEQAATPADPVSYVNIAQPFVFNVTG 79 Query: 59 GVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIK-AFGF-DNL 113 +K+ +V + Y + L + + D Sbjct: 80 DEKDRLVQIKVQLMVRGSENENLARYHSPLVESTLLATFASATVEQLRTPNGRIELRDKA 139 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELN 139 IK LN +G I +VL + Sbjct: 140 TDDIKAALNQAVGKPIIEKVLFTDFV 165 >gi|28899017|ref|NP_798622.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus RIMD 2210633] gi|153836968|ref|ZP_01989635.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus AQ3810] gi|153840526|ref|ZP_01993193.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus AQ3810] gi|153841426|ref|ZP_01993403.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus AQ3810] gi|260365237|ref|ZP_05777794.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus K5030] gi|260878787|ref|ZP_05891142.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus AN-5034] gi|260897382|ref|ZP_05905878.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus Peru-466] gi|260899941|ref|ZP_05908336.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus AQ4037] gi|4322003|gb|AAD15906.1| polar flagellar protein FliL [Vibrio parahaemolyticus] gi|28807236|dbj|BAC60506.1| polar flagellar protein FliL [Vibrio parahaemolyticus RIMD 2210633] gi|149745479|gb|EDM56730.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus AQ3810] gi|149745810|gb|EDM56940.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus AQ3810] gi|149749741|gb|EDM60486.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus AQ3810] gi|308088284|gb|EFO37979.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus Peru-466] gi|308094199|gb|EFO43894.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus AN-5034] gi|308107277|gb|EFO44817.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus AQ4037] gi|308115425|gb|EFO52965.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus K5030] gi|328474446|gb|EGF45251.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus 10329] Length = 167 Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 42/148 (28%), Gaps = 10/148 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVP-----PLAIKNTNIIKSELVSIPSV 56 L + + + + + + S D+ A + I +V Sbjct: 18 LLIIIIAVVVLLGGGGAAAFFLMGSDDSAQAAEAESQQTQAAAANPIAYVNLPQPFIFNV 77 Query: 57 SNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQI-KAFGF-D 111 + +K +V + Q Y + L + + + D Sbjct: 78 TGDRRDRLVQIKAQLMVRGSENEQLARYHSPLVESSLLSTFASATVEQLRSPTGRVELRD 137 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDELN 139 + IK LN+ +G I +VL + Sbjct: 138 RASEDIKAALNAAVGKPVIEKVLFTDFV 165 >gi|163801851|ref|ZP_02195748.1| flagellar basal body-associated protein FliL [Vibrio sp. AND4] gi|159174359|gb|EDP59163.1| flagellar basal body-associated protein FliL [Vibrio sp. AND4] Length = 166 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 41/147 (27%), Gaps = 9/147 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHV----PPLAIKNTNIIKSELVSIPSVS 57 L + + + +V + + S ++ P + I +V+ Sbjct: 18 LLIIIIAVVVLLVGGGAAAFFLMGSDESAQPEQAEQTQPQTTAAPIAYVNIAQPFIFNVT 77 Query: 58 NGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQI-KAFGF-DN 112 +K +V + Q Y + L + + + Sbjct: 78 GDRRDRLVQIKAQLMVRGGENEQLARYHSPLIESSLLSTFASATAEQLRSPTGRVELRER 137 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELN 139 IK L++ +G I +VL + Sbjct: 138 ASDDIKAALSTAVGQPVIEKVLFTDFV 164 >gi|27365286|ref|NP_760814.1| flagellar basal body-associated protein FliL [Vibrio vulnificus CMCP6] gi|37680659|ref|NP_935268.1| flagellar basal body-associated protein FliL [Vibrio vulnificus YJ016] gi|320155670|ref|YP_004188049.1| flagellar biosynthesis protein FliL [Vibrio vulnificus MO6-24/O] gi|27361433|gb|AAO10341.1| Flagellar biosynthesis protein fliL [Vibrio vulnificus CMCP6] gi|37199408|dbj|BAC95239.1| flagellar basal body-associated protein FliL [Vibrio vulnificus YJ016] gi|319930982|gb|ADV85846.1| flagellar biosynthesis protein FliL [Vibrio vulnificus MO6-24/O] Length = 165 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 15/146 (10%), Positives = 38/146 (26%), Gaps = 8/146 (5%) Query: 2 LKFLFSGIWISVV-TLISFYMLFLR--SMDTMVENHVPPLAIKNTNIIKSELVSIPSVSN 58 L + + + + + + L + + + + +V+ Sbjct: 18 LLIIIIAVVVLLAGGGGAAFFLMGSDPAEEEAAAQVQAQPVEAPIAYVNIAQPFVFNVTG 77 Query: 59 GVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIK--AFGFDNL 113 +K+ +V + Y + L + + + D Sbjct: 78 DNRNRMVQIKVQLMVRGTENENLARYHSPLIESSLLSTFASATVEQLRSPTGRTELRDKA 137 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELN 139 IK L +G I +VL + Sbjct: 138 TDDIKAALTKSVGQPVIEKVLFTDFV 163 >gi|254466464|ref|ZP_05079875.1| flagellar basal body-associated protein FliL [Rhodobacterales bacterium Y4I] gi|206687372|gb|EDZ47854.1| flagellar basal body-associated protein FliL [Rhodobacterales bacterium Y4I] Length = 174 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 19/154 (12%), Positives = 43/154 (27%), Gaps = 21/154 (13%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENH------------------VPPLAIKNTNII 46 L G+ +++ + + + I N I Sbjct: 21 LIIGVVLALAGAGGGFFAVQSGLLPFGQKAAPEPAHAAEEAPEGVDTGETAEDIANLAFI 80 Query: 47 KSELVSIPSVSNGVLQAY-FLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQI 105 + + + I ++ F +L + E + D L + L + D Sbjct: 81 EMDPIVITLSKASGIKHLRFRAQLEVDLAHQAEVEKILPRVVDVLNSYLRALELEDLTDP 140 Query: 106 KAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 LR ++ +N G + ++LI + Sbjct: 141 --MALPKLRAQMLRRINIATGQGRVRDLLIMDFV 172 >gi|91223551|ref|ZP_01258816.1| flagellar basal body-associated protein FliL [Vibrio alginolyticus 12G01] gi|91191637|gb|EAS77901.1| flagellar basal body-associated protein FliL [Vibrio alginolyticus 12G01] Length = 167 Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats. Identities = 16/148 (10%), Positives = 42/148 (28%), Gaps = 10/148 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVEN-----HVPPLAIKNTNIIKSELVSIPSV 56 L + + + ++ + + S + V + + +V Sbjct: 18 LLIIIIAVVVLLLGGGAAAFFLMGSDEPAQAESSQQAQVKASDAAPIAYVNLPQAFVFNV 77 Query: 57 SNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQI-KAFGF-D 111 + +K +V + + Y + + + + + D Sbjct: 78 TGDSRDRLVQIKAQLMVRGAENEELARYHSPLIESSMLSTFASATVDQLRSPTGRVELRD 137 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDELN 139 + IK LN+ +G I +VL + Sbjct: 138 RASEDIKAALNAAVGKPVIEKVLFTDFV 165 >gi|260767700|ref|ZP_05876635.1| flagellar biosynthesis protein FliL [Vibrio furnissii CIP 102972] gi|260617209|gb|EEX42393.1| flagellar biosynthesis protein FliL [Vibrio furnissii CIP 102972] gi|315179468|gb|ADT86382.1| flagellar basal body-associated protein FliL [Vibrio furnissii NCTC 11218] Length = 165 Score = 78.2 bits (191), Expect = 4e-13, Method: Composition-based stats. Identities = 14/144 (9%), Positives = 37/144 (25%), Gaps = 8/144 (5%) Query: 4 FLFSGIWISVVTLISFYMLFLR---SMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 + + + + + + + L + + + + + +VS Sbjct: 20 IIVAAVVLLLGGGGAAFFLMGSDSGADAKAETTQEAAAPVDPVSYVNIAQPFVFNVSGDT 79 Query: 61 LQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQ-IKAFGF-DNLRK 115 +K+ +V + Y + L + + D Sbjct: 80 RDRMVQIKVQLMVRGSKNEGLARYHSPLVESTLLATFASATVEQLRSATGRVELRDKATD 139 Query: 116 KIKEDLNSRLGSQFISEVLIDELN 139 IK + +G I VL + Sbjct: 140 DIKAAMTKVVGQPVIERVLFTDFV 163 >gi|254485967|ref|ZP_05099172.1| flagellar basal body-associated protein FliL [Roseobacter sp. GAI101] gi|214042836|gb|EEB83474.1| flagellar basal body-associated protein FliL [Roseobacter sp. GAI101] Length = 161 Score = 77.4 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 44/144 (30%), Gaps = 11/144 (7%) Query: 5 LFSGIWISVVTLISFYMLFLRSM------DTMVENHVPPLAIKNTNIIKSELVSIPSVSN 58 L + +++V + L + +T V P I + + + + I + Sbjct: 20 LILSLVLALVGGGGGFYLSWSGLIMGDKPETDVAETDGPAPIGDFVYVPIDPLVIS-LRQ 78 Query: 59 GVLQAYFLVKLSFIVNDSQER--SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 + + V L TD L L + D LR + Sbjct: 79 PAQSKHLRFRAQMEVPSRYVADVEKLLPRVTDVLNGYLRAVKVEDLESPAI--LVRLRSQ 136 Query: 117 IKEDLNSRLGSQFISEVLIDELNY 140 + + +G + ++LI E + Sbjct: 137 MLHRIEVVVGPDRVKDLLIMEFVF 160 >gi|206891032|ref|YP_002249869.1| flagellar basal body-associated protein FliL [Thermodesulfovibrio yellowstonii DSM 11347] gi|206742970|gb|ACI22027.1| flagellar basal body-associated protein FliL [Thermodesulfovibrio yellowstonii DSM 11347] Length = 170 Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 43/128 (33%), Gaps = 6/128 (4%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN 74 +++ L + + + E + ++ + Y V + ++ Sbjct: 44 AGGAYFFLTGKGAEHGKGSATKDSKEVQGINFALEPFVV-NLMDQSGTKYLKVSVQIELS 102 Query: 75 DSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFIS 131 D++ K D + TLL+ + + + L+ +IK+ N LG + Sbjct: 103 DAKLAEQAKNKTPQIRDAIITLLTNKTSDELITPEGKLL--LKDEIKQRANQILGEGTVI 160 Query: 132 EVLIDELN 139 V + + Sbjct: 161 NVYLTDFV 168 >gi|83589635|ref|YP_429644.1| flagellar basal body-associated protein FliL [Moorella thermoacetica ATCC 39073] gi|83572549|gb|ABC19101.1| Flagellar basal body-associated protein FliL [Moorella thermoacetica ATCC 39073] Length = 159 Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 16/128 (12%), Positives = 45/128 (35%), Gaps = 9/128 (7%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSE-LVSIPSVSNGVLQAYFLVKLSFIV 73 + Y F + + + K + ++++ L Y K++ Sbjct: 34 SGGYVYYFFFGGNSRGMAAAPTGNNPEPAALQKLSLDSIVVNLADPGLHRYLRAKITMEY 93 Query: 74 NDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFI 130 +D + + L + D + ++L D + L++++ +NS+L + + Sbjct: 94 SDPKLATELNDKLYRVRDTIISVLRSKKTDDLQNEE-----ALKRELLTAINSQLTAGQV 148 Query: 131 SEVLIDEL 138 + +E Sbjct: 149 RALYFEEF 156 >gi|308273525|emb|CBX30127.1| hypothetical protein N47_D29360 [uncultured Desulfobacterium sp.] Length = 171 Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 25/151 (16%), Positives = 54/151 (35%), Gaps = 14/151 (9%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLR---------SMDTMVENHVPPLAIKNTNIIKSELV 51 MLK++ + VV + F+ + + E H + ++ I E Sbjct: 21 MLKWVIIACSVLVVGIAGFFGWSMFMKKGASGDSHKAEVSETHGEKKSEESRGIFPLESF 80 Query: 52 SIPSVSNGVLQAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAF 108 + + G + Y V + V D ++ K D + LLS + ++ Sbjct: 81 IVNLMDTGTGKKYLKVTMELEVMDEIGKKKVEAYKTQLKDTILMLLSSRSYEEINTVEGK 140 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 +L++ + +N +G +S++ E Sbjct: 141 L--DLKQALLARINQTMGENAVSKIYFTEFV 169 >gi|83720504|ref|YP_440586.1| flagellar basal body-associated protein FliL [Burkholderia thailandensis E264] gi|83654329|gb|ABC38392.1| flagellar protein FliL [Burkholderia thailandensis E264] Length = 180 Score = 77.0 bits (188), Expect = 1e-12, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 45/145 (31%), Gaps = 10/145 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + FL GI + Y + L+ PP + E +++ S+ + Sbjct: 37 VLFLLIGIVAAAAAAGGTYFVLLKEGARGSAPSAPP-PLAVPAFFPLEPLTVNLQSDDGV 95 Query: 62 QAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 Q Y V LS + D + + Y + LS ++ L ++K Sbjct: 96 QHYLRVGLSLKLTDPKAQEYLTQHMPELRSRILLALSNKHPEQLATLEGK--RALADELK 153 Query: 119 EDLNSRLGSQ----FISEVLIDELN 139 + + +VL E Sbjct: 154 TLIEQPTQPGNQSARVDDVLFTEFV 178 >gi|258621110|ref|ZP_05716144.1| flagellar basal body-associated protein [Vibrio mimicus VM573] gi|258626184|ref|ZP_05721032.1| flagellar basal body-associated protein [Vibrio mimicus VM603] gi|262170886|ref|ZP_06038564.1| flagellar biosynthesis protein FliL [Vibrio mimicus MB-451] gi|258581539|gb|EEW06440.1| flagellar basal body-associated protein [Vibrio mimicus VM603] gi|258586498|gb|EEW11213.1| flagellar basal body-associated protein [Vibrio mimicus VM573] gi|261891962|gb|EEY37948.1| flagellar biosynthesis protein FliL [Vibrio mimicus MB-451] Length = 166 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 14/146 (9%), Positives = 37/146 (25%), Gaps = 10/146 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPP-----LAIKNTNIIKSELVSIPSVSN 58 + + + + + + + + + + +V+ Sbjct: 19 IIIAAVVLLAGGGGAAFFMMGSGDGEAAAQAEQKAEQAATPADPVSYVNIAQPFVFNVTG 78 Query: 59 GVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIK-AFGF-DNL 113 +K+ +V + Y + L + + D Sbjct: 79 DDRDRLVQIKVQLMVRGSENENLARYHSPLVESSLLATFASATVEQLRTPSGRIELRDKA 138 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELN 139 + IK LN +G I +VL + Sbjct: 139 TEDIKAALNQAVGKPVIEKVLFTDFV 164 >gi|261252328|ref|ZP_05944901.1| flagellar biosynthesis protein FliL [Vibrio orientalis CIP 102891] gi|260935719|gb|EEX91708.1| flagellar biosynthesis protein FliL [Vibrio orientalis CIP 102891] Length = 165 Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 38/147 (25%), Gaps = 9/147 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPP----LAIKNTNIIKSELVSIPSVS 57 L + + +V + S D+ + + +V+ Sbjct: 17 LLIIIIAAVVLLVGGGGAAFFLMGSDDSAETQQATQQEVVTPTDPVAYVNIAQPFLFNVT 76 Query: 58 NGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFV--QIKAFGFDN 112 +K+ +V + Y + L + + + + D Sbjct: 77 GDKKDRLVQIKVQLMVRGSENENLARYHSPLIESSLLSTFASATVDQLRTVNGRVELRDK 136 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELN 139 IK LN +G I VL + Sbjct: 137 ATDDIKASLNRAVGQPVIERVLFTDFV 163 >gi|262166228|ref|ZP_06033965.1| flagellar biosynthesis protein FliL [Vibrio mimicus VM223] gi|262025944|gb|EEY44612.1| flagellar biosynthesis protein FliL [Vibrio mimicus VM223] Length = 166 Score = 76.2 bits (186), Expect = 1e-12, Method: Composition-based stats. Identities = 14/146 (9%), Positives = 37/146 (25%), Gaps = 10/146 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPP-----LAIKNTNIIKSELVSIPSVSN 58 + + + + + + + + + + +V+ Sbjct: 19 IIIAAVVLLAGGGGAAFFMMGSGDGEAAAQAEQKAEQAATPADPVSYVNIAQPFVFNVTG 78 Query: 59 GVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIK-AFGF-DNL 113 +K+ +V + Y + L + + D Sbjct: 79 DDRDRLVQIKVQLMVRGSENENLARYHSPLVESTLLATFASATVEQLRTPNGRIELRDKA 138 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELN 139 + IK LN +G I +VL + Sbjct: 139 TEDIKAALNQAVGKPIIEKVLFTDFV 164 >gi|167617379|ref|ZP_02386010.1| flagellar basal body-associated protein FliL [Burkholderia thailandensis Bt4] Length = 165 Score = 76.2 bits (186), Expect = 2e-12, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 45/145 (31%), Gaps = 10/145 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + FL GI + Y + L+ PP + E +++ S+ + Sbjct: 22 VLFLLIGIVAAAAAAGGTYFVLLKEGARGSAPSAPP-PLAVPAFFPLEPLTVNLQSDDGV 80 Query: 62 QAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 Q Y V LS + D + + Y + LS ++ L ++K Sbjct: 81 QHYLRVGLSLKLTDPKAQEYLTQHMPELRSRILLALSNKHPEQLATLEGK--RALADELK 138 Query: 119 EDLNSRLGSQ----FISEVLIDELN 139 + + +VL E Sbjct: 139 TLIEQPTQPGNQSARVDDVLFTEFV 163 >gi|269961626|ref|ZP_06175988.1| flagellar basal body-associated protein [Vibrio harveyi 1DA3] gi|269833667|gb|EEZ87764.1| flagellar basal body-associated protein [Vibrio harveyi 1DA3] Length = 166 Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 41/147 (27%), Gaps = 9/147 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK----NTNIIKSELVSIPSVS 57 L + + + ++ + + S + + + I +V+ Sbjct: 18 LLIIIIAVVVLLIGGGAAAFFLMGSDEPAQAAQTEQAQAQTAAAPIAYVNIAQPFIFNVT 77 Query: 58 NGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIK--AFGFDN 112 +K +V + Q Y + L + + + D Sbjct: 78 GDRRDRLVQIKAQLMVRGSENEQLARYHSPLIESSLLSTFASATVEQLRSPTGRTELRDR 137 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELN 139 IK LN+ +G I +VL + Sbjct: 138 ASDDIKAALNAAVGKPVIEKVLFTDFV 164 >gi|89056681|ref|YP_512132.1| hypothetical protein Jann_4190 [Jannaschia sp. CCS1] gi|88866230|gb|ABD57107.1| hypothetical protein Jann_4190 [Jannaschia sp. CCS1] Length = 171 Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 22/116 (18%), Positives = 43/116 (37%), Gaps = 6/116 (5%) Query: 30 MVENHVPPLAIKNTNIIKSE-LVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY--LKEIA 86 E A + T ++ +P V +G +++ ++ LS V+ + L+ Sbjct: 52 SGETQRVEPAGEGTEYVRINNQFVVPIVRSGAVRSLVVMSLSLEVDTGVNSAVFSLEPRL 111 Query: 87 TDYLYTLLSGPPMG---DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 D ++ D +A LR ++E S LG +VLI ++ Sbjct: 112 RDSFLRVMFAHANAGGFDGRFTEAEAMAPLRSALREAAQSVLGRGTTHDVLITDIT 167 >gi|167579273|ref|ZP_02372147.1| flagellar basal body-associated protein FliL [Burkholderia thailandensis TXDOH] Length = 165 Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats. Identities = 24/145 (16%), Positives = 44/145 (30%), Gaps = 10/145 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + FL GI + Y + L+ PP + E +++ S+ + Sbjct: 22 VLFLLIGIVAAAAAAGGTYFVLLKEGARGSAPSAPP-PLAVPAFFPLEPLTVNLQSDDGV 80 Query: 62 QAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 Q Y V LS + D + + Y + LS + L ++K Sbjct: 81 QHYLRVGLSLKLTDPKAQEYLTQHMPELRSRILLALSNKHPEQLATLDGK--RALADELK 138 Query: 119 EDLNSRLGSQ----FISEVLIDELN 139 + + +VL E Sbjct: 139 TLIEQPTQPGNQSARVDDVLFTEFV 163 >gi|221640812|ref|YP_002527074.1| Flagellar basal body-associated protein FliL [Rhodobacter sphaeroides KD131] gi|221161593|gb|ACM02573.1| Flagellar basal body-associated protein FliL [Rhodobacter sphaeroides KD131] Length = 162 Score = 74.3 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 41/144 (28%), Gaps = 12/144 (8%) Query: 5 LFSGIWISVVTLISFYML-------FLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS 57 L G+ +++V + H P A+ + + + + I + Sbjct: 20 LILGVVLALVLGGGGFYATWSGLILGASGGHEAEPAHEAPAALPDIAFVPIDPIVIS-LG 78 Query: 58 NGVLQAYFLVKLSFIVNDSQERS--YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 G ++ V + L D + L + A LR Sbjct: 79 RGSDLSHLRFAAQLEVPKANAAEVTMLMPRIVDVINGYLRAVAVSRLEDPTA--LVELRA 136 Query: 116 KIKEDLNSRLGSQFISEVLIDELN 139 ++ + G + ++L+ E Sbjct: 137 QMLRRIQIVTGEGRVRDLLVTEFV 160 >gi|84388117|ref|ZP_00991013.1| flagellar basal body-associated protein [Vibrio splendidus 12B01] gi|84377184|gb|EAP94054.1| flagellar basal body-associated protein [Vibrio splendidus 12B01] Length = 162 Score = 74.3 bits (181), Expect = 6e-12, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 44/147 (29%), Gaps = 9/147 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPL----AIKNTNIIKSELVSIPSVS 57 L + + + ++ + FL S D+ E+ P A + + + +V+ Sbjct: 14 LLIIIIAVVVLLLGIGGALFFFLGSDDSASESQSQPATAVVAAEPVMYVNIPQPFLFNVT 73 Query: 58 NGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQI-KAFGF-DN 112 +K +V + Y + L + + D Sbjct: 74 GDKKDRLVQIKAQLMVRGSKNEDLARYHSPLVESTLLATFASATVDQLRSPTGRIELRDK 133 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELN 139 + IK L +G I +VL + Sbjct: 134 ATEDIKASLAQAVGQPVIEKVLFTDFV 160 >gi|258404713|ref|YP_003197455.1| flagellar basal body-associated protein FliL [Desulfohalobium retbaense DSM 5692] gi|257796940|gb|ACV67877.1| flagellar basal body-associated protein FliL [Desulfohalobium retbaense DSM 5692] Length = 169 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 13/150 (8%), Positives = 46/150 (30%), Gaps = 15/150 (10%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNI---------IKSELVS 52 L + + +++ Y + + + ++ + ++ + Sbjct: 21 LLLIVASVFLLAAIGAGGYYIGTQWGSESEAAQENTPSSESVSFDSKGELGPLVEMDDFL 80 Query: 53 IPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFG 109 + ++++G Y ++ D + + L D + L ++ Sbjct: 81 V-NIADGEQTRYLKASITVEATDKKSQDELNKRIPQIRDVIIFHLGTKTFDQVRDLQGK- 138 Query: 110 FDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 LR ++ + LN + + + + E Sbjct: 139 -KQLRAELTKRLNGIVDQRLVQRIFFTEFV 167 >gi|163732485|ref|ZP_02139930.1| flagellar basal body-associated protein FliL [Roseobacter litoralis Och 149] gi|161393845|gb|EDQ18169.1| flagellar basal body-associated protein FliL [Roseobacter litoralis Och 149] Length = 163 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 18/145 (12%), Positives = 43/145 (29%), Gaps = 13/145 (8%) Query: 5 LFSGIWISVVTLISFYMLFLRSM--------DTMVENHVPPLAIKNTNIIKSELVSIPSV 56 L G ++++ + M + + E + + + E ++I Sbjct: 20 LIIGAVLALIGGGGGFYAASSGMIFATESKEEVVEEEKKSSSEFSDISFLPLEPMTISMP 79 Query: 57 SNGVLQAYFLVKLSFIVNDSQER--SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 G + + V + D L L + D + + LR Sbjct: 80 R-GSAYKHLRFRGELEVPKEYAEDVKKVTPRVIDVLNGYLRALQVSDIEEPAS--LTRLR 136 Query: 115 KKIKEDLNSRLGSQFISEVLIDELN 139 ++ + G ++++LI E Sbjct: 137 SQMLRRIQIVAGPGRVNDLLIMEFV 161 >gi|304316898|ref|YP_003852043.1| flagellar basal body-associated protein FliL [Thermoanaerobacterium thermosaccharolyticum DSM 571] gi|302778400|gb|ADL68959.1| flagellar basal body-associated protein FliL [Thermoanaerobacterium thermosaccharolyticum DSM 571] Length = 132 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 38/127 (29%), Gaps = 16/127 (12%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN 74 S + F + P I N + + + + V Sbjct: 16 AFGSAFFYFNY--------NSKPAKIVYYNYSPGDEFVTNLKGDD---KFIKAGVELEVY 64 Query: 75 DSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFIS 131 D + L D + +L D + G L+ +IK ++N LG+ I+ Sbjct: 65 DKNVLNELKDQNPKIRDAILQILRNKTAQDLE--GSAGQSKLQNEIKNEINKILGADKIT 122 Query: 132 EVLIDEL 138 V D+ Sbjct: 123 NVYFDDF 129 >gi|121533751|ref|ZP_01665578.1| flagellar basal body-associated protein FliL [Thermosinus carboxydivorans Nor1] gi|121307742|gb|EAX48657.1| flagellar basal body-associated protein FliL [Thermosinus carboxydivorans Nor1] Length = 156 Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats. Identities = 22/149 (14%), Positives = 48/149 (32%), Gaps = 15/149 (10%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELV---SIPSVSN 58 L + + I + +V ++ + + A + IK I ++ Sbjct: 10 LFMIIALIVVGLVLAGGVSY-YIATKVIASQTTEKKQAREPGTFIKLGDPKEGLILNIGG 68 Query: 59 GVLQAYFLVKLSFIVNDSQER-----SYLKE---IATDYLYTLLSGPPMGDFVQIKAFGF 110 Y + + V ++ D + +L + DF K Sbjct: 69 VNSGRYLKIGIILEVKPDKKAPPKEGKNPSPDEIKMLDTVIFVLRSQKVEDFEPAKQ--- 125 Query: 111 DNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + L++ IK ++N LG + + +V I Sbjct: 126 EALKELIKNEVNKALGEERVLDVYITNFV 154 >gi|126734119|ref|ZP_01749866.1| flagellar basal body-associated protein FliL [Roseobacter sp. CCS2] gi|126716985|gb|EBA13849.1| flagellar basal body-associated protein FliL [Roseobacter sp. CCS2] Length = 164 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 17/145 (11%), Positives = 40/145 (27%), Gaps = 12/145 (8%) Query: 5 LFSGIWISVVTLISFYMLFLRS---MDTMVENHVPPLAIK------NTNIIKSELVSIPS 55 L G ++++ + + A + + + + + I Sbjct: 20 LVFGFVLAILGAGGGFYAVQSGVLSGSDSSDAAEKESASETSNTELDVAFVAIDPLVISL 79 Query: 56 VSNGVLQAY-FLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 G F +L + + E ++ D L L + LR Sbjct: 80 PGQGGRDHLRFAAQLEVRPDHAAEVEAIRPRIVDVLNGYLRAIDIASLEDPAT--LPRLR 137 Query: 115 KKIKEDLNSRLGSQFISEVLIDELN 139 ++ + G + ++LI E Sbjct: 138 AQMLRRIQVVTGPGRVDDILIMEFV 162 >gi|297569681|ref|YP_003691025.1| flagellar basal body-associated protein FliL [Desulfurivibrio alkaliphilus AHT2] gi|296925596|gb|ADH86406.1| flagellar basal body-associated protein FliL [Desulfurivibrio alkaliphilus AHT2] Length = 157 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 16/141 (11%), Positives = 48/141 (34%), Gaps = 10/141 (7%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 L F+ G+ + ++ F+ E+ PL + E + ++++ Sbjct: 22 LFFIIVGVALLLLAGGGFFTYTTFLAPPHDEDAREPL----GEMFALEPFVV-NLADPTG 76 Query: 62 QAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 + Y V+++ + + + D + T+L+ + + + +R ++ Sbjct: 77 KRYLKVQIALELESERAVENAKRAEPKLRDTVITMLTALSFEEVMTPEGK--IRIRDELL 134 Query: 119 EDLNSRLGSQFISEVLIDELN 139 N + + + E Sbjct: 135 GRFNVVMRPDRVRNIYFTEFV 155 >gi|332559790|ref|ZP_08414112.1| FliL2 [Rhodobacter sphaeroides WS8N] gi|332277502|gb|EGJ22817.1| FliL2 [Rhodobacter sphaeroides WS8N] Length = 162 Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 41/144 (28%), Gaps = 12/144 (8%) Query: 5 LFSGIWISVVTLISFYML-------FLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS 57 L G+ +++V + H P A+ + + + + I + Sbjct: 20 LILGVVLALVLGGGGFYATWSGLILGASGGHEAEPAHEAPAALPDIAFVPIDPIVIS-LG 78 Query: 58 NGVLQAYFLVKLSFIVNDSQERS--YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 G ++ V + L D + L + A LR Sbjct: 79 RGSDLSHLRFAAQLEVAKANAAEVTMLMPRIVDVINGYLRAVAVSRLEDPTA--LVELRA 136 Query: 116 KIKEDLNSRLGSQFISEVLIDELN 139 ++ + G + ++L+ E Sbjct: 137 QMLRRIQIVTGEGRVRDLLVTEFV 160 >gi|75675316|ref|YP_317737.1| flagellar basal body-associated protein FliL [Nitrobacter winogradskyi Nb-255] gi|74420186|gb|ABA04385.1| Flagellar basal body-associated protein FliL [Nitrobacter winogradskyi Nb-255] Length = 162 Score = 73.2 bits (178), Expect = 2e-11, Method: Composition-based stats. Identities = 24/138 (17%), Positives = 47/138 (34%), Gaps = 8/138 (5%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS-NGVLQ 62 G + +VT S + + E H K + + + + V G Sbjct: 25 IAAIGAALFLVTGGSIWFFMFHHS--VGEQHAEAQPPKPPSFVDVPDMLVNLVGAPGERV 82 Query: 63 AYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 Y +KL V + + ++ TD T + D + G L++++ Sbjct: 83 QYLKLKLVLEVKEEPQVEKIRPALPRVTDLFQTYMRELRPSDLN--GSAGLFRLKEELTR 140 Query: 120 DLNSRLGSQFISEVLIDE 137 +N+ L ++ VL E Sbjct: 141 RVNAVLSPDHVNAVLFKE 158 >gi|110677674|ref|YP_680681.1| flagellar basal body-associated protein FliL [Roseobacter denitrificans OCh 114] gi|109453790|gb|ABG29995.1| flagellar basal body-associated protein FliL [Roseobacter denitrificans OCh 114] Length = 163 Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 18/145 (12%), Positives = 44/145 (30%), Gaps = 13/145 (8%) Query: 5 LFSGIWISVVTLISFYMLFLRSM--------DTMVENHVPPLAIKNTNIIKSELVSIPSV 56 L G ++++ + M +T+ E + + + E ++I Sbjct: 20 LIVGAVLAIIGGGGGFYAASSGMIFATESKKETVEEEKETSNEFSDISFLPLEPMTISMP 79 Query: 57 SNGVLQAYFLVKLSFIVNDSQER--SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 + + + V + D L L + D + + LR Sbjct: 80 RDSA-YKHLRFRGELEVPKEYAEDIKKVTPRIIDVLNGYLRALQVADIEEPAS--LTRLR 136 Query: 115 KKIKEDLNSRLGSQFISEVLIDELN 139 ++ + G ++++LI E Sbjct: 137 SQMLRRIQIVAGPGRVNDLLIMEFV 161 >gi|42524698|ref|NP_970078.1| flagellar protein FliL [Bdellovibrio bacteriovorus HD100] gi|39576908|emb|CAE78137.1| flagellar protein FliL [Bdellovibrio bacteriovorus HD100] Length = 236 Score = 72.8 bits (177), Expect = 2e-11, Method: Composition-based stats. Identities = 25/157 (15%), Positives = 48/157 (30%), Gaps = 21/157 (13%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN---------------II 46 + + + +V +ML+ E + + ++ Sbjct: 82 ILLIALAVVNMLVVAGVGFMLYSNRKKEAAEPKIEQVIKGEAEAQHKEATEEKEVIGKVV 141 Query: 47 KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFV 103 E + +++ + V + V S L+ D + +LS D Sbjct: 142 PLETFIV-NLAGSKGRKVAKVNMELEVTGSHVMEELEKRKAQIRDIIIIILSSKTYEDVS 200 Query: 104 QIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNY 140 +LR +IK+ +NS L IS V E Y Sbjct: 201 SRDGKD--SLRSEIKDTINSFLVQGKISNVFFTEFIY 235 >gi|317051548|ref|YP_004112664.1| flagellar basal body-associated protein FliL [Desulfurispirillum indicum S5] gi|316946632|gb|ADU66108.1| flagellar basal body-associated protein FliL [Desulfurispirillum indicum S5] Length = 170 Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 41/133 (30%), Gaps = 10/133 (7%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELV-----SIPSVSNGVLQAYFLVKL 69 Y L + T + + I ++++ + + Y V + Sbjct: 38 AGAGAYFLLRSPAPAAAPGAEADVPGAPTETTEIGTMYPMDTFIVNLADVLGKRYLRVTI 97 Query: 70 SFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLG 126 +++ + L D + T+LS D + LR +I +N+ L Sbjct: 98 QLEMDNPRLARELDRRSPQLRDAVLTILSSKKYEDISTAQGKL--RLRSEIVSRVNAFLT 155 Query: 127 SQFISEVLIDELN 139 S I V E Sbjct: 156 SGSIRRVYFTEFV 168 >gi|288959251|ref|YP_003449592.1| hypothetical protein AZL_024100 [Azospirillum sp. B510] gi|288911559|dbj|BAI73048.1| hypothetical protein AZL_024100 [Azospirillum sp. B510] Length = 174 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 53/133 (39%), Gaps = 4/133 (3%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKN-TNIIKSELVSIPSVSNGVLQA 63 L + I+++TL ++D M++ + + + + +P + ++ Sbjct: 40 LLIIVVIALLTLAGLAYGGGMALDRMLDQRRIEARMGPKPQLARLPALEVPLDGSRAVEM 99 Query: 64 YFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNS 123 + L+ V + Y +E D L+ +S + + F L+ +IKE +N Sbjct: 100 QVSLVLAPKVEADRILRY-QERIADRLFQTVSQAGAENLTGSGSADF--LKARIKEAVNR 156 Query: 124 RLGSQFISEVLID 136 G+ ++ I+ Sbjct: 157 EAGTGLFRDIYIE 169 >gi|225849154|ref|YP_002729318.1| flagellar basal body-associated protein FliL [Sulfurihydrogenibium azorense Az-Fu1] gi|225644683|gb|ACN99733.1| flagellar basal body-associated protein FliL [Sulfurihydrogenibium azorense Az-Fu1] Length = 169 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 19/129 (14%), Positives = 44/129 (34%), Gaps = 9/129 (6%) Query: 16 LISFYMLFLRSMDTMVENH---VPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFI 72 ++ LF + ++ ++ I ++++ Y V + Sbjct: 39 FAAYKFLFASKNEEKPAEKVTKEVKNVEEHGVELEVGTF-IANLADKDADRYIKVTIVME 97 Query: 73 VNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF 129 V D + + D + TLL D + G + L+++I +N+ L + Sbjct: 98 VQDEKVKEEATKRMPQIKDSINTLLFTKTSEDLKSPE--GIERLKEEIIRRVNAILPTGG 155 Query: 130 ISEVLIDEL 138 + +V E Sbjct: 156 VKDVYFTEF 164 >gi|126730037|ref|ZP_01745849.1| flagellar basal body-associated protein FliL [Sagittula stellata E-37] gi|126709417|gb|EBA08471.1| flagellar basal body-associated protein FliL [Sagittula stellata E-37] Length = 173 Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats. Identities = 20/153 (13%), Positives = 43/153 (28%), Gaps = 22/153 (14%) Query: 6 FSGIWISVVTLISFYMLFLRSM-----------------DTMVENHVPPLAIKNTNIIKS 48 G+ +++ + + + HV A+ + I+ Sbjct: 22 IIGVVLALAGAGGGFFAVQSGLLGGGSDAHAEDAAAGADHAEDQEHVETPALPKVSFIEV 81 Query: 49 ELVSIPSVSNGVLQAYFLVKLSFIVNDSQER--SYLKEIATDYLYTLLSGPPMGDFVQIK 106 V + + G + + S V + + D L + L D Sbjct: 82 PQVMVS-LGPGGHSQHLRFRASLEVPEQYAADVEVILPRVQDVLNSYLRALEARDIEAPG 140 Query: 107 AFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 A LR ++ + G I ++L+ E Sbjct: 141 A--LVRLRGQMLRRVRLVAGEDRIRDLLVLEFV 171 >gi|146278779|ref|YP_001168938.1| flagellar basal body-associated protein FliL [Rhodobacter sphaeroides ATCC 17025] gi|145557020|gb|ABP71633.1| flagellar basal body-associated protein FliL [Rhodobacter sphaeroides ATCC 17025] Length = 161 Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 16/142 (11%), Positives = 42/142 (29%), Gaps = 9/142 (6%) Query: 5 LFSGIWISVVTLISFYMLFLRSM------DTMVENHVPPLAIKNTNIIKSELVSIPSVSN 58 L G +++ + + P+ + + + + + I + Sbjct: 20 LIGGAVLALALGGVGFYATWSGLILSPTGHGGPTVEAGPVPLPDIAFVPVDPIVISLGRD 79 Query: 59 GVLQAY-FLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 L F +L ++ + + L D + L + A LR ++ Sbjct: 80 TTLSHLRFTAQLEVAKANAADVALLMPRIIDVINGYLRAVAVSRLENPGA--LVELRAQM 137 Query: 118 KEDLNSRLGSQFISEVLIDELN 139 + G + ++L+ E Sbjct: 138 LRRIQMVTGEGRVRDLLVTEFV 159 >gi|46201732|ref|ZP_00054471.2| hypothetical protein Magn03009115 [Magnetospirillum magnetotacticum MS-1] Length = 150 Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 11/146 (7%), Positives = 45/146 (30%), Gaps = 9/146 (6%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHV-------PPLAIKNTNIIKSELVSI 53 M+ + + + + + Y + + + P + + L+ + Sbjct: 1 MIFMVVALLMLIGAVIGGLYFWGIDPLAKLGITAPMVSKEPAAPPPPPPPSYVDFGLLIV 60 Query: 54 PSVSNGVLQAYFLVKLSFIVNDSQER--SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFD 111 P + + ++ + + V+ + + + + + + Sbjct: 61 PVIQDREVKKQAEMIVRLEVDPKNKEIVAKNLPRLQNAYLAEMITYLGNTVKEGQPLDIP 120 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDE 137 +R+++ LG ++ +V I+ Sbjct: 121 AIRRRLTISAEKTLGGVYVKDVAIEN 146 >gi|117926843|ref|YP_867460.1| flagellar basal body-associated protein FliL [Magnetococcus sp. MC-1] gi|117610599|gb|ABK46054.1| flagellar basal body-associated protein FliL [Magnetococcus sp. MC-1] Length = 166 Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 17/148 (11%), Positives = 46/148 (31%), Gaps = 16/148 (10%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKN----------TNIIKSELVSIP 54 + + ++ + Y L VE + ++ E + Sbjct: 20 IIIPVVALLIGVGGGYFLGDMLASKSVEEQKQAEPTETKKPEDIRAMVGDVFPLEDFLV- 78 Query: 55 SVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFD 111 +++ G Y + ++ + R + + D + +LL + + + Sbjct: 79 NLNEGRGNRYLKATIELELDTEELRPEVERRQPQIRDVILSLLGSKSAKELMDSEGK--F 136 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDELN 139 LR++I +N+ L + + V Sbjct: 137 RLREEILSRINAVLVNGNVKRVYFTAFV 164 >gi|156975424|ref|YP_001446331.1| flagellar basal body-associated protein FliL [Vibrio harveyi ATCC BAA-1116] gi|156527018|gb|ABU72104.1| hypothetical protein VIBHAR_03155 [Vibrio harveyi ATCC BAA-1116] Length = 166 Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats. Identities = 19/147 (12%), Positives = 40/147 (27%), Gaps = 9/147 (6%) Query: 2 LKFLFSGIWISVVTLI-SFYMLFLRSMDTMVENHVPPLAIKN---TNIIKSELVSIPSVS 57 L + + + ++ + + L A + I +V+ Sbjct: 18 LLIIIIAVVVLLLGGGSAAFFLMGSDEPAQAAQAEQTQAQTAAAPIAYVNIAQPFIFNVT 77 Query: 58 NGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQI-KAFGF-DN 112 +K +V + Q Y + L + + + D Sbjct: 78 GDRRDRLVQIKAQLMVRGSENEQLARYHSPLIESSLLSTFASATVEQLRSPTGRVELRDR 137 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELN 139 IK LN+ +G I +VL + Sbjct: 138 ASDDIKAALNAAVGKPVIEKVLFTDFV 164 >gi|153834120|ref|ZP_01986787.1| flagellar basal body-associated protein FliL [Vibrio harveyi HY01] gi|148869490|gb|EDL68488.1| flagellar basal body-associated protein FliL [Vibrio harveyi HY01] Length = 166 Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 19/147 (12%), Positives = 40/147 (27%), Gaps = 9/147 (6%) Query: 2 LKFLFSGIWISVVTLISF-YMLFLRSMDTMVENHVPPLAIKN---TNIIKSELVSIPSVS 57 L + + + ++ + + L A + I +V+ Sbjct: 18 LLIIIIAVVVLLLGGGAAAFFLMGSDEPAQAAQAEQTQAQTAAAPIAYVNIAQPFIFNVT 77 Query: 58 NGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQI-KAFGF-DN 112 +K +V + Q Y + L + + + D Sbjct: 78 GDRRDRLVQIKAQLMVRGSENEQLARYHSPLIESSLLSTFASATVEQLRSPTGRVELRDR 137 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELN 139 IK LN+ +G I +VL + Sbjct: 138 ASDDIKAALNAAVGKPVIEKVLFTDFV 164 >gi|218463243|ref|ZP_03503334.1| hypothetical protein RetlK5_29134 [Rhizobium etli Kim 5] Length = 76 Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats. Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 2/78 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+K + +GIW+ +TL S Y + ++K E +++P + +G Sbjct: 1 MIKLVLTGIWVCAITLASVYFSVYMATAPAPAATD--TKQSALELVKGETITVPVIGDGA 58 Query: 61 LQAYFLVKLSFIVNDSQE 78 + YFL ++SF++N Sbjct: 59 ITGYFLGRVSFMMNKDML 76 >gi|76810373|ref|YP_331655.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 1710b] gi|161579519|ref|YP_104283.2| flagellar basal body-associated protein FliL [Burkholderia mallei ATCC 23344] gi|161723215|ref|YP_106651.2| flagellar basal body-associated protein FliL [Burkholderia pseudomallei K96243] gi|76579826|gb|ABA49301.1| Flagellar basal body-associated protein FliL [Burkholderia pseudomallei 1710b] Length = 180 Score = 70.9 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 43/145 (29%), Gaps = 10/145 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + FL GI + Y L P + E +++ +S+ + Sbjct: 37 VLFLLIGIVAAAAAAGGTYF-MLSKEGAHSAAPSAPAPLAVPAFFPLEPLTVNLLSDDGI 95 Query: 62 QAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 Q Y V LS + D + + Y + LS ++ L ++K Sbjct: 96 QHYLRVGLSLKLTDPKAQEYLTQHMPELRSRILLALSNKHPEQLATLEGK--HALADELK 153 Query: 119 EDLNSRLGSQ----FISEVLIDELN 139 + + +VL E Sbjct: 154 TLIEQPTQPGNQSARVDDVLFTEFV 178 >gi|30248481|ref|NP_840551.1| flagellar basal body-associated protein FliL [Nitrosomonas europaea ATCC 19718] gi|30138367|emb|CAD84376.1| putative flagellar fliL transmembrane protein [Nitrosomonas europaea ATCC 19718] Length = 162 Score = 70.9 bits (172), Expect = 7e-11, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 48/146 (32%), Gaps = 10/146 (6%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENH-VPPLAIKNTNIIKSELVSIPSVSNG 59 M+ F+ G+ + + + + E K T IK E ++ S+ Sbjct: 16 MILFVLIGVLSVGAGIGGTWYYMKQQQEEGSEVTVEKKKKKKPTTFIKLESFTVNLQSDD 75 Query: 60 VLQAYFLVKLSF---IVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 Y V+LS + + K + + LLS + ++ L + Sbjct: 76 REPHYLQVELSLKVNESDAVKIIEDKKPEVRNQILLLLSSKKPSEINTLEGK--QKLSED 133 Query: 117 IKEDLNSRLG----SQFISEVLIDEL 138 I + + S++ I +VL Sbjct: 134 IIQAVRSKIDSEELEDDILDVLFTSF 159 >gi|42522630|ref|NP_968010.1| flagellar protein FliL [Bdellovibrio bacteriovorus HD100] gi|39575162|emb|CAE79003.1| flagellar protein FliL [Bdellovibrio bacteriovorus HD100] Length = 168 Score = 70.5 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 22/155 (14%), Positives = 47/155 (30%), Gaps = 20/155 (12%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSM------------DTMVENHVPPLAIKNTNIIKS 48 ML + + V YM++ +M D + + + Sbjct: 16 MLFQIIFAVLNLAVMGAGGYMVYASTMGWESPKITEEDVDRELASVSDETDLAPLVY-TM 74 Query: 49 ELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKE----IATDYLYTLLSGPPMGDFVQ 104 + ++ + L ++ ++ A D + LL+ P D Sbjct: 75 DKFTVNLGGEPKRTIRLEINLQ-MLGKEGFEEVMEPENRAKARDRIVRLLNEKPFSDLDS 133 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 I+ F L+ KI ++N L + +V + Sbjct: 134 IQGKLF--LKDKIAGEVNGILRRGVVKDVFFSDFV 166 >gi|323491451|ref|ZP_08096635.1| flagellar basal body-associated protein FliL [Vibrio brasiliensis LMG 20546] gi|323314320|gb|EGA67400.1| flagellar basal body-associated protein FliL [Vibrio brasiliensis LMG 20546] Length = 165 Score = 70.5 bits (171), Expect = 8e-11, Method: Composition-based stats. Identities = 15/133 (11%), Positives = 32/133 (24%), Gaps = 8/133 (6%) Query: 15 TLISFYMLFLRSMDTMVENHVPP---LAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSF 71 + + L E + + +V+ +K+ Sbjct: 31 GGGAAFFLMGSDEGAETEQTAQQQVTTPEDPVAYVNIPQPFLFNVTGDKKDRLVQIKVQL 90 Query: 72 IV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIK-AFGF-DNLRKKIKEDLNSRLG 126 +V + Y + L + + + + IK LN +G Sbjct: 91 MVRGTENENLARYHSPLIESSLLSTFASATVDQLRTANGRVELREKATDDIKASLNRAVG 150 Query: 127 SQFISEVLIDELN 139 I VL + Sbjct: 151 QPVIERVLFTDFV 163 >gi|118588709|ref|ZP_01546117.1| flagellar basal body-associated protein FliL [Stappia aggregata IAM 12614] gi|118438695|gb|EAV45328.1| flagellar basal body-associated protein FliL [Stappia aggregata IAM 12614] Length = 170 Score = 70.5 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 17/145 (11%), Positives = 41/145 (28%), Gaps = 12/145 (8%) Query: 3 KFLF---SGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK---NTNIIKSELVSIPSV 56 K + G+ + + + Y + S + +++ Sbjct: 26 KLILFGGIGLVVLLAAGGAGYYFLMGSSAPAPVPGDAESPQEVQKPVVFYDLPEMTVNLA 85 Query: 57 SNGVLQAYFLVKLSFIVNDSQE---RSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113 + G Y V+++ V + D L D + G L Sbjct: 86 TEGRTT-YLKVRIALEVENRAMIDQIQPYLPRILDAFQIYLRELRPADLE--GSAGLFRL 142 Query: 114 RKKIKEDLNSRLGSQFISEVLIDEL 138 ++++ +N + + VL E+ Sbjct: 143 KEELLRRINLSVYPARVEGVLFKEI 167 >gi|307945663|ref|ZP_07660999.1| flagellar basal body-associated protein FliL [Roseibium sp. TrichSKD4] gi|307771536|gb|EFO30761.1| flagellar basal body-associated protein FliL [Roseibium sp. TrichSKD4] Length = 169 Score = 70.5 bits (171), Expect = 1e-10, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 44/144 (30%), Gaps = 10/144 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAI----KNTNIIKSELVSIPSVS 57 + F G+ + + + Y + P + + +++ + Sbjct: 26 ILFGAIGLVVLLAAGGAAYFFLFMGGEPEAPAGEPGQPVPEVQEPVVFYDLPEMTVNLST 85 Query: 58 NGVLQAYFLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 +G Y V+++ V D + D L D + G L+ Sbjct: 86 DGRTT-YLKVRIALEVKDEETVAQIEPFLPRILDAFQIYLRELRPADLE--GSAGLFRLK 142 Query: 115 KKIKEDLNSRLGSQFISEVLIDEL 138 +++ +N + + VL E+ Sbjct: 143 EELLRRINLSVYPARVDGVLFKEI 166 >gi|67641905|ref|ZP_00440670.1| flagellar protein FliL [Burkholderia mallei GB8 horse 4] gi|121600910|ref|YP_994776.1| flagellar basal body-associated protein FliL [Burkholderia mallei SAVP1] gi|124386222|ref|YP_001027843.1| flagellar basal body-associated protein FliL [Burkholderia mallei NCTC 10229] gi|126450837|ref|YP_001082209.1| flagellar basal body-associated protein FliL [Burkholderia mallei NCTC 10247] gi|126452861|ref|YP_001064313.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 1106a] gi|134281516|ref|ZP_01768224.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 305] gi|167000457|ref|ZP_02266271.1| flagellar protein FliL [Burkholderia mallei PRL-20] gi|167717394|ref|ZP_02400630.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei DM98] gi|167736437|ref|ZP_02409211.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 14] gi|167822053|ref|ZP_02453524.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 9] gi|167843666|ref|ZP_02469174.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei B7210] gi|167892137|ref|ZP_02479539.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 7894] gi|167900649|ref|ZP_02487854.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei NCTC 13177] gi|167908869|ref|ZP_02495960.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 112] gi|167916908|ref|ZP_02503999.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei BCC215] gi|217424017|ref|ZP_03455517.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 576] gi|226193178|ref|ZP_03788788.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei Pakistan 9] gi|237814421|ref|YP_002898872.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei MSHR346] gi|242315063|ref|ZP_04814079.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 1106b] gi|254175292|ref|ZP_04881953.1| flagellar protein FliL [Burkholderia mallei ATCC 10399] gi|254184091|ref|ZP_04890682.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 1655] gi|254186557|ref|ZP_04893074.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei Pasteur 52237] gi|254194704|ref|ZP_04901135.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei S13] gi|254201360|ref|ZP_04907724.1| flagellar protein FliL [Burkholderia mallei FMH] gi|254206702|ref|ZP_04913053.1| flagellar protein FliL [Burkholderia mallei JHU] gi|254259029|ref|ZP_04950083.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 1710a] gi|254298641|ref|ZP_04966092.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 406e] gi|254357365|ref|ZP_04973639.1| flagellar protein FliL [Burkholderia mallei 2002721280] gi|52208079|emb|CAH34009.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei K96243] gi|52427326|gb|AAU47919.1| flagellar protein FliL [Burkholderia mallei ATCC 23344] gi|121229720|gb|ABM52238.1| flagellar protein FliL [Burkholderia mallei SAVP1] gi|124294242|gb|ABN03511.1| flagellar protein FliL [Burkholderia mallei NCTC 10229] gi|126226503|gb|ABN90043.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 1106a] gi|126243707|gb|ABO06800.1| flagellar protein FliL [Burkholderia mallei NCTC 10247] gi|134247183|gb|EBA47269.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 305] gi|147747254|gb|EDK54330.1| flagellar protein FliL [Burkholderia mallei FMH] gi|147752244|gb|EDK59310.1| flagellar protein FliL [Burkholderia mallei JHU] gi|148026429|gb|EDK84514.1| flagellar protein FliL [Burkholderia mallei 2002721280] gi|157808617|gb|EDO85787.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 406e] gi|157934242|gb|EDO89912.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei Pasteur 52237] gi|160696337|gb|EDP86307.1| flagellar protein FliL [Burkholderia mallei ATCC 10399] gi|169651454|gb|EDS84147.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei S13] gi|184214623|gb|EDU11666.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 1655] gi|217393080|gb|EEC33102.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 576] gi|225934778|gb|EEH30755.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei Pakistan 9] gi|237505454|gb|ACQ97772.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei MSHR346] gi|238522918|gb|EEP86360.1| flagellar protein FliL [Burkholderia mallei GB8 horse 4] gi|242138302|gb|EES24704.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 1106b] gi|243063645|gb|EES45831.1| flagellar protein FliL [Burkholderia mallei PRL-20] gi|254217718|gb|EET07102.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 1710a] Length = 165 Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 43/145 (29%), Gaps = 10/145 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + FL GI + Y L P + E +++ +S+ + Sbjct: 22 VLFLLIGIVAAAAAAGGTYF-MLSKEGAHSAAPSAPAPLAVPAFFPLEPLTVNLLSDDGI 80 Query: 62 QAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 Q Y V LS + D + + Y + LS ++ L ++K Sbjct: 81 QHYLRVGLSLKLTDPKAQEYLTQHMPELRSRILLALSNKHPEQLATLEGK--HALADELK 138 Query: 119 EDLNSRLGSQ----FISEVLIDELN 139 + + +VL E Sbjct: 139 TLIEQPTQPGNQSARVDDVLFTEFV 163 >gi|307264878|ref|ZP_07546440.1| flagellar basal body-associated protein FliL [Thermoanaerobacter wiegelii Rt8.B1] gi|326389472|ref|ZP_08211039.1| flagellar basal body-associated protein FliL [Thermoanaerobacter ethanolicus JW 200] gi|306920136|gb|EFN50348.1| flagellar basal body-associated protein FliL [Thermoanaerobacter wiegelii Rt8.B1] gi|325994477|gb|EGD52902.1| flagellar basal body-associated protein FliL [Thermoanaerobacter ethanolicus JW 200] Length = 135 Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 22/139 (15%), Positives = 41/139 (29%), Gaps = 13/139 (9%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K + + +V++ ++ F P I N +G Sbjct: 4 KTILIAVVAAVLSFGIAFVYFNNF-----AFTNKPKEITYYNYSPGGEFITNLKGDG--- 55 Query: 63 AYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 + + V D + D + +L G D + + L+ IK Sbjct: 56 KFVKATIELQVADKNILKTLEERNPQIRDLIIQILRGKTEQDVEGPEGQ--EKLKNDIKN 113 Query: 120 DLNSRLGSQFISEVLIDEL 138 ++N +G I V DE Sbjct: 114 EINKIIGEGKIVNVYFDEF 132 >gi|54307283|ref|YP_128303.1| hypothetical protein PBPRA0046 [Photobacterium profundum SS9] gi|46911703|emb|CAG18501.1| Hypothetical protein PBPRA0046 [Photobacterium profundum SS9] Length = 164 Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 24/147 (16%), Positives = 53/147 (36%), Gaps = 13/147 (8%) Query: 2 LKFLFSGIWISVVTLISF---YMLFLRSMDTMVENHVPPLAIKN----TNIIKSELVSIP 54 + + + + + + + Y M + P + + ++ + + Sbjct: 14 IPLIIAAVVLVIALAGAGGWWYFQQQAKSMVMAVDVEPQVPVAARVKKPVFLELKKFVVS 73 Query: 55 SVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGF- 110 + L Y ++++S + + E L+ + + + TLLS DF Q Sbjct: 74 VPGDDRLH-YLMMEMSVMSYNQDELDKLQDFLPVIRNAVVTLLSEQHYNDFAQPGVMKPL 132 Query: 111 -DNLRKKIKEDLNSRLGSQFISEVLID 136 LR K++ +N S I +VLI Sbjct: 133 QIALRDKLRRVMNDMASSNGIDQVLIT 159 >gi|323705436|ref|ZP_08117011.1| flagellar basal body-associated protein FliL [Thermoanaerobacterium xylanolyticum LX-11] gi|323535338|gb|EGB25114.1| flagellar basal body-associated protein FliL [Thermoanaerobacterium xylanolyticum LX-11] Length = 132 Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 35/127 (27%), Gaps = 16/127 (12%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN 74 S + F + P I N + + + V Sbjct: 16 AFGSAFFFFNY--------NSKPAKIVYYNYSPGSEFITNLKGDD---KFIKAGIELEVT 64 Query: 75 DSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFIS 131 D L D + +L D + G L+ +IK +N LG+ I+ Sbjct: 65 DKNVLKELSDQNPKIRDAIIQILRNETAQDLE--GSEGQAKLQNQIKSQINKILGADKIT 122 Query: 132 EVLIDEL 138 V D+ Sbjct: 123 NVYFDDF 129 >gi|254486346|ref|ZP_05099551.1| conserved hypothetical protein [Roseobacter sp. GAI101] gi|214043215|gb|EEB83853.1| conserved hypothetical protein [Roseobacter sp. GAI101] Length = 168 Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 25/163 (15%), Positives = 48/163 (29%), Gaps = 25/163 (15%) Query: 1 MLKFL-FSGIWISVV-TLISFYMLFLRSMDTMVE-----------------NHVPPLAIK 41 M K + + I L + L + P Sbjct: 1 MAKLIPILVLVICAALGLTAGKFLRPPPAEPAESVSEEIDGEKPAEEAETSEQEPEGTSP 60 Query: 42 NTNIIKSE-LVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK--EIATDYLYTLLSGPP 98 + + +K +P V++ + A ++ LS +E L+ D +L Sbjct: 61 DRDYVKMNNQFVVPIVTDNRVSAMVVLSLSIEAPLGKEDDVLRREPKLRDSFLRVLFTHA 120 Query: 99 MG---DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 D L++ +KE G+ + +VLI E+ Sbjct: 121 NIGGFDGEFTSIEKLGGLKRALKEVGQRDAGADLVKDVLIVEI 163 >gi|59712453|ref|YP_205229.1| flagellar basal body-associated protein FliL [Vibrio fischeri ES114] gi|197334475|ref|YP_002156672.1| flagellar basal body-associated protein FliL [Vibrio fischeri MJ11] gi|59480554|gb|AAW86341.1| flagellar basal body-associated protein FliL1 [Vibrio fischeri ES114] gi|197315965|gb|ACH65412.1| flagellar basal body-associated protein FliL [Vibrio fischeri MJ11] Length = 161 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 11/145 (7%), Positives = 38/145 (26%), Gaps = 9/145 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAI----KNTNIIKSELVSIPSVSNG 59 + + ++ F S + E +A + I +V+ Sbjct: 15 MIIIALVALLLIGGGVAAWFFMSSEPAPEPTEQDIAALEANMPALYLNLPQPFIFNVTGD 74 Query: 60 VLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQI-KAFGF-DNLR 114 +K+ ++ ++ + L + + + + + Sbjct: 75 KRDRLVQLKVQVMMRGTDNEAVAKQHTPLIESALLSTFAAATVEQLREPRGRIELREQAT 134 Query: 115 KKIKEDLNSRLGSQFISEVLIDELN 139 + I++ + +VL + Sbjct: 135 RDIQDAFTKITAKPVVEKVLFTDFV 159 >gi|218778864|ref|YP_002430182.1| flagellar basal body-associated protein FliL [Desulfatibacillum alkenivorans AK-01] gi|218760248|gb|ACL02714.1| Flagellar basal body-associated protein FliL [Desulfatibacillum alkenivorans AK-01] Length = 166 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 22/153 (14%), Positives = 52/153 (33%), Gaps = 18/153 (11%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN------------IIKSE 49 LK++ + + V+ F L S + A +++ + Sbjct: 15 LKWILIALIVVVLGAGGFIGFLLMSGGGDAQPAANVPAAPAPAPAGNPNAGAPGIMVEMD 74 Query: 50 LVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIK 106 + ++ + + Y K++F V ++ D + LLS + +++ Sbjct: 75 SFIV-NLRDREGKRYLKAKINFEVPTEAVKAEFTTRKAQIRDVILILLSAKSFAEISRLE 133 Query: 107 AFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 L++++ +N L S +S V E Sbjct: 134 GKL--QLKEELMARVNQVLSSGRVSNVFFTEFV 164 >gi|300311369|ref|YP_003775461.1| flagellar transmembrane protein FliL [Herbaspirillum seropedicae SmR1] gi|300074154|gb|ADJ63553.1| flagellar FliL transmembrane protein [Herbaspirillum seropedicae SmR1] Length = 171 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 18/146 (12%), Positives = 41/146 (28%), Gaps = 10/146 (6%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 ML + + + V+ + + + ++ K + E + ++ Sbjct: 25 MLFIIVGAVLVLVIGGAAAFFMMGGKGKKGEDHAEEKAEAKAPTFVVIEPFVV-NLQQES 83 Query: 61 LQAYFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 Y V ++ V D Q L +LS + + + L +I Sbjct: 84 GDQYLQVAMTLQVPDGQTAEALKLYMPQVRSRLLMVLSSKKASELLTSEGK--RRLTDEI 141 Query: 118 KEDLNSRLG----SQFISEVLIDELN 139 + L I++V Sbjct: 142 IDQLGEPFSGKGKGPQITDVFYTSFV 167 >gi|255261645|ref|ZP_05340987.1| flagellar basal body-associated protein FliL [Thalassiobium sp. R2A62] gi|255103980|gb|EET46654.1| flagellar basal body-associated protein FliL [Thalassiobium sp. R2A62] Length = 168 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 45/143 (31%), Gaps = 12/143 (8%) Query: 6 FSGIWISVVTLISFYMLF---------LRSMDTMVENHVPPLAIKNTNIIKSELVSIPSV 56 G+ +++ + ++ + + + + + E + I Sbjct: 25 IIGLVLAIAGGVGGFLAVDNGFILNSEQQVVADGYSSDQARTVLPEVAFVVLEPLVISLP 84 Query: 57 SNGVLQAY-FLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 Q F +L + + + +K D L L + D + A LR Sbjct: 85 HPTRRQHLRFSAQLEVVPDYQAQVEAIKPRIVDVLNGYLRAVDVADLEDLSA--LTRLRA 142 Query: 116 KIKEDLNSRLGSQFISEVLIDEL 138 ++ + G + + ++LI E Sbjct: 143 QMLRRIQVVTGPEQVRDLLIMEF 165 >gi|124516302|gb|EAY57810.1| putative flagellar basal body-associated protein FliL [Leptospirillum rubarum] gi|206603145|gb|EDZ39625.1| Putative flagellar basal body-associated protein FliL [Leptospirillum sp. Group II '5-way CG'] Length = 168 Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 10/145 (6%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNT----NIIKSELVSIPSVSN 58 K + +G+ + + + + + P ++ II + + + Sbjct: 24 KLVLAGVAVLALLGGGAFFFLKHGHKNDSQVAMTPKEMEKMIKAHPIIDLKPFVVNLNTA 83 Query: 59 GVLQ-AYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 Y V+++F +++ Q + + + LL D LR Sbjct: 84 SAENSRYLKVRIAFKLDNPQVAKEVDYRMPEIQNIILILLGSETADDLGTTGGKL--ALR 141 Query: 115 KKIKEDLNSRLGSQFISEVLIDELN 139 +I+ +NS L +S V E Sbjct: 142 NQIRHRVNSILTLGRVSSVYFTEFV 166 >gi|46578464|ref|YP_009272.1| flagellar protein FliL [Desulfovibrio vulgaris str. Hildenborough] gi|46447875|gb|AAS94531.1| flagellar protein FliL [Desulfovibrio vulgaris str. Hildenborough] Length = 171 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 37/106 (34%), Gaps = 6/106 (5%) Query: 37 PLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTL 93 A + + ++++ + Y + + VN ++ D + L Sbjct: 67 DTAKSEGRLTTLPPFLV-NLADPAGRRYLKLSMDVEVNAPAAVKEIEGQTAKVRDAIILL 125 Query: 94 LSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 LSG + + L+ ++ + LN LG+ ++ V E Sbjct: 126 LSGKSYTELAAPEGKLL--LKNEVADRLNQILGAPRVTRVYFTEFV 169 >gi|260574398|ref|ZP_05842402.1| flagellar basal body-associated protein FliL [Rhodobacter sp. SW2] gi|259023294|gb|EEW26586.1| flagellar basal body-associated protein FliL [Rhodobacter sp. SW2] Length = 161 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 24/154 (15%), Positives = 44/154 (28%), Gaps = 21/154 (13%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPP-----------LAIKNTNIIKS-E 49 + G+ V + L E P +K Sbjct: 7 ILLAVIGL---AVGGGAGIFLRPAPEAPSPEAAADPHAVATPSGEEVPPEAQPEYVKLSN 63 Query: 50 LVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL--KEIATDYLYTLLSGPPMG---DFVQ 104 +P V++G + A ++ LS V + + D +L Sbjct: 64 QFIVPIVADGRVNAMVIMALSVEVTPGSTEAVYAKEPKLRDAFLQVLFDHANAGGFRGSF 123 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 LRK + E S +G +++VLI ++ Sbjct: 124 TDGANLTLLRKALLEVAQSTMG-DMVTDVLIADI 156 >gi|254500959|ref|ZP_05113110.1| flagellar basal body-associated protein FliL [Labrenzia alexandrii DFL-11] gi|222437030|gb|EEE43709.1| flagellar basal body-associated protein FliL [Labrenzia alexandrii DFL-11] Length = 169 Score = 68.9 bits (167), Expect = 2e-10, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 43/146 (29%), Gaps = 13/146 (8%) Query: 3 KFLFSG----IWISVVTLISFYMLFLRSMDTMVENHVPPLAIK---NTNIIKSELVSIPS 55 K + G + + V ++Y LF+ + +++ Sbjct: 24 KLILFGAIGLVVLLAVGGGAYYFLFMGDSMPAPAPGEDAPPQEAQRPVVFYDLPEMTVNL 83 Query: 56 VSNGVLQAYFLVKLSFIVNDSQE---RSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDN 112 + G Y V+++ V + D L D + G Sbjct: 84 ATEGRTT-YLKVRIALEVENRAMIDQIQPYLPRILDAFQIYLRELRPADLE--GSAGLFR 140 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDEL 138 L++++ +N + + VL E+ Sbjct: 141 LKEELLRRINLSVYPAKVEGVLFKEI 166 >gi|304321128|ref|YP_003854771.1| flagellar motor protein [Parvularcula bermudensis HTCC2503] gi|303300030|gb|ADM09629.1| flagellar motor protein [Parvularcula bermudensis HTCC2503] Length = 165 Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 46/151 (30%), Gaps = 19/151 (12%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVEN--------HVPPLAIKNTN-----IIKSEL 50 FLF+G+ +SVV S + + + PL + + E Sbjct: 17 FLFTGV-LSVVAAASTFGMVWFAAAPPPPVDAAACAGFTAEPLTPEEIEARTAKYVALEP 75 Query: 51 VSIPSVSNGVLQAYFLVKLSF--IVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAF 108 ++ + + + ++ + + D L L + Sbjct: 76 FTVS-LGPDAGAKHLRMSVALGRPADAVELSESEHLRLRDKLLERLRKVELTTITDPD-- 132 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 G L++ + + + LG + VL+ E Sbjct: 133 GMPALKESLLDQAQATLGPDTVYNVLVTEFV 163 >gi|120603952|ref|YP_968352.1| flagellar basal body-associated protein FliL [Desulfovibrio vulgaris DP4] gi|120564181|gb|ABM29925.1| flagellar basal body-associated protein FliL [Desulfovibrio vulgaris DP4] gi|311232392|gb|ADP85246.1| flagellar basal body-associated protein FliL [Desulfovibrio vulgaris RCH1] Length = 169 Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 37/106 (34%), Gaps = 6/106 (5%) Query: 37 PLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTL 93 A + + ++++ + Y + + VN ++ D + L Sbjct: 65 DTAKSEGRLTTLPPFLV-NLADPAGRRYLKLSMDVEVNAPAAVKEIEGQTAKVRDAIILL 123 Query: 94 LSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 LSG + + L+ ++ + LN LG+ ++ V E Sbjct: 124 LSGKSYTELAAPEGKLL--LKNEVADRLNQILGAPRVTRVYFTEFV 167 >gi|118474507|ref|YP_892093.1| flagellar basal body-associated protein FliL [Campylobacter fetus subsp. fetus 82-40] gi|118413733|gb|ABK82153.1| flagellar basal body-associated protein FliL [Campylobacter fetus subsp. fetus 82-40] Length = 175 Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 18/158 (11%), Positives = 50/158 (31%), Gaps = 24/158 (15%) Query: 2 LKFLFSGIWISVVTLIS--FYMLFLRSMDTMVENHVPPLAIKN----------------T 43 + G+ + ++ + + +ML S + +E + P + + Sbjct: 18 VLIAIVGVLVFLLIIGALVAFMLVGSSSEQKMEANQAPNSTQQQAAPSPKQRSNDFFNVG 77 Query: 44 NIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMG 100 + + + +S + L+ +++ + + D + LS Sbjct: 78 PMYPMDQFLVNLLSE-SGSRFLKTTLNLELSEQTLSPEIDKKKPLIRDIIIRTLSSKTYE 136 Query: 101 DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 D K + L+ ++ +N L +I V + Sbjct: 137 DVSTSKGK--ERLKDELVTKINEILRDGYIKNVYFTDF 172 >gi|148976419|ref|ZP_01813125.1| flagellar basal body-associated protein FliL [Vibrionales bacterium SWAT-3] gi|145964242|gb|EDK29498.1| flagellar basal body-associated protein FliL [Vibrionales bacterium SWAT-3] Length = 162 Score = 68.9 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 17/147 (11%), Positives = 43/147 (29%), Gaps = 9/147 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFL----RSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS 57 L + + + ++ + FL + ++ + +A + + + +V+ Sbjct: 14 LLIIIIAVVVLLLGIGGALFFFLGSDDSASESESQPATAVVAAEPVMYVNIPQPFLFNVT 73 Query: 58 NGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQI-KAFGF-DN 112 +K +V + Y + L + + D Sbjct: 74 GDKKDRLVQIKAQLMVRGSKNEDLARYHSPLVESTLLATFASATVDQLRSPTGRVELRDK 133 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELN 139 + IK L +G I +VL + Sbjct: 134 ATEDIKASLAQAVGQPVIEKVLFTDFV 160 >gi|20807878|ref|NP_623049.1| flagellar basal body-associated protein [Thermoanaerobacter tengcongensis MB4] gi|20516442|gb|AAM24653.1| Flagellar basal body-associated protein [Thermoanaerobacter tengcongensis MB4] Length = 135 Score = 68.5 bits (166), Expect = 4e-10, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 41/139 (29%), Gaps = 13/139 (9%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K + + V++ + ++ F + N +G Sbjct: 4 KTILIVVIAMVLSFGAAFVYFNNFAHPNKTPE-----VTYYNYSPGGEFITNLKGDG--- 55 Query: 63 AYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 + V + V D + L+ D + +L + + L+ IK Sbjct: 56 KFIKVVVELQVTDPKVLKKLEENTPQIRDAIIQILRSKTAQEVEGPQGQEM--LKNDIKN 113 Query: 120 DLNSRLGSQFISEVLIDEL 138 ++N +G + V ++ Sbjct: 114 EINKIIGEGKVVNVYFNDF 132 >gi|157165347|ref|YP_001466934.1| flagellar basal body-associated protein FliL [Campylobacter concisus 13826] gi|112799969|gb|EAT97313.1| flagellar basal body-associated protein FliL [Campylobacter concisus 13826] Length = 178 Score = 68.2 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 18/161 (11%), Positives = 42/161 (26%), Gaps = 25/161 (15%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDT--------------MVENHVPPLAIKNTNII 46 M+ + + + +V L L S + + Sbjct: 19 MI-IIIAIFVLLLVIGGLVAFLMLSSDEPKEANMAQTPAQTQTQPAPAQNKAKRGGNDYS 77 Query: 47 KSELV-----SIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPP 98 + + ++ + + K+ +D + L + D + LS Sbjct: 78 NMGPIYPLDQFVVNLLSENGSRFLKTKIDLEQSDELLTAELDKKKALLRDIIIRTLSSKT 137 Query: 99 MGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + K L+ +I LN L +I + + Sbjct: 138 YEEVSTAKGKD--RLKDEIVGKLNEVLNDGYIKNIFFTDFV 176 >gi|220903652|ref|YP_002478964.1| flagellar basal body-associated protein FliL [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867951|gb|ACL48286.1| flagellar basal body-associated protein FliL [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 212 Score = 68.2 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 36/109 (33%), Gaps = 5/109 (4%) Query: 33 NHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDS--QERSYLKEIATDYL 90 L ++ V++ ++++ + Y + + VN D + Sbjct: 105 ERQSDLPRSGGMVLPLPPVTV-NLADPSGRRYLKMGMEVEVNADVSAALQANNARIRDAI 163 Query: 91 YTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 LL+G D L+ ++ LN LG+Q + V + Sbjct: 164 IMLLAGKSYADIASPDGKVL--LKAEVAARLNQILGAQRVVRVFFTDFV 210 >gi|237755391|ref|ZP_04584018.1| flagellar basal body-associated protein FliL [Sulfurihydrogenibium yellowstonense SS-5] gi|237692432|gb|EEP61413.1| flagellar basal body-associated protein FliL [Sulfurihydrogenibium yellowstonense SS-5] Length = 169 Score = 67.8 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 16/109 (14%), Positives = 38/109 (34%), Gaps = 6/109 (5%) Query: 33 NHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDY 89 + A + ++ + ++++ Y V + V D + + D Sbjct: 59 ANEIKKAEEQGVELEVGTF-VANLADKDADRYIKVTIVMEVQDEKVKEEATKRMPQIKDA 117 Query: 90 LYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + TLL + + G + L+++I N+ L + +V E Sbjct: 118 INTLLFTKTSEELKSPE--GIEKLKEEIIRRTNAILPLGGVKDVYFTEF 164 >gi|159045795|ref|YP_001534589.1| flagellar basal body-associated protein FliL [Dinoroseobacter shibae DFL 12] gi|157913555|gb|ABV94988.1| flagellar basal body-associated protein FliL [Dinoroseobacter shibae DFL 12] Length = 163 Score = 67.8 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 41/114 (35%), Gaps = 7/114 (6%) Query: 32 ENHVPPLAIKNTNIIKSE-LVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL--KEIATD 88 N +K +P V +G + + ++ ++ V + + D Sbjct: 46 STEESFDPSGNFEYVKLNNQFVVPVVRDGRVASLVVLSITLEVTNGLREEVYAKEPRIRD 105 Query: 89 YLYTLLSGPPMG---DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 L +L D V ++F LR ++E S +G I +VL+ ++ Sbjct: 106 TLLAVLFDHSNSGGFDGVFTESFTLKTLRLAMREATRSLMGDD-IKDVLVMDIV 158 >gi|332702325|ref|ZP_08422413.1| flagellar basal body-associated protein FliL [Desulfovibrio africanus str. Walvis Bay] gi|332552474|gb|EGJ49518.1| flagellar basal body-associated protein FliL [Desulfovibrio africanus str. Walvis Bay] Length = 173 Score = 67.8 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 45/114 (39%), Gaps = 6/114 (5%) Query: 27 MDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---K 83 + P+A N ++ + ++++ + + Y + L V + + L + Sbjct: 59 APPEGQPIGTPIATGNEQLVSLPTFIV-NLADPLGRRYLKITLDVEVINDKAARDLTAKE 117 Query: 84 EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 D + LLS D +++ L+K++ E LN LG + V I E Sbjct: 118 ARIRDAVILLLSSKSYQDLSTMESKIL--LKKEVAERLNQALGGPQVLRVYITE 169 >gi|77918774|ref|YP_356589.1| flagellar basal body-associated protein [Pelobacter carbinolicus DSM 2380] gi|77544857|gb|ABA88419.1| flagellar basal body-associated protein [Pelobacter carbinolicus DSM 2380] Length = 167 Score = 67.8 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 15/145 (10%), Positives = 42/145 (28%), Gaps = 14/145 (9%) Query: 6 FSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN--------IIKSELVSIPSVS 57 G+ + ++ YM+ + + N +++ E + + Sbjct: 24 ILGVLLLGAIGVAAYMMGKANAPAAEQEEQTAGDTAPANGTKVLSGLMVEVEPFIVNIL- 82 Query: 58 NGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 + Y ++ V+ D + L+S + ++ LR Sbjct: 83 DVQGTRYLKASITLEVDSELAIQEATERMPQIRDAVLLLISNKTFSEMSDLQGKL--QLR 140 Query: 115 KKIKEDLNSRLGSQFISEVLIDELN 139 ++ +NS + ++ E Sbjct: 141 AELMAKINSFFRRGKVQKIYFTEFV 165 >gi|283853448|ref|ZP_06370692.1| flagellar basal body-associated protein FliL [Desulfovibrio sp. FW1012B] gi|283571168|gb|EFC19184.1| flagellar basal body-associated protein FliL [Desulfovibrio sp. FW1012B] Length = 198 Score = 67.8 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 18/102 (17%), Positives = 38/102 (37%), Gaps = 4/102 (3%) Query: 39 AIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN-DSQERSYLKEIATDYLYTLLSGP 97 +N + + ++++ + Y + L + + + + D L LLS Sbjct: 98 DKAPSNNVALPPFVV-NLADPNARRYLKIVLDVEMTGNPELLEANQAKIRDSLLMLLSSK 156 Query: 98 PMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 D ++ LRK+I + LN LG ++ V + Sbjct: 157 TSQDLATLEGKIL--LRKEIVDRLNQALGQAKVARVYFTDFV 196 >gi|239909252|ref|YP_002955994.1| flagellar FliL protein [Desulfovibrio magneticus RS-1] gi|239799119|dbj|BAH78108.1| flagellar FliL protein [Desulfovibrio magneticus RS-1] Length = 199 Score = 67.4 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 20/91 (21%), Positives = 36/91 (39%), Gaps = 3/91 (3%) Query: 50 LVSIPSVSNGVLQAYFLVKLSFIV-NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAF 108 + ++++ + Y V L V ++ + K D L LLS D ++ Sbjct: 109 PPFVVNLADPNARRYLKVVLEVEVTSNPELLEDNKAKIRDALLMLLSSKTSQDLSTLEGK 168 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 LRK+I + LN +G +S V + Sbjct: 169 IL--LRKEIVDRLNQAIGQPKVSRVYFTDFV 197 >gi|110677666|ref|YP_680673.1| hypothetical protein RD1_0261 [Roseobacter denitrificans OCh 114] gi|109453782|gb|ABG29987.1| hypothetical protein RD1_0261 [Roseobacter denitrificans OCh 114] Length = 166 Score = 67.4 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 24/119 (20%), Positives = 39/119 (32%), Gaps = 6/119 (5%) Query: 26 SMDTMVENHVPPLAIKNTNIIKS-ELVSIPSVSNGVLQAYFLVKLSFIVNDSQERS--YL 82 S T E L I +K +P V + + ++ LS Q L Sbjct: 43 SAATEKEEAQDDLPIAGKEYVKLSNQFVVPIVEKDRVSSMIVMTLSVEAPQGQGEVIYDL 102 Query: 83 KEIATDYLYTLLSGPPMG---DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + D +L I D +R+ +++ G IS+VLI E+ Sbjct: 103 EPKIRDVFLRILFDHAAIGGFRGAFINNENLDVVRRNLRDGAIKTFGEDLISDVLIFEI 161 >gi|259417047|ref|ZP_05740966.1| flagellar basal body-associated protein FliL [Silicibacter sp. TrichCH4B] gi|259345953|gb|EEW57767.1| flagellar basal body-associated protein FliL [Silicibacter sp. TrichCH4B] Length = 185 Score = 67.4 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 20/114 (17%), Positives = 36/114 (31%), Gaps = 3/114 (2%) Query: 27 MDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAY-FLVKLSFIVNDSQERSYLKEI 85 V+ I N I+ E + + +Q F +L D E + Sbjct: 72 APEGVDKGESAEEIANLAFIEMEPIVVTLNRASGVQQLRFRAQLEVNQADQAEVETVLPR 131 Query: 86 ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 D L + L + D LR ++ +N G + ++LI + Sbjct: 132 VVDVLNSYLRALELEDLTDP--MALPKLRAQMLRRINIVTGQGRVRDLLIMDFV 183 >gi|220934500|ref|YP_002513399.1| flagellar basal body-associated protein FliL [Thioalkalivibrio sp. HL-EbGR7] gi|219995810|gb|ACL72412.1| flagellar basal body-associated protein FliL [Thioalkalivibrio sp. HL-EbGR7] Length = 167 Score = 67.4 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 19/145 (13%), Positives = 38/145 (26%), Gaps = 7/145 (4%) Query: 2 LKFLFSGIWISVVTLI--SFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59 +K + + ++ + FL + P + E + + Sbjct: 21 MKLILIVVLAVLLGGGIAGGVLFFLMGGEPREVVEAGPAVLPPPIYKSLEPALVVNFQGP 80 Query: 60 VLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGF--DNLR 114 Y V + D + + + L LLSG + + + + Sbjct: 81 GRIRYVQVGVVMSARDPKVMDAVDAHMPVIRNNLIMLLSGKTYEELNTREGKEQAREEVL 140 Query: 115 KKIKEDLNSRLGSQFISEVLIDELN 139 I+ L R G I V Sbjct: 141 DTIRRVLEERTGEAGIEAVYFTSFV 165 >gi|289666106|ref|ZP_06487687.1| flagellar basal body-associated protein FliL [Xanthomonas campestris pv. vasculorum NCPPB702] Length = 209 Score = 67.4 bits (163), Expect = 8e-10, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 46/147 (31%), Gaps = 9/147 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK---NTNIIKSELVSIPSVSN 58 + + G+ + + F D H P + + + ++++ Sbjct: 61 ILLVAIGVVVLAAAGGGAWFFFGHKDDEKDGKHAAPKVAEVPKPAQYFPMDPAIVVNLAD 120 Query: 59 -GVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQI--KAFGFDN 112 G Y V++ + D +E + +L LLS D + K Sbjct: 121 PGDGPQYLQVEVQLVTRDPEELKLITENAPAIRAHLLMLLSQTKATDVADLAGKQKLQKA 180 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELN 139 + ++ + S G + + E+L Sbjct: 181 ALAEAQKVMTSETGKKCVEELLFTSFV 207 >gi|188997538|ref|YP_001931789.1| flagellar basal body-associated protein FliL [Sulfurihydrogenibium sp. YO3AOP1] gi|188932605|gb|ACD67235.1| flagellar basal body-associated protein FliL [Sulfurihydrogenibium sp. YO3AOP1] Length = 169 Score = 67.0 bits (162), Expect = 9e-10, Method: Composition-based stats. Identities = 17/109 (15%), Positives = 39/109 (35%), Gaps = 6/109 (5%) Query: 33 NHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDY 89 + A + ++ + ++++ Y V + V D + + D Sbjct: 59 ANEIKKAEEQGVELEVGTF-VANLADKDADRYIKVTIIMEVQDEKVKEEATKRMPQIKDA 117 Query: 90 LYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + TLL G+ + G + L+++I N+ L + +V E Sbjct: 118 INTLLFTKTSGELKSPE--GIEKLKEEIIRRTNAILPLGGVKDVYFTEF 164 >gi|163733146|ref|ZP_02140590.1| hypothetical protein RLO149_10810 [Roseobacter litoralis Och 149] gi|161393681|gb|EDQ18006.1| hypothetical protein RLO149_10810 [Roseobacter litoralis Och 149] Length = 166 Score = 67.0 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 23/120 (19%), Positives = 42/120 (35%), Gaps = 6/120 (5%) Query: 25 RSMDTMVENHVPPLAIKNTNIIKS-ELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY-- 81 S T E L I +K +P V + + ++ LS + Q ++ Sbjct: 42 SSETTAKEEAKDELPIAGKEYVKLSNQFVVPIVEKDRVSSMIVMTLSVEAPEGQGQAVYD 101 Query: 82 LKEIATDYLYTLLSGPPMG---DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 L+ D +L + D +R+ +++ G IS+VLI E+ Sbjct: 102 LEPKIRDVFLRILFDHAAIGGFRGAFLNNENLDIVRRNLRDGAIKTFGKDLISDVLIFEI 161 >gi|304438435|ref|ZP_07398375.1| flagellar basal body-associated protein FliL [Selenomonas sp. oral taxon 149 str. 67H29BP] gi|304368518|gb|EFM22203.1| flagellar basal body-associated protein FliL [Selenomonas sp. oral taxon 149 str. 67H29BP] Length = 173 Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 42/136 (30%), Gaps = 16/136 (11%) Query: 16 LISFYMLFLRSMDTMVENH--VPPLAIKNTNIIKSELV---SIPSVSNGVLQAYFLVKLS 70 Y +F ++ + K + +V G Y + Sbjct: 38 GGISYYIFSQAESPSHAEDGGSSKASHDPGVFYKLGDPKEGILVNVGGGRAGKYLKAGIV 97 Query: 71 FIVN--------DSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN 122 +N D + + D L P+ +F K D L+K++K+ LN Sbjct: 98 MELNPGKSDVVKDGKVNPVAETKILDTTMQFLRAAPLEEFDATKQ---DALKKQLKDALN 154 Query: 123 SRLGSQFISEVLIDEL 138 RLG + +V I Sbjct: 155 DRLGQGSVYDVYITSF 170 >gi|303246795|ref|ZP_07333072.1| flagellar basal body-associated protein FliL [Desulfovibrio fructosovorans JJ] gi|302491812|gb|EFL51692.1| flagellar basal body-associated protein FliL [Desulfovibrio fructosovorans JJ] Length = 190 Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 40/103 (38%), Gaps = 4/103 (3%) Query: 38 LAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN-DSQERSYLKEIATDYLYTLLSG 96 +N++ + ++++ + Y + LS + + + + D L LLS Sbjct: 89 GKEAPSNLVALPAFVV-NLADPNARRYLKIVLSVEMTGNPELLEANQAKIRDALLMLLST 147 Query: 97 PPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 D ++ LRK+I + LN +G ++ V + Sbjct: 148 KTSQDLSTLEGKIL--LRKEIVDRLNQAIGQAKVARVYFTDFV 188 >gi|92116938|ref|YP_576667.1| flagellar basal body-associated protein FliL [Nitrobacter hamburgensis X14] gi|91799832|gb|ABE62207.1| flagellar basal body-associated protein FliL [Nitrobacter hamburgensis X14] Length = 190 Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 25/141 (17%), Positives = 49/141 (34%), Gaps = 9/141 (6%) Query: 2 LKFLFSGI-WISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS-NG 59 LK + + + + +V + F R E+H K + + + V G Sbjct: 50 LKLIVAAVAVLCLVGGAGTWFFFFRHHGD--ESHAEAPPPKPPAFVDVPEMLVNLVGAPG 107 Query: 60 VLQAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 Y VK+ V D + TD T + D + G L+++ Sbjct: 108 ERVQYLKVKVVLEVKDEPQVETIKPALPRVTDLFQTYMRELRPSDLN--GSAGLFRLKEE 165 Query: 117 IKEDLNSRLGSQFISEVLIDE 137 + + +N+ + ++ VL E Sbjct: 166 LTKRVNTAISPGHVNAVLFKE 186 >gi|15606899|ref|NP_214280.1| flagellar biosynthesis FliL [Aquifex aeolicus VF5] gi|6225363|sp|O67712|FLIL_AQUAE RecName: Full=Flagellar protein FliL gi|2984141|gb|AAC07676.1| flagellar biosynthesis FliL [Aquifex aeolicus VF5] Length = 161 Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 15/124 (12%), Positives = 46/124 (37%), Gaps = 5/124 (4%) Query: 19 FYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQE 78 ++ LF + + E + + K + I ++++ Y + ++ V + Q Sbjct: 36 YFFLFAKKEEKKEEKAPKVAPPEVGIMYKLDPPFIVNLADPEATVYARISITLEVANQQV 95 Query: 79 RSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLI 135 ++ + D + ++S + + + L+ ++ + +N+ L + V Sbjct: 96 LQEVQKKEPVIRDAIIEIISSKTSNEIRTPEGR--EQLKLEVLKRINTILSEGGVRNVYF 153 Query: 136 DELN 139 E Sbjct: 154 TEFV 157 >gi|159045803|ref|YP_001534597.1| flagellar basal body-associated protein FliL [Dinoroseobacter shibae DFL 12] gi|157913563|gb|ABV94996.1| flagellar basal body-associated protein FliL [Dinoroseobacter shibae DFL 12] Length = 166 Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 40/144 (27%), Gaps = 11/144 (7%) Query: 4 FLFSGIWISVVTLI----SFYMLFLRSMDTMVENHVPPLAIKNTN--IIKSELVSIPSVS 57 FL G+ + + + Y + + T P + + + + + Sbjct: 24 FLIIGLVLLLAGGGGGFYAVYSGLILAPATETAETEPEPRDQGPEVAFVPLDPLVVTLGE 83 Query: 58 NGVLQAYFLVKLSFIVNDSQERSYLK--EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 NG +Y V E D L L D A LR Sbjct: 84 NGR-NSYLRFTAELEVESRYETEVAHLRPRVLDVLNGYLRAVQAQDLEAPAA--LARLRS 140 Query: 116 KIKEDLNSRLGSQFISEVLIDELN 139 ++ + G + ++L+ E Sbjct: 141 QMLHRVQIVTGEGRVRDLLVTEFV 164 >gi|262273513|ref|ZP_06051327.1| flagellar basal body-associated protein FliL [Grimontia hollisae CIP 101886] gi|262222491|gb|EEY73802.1| flagellar basal body-associated protein FliL [Grimontia hollisae CIP 101886] Length = 163 Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 18/142 (12%), Positives = 53/142 (37%), Gaps = 10/142 (7%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENH----VPPLAIKNTNIIKSELVSIPSVSNG 59 + +G+ ++ + + + P +K + + + G Sbjct: 18 VVVAGVVFLLLAVGGWLFYAQWKESVVEVKEETEVAPTAMVKKPKFLSMPRFVVS-LEGG 76 Query: 60 VLQAYFLVKLS---FIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF--DNLR 114 Y ++++S + +D ++ + + + + LL+G + + A +++R Sbjct: 77 SRLHYLMLEMSLMSYEEDDLKKMEDMMPVLRNTVVKLLNGKHFNELSKAGALPALEEDIR 136 Query: 115 KKIKEDLNSRLGSQFISEVLID 136 ++E +N G + + VLI Sbjct: 137 NALQERMNEMTGGKGVERVLIT 158 >gi|322421725|ref|YP_004200948.1| flagellar basal body-associated protein FliL [Geobacter sp. M18] gi|320128112|gb|ADW15672.1| flagellar basal body-associated protein FliL [Geobacter sp. M18] Length = 174 Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 20/157 (12%), Positives = 50/157 (31%), Gaps = 24/157 (15%) Query: 4 FLFSGIWI--SVVTLISFYMLFLRSMDTMVENHVPPLAIKNT----------------NI 45 F+ G + + + + + + E + I Sbjct: 19 FIIIGAVVGVLAIGGAAAFFMGGSKKEKAPEGAKVEAKAEGGHGAPAKEGEGGAAVGGTI 78 Query: 46 IKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDF 102 E + ++ +G Y +K+ F + + Q + L D + LL+ M + Sbjct: 79 YPLEPFIV-NIYDGQELRYLKLKVEFEMANPQAKGELDAKMAPLRDAILILLTTKTMQEI 137 Query: 103 VQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ LR++I ++ + I++V + Sbjct: 138 QDLQGKN--QLREQILAAVSKVVPPSKITKVYFTDFV 172 >gi|126438457|ref|YP_001057083.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 668] gi|167813511|ref|ZP_02445191.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 91] gi|126217950|gb|ABN81456.1| flagellar basal body-associated protein FliL [Burkholderia pseudomallei 668] Length = 165 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 43/145 (29%), Gaps = 10/145 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + FL GI + Y L P + E +++ +S+ + Sbjct: 22 VLFLLIGIVAAAAAAGGTYF-MLSKEGAHSAAPSAPAPLAAPAFFPLEPLTVNLLSDDGI 80 Query: 62 QAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 Q Y V LS + D + + Y + LS ++ L ++K Sbjct: 81 QHYLRVGLSLKLTDPKAQEYLTQHMPELRSRILLALSNKHPEQLATLEGK--HALADELK 138 Query: 119 EDLNSRLGSQ----FISEVLIDELN 139 + + +VL E Sbjct: 139 TLIEQPTQPGNQSARVDDVLFTEFV 163 >gi|260893867|ref|YP_003239964.1| flagellar basal body-associated protein FliL [Ammonifex degensii KC4] gi|260866008|gb|ACX53114.1| flagellar basal body-associated protein FliL [Ammonifex degensii KC4] Length = 148 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 17/131 (12%), Positives = 48/131 (36%), Gaps = 10/131 (7%) Query: 12 SVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSF 71 + V+ ++ + + P + + + + ++++G Y V + Sbjct: 21 AGVSGGGIFLGVKLAGG---KKPAQPPPPPPLKTVSLDSIVV-NLADGDTNHYLRVTVVL 76 Query: 72 IVN-DSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGS 127 V D + ++ D + LL + ++ L++++K+ +N+ LG Sbjct: 77 AVPADEKLAKEIEGKKFELRDLIIQLLRHKTFAEVMKPDY--PTKLKEELKQKINAYLGG 134 Query: 128 QFISEVLIDEL 138 + E+ E Sbjct: 135 DKVKEIYFTEY 145 >gi|221201775|ref|ZP_03574812.1| flagellar basal body-associated protein FliL [Burkholderia multivorans CGD2M] gi|221207720|ref|ZP_03580728.1| flagellar basal body-associated protein FliL [Burkholderia multivorans CGD2] gi|221172566|gb|EEE05005.1| flagellar basal body-associated protein FliL [Burkholderia multivorans CGD2] gi|221178195|gb|EEE10605.1| flagellar basal body-associated protein FliL [Burkholderia multivorans CGD2M] Length = 165 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 35/126 (27%), Gaps = 9/126 (7%) Query: 21 MLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERS 80 M P + + +++ S+ +Q Y V LS + D + + Sbjct: 40 MYVFMGRQGATHASAEPAPLAAPVFFPLDPLTVNLQSDDGVQHYLRVGLSLKLTDPKAQE 99 Query: 81 YL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQ----FISEV 133 L + LS D L ++++ + + +V Sbjct: 100 QLTARMPEIRSRVLLALSNKHPEDIATPDGK--QALAQQLRNLIEEPTQPGNQRTKVDDV 157 Query: 134 LIDELN 139 L E Sbjct: 158 LFTEFV 163 >gi|302343738|ref|YP_003808267.1| flagellar basal body-associated protein FliL [Desulfarculus baarsii DSM 2075] gi|301640351|gb|ADK85673.1| flagellar basal body-associated protein FliL [Desulfarculus baarsii DSM 2075] Length = 189 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 18/165 (10%), Positives = 49/165 (29%), Gaps = 30/165 (18%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSM-----------------------DTMVENHVPPL 38 +K + +V + + + + + Sbjct: 26 MKLIIIVAVGLIVLFGAGFGAWWFLLAGDDAPPPEAAPAAQQGQAPAEGAAPAQGQEGAA 85 Query: 39 AIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLS 95 K I++ E + ++++ + Y + ++ D + ++ + D + LL+ Sbjct: 86 QEKPGTIVQLEPFVV-NLADPGGKRYLKLTMAVDAGDEKLKAEIDARLPQIRDSILLLLT 144 Query: 96 GPPMGDFVQIKAFGFDNLRKKIKEDLNSRL-GSQFISEVLIDELN 139 D ++ LR ++ N L G+ + V E Sbjct: 145 SKAYQDIAEVAGK--IRLRTEVLAIFNRYLAGAGSVHAVYFSEFV 187 >gi|292669772|ref|ZP_06603198.1| flagellar basal body-associated protein FliL [Selenomonas noxia ATCC 43541] gi|292648569|gb|EFF66541.1| flagellar basal body-associated protein FliL [Selenomonas noxia ATCC 43541] Length = 173 Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 24/136 (17%), Positives = 43/136 (31%), Gaps = 16/136 (11%) Query: 16 LISFYMLFLRSMDTMVENHV--PPLAIKNTNIIKSELV---SIPSVSNGVLQAYFLVKLS 70 Y +F ++ + K + +V G + + Sbjct: 38 GGISYYIFSQTESPLHSEDGGGSGSHRDPGVFYKLGDPKEGILVNVGGGRAGKFLKAGIV 97 Query: 71 FIVN--------DSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN 122 +N D + S + D L P+ +F K D L+K++K+ LN Sbjct: 98 LELNPGKSENVTDGKVGSVAETKILDTTMQFLRAAPLEEFDASKQ---DALKKQLKDALN 154 Query: 123 SRLGSQFISEVLIDEL 138 RLG + +V I Sbjct: 155 ERLGQGSVYDVYITSF 170 >gi|254463245|ref|ZP_05076661.1| conserved hypothetical protein [Rhodobacterales bacterium HTCC2083] gi|206679834|gb|EDZ44321.1| conserved hypothetical protein [Rhodobacteraceae bacterium HTCC2083] Length = 173 Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats. Identities = 21/119 (17%), Positives = 42/119 (35%), Gaps = 9/119 (7%) Query: 28 DTMVENHVPPLAIKNT--NIIKS-ELVSIPSVSNGVLQAYFLVKLSFIVNDSQERS--YL 82 E P A +N +K +P + ++++ +V LS V + + Sbjct: 51 SRGEETAKEPNAPENLSFEYVKLTNQFIVPVIKGDIVRSVAIVALSLEVETGTKEKVYKV 110 Query: 83 KEIATDYLYTLLSGPPMG---DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + D L D +RK +K+ S LG +++VL+ ++ Sbjct: 111 EPKLRDTFLQALFDHASLGGFDGAFATTENLIRMRKALKQAATSVLG-DVVNDVLVTDI 168 >gi|325917741|ref|ZP_08179928.1| flagellar basal body-associated protein [Xanthomonas vesicatoria ATCC 35937] gi|325536040|gb|EGD07849.1| flagellar basal body-associated protein [Xanthomonas vesicatoria ATCC 35937] Length = 206 Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 20/148 (13%), Positives = 46/148 (31%), Gaps = 11/148 (7%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK---NTNIIKSELVSIPSVSN 58 L + G+ + + D H P + + + ++++ Sbjct: 58 LLLIAIGVVVLAAAGGGAWFFLGHKGDEKGGKHDAPKVAEVPKPAQYFPMDPAIVVNLAD 117 Query: 59 -GVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQI---KAFGFD 111 G Y V++ + D +E + +L LLS D + + Sbjct: 118 PGDGPQYLQVEVQLVTRDPEELKLITENAPAIRAHLLMLLSQTKAADVADLAGKQKLQKA 177 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDELN 139 L + ++ + S G + + E+L Sbjct: 178 ALTEA-QKVMTSETGKKCVEELLFTSFV 204 >gi|126738565|ref|ZP_01754270.1| flagellar basal body-associated protein FliL [Roseobacter sp. SK209-2-6] gi|126720364|gb|EBA17070.1| flagellar basal body-associated protein FliL [Roseobacter sp. SK209-2-6] Length = 175 Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 3/114 (2%) Query: 27 MDTMVENHVPPLAIKNTNIIKSELVSIPS-VSNGVLQAYFLVKLSFIVNDSQERSYLKEI 85 V++ + N I E + I ++G+ F +L + + + Sbjct: 62 APEGVDSGETAEDLANLAFIDMEPIVITLRKASGLKHLRFRAQLEVDIANQAAVEKVLPR 121 Query: 86 ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 D L + L + D LR ++ +N G + ++LI + Sbjct: 122 VVDVLNSYLRALELEDLTDP--MALPKLRAQMLRRINIATGQGRVRDLLIMDFV 173 >gi|94264050|ref|ZP_01287850.1| Flagellar basal body-associated protein FliL [delta proteobacterium MLMS-1] gi|94269367|ref|ZP_01291444.1| Flagellar basal body-associated protein FliL [delta proteobacterium MLMS-1] gi|93451248|gb|EAT02145.1| Flagellar basal body-associated protein FliL [delta proteobacterium MLMS-1] gi|93455561|gb|EAT05748.1| Flagellar basal body-associated protein FliL [delta proteobacterium MLMS-1] Length = 196 Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 12/123 (9%), Positives = 40/123 (32%), Gaps = 9/123 (7%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQE- 78 + + + + + P + + S I ++++ + Y +++ + + Sbjct: 78 FFAYTTFLAPVADEDAP----EEMGYVLSLEPFIINLADPTGKRYLKIQVEIELESERAW 133 Query: 79 --RSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLID 136 D + L+S + + + +R +++E N + + V Sbjct: 134 ERAERNIPRLRDNVIMLISSLSFEEVMTPEGK--IRIRDELQERFNVVMRPDRVRNVYFS 191 Query: 137 ELN 139 E Sbjct: 192 EFV 194 >gi|313682720|ref|YP_004060458.1| flagellar basal body-associated protein flil [Sulfuricurvum kujiense DSM 16994] gi|313155580|gb|ADR34258.1| flagellar basal body-associated protein FliL [Sulfuricurvum kujiense DSM 16994] Length = 189 Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 19/170 (11%), Positives = 53/170 (31%), Gaps = 34/170 (20%) Query: 1 MLKFLFSGIWISVVTLIS--FYMLFLRSMDTMVENHVP---------------------- 36 ML + G+ ++ + +++ H Sbjct: 21 MLLIIIIGVLALILIIGGIVAFLMMGNHDAEAEAGHAKTEVAADSHSAEAEHSGEGSGGT 80 Query: 37 PLAIKNTNII----KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER---SYLKEIATDY 89 P+ + + + ++ +S + Y +++ + + K I D Sbjct: 81 PMGGEVMTEVGLMFPLDGFTVNLLSE-SGRRYLKCEINLEMGGEELSPELEEKKPIFRDI 139 Query: 90 LYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + +LS + + +K + L+++I +LN RL + + + Sbjct: 140 IIRILSSKSLEEISTVKGK--EKLKEQIVNELNLRLKDGKVKNIYFTDFV 187 >gi|167834864|ref|ZP_02461747.1| flagellar basal body-associated protein FliL [Burkholderia thailandensis MSMB43] Length = 165 Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 41/145 (28%), Gaps = 10/145 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + FL GI + Y L P + E +++ S+ Sbjct: 22 VLFLLIGIVAAAAAAGGTYF-VLSKEGARGAAPSAPPPLAVPVFFALEPLTVNLQSDDGA 80 Query: 62 QAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 Q Y V LS + D + + Y + LS ++ L ++K Sbjct: 81 QHYLRVGLSLKLTDPKAQEYLTQHMPELRSRILLALSNKHPEQLATLEGK--HALADELK 138 Query: 119 EDLNSRLGSQ----FISEVLIDELN 139 + + +VL E Sbjct: 139 TLIEQPTQPGNLSARVDDVLFTEFV 163 >gi|218681908|ref|ZP_03529587.1| hypothetical protein RetlC8_24020 [Rhizobium etli CIAT 894] Length = 79 Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 18/64 (28%), Positives = 36/64 (56%), Gaps = 3/64 (4%) Query: 100 GDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASD 159 D IK+F R +IK+ +N RLG +++++V++++L+YLS D++ + Sbjct: 1 VDIAHIKSFDPKAFRDEIKKGMNERLGGEYVADVMLEQLDYLSKEDVKES---SAGQPKK 57 Query: 160 LMTQ 163 + T Sbjct: 58 VSTP 61 >gi|319790415|ref|YP_004152048.1| flagellar basal body-associated protein FliL [Thermovibrio ammonificans HB-1] gi|317114917|gb|ADU97407.1| flagellar basal body-associated protein FliL [Thermovibrio ammonificans HB-1] Length = 170 Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 17/126 (13%), Positives = 43/126 (34%), Gaps = 10/126 (7%) Query: 21 MLFLRSMDTMVENHVPPLAIKNTNIIKSELVS-----IPSVSNGVLQAYFLVKLSFIVND 75 L L E + + ++ + ++++ ++ Y V + + D Sbjct: 42 FLVLDKKAQSKEKQAQKIIEEIKATENVGVMFDLGTFVVNLADPDIERYLKVSIVLELKD 101 Query: 76 SQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISE 132 + + + D + TLL + + F L+++I + +N+ L + Sbjct: 102 QKVQQEAQKRLPEIKDAITTLLLTKKSSEIRTPEGIEF--LKEEIAKRVNAILPLGGVKN 159 Query: 133 VLIDEL 138 V E Sbjct: 160 VYFTEF 165 >gi|221640822|ref|YP_002527084.1| hypothetical protein RSKD131_2723 [Rhodobacter sphaeroides KD131] gi|221161603|gb|ACM02583.1| Hypothetical Protein RSKD131_2723 [Rhodobacter sphaeroides KD131] Length = 171 Score = 65.1 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 20/131 (15%), Positives = 38/131 (29%), Gaps = 7/131 (5%) Query: 14 VTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSE-LVSIPSVSNGVLQAYFLVKLSFI 72 T + K +P + +G + + ++ LS Sbjct: 37 ATGGEGAANAHAPAAEPAAEGHSANPEEQPEYAKLNNQFIVPIIEDGRVASMVILSLSLE 96 Query: 73 VNDSQERSYL--KEIATDYLYTLLSGPPMG---DFVQIKAFGFDNLRKKIKEDLNSRLGS 127 V + D + ++L +A LR+ + E S LG Sbjct: 97 VPPGGTEQVYAVEPKLRDGMLSVLFDHANAGGFRGAFTEAANLVALRRALLEVARSVLGP 156 Query: 128 QFISEVLIDEL 138 I +VLI ++ Sbjct: 157 TAI-DVLITDI 166 >gi|85715054|ref|ZP_01046039.1| Flagellar basal body-associated protein FliL [Nitrobacter sp. Nb-311A] gi|85698251|gb|EAQ36123.1| Flagellar basal body-associated protein FliL [Nitrobacter sp. Nb-311A] Length = 163 Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats. Identities = 25/138 (18%), Positives = 46/138 (33%), Gaps = 8/138 (5%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS-NGVLQ 62 G+ + +VT S + R E H K + + + V G Sbjct: 26 IAVVGLALILVTGGSVWFFLFRHHG--GEQHAEAPPPKPPAFVDIPDMLVNLVGAPGERV 83 Query: 63 AYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 Y VK+ V + + ++ TD T + D + G L++++ Sbjct: 84 QYLKVKVVLEVKEEPQAEKIRPALPRVTDLFQTYMRELRPSDLN--GSAGLFRLKEELTR 141 Query: 120 DLNSRLGSQFISEVLIDE 137 +N + I+ VL E Sbjct: 142 RVNEVISPDHINAVLFKE 159 >gi|254251030|ref|ZP_04944348.1| flagellar basal body protein [Burkholderia dolosa AUO158] gi|124893639|gb|EAY67519.1| flagellar basal body protein [Burkholderia dolosa AUO158] Length = 178 Score = 64.7 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 37/127 (29%), Gaps = 9/127 (7%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER 79 Y+ + P + + +++ S+ Q Y V LS + D + + Sbjct: 52 YVFLNKQGVGHPAASAEPAPLAAPVFFPLDPLTVNLQSDDGGQHYLRVGLSLKLTDPKAQ 111 Query: 80 SYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQ----FISE 132 L + LS + L K+++E + I + Sbjct: 112 EQLTARMPEIRSRILLALSNKHPEELATPDGK--RTLAKELRELIEQPTQPGNQRAKIDD 169 Query: 133 VLIDELN 139 VL E Sbjct: 170 VLFTEFV 176 >gi|312962267|ref|ZP_07776759.1| flagellar basal body-associated protein FliL [Pseudomonas fluorescens WH6] gi|311283604|gb|EFQ62193.1| flagellar basal body-associated protein FliL [Pseudomonas fluorescens WH6] Length = 168 Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 14/145 (9%), Positives = 39/145 (26%), Gaps = 7/145 (4%) Query: 2 LKFLFSGIWISV-VTLISFYMLF-LRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59 + + G+ +++ ++ + + + A + + + + Sbjct: 22 ILMIVVGLLLAIGASVGGTWYIMHSSASKPAPVAEAATNAKQPAIFEPMLPAFVANFNQN 81 Query: 60 VLQAYFLVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF--DNLR 114 Q Y V ++ + + + + L L SG + Sbjct: 82 GRQRYLQVSITLLARNQADLEALKVHMPVIRNNLVMLFSGQSFDTLATPVGQEMLRQKVT 141 Query: 115 KKIKEDLNSRLGSQFISEVLIDELN 139 ++E LG I + L Sbjct: 142 ASVQEVAQKELGKVVIEQALFTNFV 166 >gi|302035576|ref|YP_003795898.1| hypothetical protein NIDE0187 [Candidatus Nitrospira defluvii] gi|300603640|emb|CBK39971.1| protein of unknown function, similar to FliL [Candidatus Nitrospira defluvii] Length = 182 Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 24/143 (16%), Positives = 42/143 (29%), Gaps = 12/143 (8%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVE------NHVPPLAIKNTNIIKSELVSIPSVSN 58 L I+V+ L+ Y+ D + P + I V P + Sbjct: 36 LIVLFSIAVILLLVGYLAGQYHPDLLPHTFSLQTAPPDPSQGQPGVTINLPPVVAPV-DD 94 Query: 59 GVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 G Y V L+ ++ S ++ + +L + D LR Sbjct: 95 GQRYYYVQVNLALELDRSGTAGLIQARHDAIDRQVMEILHTYAVSDLRASGQ--LPALRA 152 Query: 116 KIKEDLNSRLGSQFISEVLIDEL 138 I+ +N L + V I Sbjct: 153 DIRRAINKLLPKGQVQNVYITNW 175 >gi|237752089|ref|ZP_04582569.1| flagellar basal body-associated protein FliL [Helicobacter winghamensis ATCC BAA-430] gi|229376656|gb|EEO26747.1| flagellar basal body-associated protein FliL [Helicobacter winghamensis ATCC BAA-430] Length = 178 Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 54/160 (33%), Gaps = 23/160 (14%) Query: 1 MLKFLFSGIW-----ISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNII--------- 46 M+ F+ G+ I +V I + S V A + Sbjct: 19 MILFIIIGVVALLLIIFIVVGILIFSGGNESEQAGVAPQTQQSAANKGSTANPNSSLLSV 78 Query: 47 ----KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPM 99 + + +++G + Y ++ ++ + ++ L +++ D + T+LS Sbjct: 79 GPMYPLDQFIVNLLASGGGKRYLKTSIALELSIPEMQAELDIKRDVLRDTVITILSSKTF 138 Query: 100 GDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + K L++++ E +N L + + E Sbjct: 139 EEVQTAKGK--QKLKEEMMERINEFLVDGRVVNMFFTEFV 176 >gi|195953028|ref|YP_002121318.1| flagellar basal body-associated protein FliL [Hydrogenobaculum sp. Y04AAS1] gi|195932640|gb|ACG57340.1| flagellar basal body-associated protein FliL [Hydrogenobaculum sp. Y04AAS1] Length = 161 Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 13/127 (10%), Positives = 41/127 (32%), Gaps = 7/127 (5%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN 74 Y + + V + ++++ Y V ++ ++ Sbjct: 34 GGAGAYFFLIHKKRESTKQMVVASQKLGVMY-NLGSFLV-NLADKNANTYAKVSITLELS 91 Query: 75 DSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFIS 131 + + + + I D + LLS + + + LR ++ + +N+ L + + Sbjct: 92 NEKVQQEVVKRLPIIKDAIINLLSSKTYDEIRTPEGK--EELRLELIKRINAILVTGGVQ 149 Query: 132 EVLIDEL 138 + + Sbjct: 150 NIYFTQF 156 >gi|58582230|ref|YP_201246.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84624123|ref|YP_451495.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188576790|ref|YP_001913719.1| flagellar basal body-associated protein FliL [Xanthomonas oryzae pv. oryzae PXO99A] gi|188576982|ref|YP_001913911.1| flagellar basal body-associated protein FliL [Xanthomonas oryzae pv. oryzae PXO99A] gi|58426824|gb|AAW75861.1| flagellar protein [Xanthomonas oryzae pv. oryzae KACC10331] gi|84368063|dbj|BAE69221.1| flagellar protein [Xanthomonas oryzae pv. oryzae MAFF 311018] gi|188521242|gb|ACD59187.1| flagellar basal body-associated protein FliL [Xanthomonas oryzae pv. oryzae PXO99A] gi|188521434|gb|ACD59379.1| flagellar basal body-associated protein FliL [Xanthomonas oryzae pv. oryzae PXO99A] Length = 174 Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 48/146 (32%), Gaps = 8/146 (5%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLA--IKNTNIIKSELVSIPSVSN- 58 + + G+ + + D + H P +A K + + ++++ Sbjct: 27 ILLVAIGVVVLAAAGGGAWFFLGHKADDKGDKHAPKVAEVPKPAQYFPMDPAIVVNLADP 86 Query: 59 GVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQI--KAFGFDNL 113 G Y V++ + D +E + +L LLS D + K Sbjct: 87 GDGPQYLQVEVQLVTRDPEELKLITENAPAIRAHLLMLLSQTKATDVADLAGKQKLQKAA 146 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELN 139 + ++ + S G + + E+L Sbjct: 147 LAETQKVMTSETGKKCVEELLFTSFV 172 >gi|320529423|ref|ZP_08030511.1| flagellar basal body-associated protein FliL [Selenomonas artemidis F0399] gi|320138389|gb|EFW30283.1| flagellar basal body-associated protein FliL [Selenomonas artemidis F0399] Length = 173 Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 42/136 (30%), Gaps = 16/136 (11%) Query: 16 LISFYMLFLRSMDTMVENHVP--PLAIKNTNIIKSELV---SIPSVSNGVLQAYFLVKLS 70 Y +F ++ K + +V G + + Sbjct: 38 GGISYYIFSQAESPSHAEESGSGASHHDPGVFYKLGDAKEGVLVNVGGGRAGKFLKAGIV 97 Query: 71 FIVNDSQERSY--------LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN 122 +N ++ + + D L P+ +F K D L+K++K+ LN Sbjct: 98 LELNPGKKDNVVDGKVGSVAETKILDTTMQFLRAAPLEEFDASKQ---DELKKQLKDALN 154 Query: 123 SRLGSQFISEVLIDEL 138 RLG + +V I Sbjct: 155 DRLGQGSVYDVYITSF 170 >gi|260429247|ref|ZP_05783224.1| flagellar basal body-associated protein FliL [Citreicella sp. SE45] gi|260419870|gb|EEX13123.1| flagellar basal body-associated protein FliL [Citreicella sp. SE45] Length = 185 Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 21/112 (18%), Positives = 33/112 (29%), Gaps = 5/112 (4%) Query: 30 MVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY--LKEIAT 87 ++H PL N I+ + I + S V S LK Sbjct: 75 AADDHGAPLPDANVAFIEMPQLIISM-GPSSDMHHLRFLASLEVPPSHMAEVESLKPRVV 133 Query: 88 DYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 D L L D A +R ++ + G + ++LI E Sbjct: 134 DVLNNYLRALHPSDIEAPGA--LIRIRSQMLRRVQLVAGEDRVRDLLIMEFV 183 >gi|313895922|ref|ZP_07829476.1| flagellar basal body-associated protein FliL [Selenomonas sp. oral taxon 137 str. F0430] gi|312975347|gb|EFR40808.1| flagellar basal body-associated protein FliL [Selenomonas sp. oral taxon 137 str. F0430] Length = 172 Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 42/136 (30%), Gaps = 16/136 (11%) Query: 16 LISFYMLFLRSMDTMVENHVP--PLAIKNTNIIKSELV---SIPSVSNGVLQAYFLVKLS 70 Y +F ++ K + +V G + + Sbjct: 37 GGISYYIFSQAESPSHAEESGSGASHHDPGVFYKLGDAKEGVLVNVGGGRAGKFLKAGIV 96 Query: 71 FIVNDSQERSY--------LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN 122 +N ++ + + D L P+ +F K D L+K++K+ LN Sbjct: 97 LELNPGKKDNVVDGKVGSVAETKILDTTMQFLRAAPLEEFDASKQ---DELKKQLKDALN 153 Query: 123 SRLGSQFISEVLIDEL 138 RLG + +V I Sbjct: 154 DRLGQGSVYDVYITSF 169 >gi|223040577|ref|ZP_03610848.1| flagellar basal body-associated protein FliL [Campylobacter rectus RM3267] gi|222878125|gb|EEF13235.1| flagellar basal body-associated protein FliL [Campylobacter rectus RM3267] Length = 174 Score = 64.3 bits (155), Expect = 7e-09, Method: Composition-based stats. Identities = 17/120 (14%), Positives = 34/120 (28%), Gaps = 6/120 (5%) Query: 23 FLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL 82 M I I + + +S+ Y K+ ++ S + Sbjct: 56 VQTPMSKNTMGKRSSDYINMGPIYPLDQFIVNLLSD-SGSRYLKTKVDLELSAESLTSEI 114 Query: 83 K---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + D + + LS + K L+ +I + LN L I + + Sbjct: 115 DKKKPLVRDIIVSTLSSKTYEEVSTQKGKN--RLKDEIVDRLNEVLADGHIKNIYFTDFV 172 >gi|291613062|ref|YP_003523219.1| flagellar basal body-associated protein FliL [Sideroxydans lithotrophicus ES-1] gi|291583174|gb|ADE10832.1| flagellar basal body-associated protein FliL [Sideroxydans lithotrophicus ES-1] Length = 209 Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 31/130 (23%), Gaps = 8/130 (6%) Query: 3 KFLFSGIWISVVTLISF---YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59 K L GI + + + Y S I ++ Sbjct: 28 KMLIIGIVLLLAAVGGGAAWYFTRGSSPADGHAEAAKAETPVEAKFIPLGENFTVNLQRE 87 Query: 60 VLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 Y ++ V + L L LLS + + L + Sbjct: 88 EGDQYLQAGITLKVLKPELEEKIKALMPEIRSKLLFLLSSKKPSELQTSEGK--KKLVAE 145 Query: 117 IKEDLNSRLG 126 I + N LG Sbjct: 146 IIAETNGVLG 155 >gi|303326578|ref|ZP_07357021.1| flagellar basal body-associated protein FliL [Desulfovibrio sp. 3_1_syn3] gi|302864494|gb|EFL87425.1| flagellar basal body-associated protein FliL [Desulfovibrio sp. 3_1_syn3] Length = 113 Score = 63.9 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 38/114 (33%), Gaps = 5/114 (4%) Query: 28 DTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDS--QERSYLKEI 85 D L ++ +++ ++S+ + Y + + VN + Sbjct: 1 DAPRIERQSDLPRSAGLVLPLPPITV-NLSDPGGRRYLKLGMEVEVNADVSEALKAQNAR 59 Query: 86 ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 D + LL+G D L+ ++ LN LG+Q + V + Sbjct: 60 IRDAVIMLLAGKSFTDIATPDGKVL--LKAEVAARLNQILGAQRVIRVYFTDFV 111 >gi|316932825|ref|YP_004107807.1| flagellar basal body-associated protein FliL [Rhodopseudomonas palustris DX-1] gi|315600539|gb|ADU43074.1| flagellar basal body-associated protein FliL [Rhodopseudomonas palustris DX-1] Length = 166 Score = 63.9 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 45/142 (31%), Gaps = 9/142 (6%) Query: 3 KFLFSGIWISVV---TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS-N 58 K + G ++V + E+ A+K + I+ + + Sbjct: 23 KLIIIGAAAALVLIGGGGGAWFFLSAGHHKEAEHAEAAKAVKPPSFIEVPEIMVNLAGTP 82 Query: 59 GVLQAYFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 G Y K+ V D + TD T L GD + G +++ Sbjct: 83 GERVQYLKAKVVLEVKDEKLVEQIKPNMPRITDLFQTYLRELRSGDLN--GSVGMFRMKE 140 Query: 116 KIKEDLNSRLGSQFISEVLIDE 137 ++ +N + ++ VL E Sbjct: 141 ELTRRVNMAIAPSQVTAVLFKE 162 >gi|167630300|ref|YP_001680799.1| flagellar basal body-associated protein flil, putative [Heliobacterium modesticaldum Ice1] gi|167593040|gb|ABZ84788.1| flagellar basal body-associated protein flil, putative [Heliobacterium modesticaldum Ice1] Length = 161 Score = 63.9 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 45/128 (35%), Gaps = 10/128 (7%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER 79 + F+ + ++ + ++++ + + K+ +N+ ++ Sbjct: 36 FKFFISPDAVSDHTPKAAAPKTVGVLFEAGDFTT-NLADPGGKRFLKAKVILELNEEKKD 94 Query: 80 SY-------LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISE 132 + D + +LS + DF ++ + ++K I LN + G+ Sbjct: 95 EKKLAELKEQLPVIRDRILYILSAKTVEDFQVTESK--EKVKKDILVALNKQFGADKFRN 152 Query: 133 VLIDELNY 140 V EL Y Sbjct: 153 VYFQELVY 160 >gi|289578423|ref|YP_003477050.1| flagellar basal body-associated protein FliL [Thermoanaerobacter italicus Ab9] gi|297544699|ref|YP_003677001.1| flagellar basal body-associated protein FliL [Thermoanaerobacter mathranii subsp. mathranii str. A3] gi|289528136|gb|ADD02488.1| flagellar basal body-associated protein FliL [Thermoanaerobacter italicus Ab9] gi|296842474|gb|ADH60990.1| flagellar basal body-associated protein FliL [Thermoanaerobacter mathranii subsp. mathranii str. A3] Length = 131 Score = 63.9 bits (154), Expect = 9e-09, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 38/139 (27%), Gaps = 17/139 (12%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K + I V++ + F I N + Sbjct: 4 KTILIVIVAVVLSFGVAFWYFNAKAHQE---------ITYYNYSPGGEFITNLKGE---E 51 Query: 63 AYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 + + V D L+E D + +L + + + L+ IK Sbjct: 52 KFVKATVQLQVADKNILKTLEERNSEIRDLIIQILRSKTAQEVEGPEGQ--EKLKNDIKN 109 Query: 120 DLNSRLGSQFISEVLIDEL 138 +N +G + I V DE Sbjct: 110 GINKIIGEEKIINVYFDEF 128 >gi|114764043|ref|ZP_01443282.1| flagellar basal body-associated protein FliL [Pelagibaca bermudensis HTCC2601] gi|114543401|gb|EAU46416.1| flagellar basal body-associated protein FliL [Roseovarius sp. HTCC2601] Length = 182 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 32/109 (29%), Gaps = 5/109 (4%) Query: 33 NHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY--LKEIATDYL 90 + PL N ++ E + I + + S V L D L Sbjct: 75 DPALPLPDTNVAFVELEPLVISM-GTIAELHHLRFRASLEVPPQYVAEVETLTPRVIDVL 133 Query: 91 YTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + L D A LR ++ + G I ++L+ E Sbjct: 134 NSYLRALRPSDIEAPGA--LIRLRSQMLRRIQMVAGEDRIRDLLVMEFV 180 >gi|302392383|ref|YP_003828203.1| flagellar basal body-associated protein FliL [Acetohalobium arabaticum DSM 5501] gi|302204460|gb|ADL13138.1| flagellar basal body-associated protein FliL [Acetohalobium arabaticum DSM 5501] Length = 149 Score = 63.5 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 16/130 (12%), Positives = 44/130 (33%), Gaps = 9/130 (6%) Query: 14 VTLISFYMLFLRSMDTMVENHVPPLAIKNT-NIIKSELVSIPSVSNGVLQAYFLVKLSFI 72 + + Y + + + ++ K+ ++ N + Y + L Sbjct: 23 IAAGTSYFMLQQLGGNSQSSSQASESVAELGPTHKAGEFTVNLSDN---RRYLRMNLVLE 79 Query: 73 VNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF 129 V++ + L D + +++ D G +LR++I+ +LN + Sbjct: 80 VSNKDVINKLETRNPQVRDAVISIVRTKKPQDIN--TQAGIKDLREQIRNELNKFIAEGK 137 Query: 130 ISEVLIDELN 139 ++ V + Sbjct: 138 VTNVFFTQFV 147 >gi|224373005|ref|YP_002607377.1| flagellar basal body-associated protein FliL [Nautilia profundicola AmH] gi|223588699|gb|ACM92435.1| flagellar basal body-associated protein FliL [Nautilia profundicola AmH] Length = 173 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 42/134 (31%), Gaps = 16/134 (11%) Query: 19 FYMLFLRSMDTMVENHVPPLAIKNTNII----------KSELVSIPSVSNGVLQAYFLVK 68 Y L + P I+ + + + VSN Y K Sbjct: 41 AYFLLSGGDEEQANQPQEPQKIEKKKKVENMTEIGPIYPLDQFIVNLVSNNS-SRYLKCK 99 Query: 69 LSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL 125 + ++ + + + D + +LS + + K + L+++IK +N L Sbjct: 100 IDLELDSPELQQEVDKKLPAIRDLIIRILSSKTVEEIQTAKGK--EKLKEEIKRKINELL 157 Query: 126 GSQFISEVLIDELN 139 + I V E Sbjct: 158 TTGEIRHVYFTEFV 171 >gi|166712026|ref|ZP_02243233.1| flagellar protein [Xanthomonas oryzae pv. oryzicola BLS256] Length = 174 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 46/146 (31%), Gaps = 8/146 (5%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLA--IKNTNIIKSELVSIPSVSN- 58 + + G+ + + D + H P +A K + + ++++ Sbjct: 27 ILLVAIGVVVLAAAGGGAWFFLGHKADDKGDKHAPKVAEVPKPAQYFPMDPAIVVNLADP 86 Query: 59 GVLQAYFLVKLSF---IVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQI--KAFGFDNL 113 G Y V++ + + + +L LLS D + K Sbjct: 87 GDGPHYLQVEVQLVTREPEELKLITENAPAIRAHLLMLLSQTKATDVADLAGKQKLQKAA 146 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELN 139 + ++ + S G + + E+L Sbjct: 147 LAETQKVMTSETGKKCVEELLFTSFV 172 >gi|242309009|ref|ZP_04808164.1| flagellar basal body-protein FliL [Helicobacter pullorum MIT 98-5489] gi|239524433|gb|EEQ64299.1| flagellar basal body-protein FliL [Helicobacter pullorum MIT 98-5489] Length = 177 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 22/159 (13%), Positives = 54/159 (33%), Gaps = 22/159 (13%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKN-----------------T 43 M+ F+ G+ ++ ++ + + S D +++ Sbjct: 19 MILFIIIGVVALLLIILIIVGILIFSGDKEESQPQSNQPLQSAASKSSTANPNSSLLSVG 78 Query: 44 NIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMG 100 + E + VS G + Y ++ ++ ++ + L +I D + T+LS Sbjct: 79 PMYPLEQFIVNLVSTGGGKRYLKTSIALEMSIAEMQPELDSKVDILRDTIITILSDKTFE 138 Query: 101 DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + + L+++I +N L I V + Sbjct: 139 EIQTTRGK--QKLKEEILARINEFLVDGRIVNVFFTDFV 175 >gi|289670555|ref|ZP_06491630.1| flagellar basal body-associated protein FliL [Xanthomonas campestris pv. musacearum NCPPB4381] Length = 175 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 46/147 (31%), Gaps = 9/147 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK---NTNIIKSELVSIPSVSN 58 + + G+ + + F D H P + + + ++++ Sbjct: 27 ILLVAIGVVVLAAAGGGAWFFFGHKDDEKDGKHAAPKVAEVPKPAQYFPMDPAIVVNLAD 86 Query: 59 -GVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQI--KAFGFDN 112 G Y V++ + D +E + +L LLS D + K Sbjct: 87 PGDGPQYLQVEVQLVTRDPEELKLITENAPAIRAHLLMLLSQTKATDVADLAGKQKLQKA 146 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELN 139 + ++ + S G + + E+L Sbjct: 147 ALAEAQKVMTSETGKKCVEELLFTSFV 173 >gi|91714690|gb|ABE54616.1| flagellar basal body-associated protein FliL [Shewanella denitrificans OS217] Length = 200 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 22/156 (14%), Positives = 45/156 (28%), Gaps = 21/156 (13%) Query: 3 KFLF---SGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK---------NTNIIKSEL 50 K + G+ + +V + L S + + P + N I Sbjct: 45 KLVLFGGIGLVLVLVIGAGLWFLMGSSDAPVADPDSDPSSAAAPAVKAPVAEANYISMPR 104 Query: 51 VSIPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKA 107 + ++ +K+ +V +D + D L T SG + Sbjct: 105 PFLFNLPGADRPRIVEIKVQLMVRGSDDGTLTQKHIPLIEDALLTTFSGADVQKLSTQAG 164 Query: 108 FGFDNLRK----KIKEDLNSRLGSQFISEVLIDELN 139 LR+ ++ L +G + +VL Sbjct: 165 KD--ELRQLALLNVQNTLQPVIGRTVVEKVLFTGFV 198 >gi|90021821|ref|YP_527648.1| flagellar basal body-associated protein FliL [Saccharophagus degradans 2-40] gi|89951421|gb|ABD81436.1| flagellar basal body-associated protein FliL [Saccharophagus degradans 2-40] Length = 180 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 15/150 (10%), Positives = 46/150 (30%), Gaps = 12/150 (8%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + + I +++ + + A + +K + + P ++ Sbjct: 29 IILAVVCLVIVGISVGGTLTVLKMTQPPAAPAEGEEGAAEPVEEVKKDAIYFPIKPEIIV 88 Query: 62 -------QAYFLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFD 111 Q Y ++ ++ D + + L ++ G + + Sbjct: 89 NYTARGRQRYLRTDITLLIRDVDVIAAIETHMPMIRNTLNMIIGGQVYQEIQTAEGKELM 148 Query: 112 NLR--KKIKEDLNSRLGSQFISEVLIDELN 139 + + ++++L + +G I EVL Sbjct: 149 RQQCLQALRKNLEAEIGKPGIEEVLFTSFV 178 >gi|311992315|gb|ADQ26731.1| flagellar basal-body associated protein [Aeromonas hydrophila] Length = 171 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 42/151 (27%), Gaps = 17/151 (11%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVEN--------HVPPLAIKNTNIIKSELVSIPS 55 + + I + + L D A + + + + + Sbjct: 21 MIIALAVIVLGGGGAGAWFMLSGGDKPAAEAAGEGKDAKPKEAAPQPSLYVGMPRPFVFN 80 Query: 56 VSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDN 112 VS G +K+ +V D + L + S + + + Sbjct: 81 VSGGQRDRLVQIKIQLMVRGTADETLAKQNIPLIEGTLLRVFSAATSEQLMTFEGK--EK 138 Query: 113 LR----KKIKEDLNSRLGSQFISEVLIDELN 139 LR ++ + LN + S I +VL Sbjct: 139 LRKDSLEECRRVLNDLVSSPVIEQVLFTGFV 169 >gi|291280093|ref|YP_003496928.1| flagellar FliL protein [Deferribacter desulfuricans SSM1] gi|290754795|dbj|BAI81172.1| flagellar FliL protein [Deferribacter desulfuricans SSM1] Length = 170 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 13/131 (9%), Positives = 40/131 (30%), Gaps = 10/131 (7%) Query: 17 ISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELV-----SIPSVSNGVLQAYFLVKLSF 71 + Y L+ + + I ++++ Y V + Sbjct: 40 GAAYFFVLKPKADNKAEAAAAKKKEVKAEPAIGPLYSLDTFIVNLADPGGTRYLKVTMQL 99 Query: 72 IVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQ 128 ++ + + ++ D + T+LS + + L++++ +N L + Sbjct: 100 ELDSEKVQEEMEKRKPQIRDVILTVLSSKTYAEVSTAQGKL--ALKQELIRRINLILTTG 157 Query: 129 FISEVLIDELN 139 + + E Sbjct: 158 SVKNIYFTEFV 168 >gi|218887302|ref|YP_002436623.1| flagellar basal body-associated protein FliL [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758256|gb|ACL09155.1| flagellar basal body-associated protein FliL [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 171 Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 40/116 (34%), Gaps = 6/116 (5%) Query: 25 RSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK- 83 + + +N + K + ++++ + Y + + V L+ Sbjct: 55 AKAEGKADAKGGEAPARNAKVAKLPTFLV-NLADPTGRRYLKLTMEVEVGSDATVKELEG 113 Query: 84 --EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 D + LLS D I++ L+ ++ E LN LG + V I E Sbjct: 114 QSAKVRDAVILLLSSKSYADLAPIESKL--QLKNEVAERLNQILGGPKVLRVYITE 167 >gi|117620848|ref|YP_855910.1| flagellar basal body-associated protein FliL [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117562255|gb|ABK39203.1| flagellar basal body-associated protein FliL [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 172 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 42/151 (27%), Gaps = 17/151 (11%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVEN--------HVPPLAIKNTNIIKSELVSIPS 55 + + I + + L D A + + + + + Sbjct: 22 MIIALAVIVLGGGGAGAWFMLSGGDKPAAEAAGEGKDAKPKEAAPQPSLYVGMPRPFVFN 81 Query: 56 VSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDN 112 VS G +K+ +V D + L + S + + + Sbjct: 82 VSGGQRDRLVQIKIQLMVRGTADETLAKQNIPLIEGTLLRVFSAATSEQLMTFEGK--EK 139 Query: 113 LR----KKIKEDLNSRLGSQFISEVLIDELN 139 LR ++ + LN + S I +VL Sbjct: 140 LRKDSLEECRRVLNDLVSSPVIEQVLFTGFV 170 >gi|94987084|ref|YP_595017.1| flagellar basal body-associated protein [Lawsonia intracellularis PHE/MN1-00] gi|94731333|emb|CAJ54696.1| Flagellar basal body-associated protein [Lawsonia intracellularis PHE/MN1-00] Length = 189 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 14/119 (11%), Positives = 38/119 (31%), Gaps = 6/119 (5%) Query: 24 LRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL- 82 + + P + V++ ++++ Y + + ++ + + L Sbjct: 72 NANKKEGGKGSSPTDPKPLLKPVSLPSVTV-NLADPSGSKYLRIGMDVELSSEEAITNLL 130 Query: 83 --KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 D + LLS + V + L+ ++ LN LG + + + Sbjct: 131 TQSARVRDAIILLLSSKTSDELVSAEGKVL--LKNEVASRLNQILGEPRVVRIYFTDFV 187 >gi|325920568|ref|ZP_08182490.1| flagellar basal body-associated protein [Xanthomonas gardneri ATCC 19865] gi|325548961|gb|EGD19893.1| flagellar basal body-associated protein [Xanthomonas gardneri ATCC 19865] Length = 183 Score = 63.1 bits (152), Expect = 2e-08, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 46/147 (31%), Gaps = 9/147 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK---NTNIIKSELVSIPSVSN 58 + + G+ + + F D H P + + + ++++ Sbjct: 35 ILLIAIGVVVLAAAGGGAWFFFGHKGDEKGGKHAAPKVAEVPKPAQYFPMDPAIVVNLAD 94 Query: 59 -GVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQI--KAFGFDN 112 G Y V++ + D +E + +L LLS D + K Sbjct: 95 PGDGPQYLQVEVQLVTRDPEELKLITENAPAIRAHLLMLLSQTKATDVADLVGKQKLQKA 154 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELN 139 + ++ + S G + + E+L Sbjct: 155 ALVEAQKVMTSETGKKCVEELLFTSFV 181 >gi|330808224|ref|YP_004352686.1| flagellar basal body-associated protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327376332|gb|AEA67682.1| flagellar basal body-associated protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 167 Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 17/145 (11%), Positives = 42/145 (28%), Gaps = 7/145 (4%) Query: 2 LKFLFSGIWISV-VTLISF-YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59 + + G+ +++ V++ + Y + V P+ + + + + Sbjct: 21 IIMIVVGLLLAIGVSVGATWYFMHSAQSKPAVAVEAAPVGKQPAIFEPMAPAFVANYTQN 80 Query: 60 VLQAYFLVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF--DNLR 114 Q Y V ++ + + + + L L SG Sbjct: 81 GRQRYMQVSITLLGRNQADLEALRVHMPLIRNNLVMLFSGQNFDTLATPVGQEMLRQKAT 140 Query: 115 KKIKEDLNSRLGSQFISEVLIDELN 139 ++E LG I ++L Sbjct: 141 ASVQEVAQKELGKVVIEQLLFTNFV 165 >gi|167037658|ref|YP_001665236.1| flagellar basal body-associated protein FliL [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|167040319|ref|YP_001663304.1| flagellar basal body-associated protein FliL [Thermoanaerobacter sp. X514] gi|256750751|ref|ZP_05491636.1| flagellar basal body-associated protein FliL [Thermoanaerobacter ethanolicus CCSD1] gi|300914403|ref|ZP_07131719.1| flagellar basal body-associated protein FliL [Thermoanaerobacter sp. X561] gi|307724361|ref|YP_003904112.1| flagellar basal body-associated protein FliL [Thermoanaerobacter sp. X513] gi|320116073|ref|YP_004186232.1| flagellar basal body-associated protein FliL [Thermoanaerobacter brockii subsp. finnii Ako-1] gi|166854559|gb|ABY92968.1| flagellar basal body-associated protein FliL [Thermoanaerobacter sp. X514] gi|166856492|gb|ABY94900.1| flagellar basal body-associated protein FliL [Thermoanaerobacter pseudethanolicus ATCC 33223] gi|256750334|gb|EEU63353.1| flagellar basal body-associated protein FliL [Thermoanaerobacter ethanolicus CCSD1] gi|300889338|gb|EFK84484.1| flagellar basal body-associated protein FliL [Thermoanaerobacter sp. X561] gi|307581422|gb|ADN54821.1| flagellar basal body-associated protein FliL [Thermoanaerobacter sp. X513] gi|319929164|gb|ADV79849.1| flagellar basal body-associated protein FliL [Thermoanaerobacter brockii subsp. finnii Ako-1] Length = 135 Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 17/106 (16%), Positives = 31/106 (29%), Gaps = 8/106 (7%) Query: 36 PPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDS---QERSYLKEIATDYLYT 92 P I N + + + + V D + D + Sbjct: 32 KPKEITYYNYSPGGEFITNLKGD---RKFVKATIKLQVADKNTLKILEERTPQIRDLIIQ 88 Query: 93 LLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 +L G D + + L+ IK +N +G + I V +E Sbjct: 89 ILRGKTDQDVEGPEGQ--EKLKNDIKNQINKIIGERKIVNVYFEEF 132 >gi|255322747|ref|ZP_05363891.1| flagellar basal body-associated protein FliL [Campylobacter showae RM3277] gi|255300308|gb|EET79581.1| flagellar basal body-associated protein FliL [Campylobacter showae RM3277] Length = 177 Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 14/120 (11%), Positives = 32/120 (26%), Gaps = 6/120 (5%) Query: 23 FLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQE---R 79 + + + + + +S Y K+ ++ Sbjct: 59 VQAAAPKNTAGKRSNDYVNMGPVYPLDQFIVNLLSE-SGSRYLKTKVDLELSADTLTPEI 117 Query: 80 SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 K + D + + LS + K L+ +I + LN L I + + Sbjct: 118 DKKKPLIRDIVVSTLSSKTYEEVSTQKGKN--RLKDEIVDRLNEVLADGHIKNIYFTDFV 175 >gi|289548899|ref|YP_003473887.1| flagellar basal body-associated protein FliL [Thermocrinis albus DSM 14484] gi|289182516|gb|ADC89760.1| flagellar basal body-associated protein FliL [Thermocrinis albus DSM 14484] Length = 158 Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 51/139 (36%), Gaps = 6/139 (4%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 I +VT + +L + + +++ ++ ++++ A Sbjct: 19 LFLILAVILLVTAGAGVGAYLLLYSKDRRDKSLTPKDQVGVMMELGTFTL-NLADKDRDA 77 Query: 64 YFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 Y + ++ ++D + R ++ I D + ++S + ++LR ++ + Sbjct: 78 YIRISITVELSDEKVRQEVEKRLPIIKDAVIDVISSKTSSFVKTPEGR--ESLRLELIKR 135 Query: 121 LNSRLGSQFISEVLIDELN 139 LNS L I + E Sbjct: 136 LNSVLVEGGIRNIYFTEFV 154 >gi|325295418|ref|YP_004281932.1| flagellar basal body-associated protein FliL [Desulfurobacterium thermolithotrophum DSM 11699] gi|325065866|gb|ADY73873.1| flagellar basal body-associated protein FliL [Desulfurobacterium thermolithotrophum DSM 11699] Length = 168 Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 15/108 (13%), Positives = 39/108 (36%), Gaps = 6/108 (5%) Query: 34 HVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYL 90 K + + ++++ ++ Y V + + D + ++ + D + Sbjct: 59 EEIKATEKVGVMFDLGTFVV-NLADTDIERYLKVSIVLELKDQKIQAEAQKRLPEIKDAI 117 Query: 91 YTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 TLL + + F L+++I + +N+ L + V E Sbjct: 118 TTLLLTKKSSEIRTPEGIEF--LKEEIAKRVNAILPLGGVKNVYFTEF 163 >gi|115523558|ref|YP_780469.1| flagellar basal body-associated protein FliL [Rhodopseudomonas palustris BisA53] gi|115517505|gb|ABJ05489.1| flagellar basal body-associated protein FliL [Rhodopseudomonas palustris BisA53] Length = 164 Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 23/142 (16%), Positives = 46/142 (32%), Gaps = 6/142 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 LK + +V+ L+ + F+ + + + I ++I Sbjct: 23 LKLIIIAGAAAVLLLVGGGVWFVFFRAPAEHHEPVAVVVPKPVFIDVPDMTINLAGQPGE 82 Query: 62 Q-AYFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + Y VK V D + TD T L D + G L++++ Sbjct: 83 RIQYLRVKAVLEVKDDKMVEQIKPAMPRVTDTFQTYLRELRSSDIS--GSAGLFRLKEEM 140 Query: 118 KEDLNSRLGSQFISEVLIDELN 139 +N + ++ VL E+ Sbjct: 141 LRRVNLTVAPGQVTTVLFKEIV 162 >gi|77457772|ref|YP_347277.1| flagellar basal body-associated protein FliL [Pseudomonas fluorescens Pf0-1] gi|77381775|gb|ABA73288.1| flagellar basal body-associated protein FliL [Pseudomonas fluorescens Pf0-1] Length = 167 Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 15/145 (10%), Positives = 39/145 (26%), Gaps = 7/145 (4%) Query: 2 LKFLFSGIWISVVTLISF--YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59 + + G+ +++ T + + + P+ + + + + Sbjct: 21 IIVIVLGLLLAIGTSVGATWFFMHSAQSKPAATAEAAPVGKQPAIFEPMAPAFVANYNQN 80 Query: 60 VLQAYFLVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF--DNLR 114 Q Y V ++ + + + + L L SG Sbjct: 81 GRQRYMQVSITMLARNQADLEALKVHMPVIRNNLVMLFSGQDFATLATPVGQEMLRQKAT 140 Query: 115 KKIKEDLNSRLGSQFISEVLIDELN 139 ++E LG I ++L Sbjct: 141 ASVQEVAQKELGKVVIEQLLFTNFV 165 >gi|258592492|emb|CBE68801.1| putative Flagellar basal body-associated protein FliL [NC10 bacterium 'Dutch sediment'] Length = 183 Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 23/152 (15%), Positives = 57/152 (37%), Gaps = 17/152 (11%) Query: 3 KFLFSGIWISVVTL--ISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSE---------LV 51 K + + +V + + + + + M+ + A ++ K E Sbjct: 32 KLVAMAVQAGIVIALTGAAFGINIYVLKPMLVVNGKEQAKESEPEAKKEHHAGKILPLDP 91 Query: 52 SIPSVSNGVLQAYFLVKLSFIVNDSQERSYL----KEIATDYLYTLLSGPPMGDFVQIKA 107 +I +++ + Y V + + + +E K + +D L +LSG P+ + + Sbjct: 92 AIVNIAGTNGRRYLKVTVQIEIPEEEELVKEVEARKALLSDRLIQILSGKPLEEVTSAGS 151 Query: 108 FGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 L+++I + LG+ + V + E Sbjct: 152 --LQALKQQIADQFGKELGADRLQNVYLTEFV 181 >gi|149194580|ref|ZP_01871676.1| flagellar basal body-associated protein FliL [Caminibacter mediatlanticus TB-2] gi|149135324|gb|EDM23804.1| flagellar basal body-associated protein FliL [Caminibacter mediatlanticus TB-2] Length = 173 Score = 62.4 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 21/131 (16%), Positives = 45/131 (34%), Gaps = 12/131 (9%) Query: 19 FYMLFLRSMDT--MVENHVPPLAIKNTNIIKSELV-----SIPSVSNGVLQAYFLVKLSF 71 Y L + + E K TN+ + + + ++ N Y K+ Sbjct: 43 AYFLLSGNDEPQDNQEPQKIEKKKKVTNMTEIGPIYPLDTFVVNLINSNASRYLKCKIDL 102 Query: 72 IVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQ 128 ++ + + + D + +LS + + K + L+++IK +N L + Sbjct: 103 ELDAPETQQEIDKKLPAIRDLIIRILSSKTVEEIQTSKGK--EKLKEEIKRKINEILTTG 160 Query: 129 FISEVLIDELN 139 I V E Sbjct: 161 EIRNVYFTEFV 171 >gi|149203112|ref|ZP_01880083.1| possible flagellar synthesis protein [Roseovarius sp. TM1035] gi|149143658|gb|EDM31694.1| possible flagellar synthesis protein [Roseovarius sp. TM1035] Length = 167 Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 47/150 (31%), Gaps = 15/150 (10%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVS---------- 52 + L GI ++++ + + + + H S++ Sbjct: 18 RPLMIGIVLALLGAAAGFYTMWSGLIPLGGGHGSIAQGPAAGAAASDMPMGDLVFVPVVP 77 Query: 53 -IPSVSNGVLQAYFLVKLSFIVNDSQER--SYLKEIATDYLYTLLSGPPMGDFVQIKAFG 109 + SV G +++ V + + L D T L + D ++ Sbjct: 78 VVVSVGQGAARSHLRFAAELEVKAAHKSDVENLMPRIVDVTNTYLRALKLADIEDAQS-- 135 Query: 110 FDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 LR ++ + G I+++LI E Sbjct: 136 LIRLRAQLLRRMQVVTGEGRINDLLIMEFV 165 >gi|87119477|ref|ZP_01075374.1| flagellar protein [Marinomonas sp. MED121] gi|86164953|gb|EAQ66221.1| flagellar protein [Marinomonas sp. MED121] Length = 174 Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 15/153 (9%), Positives = 40/153 (26%), Gaps = 17/153 (11%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPP--------LAIKNTNIIKSELVSI 53 + + + + + + + + L + +K + + Sbjct: 22 IIIIVAAVLVLAIGGGAAFFLLSGDDSETADASASEEVSQEVSVATTGPAIYLKLDPAFV 81 Query: 54 PSVSNGVLQAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF 110 Q Y + L+ D + + L L S + + Sbjct: 82 VDFIVAGKQRYLQLNLTVKSRDQGQVDAIKIHMPLIRNSLVLLFSSQVFNELQSTEGK-- 139 Query: 111 DNLRKKIKEDLNSRL----GSQFISEVLIDELN 139 L+ E +N+ L G+ + ++L Sbjct: 140 MALKAAAVESINTILSEETGAGGVEDILFTNFV 172 >gi|225181600|ref|ZP_03735041.1| flagellar basal body-associated protein FliL [Dethiobacter alkaliphilus AHT 1] gi|225167708|gb|EEG76518.1| flagellar basal body-associated protein FliL [Dethiobacter alkaliphilus AHT 1] Length = 159 Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 45/141 (31%), Gaps = 6/141 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELV-SIPSVSNGV 60 L + + +IS Y L + + + + ++S+ Sbjct: 18 LLLAIVAVLALMGVVISVYALLADREEPLFGGGAQAEEEVAGPFRQFGPLDFTVNLSDSG 77 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + Y ++ + + L+E D + + + D + LR ++ Sbjct: 78 QRNYLKATITLAYEERRLAGELEERKAQIRDLIINTMRSKAVNDVSDGDGT--EKLRGEL 135 Query: 118 KEDLNSRLGSQFISEVLIDEL 138 E++NS L I E+ + Sbjct: 136 IEEVNSVLSGGEIVEIYFTDF 156 >gi|147678414|ref|YP_001212629.1| flagellar basal body-associated protein [Pelotomaculum thermopropionicum SI] gi|146274511|dbj|BAF60260.1| flagellar basal body-associated protein [Pelotomaculum thermopropionicum SI] Length = 176 Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 12/141 (8%), Positives = 45/141 (31%), Gaps = 11/141 (7%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + F+ + ++ V+ +++ ++ V + +++ Sbjct: 40 IFFIILAV-LAGVSAGAYFY---FKRPAGEAKEARKSGAVEMETVEMGEV-VANLAGSGG 94 Query: 62 QAYFLVKLSFIVNDSQERSYLKE----IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 Y V ++ ++ + + D L +L + D + +L++ + Sbjct: 95 AHYLRVNITLEYPRDKKLAEELKKKKHQILDSLIAVLRSKTLADVNSPGSVD--SLKRDL 152 Query: 118 KEDLNSRLGSQFISEVLIDEL 138 +N L ++ + + Sbjct: 153 LNGINVHLEEGQVTGIYFTDY 173 >gi|89069815|ref|ZP_01157150.1| hypothetical protein OG2516_10024 [Oceanicola granulosus HTCC2516] gi|89044616|gb|EAR50732.1| hypothetical protein OG2516_10024 [Oceanicola granulosus HTCC2516] Length = 177 Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 20/121 (16%), Positives = 40/121 (33%), Gaps = 7/121 (5%) Query: 25 RSMDTMVENHVPPLAIKNTNIIKSE-LVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY-- 81 + E + ++ + + +P V G + A ++ LS V Sbjct: 51 ADVAAAPEEEPGDVVVEGRDYARLNNQFVVPVVEEGSVAALVVLSLSLEVAAGSRDVVFA 110 Query: 82 LKEIATDYLYTLLSGPPMG---DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + D L +L G D A LR +++ +G + +VLI ++ Sbjct: 111 HEPKLRDALLQVLFGHANIGGFDGNFTSAANMRVLRSSLRDAARETMGDH-VLDVLIIDI 169 Query: 139 N 139 Sbjct: 170 V 170 >gi|238927454|ref|ZP_04659214.1| flagellar basal body-associated protein FliL [Selenomonas flueggei ATCC 43531] gi|238884736|gb|EEQ48374.1| flagellar basal body-associated protein FliL [Selenomonas flueggei ATCC 43531] Length = 173 Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 23/136 (16%), Positives = 40/136 (29%), Gaps = 16/136 (11%) Query: 16 LISFYMLFLRSMDTMVENHV--PPLAIKNTNIIKSELV---SIPSVSNGVLQAYFLVKLS 70 Y + ++ K + +V G + + Sbjct: 38 GGISYYIISQAESPSHAEDGGGSKSNHDPGVFYKLGDPKEGILVNVGGGRAGKFLKAGVV 97 Query: 71 FIVN--------DSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN 122 +N D + + D L P+ +F K D L+K++K+ LN Sbjct: 98 VELNPGKSEVVKDGKVNPVAETKILDTTMQFLRAAPLEEFDAAKQ---DALKKQLKDALN 154 Query: 123 SRLGSQFISEVLIDEL 138 RLG + EV I Sbjct: 155 DRLGQGSVYEVYITSF 170 >gi|57505268|ref|ZP_00371197.1| probable flagellar protein Cj1408 [Campylobacter upsaliensis RM3195] gi|57016404|gb|EAL53189.1| probable flagellar protein Cj1408 [Campylobacter upsaliensis RM3195] Length = 178 Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 14/121 (11%), Positives = 34/121 (28%), Gaps = 12/121 (9%) Query: 28 DTMVENHVPPLAIKNTNII------KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY 81 + ++ + ++ +S+ Y + N ++ Sbjct: 59 AKPAAKTSQASTQRGSDYANIGPMYPLDPFTLNLLSD-SGSRYVKCTIELEQNSELLKTE 117 Query: 82 LK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 L I D + L+ + K + L+ ++ +N L FI V + Sbjct: 118 LDKKVAIIRDVIIRTLTAKTFEEISTSKGK--ERLKDELVGKINEILTDGFIKNVYFTDF 175 Query: 139 N 139 Sbjct: 176 V 176 >gi|148256790|ref|YP_001241375.1| flagellar basal body-associated protein FliL [Bradyrhizobium sp. BTAi1] gi|146408963|gb|ABQ37469.1| Flagellar basal body-associated protein FliL [Bradyrhizobium sp. BTAi1] Length = 164 Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 23/140 (16%), Positives = 47/140 (33%), Gaps = 7/140 (5%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ- 62 + G+ + + Y F + A K ++ + + V N + Sbjct: 26 IMIVGVLALLGIGGAAYFFFFSHKNDEHHAEAA-PAPKPPAFVEVPDLLVNLVGNPGDRV 84 Query: 63 AYFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 Y VK+ V + ++ TD T L D + G L++++ + Sbjct: 85 QYLKVKIVLEVKEEKQVEHIKPTLPRVTDIFQTYLRELRPSDLN--GSAGLFRLKEELTK 142 Query: 120 DLNSRLGSQFISEVLIDELN 139 +N L ++ VL E+ Sbjct: 143 RVNVALAPNQVNAVLFKEIV 162 >gi|117919796|ref|YP_868988.1| flagellar basal body-associated protein FliL [Shewanella sp. ANA-3] gi|117612128|gb|ABK47582.1| flagellar basal body-associated protein FliL [Shewanella sp. ANA-3] Length = 174 Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 19/152 (12%), Positives = 47/152 (30%), Gaps = 18/152 (11%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN---------IIKSELVSIP 54 F+ +G+ +++ + + S + + ++T + + Sbjct: 23 FIGAGVLAALLIGGALWFFLGSSDEAPAASAEGTAPTESTTPAADAAMAAYVPMPRPFLF 82 Query: 55 SVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFD 111 ++ +K+ +V +D + D L T SG + Sbjct: 83 NLPGPDRARLVEIKVQLMVRGQDDDVLTQKHIPLIEDALLTTFSGADVQKLSTQAGKD-- 140 Query: 112 NLRK----KIKEDLNSRLGSQFISEVLIDELN 139 LR+ ++ L S G + + +VL Sbjct: 141 ELRQLALLSVQNTLQSVTGRKVVEKVLFTGFV 172 >gi|21242692|ref|NP_642274.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306] gi|21108165|gb|AAM36810.1| flagellar protein [Xanthomonas axonopodis pv. citri str. 306] Length = 175 Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 46/147 (31%), Gaps = 9/147 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK---NTNIIKSELVSIPSVSN 58 + + G+ + + + H P + + + ++++ Sbjct: 27 ILLIAIGVVVLAAAGGGAWFFLGHKGEEKGGKHDAPKVAEVPKPAQYFPMDPAIVVNLAD 86 Query: 59 -GVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQI--KAFGFDN 112 G Y V++ + D +E + +L LLS D + K + Sbjct: 87 PGDGPQYLQVEVQLVTRDPEELKLITENAPAIRAHLLMLLSQVKATDVADLAGKQKLQKS 146 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELN 139 + ++ + S G + + E+L Sbjct: 147 ALAEAQKVMTSETGKKCVEELLFTSFV 173 >gi|21231368|ref|NP_637285.1| flagellar biosynthesis protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66768579|ref|YP_243341.1| flagellar biosynthesis protein [Xanthomonas campestris pv. campestris str. 8004] gi|188991611|ref|YP_001903621.1| Flagellar fliL protein. [Xanthomonas campestris pv. campestris str. B100] gi|21113031|gb|AAM41209.1| flagellar biosynthesis protein [Xanthomonas campestris pv. campestris str. ATCC 33913] gi|66573911|gb|AAY49321.1| flagellar biosynthesis protein [Xanthomonas campestris pv. campestris str. 8004] gi|167733371|emb|CAP51572.1| Flagellar fliL protein [Xanthomonas campestris pv. campestris] Length = 172 Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 46/147 (31%), Gaps = 9/147 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK---NTNIIKSELVSIPSVSN 58 + + G+ + + + H P + + + ++++ Sbjct: 24 ILLIAIGVVVLAAAGGGAWFFLGHKGEEKDGKHAAPKVAEVPKPAQYFPMDPAIVVNLAD 83 Query: 59 -GVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQI--KAFGFDN 112 G Y V++ + D +E + +L LLS D + K + Sbjct: 84 PGDGPQYLQVEVQLVTRDPEELKLITENAPAIRAHLLMLLSQVKAADVADLPGKQKLQKS 143 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELN 139 + ++ + S G + + E+L Sbjct: 144 ALAEAQKVMTSETGKKCVEELLFTSFV 170 >gi|330819959|ref|YP_004348821.1| Flagellar protein FliL [Burkholderia gladioli BSR3] gi|327371954|gb|AEA63309.1| Flagellar protein FliL [Burkholderia gladioli BSR3] Length = 165 Score = 62.0 bits (149), Expect = 4e-08, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 39/126 (30%), Gaps = 6/126 (4%) Query: 19 FYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQE 78 + F+R P + + +++ S+ + Y + L+ + D Sbjct: 39 AWFAFVRHEGMAEAAQAGPPPLSTPVYFPLDPMTVNLQSDDEMH-YVRIGLTLKLTDPTA 97 Query: 79 RSY---LKEIATDYLYTLLSGPPMGDFVQIK--AFGFDNLRKKIKEDLNSRLGSQFISEV 133 + Y + LS D ++ D LR I+ S + EV Sbjct: 98 QDYLTQHMPEIRSRILMALSNKHPEDLATLEDKRQLVDQLRALIERPTQPGNRSARVDEV 157 Query: 134 LIDELN 139 LI + Sbjct: 158 LITDFV 163 >gi|118581836|ref|YP_903086.1| flagellar basal body-associated protein FliL [Pelobacter propionicus DSM 2379] gi|118504546|gb|ABL01029.1| flagellar basal body-associated protein FliL [Pelobacter propionicus DSM 2379] Length = 177 Score = 61.6 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/160 (13%), Positives = 47/160 (29%), Gaps = 26/160 (16%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKN------------------- 42 + + +VV L + + + + + Sbjct: 20 MFIIIGAAVAAVVILGVVAFMLMGKGGSDEKGKEGEAKTEAKAEGGHGGETTAGKEGAAA 79 Query: 43 TNIIKSELVSIPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPM 99 NI E + ++ +G Y VK+ + + L D + LLS + Sbjct: 80 ANIYPLEPFIV-NIYDGQELRYLKVKVEMEMAGSTKGDLDARLAP-MRDTILVLLSSKTL 137 Query: 100 GDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 D ++ L+ +I +N + I++V + Sbjct: 138 QDLQDLQGKN--QLKDEILVSVNKIITPARITKVYFTDFV 175 >gi|325928695|ref|ZP_08189867.1| flagellar basal body-associated protein [Xanthomonas perforans 91-118] gi|325540927|gb|EGD12497.1| flagellar basal body-associated protein [Xanthomonas perforans 91-118] Length = 183 Score = 61.6 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 18/147 (12%), Positives = 46/147 (31%), Gaps = 9/147 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK---NTNIIKSELVSIPSVSN 58 + + G+ + + + H P + + + ++++ Sbjct: 35 ILLIAIGVVVLAAAGGGAWFFLGHKGEEKGGKHDAPKVAEVPKPAQYFPMDPAIVVNLAD 94 Query: 59 -GVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQI--KAFGFDN 112 G Y V++ + D +E + +L LLS D + K + Sbjct: 95 PGDGPQYLQVEVQLVTRDPEELKLITENAPAIRAHLLMLLSQVKATDVADLAGKQKLQKS 154 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELN 139 + ++ + S G + + E+L Sbjct: 155 ALAEAQKVMTSETGKKCVEELLFTSFV 181 >gi|242281269|ref|YP_002993398.1| flagellar basal body-associated protein FliL [Desulfovibrio salexigens DSM 2638] gi|242124163|gb|ACS81859.1| flagellar basal body-associated protein FliL [Desulfovibrio salexigens DSM 2638] Length = 166 Score = 61.6 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 58/151 (38%), Gaps = 16/151 (10%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLA-----IKNTNIIKSELVSIP- 54 MLK++ + ++++ F+ + P ++ + + ++ Sbjct: 14 MLKWIILILLLAILGGGGFFAYKKFFAAQPEDAVEEPKDNQAAEGEDPGTLPGDGFTVTL 73 Query: 55 -----SVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIK 106 ++++ + + Y + + V + + L + + D L LLS D ++ Sbjct: 74 PTFVVNLADPLGRRYLKLGVDVEVISEEAVAELSKKEPMVKDTLILLLSSKTYQDLSTME 133 Query: 107 AFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 + L+K+I + LN LG + +V + Sbjct: 134 SKIL--LKKEIVDRLNQILGGSKVLQVYFTD 162 >gi|288957844|ref|YP_003448185.1| hypothetical protein AZL_010030 [Azospirillum sp. B510] gi|288910152|dbj|BAI71641.1| hypothetical protein AZL_010030 [Azospirillum sp. B510] Length = 139 Score = 61.6 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 21/98 (21%), Positives = 42/98 (42%), Gaps = 4/98 (4%) Query: 43 TNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER---SYLKEIATDYLYTLLS-GPP 98 ++ + + +P V+ G ++ Y V+++ V DS + D + T + G Sbjct: 33 PPSVRIKPLMVPVVNAGRIEKYTQVEVNLEVGDSLKLGEVQLSIPRLQDAILTAIYKGVD 92 Query: 99 MGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLID 136 G V+ LR++I E + + G I+ +LI Sbjct: 93 EGWIVRGNIANVPALRRRIDESVIAMFGKDVITRILIT 130 >gi|291277313|ref|YP_003517085.1| flagellar protein [Helicobacter mustelae 12198] gi|290964507|emb|CBG40359.1| possible flagellar protein [Helicobacter mustelae 12198] Length = 168 Score = 61.6 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 20/155 (12%), Positives = 57/155 (36%), Gaps = 20/155 (12%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK--------------NTNIIK 47 L F+ G+ + ++ +I+ ++ L + P A K Sbjct: 15 LLFVILGVVVFLIIVIALVVMLLMGGEKQEAKQEVPAASKTQAPGTKDTSLLSIGPLYSM 74 Query: 48 SELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQ 104 + + V+ + Y ++F +++ + + +++ D + +LS + + V Sbjct: 75 PKPFIVNLVTQ-SGRRYLKTSITFELSNPKLQQEVEQKTSILQDIIIDVLSSKSIEEIVT 133 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 K + ++ +I + +N L ++ + E Sbjct: 134 TKGK--ERIKDEILQRVNQILVDGYMKNIFFTEFV 166 >gi|315639231|ref|ZP_07894393.1| flagellar protein FliL [Campylobacter upsaliensis JV21] gi|315480557|gb|EFU71199.1| flagellar protein FliL [Campylobacter upsaliensis JV21] Length = 178 Score = 61.6 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 15/117 (12%), Positives = 34/117 (29%), Gaps = 6/117 (5%) Query: 26 SMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK-- 83 + + + E ++ +S+ Y + N ++ L Sbjct: 63 AKSSQAPTQRGSDYANIGPMYPLEPFTLNLLSD-SGSRYVKCTIELEQNSELLKTELDKK 121 Query: 84 -EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 I D + L+ + K + L+ ++ +N L FI V + Sbjct: 122 VAIIRDVIIRTLTAKTFEEISTSKGK--ERLKDELVGKINEILTDGFIKNVYFTDFV 176 >gi|153001446|ref|YP_001367127.1| flagellar basal body-associated protein FliL [Shewanella baltica OS185] gi|151366064|gb|ABS09064.1| flagellar basal body-associated protein FliL [Shewanella baltica OS185] Length = 175 Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 19/152 (12%), Positives = 47/152 (30%), Gaps = 18/152 (11%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNT---------NIIKSELVSIP 54 F+ G+ ++++ + + S + V + + + + + Sbjct: 24 FIGVGVLVALLIAGALWFFLGSSSEDAVTPTDGAVQTETPTESGALTTASYVPMPRPFLF 83 Query: 55 SVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFD 111 ++ +K+ +V +D + D L T SG + Sbjct: 84 NLPGPDRARLVEIKVQLMVRGTDDDVLTQKHIPLIEDALLTTFSGADVQKLSTQAGKD-- 141 Query: 112 NLRK----KIKEDLNSRLGSQFISEVLIDELN 139 LR+ ++ L S G + + +VL Sbjct: 142 ELRQLALLSVQNTLQSVTGRKVVEKVLFTGFV 173 >gi|162210776|ref|YP_562339.2| flagellar basal body-associated protein FliL [Shewanella denitrificans OS217] Length = 173 Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 21/149 (14%), Positives = 43/149 (28%), Gaps = 18/149 (12%) Query: 7 SGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK---------NTNIIKSELVSIPSVS 57 G+ + +V + L S + + P + N I + ++ Sbjct: 25 IGLVLVLVIGAGLWFLMGSSDAPVADPDSDPSSAAAPAVKAPVAEANYISMPRPFLFNLP 84 Query: 58 NGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 +K+ +V +D + D L T SG + LR Sbjct: 85 GADRPRIVEIKVQLMVRGSDDGTLTQKHIPLIEDALLTTFSGADVQKLSTQAGKD--ELR 142 Query: 115 K----KIKEDLNSRLGSQFISEVLIDELN 139 + ++ L +G + +VL Sbjct: 143 QLALLNVQNTLQPVIGRTVVEKVLFTGFV 171 >gi|146341902|ref|YP_001206950.1| flagellar basal body-associated protein FliL [Bradyrhizobium sp. ORS278] gi|146194708|emb|CAL78733.1| Flagellar basal body-associated protein FliL [Bradyrhizobium sp. ORS278] Length = 164 Score = 61.6 bits (148), Expect = 5e-08, Method: Composition-based stats. Identities = 24/144 (16%), Positives = 45/144 (31%), Gaps = 9/144 (6%) Query: 2 LKFLF--SGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59 LK + G + + Y F P ++ + + V N Sbjct: 22 LKLIIMVVGALALLGIGGAAYFFFFSHKADEHHAEAAPAPKP-PAFVEVPDLLVNLVGNP 80 Query: 60 VLQ-AYFLVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 + Y VK+ V + + TD T L D + G L++ Sbjct: 81 GDRVQYLKVKIVLEVKEEKQIEHIKPTLPRVTDIFQTYLRELRPSDLN--GSAGLFRLKE 138 Query: 116 KIKEDLNSRLGSQFISEVLIDELN 139 ++ + +N L ++ VL E+ Sbjct: 139 ELTKRVNVALAPNQVNAVLFKEIV 162 >gi|253682344|ref|ZP_04863141.1| flagellar basal body-associated protein FliL [Clostridium botulinum D str. 1873] gi|253562056|gb|EES91508.1| flagellar basal body-associated protein FliL [Clostridium botulinum D str. 1873] Length = 163 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 55/148 (37%), Gaps = 13/148 (8%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIK----SELVSIPSVS 57 LK + + +++ + +L + T ++ V L++ + + + + S Sbjct: 15 LKIMIIVLLAAILLGGGIFTGYLVASKTKPQSVVTNLSLIQNTLKQRTFALDEFLVNLKS 74 Query: 58 NGVLQAYFLVKLSFIVNDSQERSYLKEIA-------TDYLYTLLSGPPMGDFVQIKAFGF 110 + Y K+S D +E L++ D + ++L DF Sbjct: 75 DDASNRYIKTKVSLGYADIKENKTLEDELNTKKTIARDAINSILRTKKKEDFA--TNAQV 132 Query: 111 DNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + ++++IK +N L I V E+ Sbjct: 133 EKIKEEIKNKINPLLQDGQIINVYFSEI 160 >gi|152990378|ref|YP_001356100.1| flagellar basal body-associated protein FliL [Nitratiruptor sp. SB155-2] gi|151422239|dbj|BAF69743.1| flagellar basal body-associated protein FliL [Nitratiruptor sp. SB155-2] Length = 171 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 16/91 (17%), Positives = 35/91 (38%), Gaps = 5/91 (5%) Query: 52 SIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAF 108 I ++ + Y V + V D + + L+ D + TLL + + Sbjct: 79 FIVNLQDKDADRYLKVTIVLDVQDEKVKQELEKRLPQVKDAITTLLFTKSSYELRTAE-- 136 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 G + L+++I + +N+ L + V + Sbjct: 137 GIEELKEQILKRVNAILPIGGVKNVYFTDFV 167 >gi|260574388|ref|ZP_05842392.1| flagellar basal body-associated protein FliL [Rhodobacter sp. SW2] gi|259023284|gb|EEW26576.1| flagellar basal body-associated protein FliL [Rhodobacter sp. SW2] Length = 161 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 37/120 (30%), Gaps = 5/120 (4%) Query: 22 LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERS- 80 LF + + + + A+ + + E V I + A+ + V E Sbjct: 43 LFGAAHEEVAADAHAASALPDIAFVPIEPVVIS-LGAAAQNAHLRMTAQLEVAKPYEAEV 101 Query: 81 -YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 L D L L + A LR ++ + G + ++LI E Sbjct: 102 VLLMPRVLDVLNGYLRAVEVAQLEDPAA--LVRLRAQMLRRIQIVTGDGRVRDLLITEFV 159 >gi|315453005|ref|YP_004073275.1| putative flagellar protein FliL [Helicobacter felis ATCC 49179] gi|315132057|emb|CBY82685.1| possible flagellar protein FliL [Helicobacter felis ATCC 49179] Length = 182 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 21/169 (12%), Positives = 56/169 (33%), Gaps = 32/169 (18%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK------------------- 41 ML + + + ++ + LF+ N Sbjct: 14 MLFVVMGAVLVMLILVGVIVFLFMSKNAEPNGNAPKSGGAAAQQMRNAQMNNNTDEGSLM 73 Query: 42 --NTNIIKSELV------SIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYL 90 +++ + + + ++ + + Y +S +ND++ +K D + Sbjct: 74 VRSSDYLSLGPLYPLTGAFVVNLISQNGRRYLKASVSLELNDAKLLEEVKVKETAIKDTI 133 Query: 91 YTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 +LS + + +K L+++I+ ++NS L F+ V + Sbjct: 134 IEILSSKSVEEITTLKGKN--RLKEEIRSNINSFLIDGFVKNVFFTDFV 180 >gi|209884528|ref|YP_002288385.1| flagellar basal body-associated protein FliL [Oligotropha carboxidovorans OM5] gi|209872724|gb|ACI92520.1| flagellar basal body-associated protein FliL [Oligotropha carboxidovorans OM5] Length = 167 Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 50/140 (35%), Gaps = 6/140 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + + + ++++ + +FLRS D + + + + SN Sbjct: 26 IFMIAGAVVLALMVGALGWFVFLRSHDETQHADAAAAKVVPPVFLDVPDILVNLASNPGE 85 Query: 62 Q-AYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + Y VK + ++ + TD T L D + G +++++ Sbjct: 86 RIQYLKVKAVLELKEAPLVDKVKPSMPRVTDLFQTYLRELRANDLN--GSVGLFRMKEEL 143 Query: 118 KEDLNSRLGSQFISEVLIDE 137 + +N + + ++ VL E Sbjct: 144 TKRVNVAIAPERVNAVLFKE 163 >gi|313673295|ref|YP_004051406.1| flagellar basal body-associated protein flil [Calditerrivibrio nitroreducens DSM 19672] gi|312940051|gb|ADR19243.1| flagellar basal body-associated protein FliL [Calditerrivibrio nitroreducens DSM 19672] Length = 178 Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 40/90 (44%), Gaps = 5/90 (5%) Query: 52 SIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAF 108 I ++++ +Q Y V+++ +++ + + + D + ++LS + D + Sbjct: 88 IIVNLADQGVQRYLKVQIAVELDNPKLEEEVKKREPQIKDIIISVLSSKTVSDVNTPQGK 147 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 L+++I + N L I+++ E Sbjct: 148 --IALKQEILKRANMVLTEGEITDLFFSEF 175 >gi|255091310|ref|ZP_05320788.1| flagellar basal body-associated protein [Clostridium difficile CIP 107932] Length = 136 Score = 61.2 bits (147), Expect = 6e-08, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 46/147 (31%), Gaps = 21/147 (14%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVE-------NHVPPLAIKNTNIIKSELVSI 53 M+ +F + + + + + ++ T + E + + Sbjct: 1 MILIIF--------SAGAGFFILGEGGNKQIDKIAGLFIPTGKGKDEVKTENLDLEEMVL 52 Query: 54 PSVSNGVLQAYFLVKLSFIVNDSQER-SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDN 112 GV Y V ++ + S + + D + DF A N Sbjct: 53 KLADEGV--RYLKVSITVSYDSSYKDIEKNTPLIRDNIINCFMAKRADDF---TADNLKN 107 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELN 139 ++++IK LN +LG I + + Sbjct: 108 IKEEIKNTLNIQLGENVIQNIYFTNIV 134 >gi|253827891|ref|ZP_04870776.1| flagellar basal body-associated protein [Helicobacter canadensis MIT 98-5491] gi|253511297|gb|EES89956.1| flagellar basal body-associated protein [Helicobacter canadensis MIT 98-5491] Length = 177 Score = 60.8 bits (146), Expect = 6e-08, Method: Composition-based stats. Identities = 18/120 (15%), Positives = 39/120 (32%), Gaps = 5/120 (4%) Query: 23 FLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL 82 S + + + + + VS G + Y ++ ++ ++ + L Sbjct: 58 TQSSASKSSVANPNSSLLNVGPMYPLDQFIVNLVSTGGGKRYLKTAIALEMSIAEMQPEL 117 Query: 83 KEIA---TDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 D + T+L+ + + L+++I LN L IS V E Sbjct: 118 DTKVNILRDTIITILASKTFEEIQTTRGK--QKLKEEIIARLNEFLVDGRISNVFFTEFV 175 >gi|255305284|ref|ZP_05349456.1| flagellar basal body-associated protein [Clostridium difficile ATCC 43255] Length = 147 Score = 60.8 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 42/133 (31%), Gaps = 13/133 (9%) Query: 15 TLISFYMLFLRSMDTMVE-------NHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLV 67 + + + + + ++ T + E + + GV Y V Sbjct: 18 SAGAGFFILGEGGNKQIDKIAGLFIPTGKGKDEVKTENLDLEEMVLKLADEGV--RYLKV 75 Query: 68 KLSFIVNDSQER-SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLG 126 ++ + S + + D + DF A N++++IK LN +LG Sbjct: 76 SITVSYDSSYKDIEKNTPLIRDNIINCFMAKRADDF---TAENLKNIKEEIKNTLNIQLG 132 Query: 127 SQFISEVLIDELN 139 I + + Sbjct: 133 ENVIQNIYFTNIV 145 >gi|126175122|ref|YP_001051271.1| flagellar basal body-associated protein FliL [Shewanella baltica OS155] gi|125998327|gb|ABN62402.1| flagellar basal body-associated protein FliL [Shewanella baltica OS155] Length = 175 Score = 60.8 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 43/149 (28%), Gaps = 18/149 (12%) Query: 7 SGIWISVVTLISFYMLFLRSMDTMV---------ENHVPPLAIKNTNIIKSELVSIPSVS 57 G+ ++++ + S + + + + + + ++ Sbjct: 27 VGVLVALLIGGGVWFFMGSSSEEVPVAAADGTVQAEAPATGDLATASYVPMPRPFLFNLP 86 Query: 58 NGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 +K+ +V +D + D L T SG + LR Sbjct: 87 GPDRARLVEIKVQLMVRGTDDDVLTQKHIPLIEDALLTTFSGADVQKLSTQAGKD--ELR 144 Query: 115 K----KIKEDLNSRLGSQFISEVLIDELN 139 + ++ L S G + + +VL Sbjct: 145 QLALLSVQNTLQSVTGRKVVEKVLFTGFV 173 >gi|268679514|ref|YP_003303945.1| flagellar basal body-associated protein FliL [Sulfurospirillum deleyianum DSM 6946] gi|268617545|gb|ACZ11910.1| flagellar basal body-associated protein FliL [Sulfurospirillum deleyianum DSM 6946] Length = 179 Score = 60.8 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 11/110 (10%), Positives = 34/110 (30%), Gaps = 6/110 (5%) Query: 33 NHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDY 89 + + + +S + V + ++D++ + + + D Sbjct: 71 PKRSTDHLVVGPMYPLAQFVVNLLSE-SGNRFLKVAIDLELSDAKLQPEIDHKKSLIRDI 129 Query: 90 LYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + S + IK L+ ++ E +N L ++ + + Sbjct: 130 IIRTFSSKTFEEISTIKGKD--KLKDEVLEKINENLSDGYVKNIYFTDFV 177 >gi|153952291|ref|YP_001398709.1| flagellar basal body-associated protein FliL [Campylobacter jejuni subsp. doylei 269.97] gi|152939737|gb|ABS44478.1| flagellar protein FliL [Campylobacter jejuni subsp. doylei 269.97] Length = 178 Score = 60.8 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 14/121 (11%), Positives = 34/121 (28%), Gaps = 7/121 (5%) Query: 23 FLRSMDTMVENHVPPLAIKNT-NIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY 81 + N + + ++ +S+ Y + N+ + Sbjct: 59 VKADKPKVSAPAQRGSDFANIGPMYPLDPFTLNLLSD-SGSRYVKCTIELEQNNELLKPE 117 Query: 82 LK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 L + D + L+ + K + L+ ++ +N L FI V + Sbjct: 118 LDKKVPVIRDIIIRTLTAKTFEEVSTQKGK--ERLKDELVGKINEILTDGFIKNVYFTDF 175 Query: 139 N 139 Sbjct: 176 V 176 >gi|154174846|ref|YP_001408107.1| flagellar basal body-associated protein FliL [Campylobacter curvus 525.92] gi|153793137|gb|EAT99397.2| flagellar basal body-associated protein FliL [Campylobacter curvus 525.92] Length = 179 Score = 60.8 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 16/119 (13%), Positives = 35/119 (29%), Gaps = 10/119 (8%) Query: 29 TMVENHVPPLAIKNTNIIKSELV-----SIPSVSNGVLQAYFLVKLSFIVNDSQE---RS 80 + P + +N + + I ++ + + K+ +D Sbjct: 61 SAPAKSAKPASKRNNDYANMGPIYPLDQFIVNLLSENGSRFLKTKIDLEQSDELLTPELD 120 Query: 81 YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 K + D + LS + K L+ +I LN L +I + + Sbjct: 121 KKKALLRDIIIRTLSSKTYEEVSTAKGKD--RLKDEIVGKLNEVLSDGYIKNIYFTDFV 177 >gi|217972622|ref|YP_002357373.1| flagellar basal body-associated protein FliL [Shewanella baltica OS223] gi|217497757|gb|ACK45950.1| flagellar basal body-associated protein FliL [Shewanella baltica OS223] Length = 174 Score = 60.8 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 47/151 (31%), Gaps = 17/151 (11%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVEN--------HVPPLAIKNTNIIKSELVSIPS 55 F+ G++++++ + + S D A+ + + + + Sbjct: 24 FIGVGVFVALLIAGALWFFLGSSEDAATPTDGAVQTITPAESGALTTASYVPMPRPFLFN 83 Query: 56 VSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDN 112 + +K+ +V +D + D L T SG + Sbjct: 84 LPGPDRARLVEIKVQLMVRGTDDDVLTQKHIPLIEDALLTTFSGADVQKLSTQAGKD--E 141 Query: 113 LRK----KIKEDLNSRLGSQFISEVLIDELN 139 LR+ ++ L S G + + +VL Sbjct: 142 LRQLALLSVQNTLQSVTGRKVVEKVLFTGFV 172 >gi|288957853|ref|YP_003448194.1| hypothetical protein AZL_010120 [Azospirillum sp. B510] gi|288910161|dbj|BAI71650.1| hypothetical protein AZL_010120 [Azospirillum sp. B510] Length = 163 Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 16/124 (12%), Positives = 40/124 (32%), Gaps = 5/124 (4%) Query: 18 SFYMLFL--RSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFI--V 73 + ++ + T V P T ++ + +P + ++ + V ++ + Sbjct: 33 GGWFVYQKYFANQTDQPKKVEPPPKPPTAFVRLPPLVVPMIGPSRVEQFVTVVVAVEVIL 92 Query: 74 NDSQERSYLKEIATDYLYTLLSG-PPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISE 132 + TD T L G + ++ K+ E +G + + Sbjct: 93 EKQPIVQANQPRLTDAFLTALYGGVADQSILGGGLINIPAVKAKLLEAAVKTVGKDAVYD 152 Query: 133 VLID 136 VL+ Sbjct: 153 VLVQ 156 >gi|323700138|ref|ZP_08112050.1| flagellar basal body-associated protein FliL [Desulfovibrio sp. ND132] gi|323460070|gb|EGB15935.1| flagellar basal body-associated protein FliL [Desulfovibrio desulfuricans ND132] Length = 167 Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 48/144 (33%), Gaps = 14/144 (9%) Query: 6 FSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELV---------SIPSV 56 + + + + + E+ +E + + ++ Sbjct: 22 IILVVLLAALGVGGWFGYKMFFAAPAEDTAAQTDAAGDPGKPAEQLEGQIVALPTFLVNL 81 Query: 57 SNGVLQAYFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113 ++ + + Y + + V D+ ++ + D L LLS ++ L Sbjct: 82 ADPLGRRYLKLGVEVEVRDADAQAALTKYEAKVKDTLLLLLSSKTYEGLSTMQ--DKVEL 139 Query: 114 RKKIKEDLNSRLGSQFISEVLIDE 137 +++I + LN +G+ + V I E Sbjct: 140 KQEIADRLNQIIGNGGVLRVYITE 163 >gi|254506852|ref|ZP_05118991.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus 16] gi|219550137|gb|EED27123.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus 16] Length = 165 Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 16/128 (12%), Positives = 35/128 (27%), Gaps = 8/128 (6%) Query: 20 YMLFLRSMDTMVENHVPPLAI---KNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV--- 73 + L + E V + + + I +V+ +K+ +V Sbjct: 36 FFLMGSDDEAAAEESVEQEVVVSTEPVAYVNIAQPFIFNVTGDKRDRLVQIKVQLMVRGS 95 Query: 74 NDSQERSYLKEIATDYLYTLLSGPPMGDFVQI-KAFGF-DNLRKKIKEDLNSRLGSQFIS 131 + Y + L + + + + + IK L +G I Sbjct: 96 ENENLARYHSPLVESSLLSTFASATVEQLRSANGRVELREKATEDIKASLTRAVGQPVIE 155 Query: 132 EVLIDELN 139 VL + Sbjct: 156 RVLFTDFV 163 >gi|160876171|ref|YP_001555487.1| flagellar basal body-associated protein FliL [Shewanella baltica OS195] gi|160861693|gb|ABX50227.1| flagellar basal body-associated protein FliL [Shewanella baltica OS195] gi|315268367|gb|ADT95220.1| flagellar basal body-associated protein FliL [Shewanella baltica OS678] Length = 174 Score = 60.8 bits (146), Expect = 8e-08, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 46/151 (30%), Gaps = 17/151 (11%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVEN--------HVPPLAIKNTNIIKSELVSIPS 55 F+ G+ ++++ + + S D A+ + + + + Sbjct: 24 FIGVGVLVALLIAGALWFFLGSSEDAATPTDGAVQTITPAESGALTTASYVPMPRPFLFN 83 Query: 56 VSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDN 112 + +K+ +V +D + D L T SG + Sbjct: 84 LPGPDRARLVEIKVQLMVRGTDDDVLTQKHIPLIEDALLTTFSGADVQKLSTQAGKD--E 141 Query: 113 LRK----KIKEDLNSRLGSQFISEVLIDELN 139 LR+ ++ L S G + + +VL Sbjct: 142 LRQLALLSVQNTLQSVTGRKVVEKVLFTGFV 172 >gi|307546955|ref|YP_003899434.1| flagellar basal body-associated protein FliL [Halomonas elongata DSM 2581] gi|307218979|emb|CBV44249.1| flagellar basal body-associated protein FliL [Halomonas elongata DSM 2581] Length = 159 Score = 60.5 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 44/140 (31%), Gaps = 19/140 (13%) Query: 12 SVVTLISFYMLFLR--SMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKL 69 VT + +MLF + M+ + + ++ ++ + + Sbjct: 23 LAVTASALFMLFTQQGGMEQAQAEEHANVEYREPIFVEINPFTVNLAEDDHGARLLYAGI 82 Query: 70 SFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLG 126 S V D + L TLLSG D +K++ +++ + L Sbjct: 83 SLKVTDTQSRELLEAHMPQVRSRLLTLLSGRQAADLTSADG------KKRLADEIIATLE 136 Query: 127 SQF--------ISEVLIDEL 138 + I +VL E Sbjct: 137 APMEKTQPELAIEDVLFTEF 156 >gi|83593154|ref|YP_426906.1| hypothetical protein Rru_A1819 [Rhodospirillum rubrum ATCC 11170] gi|83576068|gb|ABC22619.1| hypothetical protein Rru_A1819 [Rhodospirillum rubrum ATCC 11170] Length = 161 Score = 60.5 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 17/121 (14%), Positives = 34/121 (28%), Gaps = 2/121 (1%) Query: 18 SFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQ 77 + + E V + + + IP + G L+ V+L V+ Sbjct: 36 GLFPAPPTAEAPAREPTVIERLGPPPVFLPMKPIEIPFIVKGELRRRVSVRLRLQVDPES 95 Query: 78 --ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLI 135 + + L L+ ++ E + LG + +VLI Sbjct: 96 IPVIEKAGDRLHAEYFKALMDFIPTTLESRDTVDLRALKARMLEVSSRVLGPHVVLDVLI 155 Query: 136 D 136 Sbjct: 156 Q 156 >gi|219854403|ref|YP_002471525.1| hypothetical protein CKR_1060 [Clostridium kluyveri NBRC 12016] gi|219568127|dbj|BAH06111.1| hypothetical protein [Clostridium kluyveri NBRC 12016] Length = 183 Score = 60.5 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 18/162 (11%), Positives = 51/162 (31%), Gaps = 29/162 (17%) Query: 2 LKFLFSGIWISVVTLISFYMLF-------------LRSMDTMVENHVPPLAIKNTNII-- 46 LK + ++ + + + + + + +N++ + Sbjct: 23 LKVILIVFFLVAAVGAGVFFGYSKFLSDKNTDSNENMTTSNVTQAQTQTQSGENSSYLQH 82 Query: 47 -------KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSG 96 +I ++++ + Y V + + + L I D + +L Sbjct: 83 VVSAKTFDLSEFTI-NLADEGGKNYLKVNVYLGYDSKKLTDELTEKTPIIRDAIIEVLRT 141 Query: 97 PPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + D DN++ +I + +N L I+ V ++ Sbjct: 142 KKVEDIND---KNMDNIKIEIIQRINPMLEKGKINNVYFSDI 180 >gi|145298352|ref|YP_001141193.1| flagellar basal body-associated protein FliL [Aeromonas salmonicida subsp. salmonicida A449] gi|142851124|gb|ABO89445.1| Flagellar basal body-associated protein [Aeromonas salmonicida subsp. salmonicida A449] Length = 172 Score = 60.5 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 41/151 (27%), Gaps = 17/151 (11%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTM--------VENHVPPLAIKNTNIIKSELVSIPS 55 + + I + + L D + A K + + + + Sbjct: 22 MIIALAVIVLAGGGAGAWFMLSGSDKPAADAAAEGADAKPKDTAPKPSLYVGMPRPFVFN 81 Query: 56 VSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDN 112 VS G +K+ +V D + L + S + + + Sbjct: 82 VSGGQRDRLVKIKVQLMVRGTADENLAKQNIPLIEGTLLRIFSAATSEQLMTFEGK--EK 139 Query: 113 LRKKIKEDLNSRLGS----QFISEVLIDELN 139 LRK E+ LG I +VL Sbjct: 140 LRKDSLEECRRVLGDLVSSPVIEQVLFTGFV 170 >gi|294678999|ref|YP_003579614.1| flagellar basal body-associated protein FliL [Rhodobacter capsulatus SB 1003] gi|294477819|gb|ADE87207.1| flagellar basal body-associated protein FliL-1 [Rhodobacter capsulatus SB 1003] Length = 164 Score = 60.5 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 32/101 (31%), Gaps = 2/101 (1%) Query: 39 AIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPP 98 + + + I F +L + +E LK D L L Sbjct: 64 TEPQIAFVALDPMVISLTEGKARHLRFSAQLEVPLLKQKEVELLKPRVMDVLNGFLRAVE 123 Query: 99 MGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + D A LR ++ + +G ++++L+ E Sbjct: 124 VRDLEDPAA--LLRLRAQMLRRVQIVVGEGMVNDLLVIEFV 162 >gi|172059108|ref|YP_001806760.1| flagellar basal body-associated protein FliL [Burkholderia ambifaria MC40-6] gi|171991625|gb|ACB62544.1| flagellar basal body-associated protein FliL [Burkholderia ambifaria MC40-6] Length = 178 Score = 60.5 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 9/103 (8%) Query: 44 NIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMG 100 + +++ S+ +Q Y V LS + D + + L + LS Sbjct: 76 VFFPLDPLTVNLQSDDGVQHYLRVGLSLKLTDPKAQEQLTARMPEIRSRILLALSNKHPE 135 Query: 101 DFVQIKAFGFDNLRKKIKEDLNSRLGSQ----FISEVLIDELN 139 D + +L K+++E + + +VL E Sbjct: 136 DLATPEGK--RSLAKELRELIEQPTQPGNQRAKVDDVLFTEFV 176 >gi|126697830|ref|YP_001086727.1| flagellar basal body-associated protein [Clostridium difficile 630] gi|255099426|ref|ZP_05328403.1| flagellar basal body-associated protein [Clostridium difficile QCD-63q42] gi|115249267|emb|CAJ67080.1| Flagellar basal body-associated protein FliL [Clostridium difficile] Length = 147 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 20/133 (15%), Positives = 42/133 (31%), Gaps = 13/133 (9%) Query: 15 TLISFYMLFLRSMDTMVE-------NHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLV 67 + + + + + V+ T + E + + GV Y V Sbjct: 18 SAGAGFFILGEGGNKQVDKIAGLFIPTGKGKDEVKTENLDLEEMVLKLADEGV--RYLKV 75 Query: 68 KLSFIVNDSQER-SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLG 126 ++ + S + + D + DF A N++++IK LN +LG Sbjct: 76 SITVSYDSSYKDIEKNTPLIRDNIINCFMAKRADDF---TADNLKNIKEEIKNTLNIQLG 132 Query: 127 SQFISEVLIDELN 139 I + + Sbjct: 133 ENVIQNIYFTNIV 145 >gi|170698081|ref|ZP_02889162.1| flagellar basal body-associated protein FliL [Burkholderia ambifaria IOP40-10] gi|170137042|gb|EDT05289.1| flagellar basal body-associated protein FliL [Burkholderia ambifaria IOP40-10] Length = 178 Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 9/103 (8%) Query: 44 NIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMG 100 + +++ S+ +Q Y V LS + D + + L + LS Sbjct: 76 VFFPLDPLTVNLQSDDGVQHYLRVGLSLKLTDPKAQEQLTARMPEIRSRILLALSNKHPE 135 Query: 101 DFVQIKAFGFDNLRKKIKEDLNSRLGSQ----FISEVLIDELN 139 D + +L K+++E + + +VL E Sbjct: 136 DLATPEGK--HSLAKELRELIEQPTQPGNQRAKVDDVLFTEFV 176 >gi|78047548|ref|YP_363723.1| flagellar basal body-associated protein FliL [Xanthomonas campestris pv. vesicatoria str. 85-10] gi|78035978|emb|CAJ23669.1| flagellar basal body-associated protein FliL [Xanthomonas campestris pv. vesicatoria str. 85-10] Length = 183 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/148 (12%), Positives = 46/148 (31%), Gaps = 11/148 (7%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK---NTNIIKSELVSIPSVSN 58 + + G+ + + + H P + + + ++++ Sbjct: 35 ILLIAIGVVVLAAAGGGAWFFLGHKGEEKGGKHDAPKVAEVPKPAQYFPMDPAIVVNLAD 94 Query: 59 -GVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLS---GPPMGDFVQIKAFGFD 111 G Y V++ + D +E + +L LLS + D + Sbjct: 95 PGDGPQYLQVEVQLVTRDPEELKLITENAPAIRAHLLMLLSQVKAAEVADLAGKQKLQKS 154 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDELN 139 L + ++ + S G + + E+L Sbjct: 155 AL-AEAQKVMTSETGKKCVEELLFTSFV 181 >gi|283956789|ref|ZP_06374265.1| possible flagellar protein [Campylobacter jejuni subsp. jejuni 1336] gi|283791764|gb|EFC30557.1| possible flagellar protein [Campylobacter jejuni subsp. jejuni 1336] Length = 178 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 6/96 (6%) Query: 47 KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFV 103 + ++ +S+ Y + N + L + D + L+ + Sbjct: 84 PLDPFTLNLLSD-SGSRYVKCTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVS 142 Query: 104 QIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 K + L+ ++ +N L FI V + Sbjct: 143 TQKGK--ERLKDELVGKINEILTDGFIKNVYFTDFV 176 >gi|167585017|ref|ZP_02377405.1| flagellar basal body-associated protein FliL [Burkholderia ubonensis Bu] Length = 167 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/127 (14%), Positives = 38/127 (29%), Gaps = 9/127 (7%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER 79 Y+ + + V P + + +++ S +Q Y V LS + D++ + Sbjct: 41 YVFLSKQGVSHASGPVEPPPLAAPVFFPLDPLTVNLQSEDGIQHYLRVGLSLKITDAKAQ 100 Query: 80 SYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQ----FISE 132 L + LS + L ++K + + + Sbjct: 101 EQLTARMPEIRSRILLALSNKHPEELATPDGK--RALAGELKGLIEQPTQPGNQHAKVDD 158 Query: 133 VLIDELN 139 VL E Sbjct: 159 VLFTEFV 165 >gi|57238445|ref|YP_179576.1| flagellar basal body-associated protein FliL [Campylobacter jejuni RM1221] gi|57167249|gb|AAW36028.1| flagellar protein FliL [Campylobacter jejuni RM1221] gi|315058877|gb|ADT73206.1| Flagellar biosynthesis protein fliL [Campylobacter jejuni subsp. jejuni S3] Length = 178 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 6/96 (6%) Query: 47 KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFV 103 + ++ +S+ Y + N + L + D + L+ + Sbjct: 84 PLDPFTLNLLSD-SGSRYVKCTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVS 142 Query: 104 QIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 K + L+ ++ +N L FI V + Sbjct: 143 TQKGK--ERLKDELVGKINEILTDGFIKNVYFTDFV 176 >gi|161523224|ref|YP_001578236.1| flagellar basal body-associated protein FliL [Burkholderia multivorans ATCC 17616] gi|189348919|ref|YP_001944547.1| flagellar basal body-associated protein FliL [Burkholderia multivorans ATCC 17616] gi|160340653|gb|ABX13739.1| flagellar basal body-associated protein FliL [Burkholderia multivorans ATCC 17616] gi|189332941|dbj|BAG42011.1| flagellar FliL protein [Burkholderia multivorans ATCC 17616] Length = 177 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 38/127 (29%), Gaps = 9/127 (7%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER 79 +F+ + P + + +++ S+ +Q Y V LS + D + + Sbjct: 51 MYVFMGRQGATHASAAEPAPLAAPVFFPLDPLTVNLQSDDGVQHYLRVGLSLKLTDPKAQ 110 Query: 80 SYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQ----FISE 132 L + LS D L ++++ + + + Sbjct: 111 EQLTARMPEIRSRVLLALSNKHPEDIATPDGK--QALAQQLRNLIEEPTQPGNQRTKVDD 168 Query: 133 VLIDELN 139 VL E Sbjct: 169 VLFTEFV 175 >gi|115350089|ref|YP_771928.1| flagellar basal body-associated protein FliL [Burkholderia ambifaria AMMD] gi|115280077|gb|ABI85594.1| flagellar basal body-associated protein FliL [Burkholderia ambifaria AMMD] Length = 178 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 35/103 (33%), Gaps = 9/103 (8%) Query: 44 NIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMG 100 + +++ S+ +Q Y V LS + D + + L + LS Sbjct: 76 VFFPLDPLTVNLQSDDGVQHYLRVGLSLKLTDPKAQEQLTARMPEIRSRILLALSNKHPE 135 Query: 101 DFVQIKAFGFDNLRKKIKEDLNSRLGSQ----FISEVLIDELN 139 D + +L K+++E + + +VL E Sbjct: 136 DLATPEGK--HSLAKELRELIEQPTQPGNQRAKVDDVLFTEFV 176 >gi|153953787|ref|YP_001394552.1| hypothetical protein CKL_1162 [Clostridium kluyveri DSM 555] gi|146346668|gb|EDK33204.1| FliL [Clostridium kluyveri DSM 555] Length = 173 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/162 (11%), Positives = 51/162 (31%), Gaps = 29/162 (17%) Query: 2 LKFLFSGIWISVVTLISFYMLF-------------LRSMDTMVENHVPPLAIKNTNII-- 46 LK + ++ + + + + + + +N++ + Sbjct: 13 LKVILIVFFLVAAVGAGVFFGYSKFLSDKNTDSNENMTTSNVTQAQTQTQSGENSSYLQH 72 Query: 47 -------KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSG 96 +I ++++ + Y V + + + L I D + +L Sbjct: 73 VVSAKTFDLSEFTI-NLADEGGKNYLKVNVYLGYDSKKLTDELTEKTPIIRDAIIEVLRT 131 Query: 97 PPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + D DN++ +I + +N L I+ V ++ Sbjct: 132 KKVEDIND---KNMDNIKIEIIQRINPMLEKGKINNVYFSDI 170 >gi|254973923|ref|ZP_05270395.1| flagellar basal body-associated protein [Clostridium difficile QCD-66c26] gi|255312967|ref|ZP_05354550.1| flagellar basal body-associated protein [Clostridium difficile QCD-76w55] gi|255515726|ref|ZP_05383402.1| flagellar basal body-associated protein [Clostridium difficile QCD-97b34] gi|255648820|ref|ZP_05395722.1| flagellar basal body-associated protein [Clostridium difficile QCD-37x79] gi|260682039|ref|YP_003213324.1| flagellar basal body-associated protein [Clostridium difficile CD196] gi|260685637|ref|YP_003216770.1| flagellar basal body-associated protein [Clostridium difficile R20291] gi|306518935|ref|ZP_07405282.1| flagellar basal body-associated protein [Clostridium difficile QCD-32g58] gi|260208202|emb|CBA60550.1| flagellar basal body-associated protein [Clostridium difficile CD196] gi|260211653|emb|CBE01914.1| flagellar basal body-associated protein [Clostridium difficile R20291] Length = 147 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 42/133 (31%), Gaps = 13/133 (9%) Query: 15 TLISFYMLFLRSMDTMVE-------NHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLV 67 + + + + + ++ T + E + + GV Y V Sbjct: 18 SAGAGFFILGEGGNKQIDKIAGLFIPTGKGKDEVKTENLDLEEMVLKLADEGV--RYLKV 75 Query: 68 KLSFIVNDSQER-SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLG 126 ++ + S + + D + DF A N++++IK LN +LG Sbjct: 76 SITVSYDSSYKDIEKNTPLIRDNIINCFMAKRADDF---TADNLKNIKEEIKNTLNIQLG 132 Query: 127 SQFISEVLIDELN 139 I + + Sbjct: 133 ENVIQNIYFTNIV 145 >gi|170742327|ref|YP_001770982.1| flagellar basal body-associated protein FliL [Methylobacterium sp. 4-46] gi|168196601|gb|ACA18548.1| flagellar basal body-associated protein FliL [Methylobacterium sp. 4-46] Length = 166 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/138 (15%), Positives = 44/138 (31%), Gaps = 6/138 (4%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAY 64 L +G + ++ Y E AI ++ + P V + + Sbjct: 30 LVAGALVVLLLAGGGYGFVKYRAGKTEEVAEAKPAITFLDVRDLVMNLTPDVGQPNV-RF 88 Query: 65 FLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDL 121 +K++ V+D + L D + DF + G LR+++ + Sbjct: 89 IKLKVALEVHDPKTAAEIQPLMPRIEDAFQVYIREMRPADFD--GSIGTYRLREELLRRV 146 Query: 122 NSRLGSQFISEVLIDELN 139 N + + VL E Sbjct: 147 NVAVYPARVDAVLFKEFV 164 >gi|220932513|ref|YP_002509421.1| flagellar basal body-associated protein FliL [Halothermothrix orenii H 168] gi|219993823|gb|ACL70426.1| flagellar basal body-associated protein FliL [Halothermothrix orenii H 168] Length = 145 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/139 (15%), Positives = 47/139 (33%), Gaps = 9/139 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 F+ I + ++ + Y T ++ + I T + ++S Sbjct: 11 FIGIVIMMVLIAAGTSYGFMTYFDRTNSQHVLESKDIGPT--YSLGDFIV-NLSGTGGYQ 67 Query: 64 YFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 Y + V+ L D + ++L M D + A ++ +++ + Sbjct: 68 YIKASIVVEVSQDSVIRELDKRSPQIRDIIISILRDQKMADIEEPGA---RTIKNRVRAE 124 Query: 121 LNSRLGSQFISEVLIDELN 139 LN L + I+ V +L Sbjct: 125 LNQVLTTGKITSVWFTQLV 143 >gi|90423019|ref|YP_531389.1| flagellar basal body-associated protein FliL [Rhodopseudomonas palustris BisB18] gi|90105033|gb|ABD87070.1| flagellar basal body-associated protein FliL [Rhodopseudomonas palustris BisB18] Length = 159 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/140 (15%), Positives = 43/140 (30%), Gaps = 9/140 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS-NGV 60 L + + ++ + +F R + + I ++I G Sbjct: 21 LFIIVGAVVGVLLIGGGTWFMFFRG---HGAEETHKVEVVKPVFIDVPEMTINLAGMPGE 77 Query: 61 LQAYFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 Y VK+ V D + TD T L D + G L++++ Sbjct: 78 RIQYLRVKVVLEVKDEKAVEQIKPTMPRVTDIFQTYLRELRSSDIS--GSAGLFRLKEEM 135 Query: 118 KEDLNSRLGSQFISEVLIDE 137 +N + ++ VL E Sbjct: 136 LRRVNLAVAPGVVNVVLFKE 155 >gi|86150075|ref|ZP_01068303.1| flagellar protein FliL [Campylobacter jejuni subsp. jejuni CF93-6] gi|86151964|ref|ZP_01070177.1| flagellar protein FliL [Campylobacter jejuni subsp. jejuni 260.94] gi|86152897|ref|ZP_01071102.1| Flagellar basal body-associated protein FliL [Campylobacter jejuni subsp. jejuni HB93-13] gi|121613276|ref|YP_001001063.1| flagellar basal body-associated protein FliL [Campylobacter jejuni subsp. jejuni 81-176] gi|148926758|ref|ZP_01810438.1| possible flagellar protein [Campylobacter jejuni subsp. jejuni CG8486] gi|157415641|ref|YP_001482897.1| flagellar basal body-associated protein FliL [Campylobacter jejuni subsp. jejuni 81116] gi|167005964|ref|ZP_02271722.1| possible flagellar protein [Campylobacter jejuni subsp. jejuni 81-176] gi|315124843|ref|YP_004066847.1| flagellar basal body-associated protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|85839521|gb|EAQ56782.1| flagellar protein FliL [Campylobacter jejuni subsp. jejuni CF93-6] gi|85841072|gb|EAQ58321.1| flagellar protein FliL [Campylobacter jejuni subsp. jejuni 260.94] gi|85843782|gb|EAQ60992.1| Flagellar basal body-associated protein FliL [Campylobacter jejuni subsp. jejuni HB93-13] gi|87249864|gb|EAQ72823.1| flagellar protein FliL [Campylobacter jejuni subsp. jejuni 81-176] gi|145845122|gb|EDK22218.1| possible flagellar protein [Campylobacter jejuni subsp. jejuni CG8486] gi|157386605|gb|ABV52920.1| possible flagellar protein [Campylobacter jejuni subsp. jejuni 81116] gi|284926623|gb|ADC28975.1| flagellar basal body-associated protein FliL [Campylobacter jejuni subsp. jejuni IA3902] gi|307748285|gb|ADN91555.1| Flagellar protein FliL [Campylobacter jejuni subsp. jejuni M1] gi|315018565|gb|ADT66658.1| flagellar basal body-associated protein [Campylobacter jejuni subsp. jejuni ICDCCJ07001] gi|315928051|gb|EFV07370.1| flagellar basal body-associated protein FliL family protein [Campylobacter jejuni subsp. jejuni DFVF1099] gi|315931441|gb|EFV10408.1| flagellar basal body-associated protein FliL family protein [Campylobacter jejuni subsp. jejuni 327] Length = 178 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 6/96 (6%) Query: 47 KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFV 103 + ++ +S+ Y + N + L + D + L+ + Sbjct: 84 PLDPFTLNLLSD-SGSRYVKCTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVS 142 Query: 104 QIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 K + L+ ++ +N L FI V + Sbjct: 143 TQKGK--ERLKDELVGKINEILTDGFIKNVYFTDFV 176 >gi|114562366|ref|YP_749879.1| flagellar basal body-associated protein FliL [Shewanella frigidimarina NCIMB 400] gi|114333659|gb|ABI71041.1| flagellar basal body-associated protein FliL [Shewanella frigidimarina NCIMB 400] Length = 173 Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 18/154 (11%), Positives = 47/154 (30%), Gaps = 19/154 (12%) Query: 3 KFLF---SGIWISVVTLISFYMLFLRSMDTMVENH--------VPPLAIKNTNIIKSELV 51 K + G+ ++++ + ++ P++++ N + Sbjct: 20 KLVIFGGIGLVLALLIGGGVWFFMGSDEPENTDSQTETETSIDAKPMSMEEANYVGMPRP 79 Query: 52 SIPSVSNGVLQAYFLVKLSFIV--NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFG 109 + ++ +K+ +V +DS + D L T S + Sbjct: 80 FLFNLPGVDRARLVEIKVQLMVRGDDSVLTQKHIPLIEDALLTTFSAADVQKLSTQAGKD 139 Query: 110 FDNLRK----KIKEDLNSRLGSQFISEVLIDELN 139 LR+ ++ L G + + +VL Sbjct: 140 --ELRQLALLNVQNTLQPITGKKVVEKVLFTGFV 171 >gi|257866388|ref|ZP_05646041.1| predicted protein [Enterococcus casseliflavus EC30] gi|257871299|ref|ZP_05650952.1| predicted protein [Enterococcus gallinarum EG2] gi|257873096|ref|ZP_05652749.1| predicted protein [Enterococcus casseliflavus EC10] gi|257876001|ref|ZP_05655654.1| predicted protein [Enterococcus casseliflavus EC20] gi|257800346|gb|EEV29374.1| predicted protein [Enterococcus casseliflavus EC30] gi|257805463|gb|EEV34285.1| predicted protein [Enterococcus gallinarum EG2] gi|257807260|gb|EEV36082.1| predicted protein [Enterococcus casseliflavus EC10] gi|257810167|gb|EEV38987.1| predicted protein [Enterococcus casseliflavus EC20] Length = 170 Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 10/148 (6%) Query: 1 MLKFL-FSGIWISVVTLISF----YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPS 55 M+ L I + ++ + L + I+ + + Sbjct: 22 MVVLLPILLIVVVGGSIGGTLVTNHFLTGEKTAAAETAKDSSKISSDEAIVALDEFLVNL 81 Query: 56 -VSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFD 111 + Q Y V LS +V D ++ + + D + LL + A Sbjct: 82 AKEDNQEQQYMKVNLSILVADEEKSAEATKNVAVIRDSVVNLLRQQKASGILS-SAESVP 140 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDELN 139 NL+K +KE +N GS+ +V + +L Sbjct: 141 NLKKALKETINQEYGSEIAKDVYVTDLV 168 >gi|330445372|ref|ZP_08309024.1| flagellar basal body-associated FliL family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328489563|dbj|GAA03521.1| flagellar basal body-associated FliL family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 159 Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 12/149 (8%), Positives = 32/149 (21%), Gaps = 13/149 (8%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN--------IIKSELVSIPS 55 + S + ++ L D +A + + + Sbjct: 9 MIISAAVVVLLLAGGIGFWLLSGDDAAEPQQAAEVAQQGAVKAPVMSAYYVVLPQPFTFN 68 Query: 56 VSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF-- 110 V+ +K+ +V + + L + Sbjct: 69 VTGDSRDRVVQIKVQLMVRGDKNEALAKQHTPLIESTLLQAFGVATVEQLRNPNGRDQLR 128 Query: 111 DNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + +K + G+ + VL Sbjct: 129 QQALEAVKATMVKVAGTPAVERVLFTGFV 157 >gi|167560936|ref|ZP_02353852.1| flagellar basal body-associated protein FliL [Burkholderia oklahomensis EO147] gi|167568196|ref|ZP_02361070.1| flagellar basal body-associated protein FliL [Burkholderia oklahomensis C6786] Length = 166 Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 20/130 (15%), Positives = 37/130 (28%), Gaps = 10/130 (7%) Query: 17 ISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDS 76 Y L P + E +++ S+ +Q Y V LS + D+ Sbjct: 38 GGTYF-VLAKEGVRGAAPSAPAPLAVPVFFALEPLTVNLQSDDGIQHYLRVGLSLKLTDA 96 Query: 77 QERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQ----F 129 + + Y + LS ++ L ++K + Sbjct: 97 KAQEYLTQHMPELRSRILLALSNKHPEQLATLEGK--RALADELKTLIEQPTQPGNRSAR 154 Query: 130 ISEVLIDELN 139 I +VL E Sbjct: 155 IDDVLFTEFV 164 >gi|255262081|ref|ZP_05341423.1| flagellar basal body-associated protein FliL [Thalassiobium sp. R2A62] gi|255104416|gb|EET47090.1| flagellar basal body-associated protein FliL [Thalassiobium sp. R2A62] Length = 164 Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 22/160 (13%), Positives = 46/160 (28%), Gaps = 23/160 (14%) Query: 1 MLKF--LFSGIWISVVTLISFYM--------------LFLRSMDTMVENHVPPLAIKNTN 44 M K + + + + + + S +V + + Sbjct: 1 MKKILPILIALIGTGTGVGAGFFNKSNQVSNEATEYACGPSSDGDLVMEEPDSVDSSDFE 60 Query: 45 IIKSE-LVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK--EIATDYLYTLLSGPPMG- 100 K +P V++G +Q ++ LS V ++ + + D L Sbjct: 61 YAKLNNQFVVPVVTDGRVQNLVILTLSIEVAPGEKETVYQREPKLRDAFIQTLFNHANIG 120 Query: 101 --DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + D LR ++ G +VLI E+ Sbjct: 121 GFAGEFTNSNTMDILRHELLVSAKDVFG-NLAKDVLIIEI 159 >gi|332994115|gb|AEF04170.1| flagellar basal body-associated protein FliL [Alteromonas sp. SN2] Length = 178 Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 17/161 (10%), Positives = 45/161 (27%), Gaps = 24/161 (14%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN---------------I 45 M+ + + + ++++LF + + + + Sbjct: 18 MMLIIIIAVVLVGGGAAAYFLLFAGGEEPVAAEQLAETDEQAATEAAAPGGSAEVGTALY 77 Query: 46 IKSELVSIPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDF 102 + + +V +K+ +V ++ + + L + S D Sbjct: 78 VAMPRPFVFNVPGTGRDRLVQIKVQLLVRGSDNEELAKTHIPLIEGTLLQVFSTSNADDL 137 Query: 103 VQIKAFGFDNLRKKIKEDLNSRL----GSQFISEVLIDELN 139 V LR++ ++ L GS + VL Sbjct: 138 VTEAGK--IELREQAVTEVQKVLKDIAGSDVVERVLFTGFV 176 >gi|88596075|ref|ZP_01099312.1| flagellar protein FliL [Campylobacter jejuni subsp. jejuni 84-25] gi|205356151|ref|ZP_03222918.1| possible flagellar protein [Campylobacter jejuni subsp. jejuni CG8421] gi|218563012|ref|YP_002344791.1| flagellar basal body-associated protein FliL [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|88190916|gb|EAQ94888.1| flagellar protein FliL [Campylobacter jejuni subsp. jejuni 84-25] gi|112360718|emb|CAL35517.1| putative flagellar protein [Campylobacter jejuni subsp. jejuni NCTC 11168] gi|205345994|gb|EDZ32630.1| possible flagellar protein [Campylobacter jejuni subsp. jejuni CG8421] gi|315929539|gb|EFV08731.1| flagellar basal body-associated protein FliL family protein [Campylobacter jejuni subsp. jejuni 305] Length = 178 Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 30/96 (31%), Gaps = 6/96 (6%) Query: 47 KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFV 103 + ++ +S+ Y + N + L + D + L+ + Sbjct: 84 PLDPFTLNLLSD-SGSRYVKCTIELEQNSELLKPELDKKVPVIRDIIIRTLTAKTFEEVS 142 Query: 104 QIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 K + L+ ++ +N L FI V + Sbjct: 143 TQKGK--ERLKDELVGKINEILTDGFIKNVYFTDFV 176 >gi|238025646|ref|YP_002909878.1| Flagellar protein FliL [Burkholderia glumae BGR1] gi|237880311|gb|ACR32642.1| Flagellar protein FliL [Burkholderia glumae BGR1] Length = 166 Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 41/135 (30%), Gaps = 10/135 (7%) Query: 12 SVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSF 71 + V + + FLR + V P + + +++ S+ + Y + ++ Sbjct: 33 AAVGEAAAWYAFLRHEGMVEAAKVGPPPLSTPVYFPMDPMTVNLQSDDEMH-YVRIGITL 91 Query: 72 IVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQ 128 + D + Y + LS D L +++ + Sbjct: 92 KLTDPSAQDYLTQHMPEIRSRILMALSNKHPQDLATSD--DKRQLVAQLRALIERPTQPG 149 Query: 129 ----FISEVLIDELN 139 + +VLI + Sbjct: 150 NRSARVDQVLITDFV 164 >gi|302343751|ref|YP_003808280.1| flagellar basal body-associated protein FliL [Desulfarculus baarsii DSM 2075] gi|301640364|gb|ADK85686.1| flagellar basal body-associated protein FliL [Desulfarculus baarsii DSM 2075] Length = 252 Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 24/148 (16%), Positives = 54/148 (36%), Gaps = 16/148 (10%) Query: 4 FLFSG---IWISVVTLISFYMLFLRSMDTMVENHVPP-------LAIKNTNIIKSELVSI 53 L G + +++ F+ + +PP ++++ ++ E + Sbjct: 104 LLAVGSLVLVVAIAGGTGFWFSRQEAQKLPDAESLPPWMVRQAMPSVEDELMLGLEPFIV 163 Query: 54 PSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGF 110 P + + V ++ D +S L E D +Y L P + + Sbjct: 164 PLL-DTKQGQILRVVVTLESMDGLSKSSLIEKNLDVRDVIYRALRDRPASELQKANQNRL 222 Query: 111 DNLRKKIKEDLNSRLGSQFISEVLIDEL 138 L+ +IK +LN LG +++ +V + Sbjct: 223 --LQAQIKAELNHALGREWVHKVYFSQF 248 >gi|74055040|gb|AAZ95845.1| FliL [Aeromonas hydrophila] Length = 171 Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 44/150 (29%), Gaps = 16/150 (10%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVP-------PLAIKNTNIIKSELVSIPSV 56 + + I + +++ E A++ + + + +V Sbjct: 22 MVVALAVIVLGGGAGAWLMLSGGDKPAAEAAAEGKDAKPKEEAVQPSLYVGMPRPFVFNV 81 Query: 57 SNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113 S G +K+ +V D + L + S + + + L Sbjct: 82 SGGQRDRLVQIKIQLMVRGAADETLAKQNIPLIEGTLLRVFSAATSEQLMTFEGK--EKL 139 Query: 114 R----KKIKEDLNSRLGSQFISEVLIDELN 139 R ++ + LN + S I +VL Sbjct: 140 RKDSLEECRRVLNDLVSSPVIEQVLFTGFV 169 >gi|225850266|ref|YP_002730500.1| flagellar basal body-associated protein FliL [Persephonella marina EX-H1] gi|225646148|gb|ACO04334.1| flagellar basal body-associated protein FliL [Persephonella marina EX-H1] Length = 170 Score = 59.7 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 16/135 (11%), Positives = 43/135 (31%), Gaps = 12/135 (8%) Query: 15 TLISFY-MLFLRSMDTMVENHVPPLAIKNT-NIIKSELVS-----IPSVSNGVLQAYFLV 67 + Y L L + + + +I ++ I ++++ + V Sbjct: 34 GGGAAYKFLVLDKQKEEKQENKAEKIQEEIKDIENLGIMFEVGTFIVNLADKDADRFLKV 93 Query: 68 KLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSR 124 + + + Q + D + TLL + + L+++I + +N+ Sbjct: 94 TVILEIENEQVKMEVEKRLPQIKDAITTLLFTKNSRELKTAEGIEL--LKEEIIKRVNAI 151 Query: 125 LGSQFISEVLIDELN 139 L + V + Sbjct: 152 LPLGGVKNVYFTDFV 166 >gi|255523694|ref|ZP_05390660.1| flagellar basal body-associated protein FliL [Clostridium carboxidivorans P7] gi|255512563|gb|EET88837.1| flagellar basal body-associated protein FliL [Clostridium carboxidivorans P7] Length = 183 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 53/162 (32%), Gaps = 28/162 (17%) Query: 2 LKFLFSGIWISVVTLISFYMLF-LRSMDTMVENHVPPLAIKNTNIIK----------SEL 50 +KF+ G+ ++ Y + + D + P A++ E Sbjct: 22 IKFIAIGLVALIIVGAGGYFGYSKFAKDKGTQKTAAPAAVQTAQTTTQAKTTQNQSYLEQ 81 Query: 51 VS----------IPSVSNGVLQAYFLVKLSFIVNDSQERSYL----KEIATDYLYTLLSG 96 + + ++++ + Y K+ + + + K + D + +L Sbjct: 82 IVSEKNIGLDECLVNLADEDGKRYVKTKIFVGYDKNSKLETELTEKKPLIRDAVIAVLRS 141 Query: 97 PPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + D+L+ ++ + +N L I+ V +L Sbjct: 142 KKAAEI---TPKNMDSLKMELIQKINPLLKKGQINNVYFSDL 180 >gi|302037614|ref|YP_003797936.1| flagellar basal body-associated protein FliL [Candidatus Nitrospira defluvii] gi|300605678|emb|CBK42011.1| Flagellar basal body-associated protein FliL [Candidatus Nitrospira defluvii] Length = 178 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 21/162 (12%), Positives = 44/162 (27%), Gaps = 28/162 (17%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNT----------------- 43 M+ + +G+ + + L + +F E + Sbjct: 20 MVIIIVAGVLV--LGLGGAFAMFKMMGGASGEKAHGENGGEKQAAHGEAEDKGGGHGAVA 77 Query: 44 ---NIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGP 97 I + + + Y V L ++S +K D + LL+G Sbjct: 78 DASAIADLDPFIVNLADTPEI-RYLKVTLKVEADNSNTVEQIKARTPQIRDAILVLLTGL 136 Query: 98 PMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + LR+ I + +N L + + E Sbjct: 137 DSATARSPQGK--HKLREDITDRINGLLPKKSVKSTYFTEFV 176 >gi|158320525|ref|YP_001513032.1| flagellar basal body-associated protein FliL [Alkaliphilus oremlandii OhILAs] gi|158140724|gb|ABW19036.1| flagellar basal body-associated protein FliL [Alkaliphilus oremlandii OhILAs] Length = 141 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 22/137 (16%), Positives = 42/137 (30%), Gaps = 11/137 (8%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAY 64 + GI S V + Y ++ + + S G +++ Sbjct: 10 VLIGIVTSAVVFGAMYYFTQNKNG--EQSKEIAIKYQTYEY-DLGEFSTNL---GSTRSF 63 Query: 65 FLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDL 121 F + V D L D + ++L G + + L+K+I E L Sbjct: 64 FKGHIVIEVLDETLLEKLPQKNAAIRDGVISILIGRTSDKLLSPEGQS--ELKKEIIEML 121 Query: 122 NSRLGSQFISEVLIDEL 138 + G ++ V E Sbjct: 122 SKIAGENRVTNVYFKEY 138 >gi|120598256|ref|YP_962830.1| flagellar basal body-associated protein FliL [Shewanella sp. W3-18-1] gi|146293666|ref|YP_001184090.1| flagellar basal body-associated protein FliL [Shewanella putrefaciens CN-32] gi|120558349|gb|ABM24276.1| flagellar basal body-associated protein FliL [Shewanella sp. W3-18-1] gi|145565356|gb|ABP76291.1| flagellar basal body-associated protein FliL [Shewanella putrefaciens CN-32] Length = 171 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 17/146 (11%), Positives = 43/146 (29%), Gaps = 10/146 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVEN-----HVPPLAIKNTNIIKSELVSIPSVSN 58 F+ G+ ++++ + + S ++ E P + + + ++ Sbjct: 24 FIGIGVLVALLIGGALWFFLGSSDESSSEAVEAVVETPSNDKLVASYVPMPRPFLFNLPG 83 Query: 59 GVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 +K+ +V +D + D L T S + Sbjct: 84 PDRARLVEIKVQLMVRGSDDEVLIQKHIPLIEDALLTTFSSSDVQKLSTQAGKDEARQLA 143 Query: 116 --KIKEDLNSRLGSQFISEVLIDELN 139 ++ L S G + + +VL Sbjct: 144 LLSVQNTLQSVTGRKVVEKVLFTGFV 169 >gi|325567521|ref|ZP_08144188.1| hypothetical protein HMPREF9087_0477 [Enterococcus casseliflavus ATCC 12755] gi|325158954|gb|EGC71100.1| hypothetical protein HMPREF9087_0477 [Enterococcus casseliflavus ATCC 12755] Length = 167 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 10/148 (6%) Query: 1 MLKFL-FSGIWISVVTLISF----YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPS 55 M+ L I + ++ + L + I+ + + Sbjct: 19 MVVLLPILLIVVVGGSIGGTLVTNHFLTGEKTAAAETAKDSSKISSDEAIVALDEFLVNL 78 Query: 56 -VSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFD 111 + Q Y V LS +V D ++ + + D + LL + A Sbjct: 79 AKEDNQEQQYMKVNLSILVADEEKSAEATKNVAVIRDSVVNLLRQQKASGILS-SAESVP 137 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDELN 139 NL+K +KE +N GS+ +V + +L Sbjct: 138 NLKKALKETINQEYGSEIAKDVYVTDLV 165 >gi|323496549|ref|ZP_08101603.1| flagellar basal body-associated protein FliL [Vibrio sinaloensis DSM 21326] gi|323318393|gb|EGA71350.1| flagellar basal body-associated protein FliL [Vibrio sinaloensis DSM 21326] Length = 165 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 16/128 (12%), Positives = 35/128 (27%), Gaps = 8/128 (6%) Query: 20 YMLFLRSMDTMVENHVPPLAI---KNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV--- 73 + L E + + + I +V+ +K+ +V Sbjct: 36 FFLMGSDEPAAEEAAAQEEVVVSTEPVAYVNIAQPFIFNVTGDKRDRLVQIKVQLMVRGT 95 Query: 74 NDSQERSYLKEIATDYLYTLLSGPPMGDFV--QIKAFGFDNLRKKIKEDLNSRLGSQFIS 131 + Y + L + + + + D + IK L+ +G I Sbjct: 96 ENENLARYHSPLVESSLLSTFASATVEQLRTANGRIELRDKATEDIKASLSRAVGQPVIE 155 Query: 132 EVLIDELN 139 VL + Sbjct: 156 RVLFTDFV 163 >gi|304409953|ref|ZP_07391572.1| flagellar basal body-associated protein FliL [Shewanella baltica OS183] gi|307302334|ref|ZP_07582092.1| flagellar basal body-associated protein FliL [Shewanella baltica BA175] gi|304351362|gb|EFM15761.1| flagellar basal body-associated protein FliL [Shewanella baltica OS183] gi|306914372|gb|EFN44793.1| flagellar basal body-associated protein FliL [Shewanella baltica BA175] Length = 175 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 18/149 (12%), Positives = 42/149 (28%), Gaps = 18/149 (12%) Query: 7 SGIWISVVTLISFYMLFLRSMDTMV---------ENHVPPLAIKNTNIIKSELVSIPSVS 57 G+ +++ + S + + I + + + ++ Sbjct: 27 VGVLVALFIGGGVWFFMGSSSEEVPVAAADGTVQAEAPATGDIATASYVPMPRPFLFNLP 86 Query: 58 NGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 +K+ +V +D + D L T SG + LR Sbjct: 87 GPDRARLVEIKVQLMVRGTDDDVLTQKHIPLIEDALLTTFSGADVQKLSTQAGKD--ELR 144 Query: 115 K----KIKEDLNSRLGSQFISEVLIDELN 139 + ++ L S G + + +VL Sbjct: 145 QLALLSVQNTLQSVTGRKVVEKVLFTGFV 173 >gi|222053612|ref|YP_002535974.1| flagellar basal body-associated protein FliL [Geobacter sp. FRC-32] gi|221562901|gb|ACM18873.1| flagellar basal body-associated protein FliL [Geobacter sp. FRC-32] Length = 166 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/150 (12%), Positives = 49/150 (32%), Gaps = 17/150 (11%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKN-----------TNIIKSELVS 52 F+ G + + +I+ + + + A + E Sbjct: 18 FIIIGAAVLALIVIAVIVAMMMGGGKGEKPAKAQEAKAEKKGEGGEKASAATVYPLEPFI 77 Query: 53 IPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFG 109 + ++ +G Y +K+ F + ++ ++ + D + LL+ M + ++ Sbjct: 78 V-NIYDGQELRYLKIKVEFEMAAAEIKTEIDAQQSALRDAVLVLLTTKTMREVQDLQGKN 136 Query: 110 FDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 LR +I LG + +V + Sbjct: 137 --QLRDEILSTTVKILGPGKVIKVYFTDFV 164 >gi|319427065|gb|ADV55139.1| flagellar basal body protein, FliL [Shewanella putrefaciens 200] Length = 169 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 16/144 (11%), Positives = 43/144 (29%), Gaps = 8/144 (5%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHV---PPLAIKNTNIIKSELVSIPSVSNGV 60 F+ G+ ++++ + + S ++ E + + + + ++ Sbjct: 24 FIGIGVLVALLIGGALWFFLGSSDESSSEAVEAVVETPSNVVASYVPMPRPFLFNLPGPD 83 Query: 61 LQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK-- 115 +K+ +V +D + D L T S + Sbjct: 84 RARLVEIKVQLMVRGSDDEVLIQKHIPLIEDALLTTFSSSDVQKLSTQAGKDEARQLALL 143 Query: 116 KIKEDLNSRLGSQFISEVLIDELN 139 ++ L S G + + +VL Sbjct: 144 SVQNTLQSVTGRKVVEKVLFTGFV 167 >gi|169831902|ref|YP_001717884.1| flagellar basal body-associated protein FliL [Candidatus Desulforudis audaxviator MP104C] gi|169638746|gb|ACA60252.1| flagellar basal body-associated protein FliL [Candidatus Desulforudis audaxviator MP104C] Length = 161 Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/90 (21%), Positives = 33/90 (36%), Gaps = 6/90 (6%) Query: 53 IPSVSNGVLQAYFLVKLSFIVND----SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAF 108 + ++++ YF V L+ D E + D L LL D + Sbjct: 71 VVNLADPPGSRYFRVALTLEYVDSGTLETELKEKEHRIRDGLVFLLRQKSSFDLKGPEV- 129 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + +R++I ++N L I EV E Sbjct: 130 -PETIREEILREINRHLEKGEIEEVYFTEF 158 >gi|197120189|ref|YP_002140616.1| flagellar basal body-associated protein FliL [Geobacter bemidjiensis Bem] gi|197089549|gb|ACH40820.1| flagellar basal body-associated protein FliL [Geobacter bemidjiensis Bem] Length = 174 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 41/117 (35%), Gaps = 6/117 (5%) Query: 26 SMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI 85 A I E + ++ +G Y VK+ F + + Q + L+ Sbjct: 59 GGGHGAPAKEGEGAAAGATIYPLEPFIV-NIYDGAELRYLKVKVEFEMANPQVKPELEAK 117 Query: 86 ---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 D + LL+ M + ++ LR++I ++ + I++V + Sbjct: 118 MAPLRDAILILLTTKTMQEIQDLQGKN--QLREQILAAVSKVVPPSKITKVYFTDFV 172 >gi|268316336|ref|YP_003290055.1| flagellar basal body-associated protein FliL [Rhodothermus marinus DSM 4252] gi|262333870|gb|ACY47667.1| flagellar basal body-associated protein FliL [Rhodothermus marinus DSM 4252] Length = 184 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 20/137 (14%), Positives = 47/137 (34%), Gaps = 6/137 (4%) Query: 6 FSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYF 65 +G W++ V S + T + ++ ++ + I + + Y Sbjct: 49 AAGAWLAYVYYPSLAQAAEQFSGTDDDTGEEAKPVEYGQFMELQGFII-NPAGTDGTRYL 107 Query: 66 LVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN 122 ++ L + LKE D + LL + + I L++++++ +N Sbjct: 108 MINLGLESAEGGVLEELKEKEVVVRDTVLKLLGQRTVEELADISLR--TQLKQELRDAVN 165 Query: 123 SRLGSQFISEVLIDELN 139 + L I V + Sbjct: 166 AVLRKGKIDRVYFTQYV 182 >gi|260776478|ref|ZP_05885373.1| flagellar biosynthesis protein FliL [Vibrio coralliilyticus ATCC BAA-450] gi|260607701|gb|EEX33966.1| flagellar biosynthesis protein FliL [Vibrio coralliilyticus ATCC BAA-450] Length = 165 Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 16/128 (12%), Positives = 37/128 (28%), Gaps = 8/128 (6%) Query: 20 YMLFLRSMDTMVENHVPP---LAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV--- 73 + L S +E ++ + + + +V+ +K+ +V Sbjct: 36 FFLMGSSEPEQMEETTQQEVVVSTDPVSYVNIAQPFLFNVTGDKKDRLVQIKVQLMVRGT 95 Query: 74 NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIK-AFGF-DNLRKKIKEDLNSRLGSQFIS 131 ++ Y + L + + + D + IK L +G I Sbjct: 96 DNENLARYHSPLIESSLLGTFASATVDQLRSVNGRVELRDKATEDIKASLTRAVGQPVIE 155 Query: 132 EVLIDELN 139 VL + Sbjct: 156 RVLFTDFV 163 >gi|329901245|ref|ZP_08272770.1| Flagellar biosynthesis protein fliL [Oxalobacteraceae bacterium IMCC9480] gi|327549177|gb|EGF33769.1| Flagellar biosynthesis protein fliL [Oxalobacteraceae bacterium IMCC9480] Length = 173 Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 47/139 (33%), Gaps = 7/139 (5%) Query: 7 SGIWISVVTLISFYMLFLRSMDTMVENHVPPL-AIKNTNIIKSELVSIPSVSNGVLQAYF 65 + + +++ + Y L + E+ A K + + ++ ++ Y Sbjct: 34 AVVVLALAGGGAGYFLMGKKAKPAGEHAEESHEAAKAPVFLVLDPFTV-NLQQEAGDQYL 92 Query: 66 LVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFG--FDNLRKKIKED 120 + ++ V D ++ +K + +LS + D++ IK+ Sbjct: 93 QIAMTVQVADDKQSEEIKVYLPQIRSRVLMVLSSKKASEINTPDGKKQLADDIITAIKKP 152 Query: 121 LNSRLGSQFISEVLIDELN 139 + R Q +++V Sbjct: 153 FSERGKPQKVNDVFFTSFV 171 >gi|294140209|ref|YP_003556187.1| flagellar protein FliL [Shewanella violacea DSS12] gi|293326678|dbj|BAJ01409.1| flagellar protein FliL [Shewanella violacea DSS12] Length = 173 Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 16/147 (10%), Positives = 41/147 (27%), Gaps = 14/147 (9%) Query: 6 FSGIWISVVTLISFYMLFLRSMDT-------MVENHVPPLAIKNTNIIKSELVSIPSVSN 58 G+ + ++ + + S E P+ + + ++ Sbjct: 26 VIGLVLVLIIAGALWFFMGTSDSPTDSEDLDGAEEIQEPMNTGEAFYVGMPRPFLFNLPG 85 Query: 59 GVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 +K+ +V +D + D L T S + + + + Sbjct: 86 ANRSRLVEIKVQLMVRGADDDVLIKKHIPLIEDALLTTFSSADVQKLSTLAGKD-EMRQL 144 Query: 116 KIKEDLNSRL---GSQFISEVLIDELN 139 + N+ L G + + +VL Sbjct: 145 ALLNVQNTLLPVTGRKIVEKVLFTGFV 171 >gi|310816844|ref|YP_003964808.1| flagellar basal body-associated protein FliL [Ketogulonicigenium vulgare Y25] gi|308755579|gb|ADO43508.1| flagellar basal body-associated protein FliL [Ketogulonicigenium vulgare Y25] Length = 143 Score = 58.9 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 42/145 (28%), Gaps = 10/145 (6%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPP----LAIKNTNIIKSELVSIPSV 56 ML + +G+ + + Y+ + + + VP A + + I E + + Sbjct: 1 MLSMIVAGV-LGLAGAAGGYLAVAQGLVRLPGGDVPVEAAFSAPEPVSFIAMEPLIVNLP 59 Query: 57 SNGVLQAYFLVKLSFIVNDSQE--RSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 + Y V + + TD L L D Sbjct: 60 TASAG-RYLRFTAQLEVPAASAPEVERVMPRITDVLNGYLRAVTPADLADASGLMRMR-- 116 Query: 115 KKIKEDLNSRLGSQFISEVLIDELN 139 + + + G + +L+ EL Sbjct: 117 GMMLRRVQAVAGEGNVRNILVMELV 141 >gi|78224293|ref|YP_386040.1| flagellar basal body-associated protein FliL [Geobacter metallireducens GS-15] gi|78195548|gb|ABB33315.1| Flagellar basal body-associated protein FliL [Geobacter metallireducens GS-15] Length = 174 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 18/96 (18%), Positives = 36/96 (37%), Gaps = 6/96 (6%) Query: 47 KSELVSIPSVSNGVLQAYFLVKLSFI---VNDSQERSYLKEIATDYLYTLLSGPPMGDFV 103 E + ++ +G Y VK+ F + +E + D + LL+ + D Sbjct: 80 PMEPFIV-NIYDGQELRYLRVKVEFETASADAKKEIELRQAPLRDAILVLLTTKTLQDVQ 138 Query: 104 QIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ LR +I +N L +S+V + Sbjct: 139 DLQGKN--QLRDEIMVAVNKILPPGKVSKVYFTDFV 172 >gi|330814984|ref|YP_004358689.1| Flagellar protein FliL [Burkholderia gladioli BSR3] gi|327367377|gb|AEA58733.1| Flagellar protein FliL [Burkholderia gladioli BSR3] Length = 164 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 20/145 (13%), Positives = 43/145 (29%), Gaps = 11/145 (7%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + F G+ I+ + + LR H P ++ E +++ S+ L Sbjct: 22 VLFALIGLVIAAAGGAAAWYFLLRHEGPAAA-HAAPQSLATPVFFPLESMTVNLQSDDGL 80 Query: 62 QAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 Y + L+ + D + Y + LS D + L +++ Sbjct: 81 H-YLRIGLTLKLTDPTAQDYLTHHMPEIRSRILLALSNKHPEDLATLDGK--RQLADELR 137 Query: 119 EDLNSRLGSQ----FISEVLIDELN 139 + + VL + Sbjct: 138 TLIEQPTQPGNRSARVDAVLFTDFV 162 >gi|221214536|ref|ZP_03587506.1| flagellar basal body-associated protein FliL [Burkholderia multivorans CGD1] gi|221165426|gb|EED97902.1| flagellar basal body-associated protein FliL [Burkholderia multivorans CGD1] Length = 166 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 38/127 (29%), Gaps = 9/127 (7%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER 79 +F+ + P + + +++ S+ +Q Y V LS + D + + Sbjct: 40 MYVFMGRQGATHASAAEPAPLAAPVFFPLDPLTVNLQSDDGVQHYLRVGLSLKLTDPKAQ 99 Query: 80 SYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQ----FISE 132 L + LS D L ++++ + + + Sbjct: 100 EQLTARMPEIRSRVLLALSNKHPEDIATPDGK--QALAQQLRNLIEEPTQPGNQRTKVDD 157 Query: 133 VLIDELN 139 VL E Sbjct: 158 VLFTEFV 164 >gi|253702498|ref|YP_003023687.1| flagellar basal body-associated protein FliL [Geobacter sp. M21] gi|251777348|gb|ACT19929.1| flagellar basal body-associated protein FliL [Geobacter sp. M21] Length = 172 Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 19/117 (16%), Positives = 41/117 (35%), Gaps = 6/117 (5%) Query: 26 SMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI 85 A I E + ++ +G Y VK+ F + + Q + L+ Sbjct: 57 GGGHGAPAKEGEGAAAGATIYPMEPFIV-NIYDGAELRYLKVKVEFEMANPQVKPELEAK 115 Query: 86 ---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 D + LL+ M + ++ LR++I ++ + I++V + Sbjct: 116 MAPLRDAILILLTTKTMQEIQDLQGKN--QLREQILAAVSKVVPPSKITKVYFTDFV 170 >gi|317492414|ref|ZP_07950843.1| flagellar basal body-associated protein FliL [Enterobacteriaceae bacterium 9_2_54FAA] gi|316919753|gb|EFV41083.1| flagellar basal body-associated protein FliL [Enterobacteriaceae bacterium 9_2_54FAA] Length = 159 Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 15/142 (10%), Positives = 41/142 (28%), Gaps = 6/142 (4%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL- 61 K+++ + + + + + P + + ++ +S+G Sbjct: 15 KWVWILLILIIAGAGGGFYGWKYYQQQESLTESKPTPPPMPVFMPLDTFTVNLISDGEDA 74 Query: 62 QAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQ--IKAFGFDNLRKK 116 + L+ + D + + L LLS K +++ Sbjct: 75 DRVLYIGLTLRLPDEATRKRMNDYLPEMRSRLLMLLSRQHAATLASEQGKTQLMSDIKTV 134 Query: 117 IKEDLNSRLGSQFISEVLIDEL 138 + + Q +S+VL Sbjct: 135 LMPPIAPGQPKQIVSDVLFTAF 156 >gi|325527236|gb|EGD04618.1| flagellar basal body-associated protein FliL [Burkholderia sp. TJI49] Length = 167 Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 16/127 (12%), Positives = 39/127 (30%), Gaps = 9/127 (7%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER 79 Y+ + + P + + +++ S+ +Q Y V LS + D + + Sbjct: 41 YVFLNKQGASHAGAPAEPPPLAAPVFFPLDPLTVNLQSDDGVQHYLRVGLSLKLTDPKAQ 100 Query: 80 SYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQ----FISE 132 L + LS + L +++++ + + + Sbjct: 101 EQLTARMPEIRSRILLALSNKHPEEIATPDGK--HALAQQLRDLIEQPTQPGNQRAKVDD 158 Query: 133 VLIDELN 139 VL E Sbjct: 159 VLFTEFV 165 >gi|54308122|ref|YP_129142.1| flagellar basal body-associated protein FliL [Photobacterium profundum SS9] gi|46912548|emb|CAG19340.1| hypothetical flagellar protein FliL [Photobacterium profundum SS9] Length = 164 Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 34/149 (22%), Gaps = 11/149 (7%) Query: 2 LKFLFSGIWISVVTLI-SFYMLFL-----RSMDTMVENHVPPLAIKNTNIIKSELVSIPS 55 L L + ++ + + L M N ++ + I + Sbjct: 14 LFILIALAVTLLIGAGVAAWFLMGDDTPESGMAATSANQQVSAVVEPAYYVIMPQPFIFN 73 Query: 56 VSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQI-KAFGF- 110 V VK+ +V N+ + L + Sbjct: 74 VVGDKRDRVVQVKVQLMVRGNNNEALAQQHIPLIESTLLQSFGAATVEQLRTPNGRIDLR 133 Query: 111 DNLRKKIKEDLNSRLGSQFISEVLIDELN 139 I+ + G Q + VL Sbjct: 134 KQALFAIQSSMEKISGQQVVDRVLFTGFV 162 >gi|291286232|ref|YP_003503048.1| flagellar basal body-associated protein FliL [Denitrovibrio acetiphilus DSM 12809] gi|290883392|gb|ADD67092.1| flagellar basal body-associated protein FliL [Denitrovibrio acetiphilus DSM 12809] Length = 177 Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 38/121 (31%), Gaps = 7/121 (5%) Query: 23 FLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL 82 + ++ E + ++ Y V L ++D+++ + Sbjct: 58 VQPAKKAAAPKKEVKEGGGIGSLYPLENFIVNM-ADTGGTRYLRVTLQLELDDTKKFAEA 116 Query: 83 ----KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 K D + T+L+ + + L++++ LNS + I + E Sbjct: 117 LDMRKPQLRDAILTVLASKRYEEVSSAQGKLI--LKQELLRRLNSLVTEGTIVNIYFTEF 174 Query: 139 N 139 Sbjct: 175 V 175 >gi|86750894|ref|YP_487390.1| flagellar basal body-associated protein FliL [Rhodopseudomonas palustris HaA2] gi|86573922|gb|ABD08479.1| Flagellar basal body-associated protein FliL [Rhodopseudomonas palustris HaA2] Length = 167 Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 40/127 (31%), Gaps = 6/127 (4%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ-AYFLVKLSFIV 73 + + D E+ +K ++ + + + + Y K+ + Sbjct: 39 GGGGAWFFMSKGHDAEKEHAEAAEKVKPPTFVEVPEIMVNLAGSPGERVQYLKAKIVLEL 98 Query: 74 NDSQERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFI 130 D + TD T L GD + G +++++ +N + + Sbjct: 99 KDEKLVEQIKPTMPRITDLFQTYLRELRSGDLN--GSVGMFRMKEELTRRVNVAIAPAQV 156 Query: 131 SEVLIDE 137 + VL E Sbjct: 157 TAVLFKE 163 >gi|114797942|ref|YP_758972.1| flagellar basal body-associated protein FliL [Hyphomonas neptunium ATCC 15444] gi|114738116|gb|ABI76241.1| flagellar basal body-associated protein FliL [Hyphomonas neptunium ATCC 15444] Length = 171 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 18/149 (12%), Positives = 46/149 (30%), Gaps = 19/149 (12%) Query: 6 FSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN--------------IIKSELV 51 +G+ I ++ + + + I+ + + Sbjct: 23 IAGLLIVAAASLASSFGLFYFLTPPAQTPAAACPPAGSETAAPAVAPLAQDQVYIEMKEI 82 Query: 52 SIPSVSNGVLQAYFLVKLSFIV--NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFG 109 I S Y + +S + +++ + + + D L + D + + Sbjct: 83 LITIGSAPA-DRYLKLNISIVTGKDNAAKVKQAEPMLIDAFNNYLRSIELKDLEEPGFY- 140 Query: 110 FDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 +LR+++ +GS + VLI E Sbjct: 141 -PHLREQLARRSELVVGSAASNGVLITEF 168 >gi|296186697|ref|ZP_06855099.1| flagellar basal body-associated protein FliL [Clostridium carboxidivorans P7] gi|296048734|gb|EFG88166.1| flagellar basal body-associated protein FliL [Clostridium carboxidivorans P7] Length = 174 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 20/162 (12%), Positives = 53/162 (32%), Gaps = 28/162 (17%) Query: 2 LKFLFSGIWISVVTLISFYMLF-LRSMDTMVENHVPPLAIKNTNIIK----------SEL 50 +KF+ G+ ++ Y + + D + P A++ E Sbjct: 13 IKFIAIGLVALIIVGAGGYFGYSKFAKDKGTQKTAAPAAVQTAQTTTQAKTTQNQSYLEQ 72 Query: 51 VS----------IPSVSNGVLQAYFLVKLSFIVNDSQERSYL----KEIATDYLYTLLSG 96 + + ++++ + Y K+ + + + K + D + +L Sbjct: 73 IVSEKNIGLDECLVNLADEDGKRYVKTKIFVGYDKNSKLETELTEKKPLIRDAVIAVLRS 132 Query: 97 PPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + D+L+ ++ + +N L I+ V +L Sbjct: 133 KKAAEI---TPKNMDSLKMELIQKINPLLKKGQINNVYFSDL 171 >gi|57168948|ref|ZP_00368077.1| probable flagellar protein Cj1408 [Campylobacter coli RM2228] gi|305431536|ref|ZP_07400710.1| flagellar basal body-associated protein FliL [Campylobacter coli JV20] gi|57019614|gb|EAL56303.1| probable flagellar protein Cj1408 [Campylobacter coli RM2228] gi|304445343|gb|EFM37982.1| flagellar basal body-associated protein FliL [Campylobacter coli JV20] Length = 178 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 15/117 (12%), Positives = 33/117 (28%), Gaps = 7/117 (5%) Query: 26 SMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK-- 83 + T A + ++ +S+ Y + N + L Sbjct: 64 AKVTAPAQRGSDFANIGPMY-PLDPFTLNLLSD-SGSRYVKCTIELEQNTELLKPELDKK 121 Query: 84 -EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + D + L+ + K + L+ ++ +N L FI V + Sbjct: 122 VAVIRDIIIRTLTAKTFEEVSTQKGK--ERLKDELVGKINEILTDGFIKNVYFTDFV 176 >gi|310816834|ref|YP_003964798.1| flagellar motor protein MotA [Ketogulonicigenium vulgare Y25] gi|308755569|gb|ADO43498.1| flagellar motor protein MotA [Ketogulonicigenium vulgare Y25] Length = 146 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 9/144 (6%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSE-LVSIPSVSNG 59 M K L I V + + VP + + + +P + + Sbjct: 1 MKKILLP--MILTVIGTASGIGAGIITARPAVEAVPTIIPPTHTYVPLDEPFVVPILRDE 58 Query: 60 VLQAYFLVKLSFIVNDSQER--SYLKEIATDYLYTLLSGPPMG---DFVQIKAFGFDNLR 114 + +A + L ++ +Q + D +L D + LR Sbjct: 59 MTRAIVVAALGIEIDAAQASIVAPAMPKLRDQFLQVLYDHANTGGFDGLFTAPDVMRRLR 118 Query: 115 KKIKEDLNSRLGSQFISEVLIDEL 138 ++K LG+ + ++L+ +L Sbjct: 119 DRLKSAAVETLGNG-VHDILVTDL 141 >gi|83594173|ref|YP_427925.1| flagellar basal body-associated protein FliL [Rhodospirillum rubrum ATCC 11170] gi|83577087|gb|ABC23638.1| Flagellar basal body-associated protein FliL [Rhodospirillum rubrum ATCC 11170] Length = 196 Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 38/143 (26%), Gaps = 22/143 (15%) Query: 15 TLISFYMLFLRSMDTMVENHV-----------------PPLAIKNTNIIKSELVSIPSVS 57 + Y L T P + V + S Sbjct: 52 GVAGAYFAGLFDSSTPPTAEEGAAPPAGTPAAGEGEKGAPPVAAGPVFYDLDQVVVDLNS 111 Query: 58 NGVLQAYFLVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 +G ++Y ++LS + S D L + D G ++ Sbjct: 112 SGRRRSYLQLRLSLQLASSLDIPRVEEAMPRIMDTFIAFLRELRLEDLQ--GTAGMYRIQ 169 Query: 115 KKIKEDLNSRLGSQFISEVLIDE 137 +++ +N+ + +VL E Sbjct: 170 EELLIRVNAAAAPARVEDVLFKE 192 >gi|85859176|ref|YP_461378.1| flagellar basal body-associated protein [Syntrophus aciditrophicus SB] gi|85722267|gb|ABC77210.1| flagellar basal body-associated protein [Syntrophus aciditrophicus SB] Length = 164 Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 6/96 (6%) Query: 47 KSELVSIPSVSNGVLQAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFV 103 E + ++++ Y + V+D LK D + +LS + + Sbjct: 70 PMEPFVV-NLADSTGDRYLKAVIQIEVSDQENTAALDQLKPKFRDSILDILSSKSYKELM 128 Query: 104 QIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ LR+ I LNS L I V E Sbjct: 129 EVSGK--QRLREDIAFKLNSFLSKGRIMRVYFTEFV 162 >gi|88858102|ref|ZP_01132744.1| flagellar basal body-associated protein [Pseudoalteromonas tunicata D2] gi|88819719|gb|EAR29532.1| flagellar basal body-associated protein [Pseudoalteromonas tunicata D2] Length = 179 Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 12/160 (7%), Positives = 42/160 (26%), Gaps = 23/160 (14%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN----------------I 45 + F+ + + + + + E + A + Sbjct: 19 MLFIIIAVVVLIAGGGGAFFMMSGDDTPAQEETLAENASADGAKSEAADKSSAEMGSALY 78 Query: 46 IKSELVSIPSVSNGVLQAYFLVKLSFIVN---DSQERSYLKEIATDYLYTLLSGPPMGDF 102 + + +V +K+ +V + + + L ++ S + Sbjct: 79 VGMPRPFVFNVPGASRDRLVQIKVQLLVRGDVNEEAAKKHIPLIEGTLLSVFSTSNADEL 138 Query: 103 VQI---KAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + L+ +++ L G++ + +L Sbjct: 139 STSAGKETLRTKALKN-VQDTLTEIEGNKVVERILFTGFV 177 >gi|229591844|ref|YP_002873963.1| flagellar basal body-associated protein FliL [Pseudomonas fluorescens SBW25] gi|229363710|emb|CAY51097.1| flagellar basal body-associated protein FliL [Pseudomonas fluorescens SBW25] Length = 166 Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 12/135 (8%), Positives = 31/135 (22%), Gaps = 6/135 (4%) Query: 11 ISVVTLISFYMLF-LRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKL 69 ++ + + + + + + + Q Y V + Sbjct: 30 AIGASVGGTWYIMHSSASKPAPAAETASNVKQPAIFEPMLPAFVANFNQNGRQRYLQVSI 89 Query: 70 SFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF--DNLRKKIKEDLNSR 124 + + + + + L L SG + ++E Sbjct: 90 TLLARNQSDLDALKVHMPVIRNNLVMLFSGQSFDTLATPVGQEMLRQKVTASVQEVAQKE 149 Query: 125 LGSQFISEVLIDELN 139 LG I + L Sbjct: 150 LGKVVIEQALFTNFV 164 >gi|163750544|ref|ZP_02157782.1| flagellar basal body-associated protein [Shewanella benthica KT99] gi|161329699|gb|EDQ00688.1| flagellar basal body-associated protein [Shewanella benthica KT99] Length = 171 Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 15/146 (10%), Positives = 41/146 (28%), Gaps = 14/146 (9%) Query: 6 FSGIWISVVTLISFYMLFLRSMD-----TMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 G+ + ++ + S + + + + + ++ Sbjct: 26 VIGLVLVLIIAAVLWFFLGASSANSENTDAAADTQESMHVGEAFYVGMPRPFLFNLPGAT 85 Query: 61 LQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK-- 115 +K+ +V +D + D L T S + + +R+ Sbjct: 86 RSRLVEIKVQLMVRGADDGVLIRKHIPLIEDALLTTFSSADVQKLTSLAGKD--EMRQLA 143 Query: 116 --KIKEDLNSRLGSQFISEVLIDELN 139 ++ L S G + + +VL Sbjct: 144 LLNVQNTLQSVTGRKIVEKVLFTGFV 169 >gi|331016995|gb|EGH97051.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 167 Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 37/149 (24%), Gaps = 11/149 (7%) Query: 2 LKFLFSGIWISVVT----LISFYMLF-LRSMDTMVENHVPPLAIKNTN-IIKSELVSIPS 55 LK + + ++ + + + L +K + + Sbjct: 17 LKLIIIAVVALLLAVGLSVGATWFLMHKSESAPDPAAVATAANVKPVAVFEPMTPAFVVN 76 Query: 56 VSNGVLQAYFLVKLSF---IVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF-- 110 + Q Y V ++ D + + + L L + P Sbjct: 77 FNANGRQRYMQVSITMLGRNAADMEALKVHMPLIRNNLVMLFAAIPFESLASPIGQEMLR 136 Query: 111 DNLRKKIKEDLNSRLGSQFISEVLIDELN 139 I+E LG I ++L Sbjct: 137 QKATASIQEVAQKELGKTVIEQLLFTNFV 165 >gi|222823312|ref|YP_002574885.1| flagellar basal body-associated protein FliL [Campylobacter lari RM2100] gi|222538533|gb|ACM63634.1| flagellar basal body-associated protein FliL [Campylobacter lari RM2100] Length = 183 Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 29/96 (30%), Gaps = 6/96 (6%) Query: 47 KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFV 103 ++ +S+G Y + N L I D + L+ + Sbjct: 89 PLAPFTLNLLSDGG-ARYVKCTIQLEQNVETLTPELDKKSAIIRDIIIRTLTSKTFEEVS 147 Query: 104 QIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 K + L+ ++ +N L FI + + Sbjct: 148 TTKGK--ERLKDELTGKINEVLTDGFIKNIYFTDFV 181 >gi|239997090|ref|ZP_04717614.1| flagellar basal body-associated protein FliL [Alteromonas macleodii ATCC 27126] Length = 179 Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 18/162 (11%), Positives = 43/162 (26%), Gaps = 25/162 (15%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVP----------------PLAIKNTN 44 M+ + + + ++++LF + E + Sbjct: 18 MMLIIIIAVVLLGGGAAAYFLLFAGGDEPAAEQLAETDAAAAAASAPASAAGKAEMGTAL 77 Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGD 101 + + +V +K+ +V ++ + + L S D Sbjct: 78 YVAMPRPFVFNVPGAGRDRLVQIKVQLLVRGSDNEELAKTHIPLIEGTLLQAFSTSNADD 137 Query: 102 FVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEVLIDELN 139 V LR++ ++ L GS + VL Sbjct: 138 LVTEAGK--IELREQAVTEVQKALKDITGSDVVERVLFTGFV 177 >gi|78064702|ref|YP_367471.1| flagellar basal body-associated protein FliL [Burkholderia sp. 383] gi|77965447|gb|ABB06827.1| Flagellar basal body-associated protein FliL [Burkholderia sp. 383] Length = 178 Score = 58.1 bits (139), Expect = 5e-07, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 33/103 (32%), Gaps = 9/103 (8%) Query: 44 NIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMG 100 + +++ S+ Q Y V LS + D + + L + LS Sbjct: 76 VFFPLDPLTVNLQSDDGAQHYLRVGLSLKLTDPKAQEQLTARMPEIRSRILLALSNKHPE 135 Query: 101 DFVQIKAFGFDNLRKKIKEDLNSRLGSQ----FISEVLIDELN 139 D +L K+++E + + +VL E Sbjct: 136 DLATPDGK--RSLAKELRELIEQPTQPGNQRAKVDDVLFTEFV 176 >gi|39936959|ref|NP_949235.1| flagellar basal body-associated protein FliL [Rhodopseudomonas palustris CGA009] gi|192292787|ref|YP_001993392.1| flagellar basal body-associated protein FliL [Rhodopseudomonas palustris TIE-1] gi|39650816|emb|CAE29339.1| Flagellar basal body-associated protein FliL [Rhodopseudomonas palustris CGA009] gi|192286536|gb|ACF02917.1| flagellar basal body-associated protein FliL [Rhodopseudomonas palustris TIE-1] Length = 166 Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 20/122 (16%), Positives = 36/122 (29%), Gaps = 6/122 (4%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS-NGVLQAYFLVKLSFIVNDSQE 78 Y +K N ++ + + G Y K+ V D + Sbjct: 43 YFFLFAGHGEDAHQAEAAKEVKPPNFVEVPEIMVNLAGTPGERVQYLKAKVVLEVKDEKL 102 Query: 79 RS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLI 135 TD T L GD + G +++++ +N + +S VL Sbjct: 103 AEQIKPNMPRITDLFQTYLRELRSGDLN--GSVGMFRMKEELTRRVNMAIAPAQVSAVLF 160 Query: 136 DE 137 E Sbjct: 161 KE 162 >gi|332140588|ref|YP_004426326.1| flagellar basal body-associated protein FliL [Alteromonas macleodii str. 'Deep ecotype'] gi|327550610|gb|AEA97328.1| flagellar basal body-associated protein FliL [Alteromonas macleodii str. 'Deep ecotype'] Length = 179 Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 16/160 (10%), Positives = 42/160 (26%), Gaps = 21/160 (13%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVEN----------------HVPPLAIKNTN 44 M+ + + + ++++LF + E + Sbjct: 18 MMLIIIIAVVLVGGGAAAYFLLFAGGDEPAAEQLAETDAAAAAATAPAAGPGNAEMGTAL 77 Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGD 101 + + +V +K+ +V ++ + + L S D Sbjct: 78 YVAMPRPFVFNVPGSGRDRLVQIKVQLLVRGSDNEELAKTHIPLIEGTLLQAFSTSNADD 137 Query: 102 F--VQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 K + ++++ L GS + VL Sbjct: 138 LVTEAGKIELREQAVSEVQKALKDITGSDVVERVLFTGFV 177 >gi|163781855|ref|ZP_02176855.1| flagellar biosynthesis FliL [Hydrogenivirga sp. 128-5-R1-1] gi|159883075|gb|EDP76579.1| flagellar biosynthesis FliL [Hydrogenivirga sp. 128-5-R1-1] Length = 168 Score = 57.8 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 38/122 (31%), Gaps = 5/122 (4%) Query: 21 MLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER- 79 + K E I ++++ L Y V ++ ++ + Sbjct: 45 FAKKDEEKKEETPKPKVSPEAVGVMYKLEPAFIVNLADPELTMYARVSITLELSSPEVVM 104 Query: 80 --SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 + I D + +LS + + + L+ ++ + +N+ L + + E Sbjct: 105 EVQKREPIIRDAIIEILSNKTSRELRSPEGR--EQLKLELIKRINTILVQGGVRNIYFTE 162 Query: 138 LN 139 Sbjct: 163 FV 164 >gi|322379504|ref|ZP_08053869.1| Flagellar biosynthesis protein [Helicobacter suis HS1] gi|322380300|ref|ZP_08054516.1| flagellar basal body-associated protein FliL [Helicobacter suis HS5] gi|321147283|gb|EFX41967.1| flagellar basal body-associated protein FliL [Helicobacter suis HS5] gi|321148059|gb|EFX42594.1| Flagellar biosynthesis protein [Helicobacter suis HS1] Length = 185 Score = 57.8 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 17/101 (16%), Positives = 39/101 (38%), Gaps = 6/101 (5%) Query: 42 NTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPP 98 S+ + ++ + Y +S ++D + +K D + +LS Sbjct: 86 GPLYPLSDPFVVNLIAQ-NGRRYLKTSISLELSDPKLVEEVKVKETAIKDTIIEILSSKS 144 Query: 99 MGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + + +K L+++I+ ++NS L FI V + Sbjct: 145 IEEISTLKGKN--KLKEEIRSNINSFLIDGFIKNVFFTDFV 183 >gi|312884905|ref|ZP_07744595.1| flagellar basal body-associated protein FliL [Vibrio caribbenthicus ATCC BAA-2122] gi|309367382|gb|EFP94944.1| flagellar basal body-associated protein FliL [Vibrio caribbenthicus ATCC BAA-2122] Length = 161 Score = 57.4 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 36/126 (28%), Gaps = 6/126 (4%) Query: 20 YMLFLRSMDTMVENHVPP-LAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV---ND 75 + L E P + I + +V++ +K ++ + Sbjct: 34 FFLMGSGDTKEEEVVSQPVATAEPVVYIALSQAFVFNVNSKTKNRIARIKAQLMLRGAKN 93 Query: 76 SQERSYLKEIATDYLYTLLSGPPMGDFV--QIKAFGFDNLRKKIKEDLNSRLGSQFISEV 133 + + + LS + + D + + +K LN +G I V Sbjct: 94 EELARSHMPLIESTMLISLSVATVEQLRTVNGRGELRDKITEDVKTALNKAIGEPVIERV 153 Query: 134 LIDELN 139 L + Sbjct: 154 LFTDFV 159 >gi|39995528|ref|NP_951479.1| flagellar protein FliL [Geobacter sulfurreducens PCA] gi|39982291|gb|AAR33752.1| flagellar protein FliL [Geobacter sulfurreducens PCA] gi|298504528|gb|ADI83251.1| flagellar basal body-associated protein FliL [Geobacter sulfurreducens KN400] Length = 173 Score = 57.4 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 35/95 (36%), Gaps = 6/95 (6%) Query: 48 SELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQ 104 E + ++ +G Y VK+ F ++ ++ D + LL+ + D Sbjct: 80 LEPFIV-NIYDGQELRYLRVKVEFETATPDAKAEIESRQAPLRDAILVLLTTKTLQDIQD 138 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ LR +I N L +++V + Sbjct: 139 LQGKN--QLRDEILVAANKILPPGKVTKVYFTDFV 171 >gi|51246519|ref|YP_066403.1| flagellar protein (FliL) [Desulfotalea psychrophila LSv54] gi|50877556|emb|CAG37396.1| related to flagellar protein (FliL) [Desulfotalea psychrophila LSv54] Length = 162 Score = 57.4 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 17/144 (11%), Positives = 44/144 (30%), Gaps = 10/144 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVS-----IPSVSN 58 FL GI + + LI L + + + + N + + ++ + Sbjct: 19 FLIGGIALVAIILIGIIAYLLLNKGDDTQVTDKNVPVPQVNATNLGPMVDLQDFVVNIIS 78 Query: 59 GVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 Y ++ V++S + D + + + ++ L+ Sbjct: 79 DEENHYVKTAITLEVSNSSASEEVGMRMPQMRDTIILIFGNKDYRELQDLQGK--KQLKA 136 Query: 116 KIKEDLNSRLGSQFISEVLIDELN 139 +I +N+ L + + V Sbjct: 137 EISSRINAILQTGQVVAVYFTAFV 160 >gi|251772435|gb|EES53002.1| flagellar basal body-associated protein FliL [Leptospirillum ferrodiazotrophum] Length = 168 Score = 57.4 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 19/111 (17%), Positives = 36/111 (32%), Gaps = 6/111 (5%) Query: 33 NHVPPLAIKNTNIIKSELVSIPSVS-NGVLQAYFLVKLSFIVNDS---QERSYLKEIATD 88 IK I+ + + G Y V+++ ++ + +E Y Sbjct: 58 PKEMEKMIKEHPIVDLKPFVVNLSGPQGAAPQYLKVRIALKLDKALTAKEIEYRLPEIQS 117 Query: 89 YLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + LL L+ I+ +NSRL S +++V E Sbjct: 118 AILILLGAQTADAIQTTGGKL--ALKDAIRHRVNSRLDSGKVTDVYFTEFV 166 >gi|209695734|ref|YP_002263664.1| flagellar basal body-associated protein FliL [Aliivibrio salmonicida LFI1238] gi|208009687|emb|CAQ79986.1| polar flagellar protein FliL [Aliivibrio salmonicida LFI1238] Length = 161 Score = 57.4 bits (137), Expect = 8e-07, Method: Composition-based stats. Identities = 10/125 (8%), Positives = 33/125 (26%), Gaps = 5/125 (4%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV---NDS 76 +M + + A + I +V+ +K+ ++ ++ Sbjct: 35 FMSGESKPEPTEHDIAALEAKMPALYLNLPQPFIFNVAGDKRDRLVQLKVQVMMRGSDNE 94 Query: 77 QERSYLKEIATDYLYTLLSGPPMGDFVQI-KAFGF-DNLRKKIKEDLNSRLGSQFISEVL 134 + L + + + + + + I++ I +VL Sbjct: 95 AIAKQHTPLVESTLLSTFAAATVEQLREPRGRIELREQATRDIQDAFTKITAKPVIEKVL 154 Query: 135 IDELN 139 + Sbjct: 155 FTDFV 159 >gi|46201207|ref|ZP_00055553.2| COG1580: Flagellar basal body-associated protein [Magnetospirillum magnetotacticum MS-1] Length = 181 Score = 57.0 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 20/149 (13%), Positives = 47/149 (31%), Gaps = 15/149 (10%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNT----------NIIKSELV 51 + + I + V Y L T ++ P A + + + Sbjct: 31 ILMIVLPILLLVGAGAGVYFSGLLDKLTGKKDEHAPAAEAAPPPPPKAVQAASFMDLPEM 90 Query: 52 SIPSVSNGVLQAYFLVKLSFIVN---DSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAF 108 + + G QA+ ++++ + D + D L + D Sbjct: 91 LVNLQTTGRKQAFLKLRVALELEAVTDQPRVEQMLPRIIDNFQIYLRELRVEDLQGASGM 150 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 LR+++ +N+ + +++VL E Sbjct: 151 HL--LREELLTRVNAAVKPVKVNDVLFKE 177 >gi|171316891|ref|ZP_02906100.1| flagellar basal body-associated protein FliL [Burkholderia ambifaria MEX-5] gi|171097972|gb|EDT42790.1| flagellar basal body-associated protein FliL [Burkholderia ambifaria MEX-5] Length = 178 Score = 57.0 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 19/106 (17%), Positives = 37/106 (34%), Gaps = 15/106 (14%) Query: 44 NIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMG 100 + +++ S+ +Q Y V LS + D + + L + LS Sbjct: 76 VFFPLDPLTVNLQSDDGMQHYLRVGLSLKLTDPKAQEQLTARMPEIRSRILLALSNKHPE 135 Query: 101 DFVQIKAFGFDNLRKKIKEDL-------NSRLGSQFISEVLIDELN 139 D + +L K+++E + N R + +VL E Sbjct: 136 DLATPEGK--RSLAKELRELIAQPTQPGNQRA---KVDDVLFTEFV 176 >gi|157961195|ref|YP_001501229.1| flagellar basal body-associated protein FliL [Shewanella pealeana ATCC 700345] gi|157846195|gb|ABV86694.1| flagellar basal body-associated protein FliL [Shewanella pealeana ATCC 700345] Length = 172 Score = 57.0 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 37/141 (26%), Gaps = 5/141 (3%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 L I ++ L+ + + + ++S+ Sbjct: 30 VLLIAIVLTAWMLLGSEPVSESGSAAEGAVTEQAVRTGEAYYAAMPRPFLFNLSDNGRTR 89 Query: 64 YFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFG-FDNL-RKKIK 118 +K+ +V +D + D L T SG + L + ++ Sbjct: 90 LVEIKVQLMVRGNDDDTLIRKHIPLIEDALLTTFSGSDVQKLTSPAGKDELRQLALRNVQ 149 Query: 119 EDLNSRLGSQFISEVLIDELN 139 L G + +VL Sbjct: 150 NTLQPVTGRTVVEKVLFTGFV 170 >gi|320354328|ref|YP_004195667.1| flagellar basal body-associated protein FliL [Desulfobulbus propionicus DSM 2032] gi|320122830|gb|ADW18376.1| flagellar basal body-associated protein FliL [Desulfobulbus propionicus DSM 2032] Length = 172 Score = 57.0 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 13/119 (10%), Positives = 40/119 (33%), Gaps = 8/119 (6%) Query: 24 LRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL- 82 + +++ I +++ + + +S Y LS ++ + Sbjct: 57 ASKAEALIKPVPEEAKIGP--MVEIKEFIVNIISEDTPH-YVKASLSLELDKDATLDEVN 113 Query: 83 --KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 D + L+ + I+ ++ ++K +NS L + ++ V + + Sbjct: 114 KRMPQIRDAILLLIGNKTFEELQDIQGKN--QVKAELKSKINSFLKTGKVNNVYLTDFV 170 >gi|157376192|ref|YP_001474792.1| flagellar basal body-associated protein FliL [Shewanella sediminis HAW-EB3] gi|157318566|gb|ABV37664.1| flagellar basal body-associated protein FliL [Shewanella sediminis HAW-EB3] Length = 173 Score = 57.0 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 16/154 (10%), Positives = 42/154 (27%), Gaps = 19/154 (12%) Query: 3 KFLF---SGIWISVVTLISFYMLFLRSM-------DTMVENHVPPLAIKNTNIIKSELVS 52 K + G+ + ++ + S + + P+ + Sbjct: 20 KLVIFGAIGLVLVLLIGGGLWFFLGSSDTAETVDTEEVATETGEPVNSGEAYYVGMPRPF 79 Query: 53 IPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFG 109 + ++ +K+ +V D + D L T S + + Sbjct: 80 LFNLPGANRSRLVEIKVQLMVRGSEDDLLIKKHIPLIEDALLTTFSSADVQKLSSLAGKD 139 Query: 110 FDNLRK----KIKEDLNSRLGSQFISEVLIDELN 139 +R+ ++ L G + + +VL Sbjct: 140 --EMRQMALLNVQNTLQPVTGRKVVEKVLFTGFV 171 >gi|330831587|ref|YP_004394539.1| flagellar basal body-associated protein FliL [Aeromonas veronii B565] gi|328806723|gb|AEB51922.1| Flagellar basal body-associated protein FliL [Aeromonas veronii B565] Length = 144 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 17/147 (11%), Positives = 41/147 (27%), Gaps = 15/147 (10%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGV 60 K L + + D A + + + +S+ Sbjct: 4 FKILLVLLLSC-----GALQQQALAEDEPPAEGAEGAAKPGFSYHALDPDIITNYLSDSK 58 Query: 61 LQAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 Y V + + + + + D + L+ + + LRK+ Sbjct: 59 TLGYIRVTVELMAENEADLKLLEQHDPLIRDAIIRLIGSKNADQVKSLT--NREELRKEC 116 Query: 118 KEDLNSRL----GSQFISEVLIDELNY 140 + +N L G + + E++ + Y Sbjct: 117 ETTVNELLVKETGKKAVRELIFTKFLY 143 >gi|78777038|ref|YP_393353.1| flagellar basal body-associated protein FliL [Sulfurimonas denitrificans DSM 1251] gi|78497578|gb|ABB44118.1| Flagellar basal body-associated protein FliL [Sulfurimonas denitrificans DSM 1251] Length = 187 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 35/96 (36%), Gaps = 6/96 (6%) Query: 47 KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFV 103 + ++ ++ + + Y +S +N + L + D + +L+ + + Sbjct: 93 PLDTFTV-NLKSDAGRRYLKTTISLELNGKELSMELDSKAPVIRDRIIRILTSKTLEEIS 151 Query: 104 QIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 K + ++I + LNS + I + E Sbjct: 152 SKKGK--QKISEQIMDTLNSMISDGSIKGIYFTEFV 185 >gi|186477684|ref|YP_001859154.1| flagellar basal body-associated protein FliL [Burkholderia phymatum STM815] gi|184194143|gb|ACC72108.1| flagellar basal body-associated protein FliL [Burkholderia phymatum STM815] Length = 167 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 32/100 (32%), Gaps = 5/100 (5%) Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGPPMGD 101 E +++ S+ Q Y + L+ + D + + + LS D Sbjct: 66 FFPLESMTVNLQSDDGQQHYLRIGLTLKLTDQKVQEHLTEHMPEIRSRVLLALSNKHPED 125 Query: 102 FVQIK-AFGFDNLRKKIKEDLNSRLGSQF-ISEVLIDELN 139 + +K+ E+ G +S+VL E Sbjct: 126 LATLDGKKALAAELEKLIEEPTEANGQPVHVSDVLFTEFV 165 >gi|114777573|ref|ZP_01452554.1| flagellar protein FliL [Mariprofundus ferrooxydans PV-1] gi|114552044|gb|EAU54561.1| flagellar protein FliL [Mariprofundus ferrooxydans PV-1] Length = 173 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 13/110 (11%), Positives = 38/110 (34%), Gaps = 6/110 (5%) Query: 33 NHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKE---IATDY 89 +I + +++ ++++ + K+ V + + + E D Sbjct: 65 PEAEDENTGPPIMIDIDDITV-NLADADESRFLRAKIKLEVRNDDAKVKVTENMVKVNDL 123 Query: 90 LYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + T+L+ D + L++ + LN +G + I + + Sbjct: 124 IITVLASKKFSDIRTPQGK--YALKEDLVYRLNRIVGGKPIKNLYFTDFV 171 >gi|254470097|ref|ZP_05083501.1| flagellar basal body-associated protein FliL [Pseudovibrio sp. JE062] gi|211960408|gb|EEA95604.1| flagellar basal body-associated protein FliL [Pseudovibrio sp. JE062] Length = 165 Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 44/141 (31%), Gaps = 11/141 (7%) Query: 6 FSGIWISVVTLISFYML-----FLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 +G+ + + + Y++ + + V + K +++ + G Sbjct: 25 IAGVLLLTLGVGGAYVMDWINLGDTATVKRADGTVEQIETKPVVFYDLPEMTVNLSTQGR 84 Query: 61 LQAYFLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 Y V+++ V D L D + G L++++ Sbjct: 85 TT-YLKVRIALEVESDSMVSQVEPYLPRILDAFQIYLRELRPADLE--GSAGLFRLKEQL 141 Query: 118 KEDLNSRLGSQFISEVLIDEL 138 +NS + + VL E+ Sbjct: 142 LRRINSAIYPAKVEGVLFKEI 162 >gi|34558258|ref|NP_908073.1| flagellar basal body-associated protein FliL [Wolinella succinogenes DSM 1740] gi|34483977|emb|CAE10973.1| HYPOTHETICAL PROTEIN-Flagellar basal body associated protein [Wolinella succinogenes] Length = 178 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 17/160 (10%), Positives = 55/160 (34%), Gaps = 24/160 (15%) Query: 2 LKFLFSGIWISVVTLISF--YMLFLRSMDTMVENHVPPLAIKNT------------NIIK 47 + F+ +G+ ++ + Y + + + + + N + Sbjct: 19 IIFIIAGVIALLLIIGGVVVYFMLSSNPEPQAASAQASQSTSGGAKAGGASRSGGGNFLS 78 Query: 48 SELV-----SIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPM 99 + I +++ + Y ++ ++ + L + + D + ++LS + Sbjct: 79 VGPMYALDQFIVNLTTQSGRRYLKTSINVELSQPNLTAELDTKRAVIRDTVISILSSKSI 138 Query: 100 GDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + +K + L++++ E LN L I + + Sbjct: 139 EEISTMKGK--EKLKEELIERLNEFLVDGRIVNLFFTDFV 176 >gi|299131783|ref|ZP_07024978.1| flagellar basal body-associated protein FliL [Afipia sp. 1NLS2] gi|298591920|gb|EFI52120.1| flagellar basal body-associated protein FliL [Afipia sp. 1NLS2] Length = 166 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 47/140 (33%), Gaps = 7/140 (5%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + + + +++ + +FLR A + V + SN Sbjct: 26 IFMIAGAVVLTLAVSALGWYVFLRGGHDGQHAKEEAKA-APPVFLDVPDVLVNLASNPGE 84 Query: 62 Q-AYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + Y VK + ++ TD T L D + G +++++ Sbjct: 85 RIQYLKVKAVLELKEAPLVEKVKPAMPRVTDLFQTYLRELRANDLN--GSIGLFRMKEEL 142 Query: 118 KEDLNSRLGSQFISEVLIDE 137 + +N+ + + ++ VL E Sbjct: 143 TKRVNAAIAPEHVNAVLFKE 162 >gi|331269326|ref|YP_004395818.1| flagellar protein FliL [Clostridium botulinum BKT015925] gi|329125876|gb|AEB75821.1| flagellar protein FliL [Clostridium botulinum BKT015925] Length = 163 Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 21/134 (15%), Positives = 46/134 (34%), Gaps = 13/134 (9%) Query: 16 LISFYMLFLRSMDTMVENHVPPLAI----KNTNIIKSELVSIPSVSNGVLQAYFLVKLSF 71 + +L + ++ L++ N + + S+ Y K+S Sbjct: 29 GGGTFAGYLVASKNKPQSSAANLSVIQNTLNQKTFALDEFLVNLKSDDGSNRYLKTKVSV 88 Query: 72 IVNDSQERSYLKEIA-------TDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSR 124 D +E + L++ D + +L DF + + ++++IK +N Sbjct: 89 GYADIKENAKLQDELTTKKAIARDAINAILRSKKKEDFA--TSAQVEKIKEEIKSKVNPL 146 Query: 125 LGSQFISEVLIDEL 138 L I V E+ Sbjct: 147 LQDGQIINVYFSEI 160 >gi|149188091|ref|ZP_01866386.1| flagellar basal body-associated protein FliL [Vibrio shilonii AK1] gi|148838079|gb|EDL55021.1| flagellar basal body-associated protein FliL [Vibrio shilonii AK1] Length = 164 Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats. Identities = 10/106 (9%), Positives = 30/106 (28%), Gaps = 5/106 (4%) Query: 39 AIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLS 95 + + + I + + +K +V ++ + Y + L + + Sbjct: 57 PVDPISYVNIAQPFIFNAAGKQRDRVVQIKAQLMVRGLDNEEVARYHSPLIESTLLSTFA 116 Query: 96 GPPMGDFVQIK-AFGF-DNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + D ++ L+ +G + VL + Sbjct: 117 SATVEQLRSTNGRVELRDQATADVQASLSQVVGKPVVERVLFTDFV 162 >gi|121997290|ref|YP_001002077.1| flagellar basal body-associated protein FliL [Halorhodospira halophila SL1] gi|121588695|gb|ABM61275.1| flagellar basal body-associated protein FliL [Halorhodospira halophila SL1] Length = 152 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 17/147 (11%), Positives = 40/147 (27%), Gaps = 14/147 (9%) Query: 2 LKFLFSGIWISVV--TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59 + + + T+ + ++ + + + +K E + G Sbjct: 9 IFMGIMALMMVATMGTVGALAFGYIT---PPGMHAEAEPDLGDPQYLKLEPPLTVNFERG 65 Query: 60 VLQAYFLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 +Y ++ + + + + L L S D G + LR Sbjct: 66 QRISYLQAEVEVMARADEPLSGVERHMPVIRNNLLMLFSDQSFEDLN--TRAGREELRHA 123 Query: 117 IKEDLNSRLGS----QFISEVLIDELN 139 E++N+ L I V Sbjct: 124 SLEEINNILDERGVDGEIEAVYFTSFV 150 >gi|24374734|ref|NP_718777.1| flagellar basal body-associated protein FliL [Shewanella oneidensis MR-1] gi|24349394|gb|AAN56221.1|AE015759_13 flagellar protein FliL [Shewanella oneidensis MR-1] Length = 174 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 43/151 (28%), Gaps = 17/151 (11%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLA--------IKNTNIIKSELVSIPS 55 F+ G+ +++ + + S D VE + + + Sbjct: 24 FIGVGVLAALLIGGALWFFLGSSDDAPVEAAEGVKTTAEAPAAEPALAAYVPMPRPFLFN 83 Query: 56 VSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDN 112 + +K+ +V +D + D L T SG + Sbjct: 84 LPGPDRARLVEIKVQLMVRGQDDEVLTQKHIPLIEDALLTTFSGADVQKLSTQAGKD--E 141 Query: 113 LRK----KIKEDLNSRLGSQFISEVLIDELN 139 LR+ ++ L G + + +VL Sbjct: 142 LRQLALLSVQNTLQPVTGRKVVEKVLFTGFV 172 >gi|114332021|ref|YP_748243.1| flagellar basal body-associated protein FliL [Nitrosomonas eutropha C91] gi|114309035|gb|ABI60278.1| flagellar basal body-associated protein FliL [Nitrosomonas eutropha C91] Length = 160 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 21/132 (15%), Positives = 41/132 (31%), Gaps = 10/132 (7%) Query: 14 VTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV 73 + + + K +K E ++ Y V+LS V Sbjct: 29 AGIGGTWYFMK-KQHEEAGSEAVVEKKKPAAFVKIESFTVNLQPEERESHYLQVELSLKV 87 Query: 74 NDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF- 129 N++ K + + LLS + + L + I + + S++GS+ Sbjct: 88 NETAVITVIENSKPEIRNQILLLLSSKKPSEINTLDGK--QKLSQDIIQAIRSKIGSEAL 145 Query: 130 ---ISEVLIDEL 138 I +VL Sbjct: 146 QNDILDVLFTSF 157 >gi|91776324|ref|YP_546080.1| flagellar basal body-associated protein FliL [Methylobacillus flagellatus KT] gi|91710311|gb|ABE50239.1| flagellar basal body-associated protein FliL [Methylobacillus flagellatus KT] Length = 168 Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 16/137 (11%), Positives = 39/137 (28%), Gaps = 10/137 (7%) Query: 10 WISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKL 69 + +++ L + + + K + + ++ ++ Y V L Sbjct: 33 VAVLGAGGAYWYLKQHDGNQQDKPREEKVVAKEPVFVTLDTFTV-NLQPDPDDQYLQVDL 91 Query: 70 SFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLG 126 + V D + + + LLS + + I L +I L+ Sbjct: 92 TVQVEDQAQADIIKKHMPSVRNRILILLSSKKSSELLNIDGK--KALASEIIAQLSEPFS 149 Query: 127 SQ----FISEVLIDELN 139 +S+V Sbjct: 150 PGAKPQAVSDVFFTSFV 166 >gi|330953757|gb|EGH54017.1| flagellar basal body-associated protein FliL [Pseudomonas syringae Cit 7] Length = 170 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 37/149 (24%), Gaps = 11/149 (7%) Query: 2 LKFLFSGIWISVVT----LISFYMLF--LRSMDTMVENHVPPLAIKNTNIIKSELVSIPS 55 LK + + ++ + + + L S + + + Sbjct: 20 LKLIIIAVVALLLAVGLSVGATWFLMHKSESKEDPAAAAAAANVKPVAVFEPMTPAFVVN 79 Query: 56 VSNGVLQAYFLVKLSF---IVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF-- 110 + Q Y V ++ D + + + L L + P Sbjct: 80 FNANGRQRYMQVSITMLGRNAADMEALKVHMPLIRNNLVMLFAAIPFESLASPIGQEMLR 139 Query: 111 DNLRKKIKEDLNSRLGSQFISEVLIDELN 139 I+E LG I ++L Sbjct: 140 QKATASIQEVAQKELGKTVIEQLLFTNFV 168 >gi|107021591|ref|YP_619918.1| flagellar basal body-associated protein FliL [Burkholderia cenocepacia AU 1054] gi|116688065|ref|YP_833688.1| flagellar basal body-associated protein FliL [Burkholderia cenocepacia HI2424] gi|170731415|ref|YP_001763362.1| flagellar basal body-associated protein FliL [Burkholderia cenocepacia MC0-3] gi|254246642|ref|ZP_04939963.1| Flagellar basal body-associated protein FliL [Burkholderia cenocepacia PC184] gi|105891780|gb|ABF74945.1| flagellar basal body-associated protein FliL [Burkholderia cenocepacia AU 1054] gi|116646154|gb|ABK06795.1| flagellar basal body-associated protein FliL [Burkholderia cenocepacia HI2424] gi|124871418|gb|EAY63134.1| Flagellar basal body-associated protein FliL [Burkholderia cenocepacia PC184] gi|169814657|gb|ACA89240.1| flagellar basal body-associated protein FliL [Burkholderia cenocepacia MC0-3] Length = 177 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 33/103 (32%), Gaps = 9/103 (8%) Query: 44 NIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMG 100 + +++ S+ Q Y V LS + D + + L + LS Sbjct: 75 VFFPLDPLTVNLQSDDGAQHYLRVGLSLKLTDPKAQEQLTARMPEIRSRILLALSNKHPE 134 Query: 101 DFVQIKAFGFDNLRKKIKEDLNSRLGSQ----FISEVLIDELN 139 + + +L +++E + + +VL E Sbjct: 135 ELATPEGK--RSLATELRELIEQPTQPGNQRAKVDDVLFTEFV 175 >gi|294679028|ref|YP_003579643.1| flagellar basal body-associated protein FliL [Rhodobacter capsulatus SB 1003] gi|294477848|gb|ADE87236.1| flagellar basal body-associated protein FliL-2 [Rhodobacter capsulatus SB 1003] Length = 184 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/105 (18%), Positives = 35/105 (33%), Gaps = 7/105 (6%) Query: 40 IKNTNIIKSE-LVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY--LKEIATDYLYTLLSG 96 + +K IP + G + + ++ LS V + D L +L Sbjct: 75 VPTIEYVKLNNQFVIPVIKKGAVASLVVLSLSLEVTVGSTEKVYAAEPKLRDVLLQVLFD 134 Query: 97 PPMG---DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + +LR+ + E S LG + VLI ++ Sbjct: 135 HANAGGFEGSFTDTANMTDLRRALTEASQSVLG-DLVLNVLISDI 178 >gi|86146130|ref|ZP_01064456.1| flagellar basal body-associated protein [Vibrio sp. MED222] gi|218708829|ref|YP_002416450.1| flagellar basal body-associated protein FliL [Vibrio splendidus LGP32] gi|85836077|gb|EAQ54209.1| flagellar basal body-associated protein [Vibrio sp. MED222] gi|218321848|emb|CAV17823.1| polar flagellar protein FliL [Vibrio splendidus LGP32] Length = 162 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 12/128 (9%), Positives = 31/128 (24%), Gaps = 8/128 (6%) Query: 20 YMLFLRSMDTMVENHVPP---LAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFI---V 73 + L + + + +V+ +K+ + + Sbjct: 33 FFLMGSDDKAEGAGSSAEVQLMGADPVVYVNVPQAFLFNVTGDKKDRLVQIKVQLMVRGM 92 Query: 74 NDSQERSYLKEIATDYLYTLLSGPPMGDFVQI-KAFGF-DNLRKKIKEDLNSRLGSQFIS 131 + Y + L + + + + IK L +G I Sbjct: 93 KNEVLARYHSPLVESALLATFASATVDQLRSPAGRVELRNKATEDIKASLTQAVGQPVIE 152 Query: 132 EVLIDELN 139 +VL + Sbjct: 153 KVLFTDFV 160 >gi|90411029|ref|ZP_01219043.1| flagellar basal body-associated protein [Photobacterium profundum 3TCK] gi|90328242|gb|EAS44553.1| flagellar basal body-associated protein [Photobacterium profundum 3TCK] Length = 164 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/148 (10%), Positives = 36/148 (24%), Gaps = 12/148 (8%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLA-------IKNTNIIKSELVSIPSV 56 F+ + ++++ + L +T A ++ + I +V Sbjct: 15 FILIALAVTLLIGAAVAAWLLMGDETPEPEMATTSANQQVSTVVEPAYYVIMPQPFIFNV 74 Query: 57 SNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIK-AFGF-D 111 VK+ +V N+ + L + Sbjct: 75 VGDKRDRVVQVKVQLMVRGNNNEALAQQHIPLIESTLLQSFGAATVEQLRTPNGRIDLRK 134 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDELN 139 I+ + G Q + VL Sbjct: 135 QALFAIQSSMEKISGQQVVDRVLFTGFV 162 >gi|138894750|ref|YP_001125203.1| flagellar basal body-associated protein FliL [Geobacillus thermodenitrificans NG80-2] gi|134266263|gb|ABO66458.1| Flagellar protein [Geobacillus thermodenitrificans NG80-2] Length = 142 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 19/141 (13%), Positives = 49/141 (34%), Gaps = 14/141 (9%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+ L + + ++ + M + P + I ++ ++++G Sbjct: 10 MVIMLAI-----IALAGTVALVMVMKMAGGEKQGEPSADELAESSIDIPEMTT-NLADG- 62 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 Y + + + + ++ D + LS DF G L++++ Sbjct: 63 --RYIKISFKIQTDSDKGKEEAEKRDFQIKDVIIERLSEMKAADFK--GKEGMTALKERL 118 Query: 118 KEDLNSRLGSQFISEVLIDEL 138 K+D+N+ + + V I Sbjct: 119 KQDINALMQEGKVENVYITSF 139 >gi|146307838|ref|YP_001188303.1| flagellar basal body-associated protein FliL [Pseudomonas mendocina ymp] gi|145576039|gb|ABP85571.1| flagellar basal body-associated protein FliL [Pseudomonas mendocina ymp] Length = 173 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 43/149 (28%), Gaps = 11/149 (7%) Query: 2 LKFLFSGIWISV-VTLISFYMLFLRSMDTMVENHVPPLAIKNTN-----IIKSELVSIPS 55 + + G+ ++V +++ + + + + + + Sbjct: 23 IILIVVGLLLAVGLSIGGTWFILSKGDKADDAKPAEAASPAVPVRQPALYQDLMPAFVVN 82 Query: 56 VSNGVLQAYFLVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQI--KAFGF 110 ++ Y V ++ + D+ + + + L LLSG K Sbjct: 83 FNHQGRTRYLQVSMALMSRDAAGVEKLKVHMPVLRNRLVMLLSGQDFAALQTPLGKEMLL 142 Query: 111 DNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++E GS + +VL Sbjct: 143 QQALASVQELAQKETGSTVVEQVLFTNFV 171 >gi|56419764|ref|YP_147082.1| flagellar basal body-associated protein FliL [Geobacillus kaustophilus HTA426] gi|261419429|ref|YP_003253111.1| flagellar basal body-associated protein FliL [Geobacillus sp. Y412MC61] gi|297530596|ref|YP_003671871.1| flagellar basal body-associated protein FliL [Geobacillus sp. C56-T3] gi|319766244|ref|YP_004131745.1| flagellar basal body-associated protein FliL [Geobacillus sp. Y412MC52] gi|56379606|dbj|BAD75514.1| flagellar basal body-associated protein [Geobacillus kaustophilus HTA426] gi|261375886|gb|ACX78629.1| flagellar basal body-associated protein FliL [Geobacillus sp. Y412MC61] gi|297253848|gb|ADI27294.1| flagellar basal body-associated protein FliL [Geobacillus sp. C56-T3] gi|317111110|gb|ADU93602.1| flagellar basal body-associated protein FliL [Geobacillus sp. Y412MC52] Length = 142 Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 43/138 (31%), Gaps = 11/138 (7%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 + I++ + + + P I ++ ++++G Sbjct: 10 MIIVLAVIALAGTAALVAVMKMGHA--EKQGAPSADELAERSIDIPEMTT-NLADG---R 63 Query: 64 YFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 Y + + Q + ++ D + LS DF G L++++K + Sbjct: 64 YIKISFKIETDSDQGKEEAEKRDFQMKDVIIEQLSQMKAADFK--GKEGLTALKERLKRE 121 Query: 121 LNSRLGSQFISEVLIDEL 138 +N + + V I Sbjct: 122 INGLMQEGRVENVYITSF 139 >gi|301165892|emb|CBW25465.1| putative flagellar protein [Bacteriovorax marinus SJ] Length = 188 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 11/119 (9%), Positives = 37/119 (31%), Gaps = 5/119 (4%) Query: 23 FLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL 82 + + ++ + + + + + + N Sbjct: 69 MKSAGAIDESSETGEAREEDGILFPLDNFTANLAQGDGPRRFVRLNAVLKFNRDSSEEEF 128 Query: 83 K---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 K D + ++L+ D ++++ + L++++K +NS L + +V Sbjct: 129 KARKPQIRDTIISILNSKRAEDLLKVEGKNY--LKEEVKAAINSFLVDGKVVDVFYVSF 185 >gi|283955024|ref|ZP_06372531.1| possible flagellar protein [Campylobacter jejuni subsp. jejuni 414] gi|283793522|gb|EFC32284.1| possible flagellar protein [Campylobacter jejuni subsp. jejuni 414] Length = 178 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 31/96 (32%), Gaps = 6/96 (6%) Query: 47 KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFV 103 + ++ +S+ Y + N + L + D + +L+ + Sbjct: 84 PLDPFTLNLLSD-SGSRYVKCTIELEQNSELLKPELDKKVSVIRDIIIRVLTAKTFEEVS 142 Query: 104 QIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 K + L+ ++ +N L FI + + Sbjct: 143 TQKGK--ERLKDELVGKINEILTDGFIKNIYFTDFV 176 >gi|256830499|ref|YP_003159227.1| flagellar basal body-associated protein FliL [Desulfomicrobium baculatum DSM 4028] gi|256579675|gb|ACU90811.1| flagellar basal body-associated protein FliL [Desulfomicrobium baculatum DSM 4028] Length = 171 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 6/109 (5%) Query: 34 HVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYL 90 ++ + + ++S+ + + Y L V + + L D L Sbjct: 64 EQKAEVEPGGQLVTLDSFVV-NLSDPMGRRYLKTTLDVEVASAAAAAELTAAMPKVKDTL 122 Query: 91 YTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 LLS D + L+ I LN +G + V E Sbjct: 123 LLLLSSKSFADISSMDKK--IELKNDIVSRLNQIIGKNKVRNVYFTEFV 169 >gi|237799244|ref|ZP_04587705.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. oryzae str. 1_6] gi|331022099|gb|EGI02156.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. oryzae str. 1_6] Length = 168 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/149 (12%), Positives = 38/149 (25%), Gaps = 11/149 (7%) Query: 2 LKFLFSGIWISVVT----LISFYMLF--LRSMDTMVENHVPPLAIKNTNIIKSELVSIPS 55 LK + + ++ + + + L S + A + + Sbjct: 18 LKLIIIAVVALLLAVGLSVGATWFLMHKSESKEDPAAAAAAANAKPVAVFEPMTPAFVVN 77 Query: 56 VSNGVLQAYFLVKLSF---IVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF-- 110 + Q Y V ++ D + + + L L + P Sbjct: 78 FNANGRQRYMQVSITMLGRNAADMEALKVHMPLIRNNLVMLFAAIPFESLASPIGQEMLR 137 Query: 111 DNLRKKIKEDLNSRLGSQFISEVLIDELN 139 I+E LG I ++L Sbjct: 138 QKATASIQEVAQKELGKTVIEQLLFTNFV 166 >gi|85711036|ref|ZP_01042096.1| flagellar basal body-associated protein [Idiomarina baltica OS145] gi|85694949|gb|EAQ32887.1| flagellar basal body-associated protein [Idiomarina baltica OS145] Length = 177 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 19/158 (12%), Positives = 47/158 (29%), Gaps = 23/158 (14%) Query: 3 KFLFSG---IWISVVTLISFYMLFLRSMDTMVEN-----------HVPPLAIKNTNIIKS 48 K+L G I + V+ +++ + L + + P + N + Sbjct: 20 KWLIIGAAAILLVVIIIVAVWFLMGTKQASSASDMGAGGGSSEEMTSEPAQVGNALYVGM 79 Query: 49 ELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQI 105 + V + + +V + + L+ + S + Sbjct: 80 PRPFVFIVPGDSRDRTVQINVQLMVRGERSEELTKQHIPLIEGTLHEVFSSSTADELRTA 139 Query: 106 KAFGFDNLRK----KIKEDLNSRLGSQFISEVLIDELN 139 + +R+ +++ L S G + +VL L Sbjct: 140 EGK--QRIRELALKQVRSALESVTGEGLVEKVLFTGLV 175 >gi|330889051|gb|EGH21712.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. mori str. 301020] Length = 166 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/149 (10%), Positives = 36/149 (24%), Gaps = 11/149 (7%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPP------LAIKNTNIIKSELVSIPS 55 LK + + ++ + M P + + Sbjct: 16 LKLIILAVVALLLGVGLSVGATWFLMHKSESTPDPAAAAAAANVKPVGVFEPMTPAFVVN 75 Query: 56 VSNGVLQAYFLVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF-- 110 ++ Q Y V ++ + ++ + + L L + P Sbjct: 76 FNSNGRQRYMQVSITMLARNAADMEALKAHMPLIRNNLVMLFAAIPFESLASPIGQEMLR 135 Query: 111 DNLRKKIKEDLNSRLGSQFISEVLIDELN 139 I+E LG I ++L Sbjct: 136 QKATASIQEVAQKELGKTVIEQLLFTNFV 164 >gi|295678043|ref|YP_003606567.1| flagellar basal body-associated protein FliL [Burkholderia sp. CCGE1002] gi|295437886|gb|ADG17056.1| flagellar basal body-associated protein FliL [Burkholderia sp. CCGE1002] Length = 166 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 37/126 (29%), Gaps = 5/126 (3%) Query: 19 FYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVND--- 75 + + V P E +++ S+ Q + + L+ + D Sbjct: 39 VWFFMSKRAPVAVSAEAAPALSAAPLFFPLESMTVNLQSDDGQQHFLRIGLTLKLGDAGT 98 Query: 76 SQERSYLKEIATDYLYTLLSGPPMGDFVQIK--AFGFDNLRKKIKEDLNSRLGSQFISEV 133 Q + + LS + ++ + L+ I E + + + +V Sbjct: 99 QQALTDHMPEVRSRILLALSNKHPEELAPLEGKRALAEELKTLITEPIERGVAPIRVQDV 158 Query: 134 LIDELN 139 L E Sbjct: 159 LFTEFV 164 >gi|254517013|ref|ZP_05129071.1| flagellar basal body-associated protein FliL [gamma proteobacterium NOR5-3] gi|219674518|gb|EED30886.1| flagellar basal body-associated protein FliL [gamma proteobacterium NOR5-3] Length = 171 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 18/135 (13%), Positives = 37/135 (27%), Gaps = 13/135 (9%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKN----TNIIKSELVSIPSVSNGVLQAYFLVKLS 70 + FL D ++ + E + + ++ +G Y ++ Sbjct: 38 GGGAGAFFFLSGGDEAEGEDAVEEVVEEAPKVPLYLDIEKLLV-NLEHGGRTRYVQAEMQ 96 Query: 71 FIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLG- 126 + + D L TL S I+ LR + +N LG Sbjct: 97 LMSYKQEAIDQAARDMPAIRDGLITLFSQQDFAALKTIEGKD--ALRADALKAVNRALGL 154 Query: 127 --SQFISEVLIDELN 139 I ++ + Sbjct: 155 TPPDAIEKIYFENFV 169 >gi|145301046|ref|YP_001143887.1| flagellar basal body-associated protein FliL [Aeromonas salmonicida subsp. salmonicida A449] gi|142853818|gb|ABO92139.1| putative flagellar basal body-associated protein FliL [Aeromonas salmonicida subsp. salmonicida A449] Length = 144 Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 14/109 (12%), Positives = 35/109 (32%), Gaps = 10/109 (9%) Query: 40 IKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLS 95 + + + +S+G Y V + + + + + D + L+ Sbjct: 37 KPGFSYHALDPDIITNYLSDGKTLGYIRVTVELMAENEGDLKLLEQHDPLIRDAIIRLMG 96 Query: 96 GPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEVLIDELNY 140 + + LRK+ +N L G + + E++ + Y Sbjct: 97 SKTADQIKSL--VNREELRKECLTQVNELLVKETGKKAVRELIFTKFLY 143 >gi|146282920|ref|YP_001173073.1| flagellar basal body-associated protein FliL [Pseudomonas stutzeri A1501] gi|145571125|gb|ABP80231.1| flagellar protein FliL [Pseudomonas stutzeri A1501] gi|327481260|gb|AEA84570.1| flagellar basal body-associated protein FliL [Pseudomonas stutzeri DSM 4166] Length = 177 Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 17/151 (11%), Positives = 38/151 (25%), Gaps = 13/151 (8%) Query: 2 LKFLFSGIWISVVTL-----ISFYMLFLRSMDTMVENHVPPLAIKNTN---IIKSELVSI 53 LK + + +V + + Y + + + + Sbjct: 25 LKLIILIVVAMLVAVGLSVGGTLYFMSKGDDLEGSKTQEAATTVSGKQPAIYEVLMPAFV 84 Query: 54 PSVSNGVLQAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF 110 + ++ Q Y V ++ + D + + L LLS Sbjct: 85 VNFNHKGRQRYMQVSIALMSRDQAALDALKVHMPLLRNRLVMLLSSQDFEALKTPVGKEM 144 Query: 111 --DNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++E +G I +VL Sbjct: 145 LRQQATASVQELAQKEIGKLAIEQVLFTNFV 175 >gi|307721362|ref|YP_003892502.1| flagellar basal body-associated protein FliL [Sulfurimonas autotrophica DSM 16294] gi|306979455|gb|ADN09490.1| flagellar basal body-associated protein FliL [Sulfurimonas autotrophica DSM 16294] Length = 184 Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 35/96 (36%), Gaps = 6/96 (6%) Query: 47 KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFV 103 + ++ ++ + + Y +S ++ + L + D + +LS + + Sbjct: 90 PLDTFTV-NLKSDAGRRYLKATMSLELDSPELSHELDSKAPVLRDRIIRILSSKTLEEIS 148 Query: 104 QIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 K + ++I + LNS + I + E Sbjct: 149 SKKGK--QKVSEQIMDILNSMITDGQIKGIYFTEFV 182 >gi|196247628|ref|ZP_03146330.1| flagellar basal body-associated protein FliL [Geobacillus sp. G11MC16] gi|196212412|gb|EDY07169.1| flagellar basal body-associated protein FliL [Geobacillus sp. G11MC16] Length = 142 Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 21/133 (15%), Positives = 47/133 (35%), Gaps = 8/133 (6%) Query: 9 IWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVK 68 I ++++ L L + T E P A + ++++G Y + Sbjct: 12 IMLAIIALAGTVALVMVMKMTGGEKQGEPSADELAESSIDIPEMTTNLADG---RYIKIS 68 Query: 69 LSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL 125 + + + ++ D + LS DF G L++++K+D+N+ + Sbjct: 69 FKIQTDSDKGKEEAEKRDFQIKDVIIERLSEMKAADFK--GKEGMAALKERLKQDINALM 126 Query: 126 GSQFISEVLIDEL 138 + V I Sbjct: 127 QEGKVENVYITSF 139 >gi|90579933|ref|ZP_01235741.1| flagellar basal body-associated protein [Vibrio angustum S14] gi|90438818|gb|EAS64001.1| flagellar basal body-associated protein [Vibrio angustum S14] Length = 160 Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 15/150 (10%), Positives = 34/150 (22%), Gaps = 14/150 (9%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENH---------VPPLAIKNTNIIKSELVSIP 54 L S + + V+ L DT P + + + Sbjct: 9 MLISAVAVIVILAAGIGFWLLNGDDTKESPQVAATVQESTASPAPVMSAYYVVLPQPFTF 68 Query: 55 SVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF- 110 +V+ +K+ +V + + L + Sbjct: 69 NVTGDTRDRVVQIKVQLMVRGDKNEALAKQHIPLIESTLLQAFGVATVEQLRSPNGRDQL 128 Query: 111 -DNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + +K + G+ + VL Sbjct: 129 RQQALEAVKATMVKVAGTPAVERVLFTGFV 158 >gi|330976005|gb|EGH76071.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. aptata str. DSM 50252] Length = 170 Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 36/149 (24%), Gaps = 11/149 (7%) Query: 2 LKFLFSGIWISVVT----LISFYMLF--LRSMDTMVENHVPPLAIKNTNIIKSELVSIPS 55 LK + + ++ + + + L S + + Sbjct: 20 LKLIIIAVVALLLAGGLSVGATWFLMHKSESKVDPAAAAAAANVKPVAVFEPMTPAFVVN 79 Query: 56 VSNGVLQAYFLVKLSF---IVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF-- 110 + Q Y V ++ D + + + L L + P Sbjct: 80 FNANGRQRYMQVSITMLGRNAADMEALKVHMPLIRNNLVMLFAAIPFESLASPIGQEMLR 139 Query: 111 DNLRKKIKEDLNSRLGSQFISEVLIDELN 139 I+E LG I ++L Sbjct: 140 QKATASIQEVAQKELGKTVIEQLLFTNFV 168 >gi|253996305|ref|YP_003048369.1| flagellar basal body-associated protein FliL [Methylotenera mobilis JLW8] gi|253982984|gb|ACT47842.1| flagellar basal body-associated protein FliL [Methylotenera mobilis JLW8] Length = 163 Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 12/143 (8%), Positives = 43/143 (30%), Gaps = 10/143 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 + + + +++ + + L + E K + + ++ ++ + Sbjct: 22 IIIAAVVLALGGGGAAWFLTQQKSHAKKEEVKKEEPAKAPVFLTLDTFTV-NLQPDPDEK 80 Query: 64 YFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 + V +S V ++ + L LL+ + ++ +L +I + Sbjct: 81 FLQVDISLQVASAEAAEAIKLHMPAVKNRLLLLLTSKSAAEISTVEGK--QDLSNEIIAE 138 Query: 121 LNSRLGSQF----ISEVLIDELN 139 + + +V Sbjct: 139 VKKPFAPNAKPQEVLDVFFTSFV 161 >gi|27380937|ref|NP_772466.1| flagellar basal body-associated protein FliL [Bradyrhizobium japonicum USDA 110] gi|27354103|dbj|BAC51091.1| flagellar synthesis protein [Bradyrhizobium japonicum USDA 110] Length = 166 Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 44/143 (30%), Gaps = 11/143 (7%) Query: 2 LKFLFSGIWISVVTLISF---YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS- 57 LK + + + V + F D K ++ + + Sbjct: 24 LKLIIMAVGLLAVLGGGAATWFFFFRHGDDEHHAEAA--PPPKPPAFVEVPDMMVNLAGA 81 Query: 58 NGVLQAYFLVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 G Y +K+ + + + TD T + D + G L+ Sbjct: 82 PGERVQYLKLKIVLELKEEKQIEAIKPAMPRVTDIFQTYVRELRSSDLN--GSAGIFRLK 139 Query: 115 KKIKEDLNSRLGSQFISEVLIDE 137 +++ + +N+ + +S VL E Sbjct: 140 EELTKRVNAAVAPVQVSAVLFKE 162 >gi|148266213|ref|YP_001232919.1| flagellar basal body-associated protein FliL [Geobacter uraniireducens Rf4] gi|146399713|gb|ABQ28346.1| flagellar basal body-associated protein FliL [Geobacter uraniireducens Rf4] Length = 166 Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 13/96 (13%), Positives = 34/96 (35%), Gaps = 6/96 (6%) Query: 47 KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFV 103 + + ++ +G Y +K+ F + + + + D + LL+ M + Sbjct: 72 PLDPFIV-NIYDGQEIRYLKIKVEFEMAGPEVKPEIDARQSALRDAILVLLTTKTMREVQ 130 Query: 104 QIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ LR +I L +++V + Sbjct: 131 DLQGKN--QLRDEILATTGKILSVGRVTKVYFTDFV 164 >gi|309779463|ref|ZP_07674224.1| flagellar basal body-associated protein FliL [Ralstonia sp. 5_7_47FAA] gi|308921704|gb|EFP67340.1| flagellar basal body-associated protein FliL [Ralstonia sp. 5_7_47FAA] Length = 165 Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 12/131 (9%), Positives = 35/131 (26%), Gaps = 6/131 (4%) Query: 14 VTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV 73 + + + P + + E +++ Y + ++F Sbjct: 34 MGGGAAWFFLGGGNHAASGPAAPSKPKEPV-FVPMETLTVNLQPEEGNDRYLQIGITFKS 92 Query: 74 NDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIK-AFGFDNLRKKIKEDLNSRLGSQF 129 D +K + LL+ + ++ E + +G + Sbjct: 93 FDKHAEEQIKTYTPELRSKVLMLLASKTPTELYPADGKVKLAKEIVELCEHVFKAVGKES 152 Query: 130 -ISEVLIDELN 139 +++VL Sbjct: 153 PVADVLFTNFV 163 >gi|89075519|ref|ZP_01161930.1| flagellar basal body-associated protein [Photobacterium sp. SKA34] gi|89048791|gb|EAR54362.1| flagellar basal body-associated protein [Photobacterium sp. SKA34] Length = 160 Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 16/150 (10%), Positives = 36/150 (24%), Gaps = 14/150 (9%) Query: 4 FLFSGIWISVVTLISFYMLFLRS---------MDTMVENHVPPLAIKNTNIIKSELVSIP 54 L S + + V+ L T+ EN P + + + Sbjct: 9 MLISAVAVIVILAAGIGFWLLNGDDAKESPQVAATVQENTASPAPVMSAYYVVLPQPFTF 68 Query: 55 SVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF- 110 +V+ +K+ +V + + L + Sbjct: 69 NVTGDTRDRVVQIKVQLMVRGDKNEALAKLHIPLIESTLLQAFGVATVEQLRSPNGRDQL 128 Query: 111 -DNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + +K + G+ + VL Sbjct: 129 RQQALEAVKATMVKVAGTPAVERVLFTGFV 158 >gi|209964206|ref|YP_002297121.1| flagellar basal body-associated protein FliL [Rhodospirillum centenum SW] gi|209957672|gb|ACI98308.1| flagellar basal body-associated protein FliL [Rhodospirillum centenum SW] Length = 173 Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 41/146 (28%), Gaps = 11/146 (7%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENH------VPPLAIKNTNIIKSELVSIPS 55 L + + I + L D P + V + Sbjct: 27 LFIVLPILVIGAAAAGVVFSGILHKGDEEHAEEEETHAAPPAECKGPPAFVDFPDVLVNL 86 Query: 56 VSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDN 112 + + + + + D + + TD L + D + G Sbjct: 87 NTKERRPQFLKLNIKLELCSALDVPAVTAVLPRITDTFQVYLRELRVDDLN--GSAGVYR 144 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDEL 138 LR+++ +N+ + +VLI E+ Sbjct: 145 LREELLMRVNTAAYPTRVQDVLIQEI 170 >gi|168186130|ref|ZP_02620765.1| flagellar basal body-associated protein FliL [Clostridium botulinum C str. Eklund] gi|169295729|gb|EDS77862.1| flagellar basal body-associated protein FliL [Clostridium botulinum C str. Eklund] Length = 163 Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 21/124 (16%), Positives = 40/124 (32%), Gaps = 9/124 (7%) Query: 22 LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY 81 + M P N + + S+ Y +S D +E Sbjct: 39 ASKTNPKGMASIGSIPQDTLNLKTFGLDEFLLNLKSDDNSSKYLKTNISIGYADVKENKE 98 Query: 82 LKEI-------ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVL 134 L++ D + ++L DF + + ++K+IK+ +N L I V Sbjct: 99 LEDELKNKKAIIRDTINSVLRSKKKEDFATNEQ--VERIKKEIKDKVNPLLQKGQIYNVY 156 Query: 135 IDEL 138 E+ Sbjct: 157 FSEI 160 >gi|207092675|ref|ZP_03240462.1| flagellar basal body-associated protein FliL [Helicobacter pylori HPKX_438_AG0C1] Length = 144 Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 42 NTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPP 98 ++ VS + Y +S +++ + + +K D + +LS Sbjct: 45 GPLYAIDAPFAVNLVSQ-NGRRYLKASISLELSNEKLLNEVKVKDTAIKDTIIEILSSKS 103 Query: 99 MGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + + V K L+ +IK LNS L FI V + Sbjct: 104 VEEVVTNKGKN--KLKDEIKSHLNSFLIDGFIKNVFFTDF 141 >gi|66046677|ref|YP_236518.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. syringae B728a] gi|289678976|ref|ZP_06499866.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. syringae FF5] gi|302185371|ref|ZP_07262044.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. syringae 642] gi|63257384|gb|AAY38480.1| Flagellar basal body-associated protein FliL [Pseudomonas syringae pv. syringae B728a] gi|330940701|gb|EGH43712.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. pisi str. 1704B] gi|330972445|gb|EGH72511.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. aceris str. M302273PT] Length = 170 Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 36/149 (24%), Gaps = 11/149 (7%) Query: 2 LKFLFSGIWISVVT----LISFYMLF--LRSMDTMVENHVPPLAIKNTNIIKSELVSIPS 55 LK + + ++ + + + L S + + Sbjct: 20 LKLIIIAVVALLLAVGLSVGATWFLMHKSESKVDPAAAAAAANVKPVAVFEPMTPAFVVN 79 Query: 56 VSNGVLQAYFLVKLSF---IVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF-- 110 + Q Y V ++ D + + + L L + P Sbjct: 80 FNANGRQRYMQVSITMLGRNAADMEALKVHMPLIRNNLVMLFAAIPFESLASPIGQEMLR 139 Query: 111 DNLRKKIKEDLNSRLGSQFISEVLIDELN 139 I+E LG I ++L Sbjct: 140 QKATASIQEVAQKELGKTVIEQLLFTNFV 168 >gi|170725979|ref|YP_001760005.1| flagellar basal body-associated protein FliL [Shewanella woodyi ATCC 51908] gi|169811326|gb|ACA85910.1| flagellar basal body-associated protein FliL [Shewanella woodyi ATCC 51908] Length = 172 Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 16/148 (10%), Positives = 38/148 (25%), Gaps = 16/148 (10%) Query: 6 FSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAI-------KNTNIIKSELVSIPSVSN 58 G+ + + + S + A + + ++ Sbjct: 25 VIGLVLLLAIGGGVWFFLGSSEPSDEAAVEGEAAEVVEEVNTGEAFYVGMPRPFLFNLPG 84 Query: 59 GVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 +K+ +V +D + D L T S + + LR+ Sbjct: 85 ASRSRLVEIKVQLMVRGGDDDVLIKKHIPLIEDALLTTFSSADVQKMSSLAGKD--ELRQ 142 Query: 116 ----KIKEDLNSRLGSQFISEVLIDELN 139 ++ L G + + +VL Sbjct: 143 LALLNVQNTLQPVTGRKVVEKVLFTGFV 170 >gi|37525865|ref|NP_929209.1| flagellar basal body-associated protein FliL [Photorhabdus luminescens subsp. laumondii TTO1] gi|36785294|emb|CAE14235.1| Flagellar protein FliL [Photorhabdus luminescens subsp. laumondii TTO1] Length = 158 Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats. Identities = 20/144 (13%), Positives = 46/144 (31%), Gaps = 10/144 (6%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSV-SNG 59 M+ + + + T I Y + ++ AI + E ++ + + Sbjct: 16 MILLVLIAV---IGTAIGGYSWWALKQAKESDSAASK-AIAVPVFMTLEPFTVNLIDNED 71 Query: 60 VLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQ--IKAFGFDNLR 114 + ++ + D + R + LLS D K D+++ Sbjct: 72 HFDRVLYIGVTLRLADEKTRQRFHEYLPEVRSRMLLLLSRQKSADLAHDSGKLRLMDDIK 131 Query: 115 KKIKEDLNSRLGSQFISEVLIDEL 138 + ++ L Q I++VL Sbjct: 132 QTLRPTLVPGEPDQVITDVLFTTF 155 >gi|260886643|ref|ZP_05897906.1| flagellar basal body-associated protein FliL [Selenomonas sputigena ATCC 35185] gi|330839525|ref|YP_004414105.1| flagellar basal body-associated protein FliL [Selenomonas sputigena ATCC 35185] gi|260863786|gb|EEX78286.1| flagellar basal body-associated protein FliL [Selenomonas sputigena ATCC 35185] gi|329747289|gb|AEC00646.1| flagellar basal body-associated protein FliL [Selenomonas sputigena ATCC 35185] Length = 169 Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 39/134 (29%), Gaps = 15/134 (11%) Query: 17 ISFYMLFLRSMDTMVENHVPP-LAIKNTNIIKSELV---SIPSVSNGVLQAYFLVKLSFI 72 + + M + P L+ IK + +V + + Sbjct: 36 GISFFITQHMMANNAGDGGPSRLSHDPGVFIKLGDPKDGILVNVGGLKAGRFLKTSIVLE 95 Query: 73 VN--------DSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSR 124 +N D + + + D L + + K D L+ +++ LN Sbjct: 96 MNPGKKDNIADGKLLAPAETKVMDVTLQTLRSLKVEELDAGKQ---DELKTTLRDSLNKA 152 Query: 125 LGSQFISEVLIDEL 138 LG + EV I Sbjct: 153 LGEGSVYEVYITSF 166 >gi|210135008|ref|YP_002301447.1| flagellar basal body-associated protein FliL [Helicobacter pylori P12] gi|210132976|gb|ACJ07967.1| flagellar biosynthesis protein [Helicobacter pylori P12] Length = 183 Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 42 NTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPP 98 ++ VS + Y +S +++ + + +K D + +LS Sbjct: 84 GPLYAIDAPFAVNLVSQ-NGRRYLKASISLELSNEKLLNEVKVKDTAIKDTIIEILSSKS 142 Query: 99 MGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + + V K L+ +IK LNS L FI V + Sbjct: 143 VEEVVTNKGKN--KLKDEIKSHLNSFLIDGFIKNVFFTDF 180 >gi|308182965|ref|YP_003927092.1| flagellar basal body-associated protein FliL [Helicobacter pylori PeCan4] gi|261839376|gb|ACX99141.1| flagellar basal body-associated protein FliL [Helicobacter pylori 52] gi|308065150|gb|ADO07042.1| flagellar basal body-associated protein FliL [Helicobacter pylori PeCan4] Length = 183 Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 42 NTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPP 98 ++ VS + Y +S +++ + + +K D + +LS Sbjct: 84 GPLYAIDAPFAVNLVSQ-NGRRYLKASISLELSNEKLLNEVKVKDTAIKDTIIEILSSKS 142 Query: 99 MGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + + V K L+ +IK LNS L FI V + Sbjct: 143 VEEVVTNKGKN--KLKDEIKSHLNSFLIDGFIKNVFFTDF 180 >gi|167623385|ref|YP_001673679.1| flagellar basal body-associated protein FliL [Shewanella halifaxensis HAW-EB4] gi|167353407|gb|ABZ76020.1| flagellar basal body-associated protein FliL [Shewanella halifaxensis HAW-EB4] Length = 172 Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 39/150 (26%), Gaps = 13/150 (8%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRS------MDTMVENHVPPLAIKNTNIIKSELVSIPS 55 + F G + V I+ Y+L V + + Sbjct: 22 ILFGAIGAVLITVIAITAYLLLSSDDAAQVTGADDVVAAESAPRTGEAFYAAMPRPFLFN 81 Query: 56 VSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFG--- 109 + + +K+ +V +D + D L T SG + Sbjct: 82 LPDNGRTRLVEIKVQLMVRGSDDDTLIKKHIPLIEDALLTTFSGADIQKLSSPAGKDELR 141 Query: 110 FDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 LR ++ L G + ++L Sbjct: 142 LLALRN-VQNTLQPVTGRTVVEKILFTGFV 170 >gi|15611812|ref|NP_223463.1| flagellar basal body-associated protein FliL [Helicobacter pylori J99] gi|254779218|ref|YP_003057323.1| flagellar basal body-associated protein FliL [Helicobacter pylori B38] gi|298736512|ref|YP_003729038.1| flagellar FliL protein [Helicobacter pylori B8] gi|4155301|gb|AAD06317.1| putative FLAGELLAR BIOSYNTHESIS PROTEIN [Helicobacter pylori J99] gi|254001129|emb|CAX29084.1| Flagellar FliL protein [Helicobacter pylori B38] gi|298355702|emb|CBI66574.1| flagellar FliL protein [Helicobacter pylori B8] gi|307637499|gb|ADN79949.1| Flagellar biosynthesis protein [Helicobacter pylori 908] gi|317014218|gb|ADU81654.1| flagellar basal body-associated protein FliL [Helicobacter pylori Gambia94/24] gi|325996088|gb|ADZ51493.1| Flagellar biosynthesis protein [Helicobacter pylori 2018] gi|325997684|gb|ADZ49892.1| Flagellar biosynthesis protein [Helicobacter pylori 2017] Length = 183 Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 42 NTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPP 98 ++ VS + Y +S +++ + + +K D + +LS Sbjct: 84 GPLYAIDAPFAVNLVSQ-NGRRYLKASISLELSNEKLLNEVKVKDTAIKDTIIEILSSKS 142 Query: 99 MGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + + V K L+ +IK LNS L FI V + Sbjct: 143 VEEVVTNKGKN--KLKDEIKSHLNSFLIDGFIKNVFFTDF 180 >gi|15645428|ref|NP_207602.1| flagellar basal body-associated protein FliL [Helicobacter pylori 26695] gi|108563219|ref|YP_627535.1| flagellar basal body-associated protein FliL [Helicobacter pylori HPAG1] gi|188527347|ref|YP_001910034.1| flagellar basal body-associated protein FliL [Helicobacter pylori Shi470] gi|208434720|ref|YP_002266386.1| putative flagellar biosynthesis protein [Helicobacter pylori G27] gi|308184594|ref|YP_003928727.1| flagellar basal body-associated protein FliL [Helicobacter pylori SJM180] gi|2313942|gb|AAD07860.1| predicted coding region HP0809 [Helicobacter pylori 26695] gi|107836992|gb|ABF84861.1| putative flagellar biosynthesis protein [Helicobacter pylori HPAG1] gi|188143587|gb|ACD48004.1| flagellar basal body-associated protein FliL [Helicobacter pylori Shi470] gi|208432649|gb|ACI27520.1| putative flagellar biosynthesis protein [Helicobacter pylori G27] gi|261837961|gb|ACX97727.1| flagellar biosynthesis protein [Helicobacter pylori 51] gi|297380007|gb|ADI34894.1| flagellar basal body-associated protein FliL [Helicobacter pylori v225d] gi|308060514|gb|ADO02410.1| flagellar basal body-associated protein FliL [Helicobacter pylori SJM180] gi|308063404|gb|ADO05291.1| flagellar basal body-associated protein FliL [Helicobacter pylori Sat464] gi|315586527|gb|ADU40908.1| flagellar basal body-associated protein FliL [Helicobacter pylori 35A] gi|317009181|gb|ADU79761.1| flagellar basal body-associated protein FliL [Helicobacter pylori India7] gi|317011025|gb|ADU84772.1| flagellar basal body-associated protein FliL [Helicobacter pylori SouthAfrica7] gi|317012620|gb|ADU83228.1| flagellar basal body-associated protein FliL [Helicobacter pylori Lithuania75] gi|317177361|dbj|BAJ55150.1| flagellar basal body-associated protein FliL [Helicobacter pylori F16] gi|317178831|dbj|BAJ56619.1| flagellar basal body-associated protein FliL [Helicobacter pylori F30] gi|317180572|dbj|BAJ58358.1| flagellar basal body-associated protein FliL [Helicobacter pylori F32] gi|332673386|gb|AEE70203.1| flagellar basal body-associated protein FliL [Helicobacter pylori 83] Length = 183 Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 42 NTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPP 98 ++ VS + Y +S +++ + + +K D + +LS Sbjct: 84 GPLYAIDAPFAVNLVSQ-NGRRYLKASISLELSNEKLLNEVKVKDTAIKDTIIEILSSKS 142 Query: 99 MGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + + V K L+ +IK LNS L FI V + Sbjct: 143 VEEVVTNKGKN--KLKDEIKSHLNSFLIDGFIKNVFFTDF 180 >gi|258511383|ref|YP_003184817.1| flagellar basal body-associated protein FliL [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] gi|257478109|gb|ACV58428.1| flagellar basal body-associated protein FliL [Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446] Length = 144 Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 12/137 (8%), Positives = 46/137 (33%), Gaps = 4/137 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 ML + + I+ + + + + + + ++ +G+ Sbjct: 8 MLMIVLGIVVIAGAAIGYLLYSKKHHAAGGAPSKLSAKQMADLQ-VTLPQMTTNLAGSGI 66 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 +Q ++ ++ + ++ +D + ++ + G + L+ I Sbjct: 67 IQFTLTLQADSKSTKNEL-NLMEPQISDAVNGIMREFTSDELR--TDAGLNRLKATIVSQ 123 Query: 121 LNSRLGSQFISEVLIDE 137 +N L + ++ V + + Sbjct: 124 VNRLLPTGKVTAVYLSQ 140 >gi|317182121|dbj|BAJ59905.1| flagellar basal body-associated protein FliL [Helicobacter pylori F57] Length = 183 Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 42 NTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPP 98 ++ VS + Y +S +++ + + +K D + +LS Sbjct: 84 GPLYAIDAPFAVNLVSQ-NGRRYLKASISLELSNEKLLNEVKVKDTAIKDTIIEILSSKS 142 Query: 99 MGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + + V K L+ +IK LNS L FI V + Sbjct: 143 VEEVVTNKGKN--KLKDEIKSHLNSFLIDGFIKNVFFTDF 180 >gi|302389671|ref|YP_003825492.1| flagellar basal body-associated protein FliL [Thermosediminibacter oceani DSM 16646] gi|302200299|gb|ADL07869.1| flagellar basal body-associated protein FliL [Thermosediminibacter oceani DSM 16646] Length = 155 Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 50/138 (36%), Gaps = 12/138 (8%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 L + +++ + Y + + + + ++N + Sbjct: 24 LLLLIVLFMIISTATTYF--IAKNLIAEDGEKKEEKKETITYQLGD-----FLTNLADKG 76 Query: 64 YFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 Y + + I++D + ++ D +Y++L + G + L+K++KE Sbjct: 77 YIKLSIVCILSDKETEKQIQAKEYEIKDRVYSILRSKTYDSVK--DSKGMEILKKELKEK 134 Query: 121 LNSRLGSQFISEVLIDEL 138 +N+ +G + +V + Sbjct: 135 INAVVGKGKVEDVFFTNI 152 >gi|300871254|ref|YP_003786127.1| endoflagellar basal body-associated protein [Brachyspira pilosicoli 95/1000] gi|300688955|gb|ADK31626.1| endoflagellar basal body-associated protein [Brachyspira pilosicoli 95/1000] Length = 181 Score = 54.3 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 16/146 (10%), Positives = 48/146 (32%), Gaps = 11/146 (7%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAI----KNTNIIKSELVSIPSVS 57 + + + I + + +S+ + + + + Sbjct: 35 ILMIVAAILVVALISGLIAFFVSKSVGRAAGVNAGVVDGMIKQPPPTYFAITPEFNVNTA 94 Query: 58 NGVLQAYFLVKLSFIVNDSQERSYLK-----EIATDYLYTLLSGPPMGDFVQIKAFGFDN 112 + + + V + + ++ ++ + D +Y+L+S + + Sbjct: 95 DMDVARFVRVSIVLTYTTNVKQLAVELPERGYMIRDRIYSLISSYTYDQLRTNEGR--EQ 152 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDEL 138 L+ IK ++NS L + I ++L D Sbjct: 153 LKADIKREINSMLKNGQIDDILFDSF 178 >gi|217034144|ref|ZP_03439564.1| hypothetical protein HP9810_868g37 [Helicobacter pylori 98-10] gi|216943428|gb|EEC22884.1| hypothetical protein HP9810_868g37 [Helicobacter pylori 98-10] Length = 183 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 42 NTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPP 98 ++ VS + Y +S +++ + + +K D + +LS Sbjct: 84 GPLYAIDAPFAVNLVSQ-NGRRYLKASISLELSNEKLLNEVKVKDTAIKDTIIEILSSKS 142 Query: 99 MGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + + V K L+ +IK LNS L FI V + Sbjct: 143 VEEVVTNKGKN--KLKDEIKSHLNSFLIDGFIKNVFFTDF 180 >gi|308062128|gb|ADO04016.1| flagellar basal body-associated protein FliL [Helicobacter pylori Cuz20] Length = 183 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 42 NTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPP 98 ++ VS + Y +S +++ + + +K D + +LS Sbjct: 84 GPLYAIDAPFAVNLVSQ-NGRRYLKASISLELSNEKLLNEVKVKDTAIKDTIIEILSSKS 142 Query: 99 MGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + + V K L+ +IK LNS L FI V + Sbjct: 143 VEEVVTNKGKN--KLKDEIKSHLNSFLIDGFIKNVFFTDF 180 >gi|304311106|ref|YP_003810704.1| Flagellar basal body-associated protein [gamma proteobacterium HdN1] gi|301796839|emb|CBL45051.1| Flagellar basal body-associated protein [gamma proteobacterium HdN1] Length = 178 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 53/154 (34%), Gaps = 17/154 (11%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSEL----VSIPSV 56 M+ + + + + V S +F+ S + E+ A E + P + Sbjct: 25 MMIIIVAAVALIVGGAGSGVAVFMMSKGSGGESADAAKAEAPVEQKPREASYFDFTTPFL 84 Query: 57 SNG---VLQAYFLVKLSFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF 110 N + Y V LSF+ D + + + + LL ++ Sbjct: 85 VNYQWRGREHYMQVSLSFLFRDPAVQALIKEHEPLLRNNIMLLLQAQDFDGLRTLEGK-- 142 Query: 111 DNLRKKIKEDLNSRL-----GSQFISEVLIDELN 139 +++R+ I +++ + L ++ I +V Sbjct: 143 ESIRQLIFDEVQNVLKAQDSSTEGIEQVYFTNFV 176 >gi|218288305|ref|ZP_03492604.1| flagellar basal body-associated protein FliL [Alicyclobacillus acidocaldarius LAA1] gi|218241664|gb|EED08837.1| flagellar basal body-associated protein FliL [Alicyclobacillus acidocaldarius LAA1] Length = 144 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 12/137 (8%), Positives = 46/137 (33%), Gaps = 4/137 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 ML + + I+ + + + + + + ++ +G+ Sbjct: 8 MLMIVLGIVVIAGAAIGYLLYSKKHHTAGGAPSKLSAKQMADLQ-VTLPQMTTNLAGSGI 66 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 +Q ++ ++ + ++ +D + ++ + G + L+ I Sbjct: 67 IQFTLTLQADSKSTKNEL-NLMEPQISDAVNGIMREFTSDELR--TDAGLNRLKATIVSQ 123 Query: 121 LNSRLGSQFISEVLIDE 137 +N L + ++ V + + Sbjct: 124 VNRLLPTGKVTAVYLSQ 140 >gi|109947384|ref|YP_664612.1| flagellar basal body-associated protein FliL [Helicobacter acinonychis str. Sheeba] gi|109714605|emb|CAJ99613.1| flagellar protein FliL [Helicobacter acinonychis str. Sheeba] Length = 183 Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 18/94 (19%), Positives = 37/94 (39%), Gaps = 5/94 (5%) Query: 48 SELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQ 104 + ++ + + Y +S +++ + + +K D + +LS + + V Sbjct: 89 IDTPFAVNLVSQNGRRYLKASISLELSNEKLLNEVKVKDTAIKDTIIEILSSKSVEEVVT 148 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 K L+ +IK LNS L FI V + Sbjct: 149 NKGKN--KLKDEIKSHLNSFLIDGFIKNVFFTDF 180 >gi|328958272|ref|YP_004375658.1| flagellar basal body-associated protein Fl iL [Carnobacterium sp. 17-4] gi|328674596|gb|AEB30642.1| flagellar basal body-associated protein Fl iL [Carnobacterium sp. 17-4] Length = 155 Score = 53.9 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 17/138 (12%), Positives = 48/138 (34%), Gaps = 6/138 (4%) Query: 6 FSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA-Y 64 + +++++ + F + + + I + + I S ++ + Sbjct: 18 IAIVFLAIAIVGVVSFGFTSGKAQAIISDLSKEEIVEV-TLPLDEFLINLDSGTSVKKNF 76 Query: 65 FLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDL 121 ++LS + L D + ++L D V + ++K++ E + Sbjct: 77 LKIELSLHSSKEGAEEKLSANVAQIRDSVISVLRKKT-EDTVFKEEENTLVIKKELIEAI 135 Query: 122 NSRLGSQFISEVLIDELN 139 N++L + V I + Sbjct: 136 NNKLDEDIVDNVFITNIV 153 >gi|206561844|ref|YP_002232609.1| flagellar basal body-associated protein FliL [Burkholderia cenocepacia J2315] gi|198037886|emb|CAR53830.1| flagellar FliL protein [Burkholderia cenocepacia J2315] Length = 166 Score = 53.9 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 15/103 (14%), Positives = 32/103 (31%), Gaps = 9/103 (8%) Query: 44 NIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMG 100 + +++ S+ Q Y V LS + D + + L + LS Sbjct: 64 VFFPLDPLTVNLQSDDGAQHYLRVGLSLKLTDPKAQEQLTARMPEIRSRILLALSNKHPE 123 Query: 101 DFVQIKAFGFDNLRKKIKEDLNSRLGSQ----FISEVLIDELN 139 + +L +++E + + +VL E Sbjct: 124 ELATPDGK--RSLATELRELIEQPTQPGNQRAKVDDVLFTEFV 164 >gi|217032905|ref|ZP_03438382.1| hypothetical protein HPB128_152g22 [Helicobacter pylori B128] gi|216945399|gb|EEC24067.1| hypothetical protein HPB128_152g22 [Helicobacter pylori B128] Length = 154 Score = 53.9 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 20/100 (20%), Positives = 37/100 (37%), Gaps = 6/100 (6%) Query: 42 NTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPP 98 ++ VS + Y +S +++ + + +K D + +LS Sbjct: 55 GPLYAIDAPFAVNLVSQ-NGRRYLKASISLELSNEKLLNEVKVKDTAIKDTIIEILSSKS 113 Query: 99 MGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + + V K L+ +IK LNS L FI V + Sbjct: 114 VEEVVTNKGKN--KLKDEIKSHLNSFLIDGFIKNVFFTDF 151 >gi|325273546|ref|ZP_08139777.1| flagellar basal body-associated protein FliL [Pseudomonas sp. TJI-51] gi|324101324|gb|EGB98939.1| flagellar basal body-associated protein FliL [Pseudomonas sp. TJI-51] Length = 165 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/149 (12%), Positives = 42/149 (28%), Gaps = 12/149 (8%) Query: 2 LKFLFSGIWISVVT----LISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS 57 LK + + ++ + + + + +S + + + Sbjct: 16 LKLIIMAVVGLLLAIGLSVGATWFIMHKSEPAPAAEAAASNVKPAAIYQALTPAFVVNFN 75 Query: 58 NGVLQAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 Q Y V ++ + + + L + SG G + LR Sbjct: 76 QNGRQRYMQVSITMQARNQADLDALKVHMPVIRNNLVMMFSGQGFDALAS-SPVGQEMLR 134 Query: 115 KK----IKEDLNSRLGSQFISEVLIDELN 139 +K ++E LG I ++L Sbjct: 135 QKATAVVQEVAQKELGKPVIDQLLFTNFV 163 >gi|119385375|ref|YP_916431.1| flagellar basal body-associated protein FliL [Paracoccus denitrificans PD1222] gi|119375142|gb|ABL70735.1| flagellar basal body-associated protein FliL [Paracoccus denitrificans PD1222] Length = 160 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 17/118 (14%), Positives = 33/118 (27%), Gaps = 2/118 (1%) Query: 21 MLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERS 80 S+ + E A + + + + VK+ E Sbjct: 42 FWSPMSLFSAKEQVAQAEAAPSLAFVDIPQIVLTLAGPRARTLVMTVKIETDQGHRAEVE 101 Query: 81 YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 +L D L+ F + +R ++ LG + ++VLI E Sbjct: 102 HLIPRLLDSFNGFLADIDGTAFEKRGILDI--VRDELATRAVFVLGREAFTDVLITEF 157 >gi|119469991|ref|ZP_01612796.1| flagellar basal body-associated protein FliL [Alteromonadales bacterium TW-7] gi|119446701|gb|EAW27974.1| flagellar basal body-associated protein FliL [Alteromonadales bacterium TW-7] Length = 175 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/151 (12%), Positives = 43/151 (28%), Gaps = 20/151 (13%) Query: 8 GIWISVVTLISFYMLFLRSMDTMV--------ENHVPPLAIKNTN-----IIKSELVSIP 54 + VV + + L S + + P + + + + Sbjct: 24 AAVLLVVGGAAGFFLMSGSDEPVETLDEETTLSEEAPEASGSSAEIGSALYVAMPRPFVF 83 Query: 55 SVSNGVLQAYFLVKLSFIVN---DSQERSYLKEIATDYLYTLLSGPPMGDFVQI---KAF 108 +V +K+ +V + + + L ++ S + + Sbjct: 84 NVPGSSRDRIVQIKVQLLVRGEVNEETAKKHIPLIEGKLLSVFSTTTADELSTSAGKETL 143 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 F L + ++ LN GS+ I VL Sbjct: 144 RFSAL-ETVQTALNDVEGSKVIERVLFTGFV 173 >gi|300693353|ref|YP_003749326.1| flagellar basal body-associated protein flil [Ralstonia solanacearum PSI07] gi|299075390|emb|CBJ34685.1| Flagellar basal body-associated protein FliL [Ralstonia solanacearum PSI07] Length = 163 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 38/132 (28%), Gaps = 10/132 (7%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN 74 + F + PP + + E +++ Y + ++F Sbjct: 33 GMGGAAAWFFLGGGSHAAASAPPKPKEPF-FVPMETLTVNLQPEEGNDRYLQIAITFKSY 91 Query: 75 DSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN---SRLGSQ 128 D +K + LLS + + L K+I E +G + Sbjct: 92 DKHAEEAIKSYTPELRSRVLMLLSSKAPAELYSNEGKA--KLAKEIVEQCEQAYKAVGKE 149 Query: 129 F-ISEVLIDELN 139 +++VL Sbjct: 150 SPVADVLFTNFV 161 >gi|325981185|ref|YP_004293587.1| flagellar basal body-associated protein FliL [Nitrosomonas sp. AL212] gi|325530704|gb|ADZ25425.1| flagellar basal body-associated protein FliL [Nitrosomonas sp. AL212] Length = 164 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 42/126 (33%), Gaps = 6/126 (4%) Query: 19 FYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQE 78 + S D E P K T I ++ ++ ++ Y V L+ +++ Sbjct: 38 TWYFMQISGDGESETEKPKSKAKPTTFIDLDIFTV-NLQPEENNQYLQVGLTVKARETEV 96 Query: 79 RSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGF--DNLRKKIKEDLNSRLGSQFISEV 133 + + + + LLS D I + +I+ ++S + + EV Sbjct: 97 VQEMAKQMPLIRNRILMLLSSKKAADLSSIAGKQQLSQQISDEIRHSIDSEDLQEDVREV 156 Query: 134 LIDELN 139 L Sbjct: 157 LFTSFV 162 >gi|182418444|ref|ZP_02949738.1| flagellar basal body-associated protein FliL [Clostridium butyricum 5521] gi|237666619|ref|ZP_04526604.1| flagellar basal body-associated protein FliL [Clostridium butyricum E4 str. BoNT E BL5262] gi|182377826|gb|EDT75370.1| flagellar basal body-associated protein FliL [Clostridium butyricum 5521] gi|237657818|gb|EEP55373.1| flagellar basal body-associated protein FliL [Clostridium butyricum E4 str. BoNT E BL5262] Length = 162 Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 18/139 (12%), Positives = 46/139 (33%), Gaps = 14/139 (10%) Query: 1 MLKFLFSG-IWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59 M+ G I + T Y+ + + V A + E ++ ++++ Sbjct: 24 MVILFILGLIVLGGATFGGVYLFMKTNKTVSAQEVVVENA-----YVDLEEFTV-NLADE 77 Query: 60 VLQAYFLVKLSFIVN--DSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 + YF +LS + + + + + D + G I ++ Sbjct: 78 GGKRYFKGELSVGYDKSNKKMAEEITANTVVVRDTVIFYFKGQKADFINNINNE--QKIK 135 Query: 115 KKIKEDLNSRLGSQFISEV 133 + +N +L I+++ Sbjct: 136 DDLISAINKQLQKGKITDI 154 >gi|326796459|ref|YP_004314279.1| flagellar basal body-associated protein FliL [Marinomonas mediterranea MMB-1] gi|326547223|gb|ADZ92443.1| flagellar basal body-associated protein FliL [Marinomonas mediterranea MMB-1] Length = 174 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 15/148 (10%), Positives = 38/148 (25%), Gaps = 19/148 (12%) Query: 9 IWISVVTLISFYMLFLRSMDTMVENHVPPL----------AIKNTNIIKSELVSIPSVSN 58 + + ++ +L ++ + + Sbjct: 27 VAVLILLGGGGAAAYLFLFSGDEPLPEESSVDDAAAQAVQTDGPAIYLELDQPFVVDFMV 86 Query: 59 GVLQAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 Q Y +K++ D + + L L S + ++ L++ Sbjct: 87 SGRQRYLQLKMTLKSRDQVQIDAVKIHMPLIRNSLVLLFSSQSFDELQTLEGK--KALKQ 144 Query: 116 KIKEDLNSRL----GSQFISEVLIDELN 139 E +N+ L G + +VL Sbjct: 145 AALESVNNILTQETGVGGMQDVLFTNFV 172 >gi|149908451|ref|ZP_01897114.1| hypothetical flagellar protein FliL [Moritella sp. PE36] gi|149808614|gb|EDM68549.1| hypothetical flagellar protein FliL [Moritella sp. PE36] Length = 168 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 12/137 (8%), Positives = 34/137 (24%), Gaps = 14/137 (10%) Query: 15 TLISFYM-----LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKL 69 + + +V V + + + ++ + +K+ Sbjct: 32 GGGAAFFFLSDNSAAADSSGVVTETVDKTINETAYYVALPRPFVFNIIGLKRERLVQIKV 91 Query: 70 SFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL- 125 +V ++ + L + S + LR ++N L Sbjct: 92 QLMVRGSDNKDLAKANLPLIESTLLQVFSATTEQQLATYQGKEL--LRADSLTNVNEILT 149 Query: 126 ---GSQFISEVLIDELN 139 G + ++L Sbjct: 150 KYTGKGVVEKILFSGFV 166 >gi|117620220|ref|YP_854712.1| flagellar basal body-associated protein FliL [Aeromonas hydrophila subsp. hydrophila ATCC 7966] gi|117561627|gb|ABK38575.1| flagellar basal body-associated protein FliL [Aeromonas hydrophila subsp. hydrophila ATCC 7966] Length = 144 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 14/99 (14%), Positives = 34/99 (34%), Gaps = 9/99 (9%) Query: 49 ELVSIPSVSNGVLQAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQI 105 + +S+G Y V + + + + + D + L+ + Sbjct: 47 PDIITNYLSDGKTLGYVRVTVELMAENEADLKLLEQHDPLIRDAIIRLMGSKSADQIKSL 106 Query: 106 KAFGFDNLRKKIKEDLNSRL----GSQFISEVLIDELNY 140 ++LRK+ + N L G + + E++ + Y Sbjct: 107 --VSREDLRKECQTRANELLVKETGKKAVRELIFTKFLY 143 >gi|73532538|dbj|BAE19827.1| flagellar biosynthesis protein [Edwardsiella tarda] Length = 159 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 19/143 (13%), Positives = 46/143 (32%), Gaps = 8/143 (5%) Query: 3 KFLFSGIWISVVTL-ISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 K++ + + Y + T ++ V I + + ++ +SNG Sbjct: 15 KWVLILLVLFAAPRPGGGYFGWHYYQQT-QQHTVKQAPIPLPVFMALDPFTVNLLSNGDD 73 Query: 62 Q-AYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQ--IKAFGFDNLRK 115 V ++ + D + + L LLS K D ++ Sbjct: 74 SDRVLYVGITLRLPDEGTRKRLNDYLPEVRSRLLMLLSRQQAATLASEQGKKALMDEIKS 133 Query: 116 KIKEDLNSRLGSQFISEVLIDEL 138 ++ + S +Q +++V+ Sbjct: 134 TLRAPVVSGQPAQMVNDVMFTAF 156 >gi|28869172|ref|NP_791791.1| flagellar protein FliL [Pseudomonas syringae pv. tomato str. DC3000] gi|213967551|ref|ZP_03395699.1| flagellar protein FliL [Pseudomonas syringae pv. tomato T1] gi|301382888|ref|ZP_07231306.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. tomato Max13] gi|302061098|ref|ZP_07252639.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. tomato K40] gi|302131286|ref|ZP_07257276.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28852412|gb|AAO55486.1| flagellar protein FliL, putative [Pseudomonas syringae pv. tomato str. DC3000] gi|213927852|gb|EEB61399.1| flagellar protein FliL [Pseudomonas syringae pv. tomato T1] Length = 167 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 36/149 (24%), Gaps = 11/149 (7%) Query: 2 LKFLFSGIWISVVT----LISFYMLF--LRSMDTMVENHVPPLAIKNTNIIKSELVSIPS 55 LK + + ++ + + + L S + + Sbjct: 17 LKLIIIAVVALLLAVGLSVGATWFLMHKSESAPDPAAAAAAANVKPVAVFEPMTPAFVVN 76 Query: 56 VSNGVLQAYFLVKLSF---IVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF-- 110 + Q Y V ++ D + + + L L + P Sbjct: 77 FNANGRQRYMQVSITMLGRNAADMEALKVHMPLIRNNLVMLFAAIPFESLASPIGQEMLR 136 Query: 111 DNLRKKIKEDLNSRLGSQFISEVLIDELN 139 I+E LG I ++L Sbjct: 137 QKATASIQEVAQKELGKTVIEQLLFTNFV 165 >gi|260431745|ref|ZP_05785716.1| flagellar basal body-associated protein FliL [Silicibacter lacuscaerulensis ITI-1157] gi|260415573|gb|EEX08832.1| flagellar basal body-associated protein FliL [Silicibacter lacuscaerulensis ITI-1157] Length = 176 Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 25/177 (14%), Positives = 49/177 (27%), Gaps = 36/177 (20%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKN------------------ 42 M+ + I V + + L ++ P K Sbjct: 3 MILPIVFLIAGLVAGVAAGVFLTPAGAPEEHDSSDSPDGKKGDTQTDTKVNDKSSKAHGA 62 Query: 43 --------TNIIK-SELVSIPSVSNGVLQAYFLVKLSFIVNDSQERS--YLKEIATDYLY 91 +K ++ +P V + ++A + LS ++ D Sbjct: 63 GKDEKDGAFEYLKMTKQFVVPVVRSDEIEALVTLSLSLETRPGLSEEFFEVEPKLRDAFL 122 Query: 92 TLLSGPPM---GDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD 145 +L D ++ LR+ + E LG ++ VLI +S D Sbjct: 123 QVLFDHANMGGFDREFTRSDNLGVLRRSLLEAAKKNLGED-VNRVLIMS---VSRQD 175 >gi|188586030|ref|YP_001917575.1| flagellar basal body-associated protein FliL [Natranaerobius thermophilus JW/NM-WN-LF] gi|179350717|gb|ACB84987.1| flagellar basal body-associated protein FliL [Natranaerobius thermophilus JW/NM-WN-LF] Length = 154 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/123 (15%), Positives = 48/123 (39%), Gaps = 11/123 (8%) Query: 22 LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIP------SVSNGVLQAYFLVKLSFIVND 75 + V + P K ++ ++ P ++++ + F V++ +++ Sbjct: 28 GIAYFIAVSVASPDQPTTEKGEEVVSYTGITFPLGEFTTNLADEGARRIFQVEVVVELSE 87 Query: 76 SQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISE 132 S + + D +YT+L + + G + LR++IKE ++ R+ + Sbjct: 88 SGAKSELEEREPQVRDKIYTILRSMKAEELN--EQEGMEELREQIKEAIDERIEEGEVVN 145 Query: 133 VLI 135 V Sbjct: 146 VYF 148 >gi|311068152|ref|YP_003973075.1| flagellar basal body-associated protein FliL [Bacillus atrophaeus 1942] gi|310868669|gb|ADP32144.1| flagellar basal body-associated protein FliL [Bacillus atrophaeus 1942] Length = 140 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 49/129 (37%), Gaps = 11/129 (8%) Query: 14 VTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV 73 + Y + + E ++ + + E ++ S+ +++ + + Sbjct: 18 ALGTAAYFMVSGKLGKSDEEPTIDEIVE--SSVDIEEITTNLKSDHIIR----IAIKLET 71 Query: 74 NDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFI 130 + + + L++ D + TLL D ++ + ++++K+ +NS L + Sbjct: 72 DSKKAKEELEKRDFQVKDAIITLL-ADTNADKIEGDKGK-EAFKRELKDKVNSYLQEGKV 129 Query: 131 SEVLIDELN 139 +V I N Sbjct: 130 EKVYITSFN 138 >gi|296283226|ref|ZP_06861224.1| flagellar basal body-associated protein [Citromicrobium bathyomarinum JL354] Length = 183 Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 14/157 (8%), Positives = 44/157 (28%), Gaps = 24/157 (15%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK-------------------NT 43 K + + + +V + L D + + + Sbjct: 25 KIIAAAGAVLLVGGGAGAFLMGGGSDAEAKESGDHSGKEAKKDAGHGEKSGGGHGEEGGS 84 Query: 44 NIIKSELVSIPSVSNGVLQAYFLVKLSF---IVNDSQERSYLKEIATDYLYTLLSGPPMG 100 +++ + + +N + +++ D+ + D L Sbjct: 85 GLVEVAPLMVNLRTNDGQARFLKLRIMLAPGSPEDATTIEENLPMIIDRYQPFLRELRPE 144 Query: 101 DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 D + L++++ +G +++VLI + Sbjct: 145 DLA--GSAAVYRLKEELILRAADTVGEGVVADVLIQD 179 >gi|326404074|ref|YP_004284156.1| flagellar FliL protein [Acidiphilium multivorum AIU301] gi|325050936|dbj|BAJ81274.1| flagellar FliL protein [Acidiphilium multivorum AIU301] Length = 170 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 15/139 (10%), Positives = 39/139 (28%), Gaps = 6/139 (4%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K G ++ + L+ L++ + + + +K + Sbjct: 32 KLFVIGGAVAAIMLLVV-GLWITGILPHLLGQRNHHKLAGPVYVKVPEIVANLNVPSGQD 90 Query: 63 AYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 +Y ++ + + D + D T L + LR+ + Sbjct: 91 SYVKLEATIELADPKSAKIAMTDMPRVVDVFETYLRAMRPDELRGASGT--YRLREALIN 148 Query: 120 DLNSRLGSQFISEVLIDEL 138 + + ++L EL Sbjct: 149 RVKIATAPAIVKDILFQEL 167 >gi|82702480|ref|YP_412046.1| flagellar basal body-associated protein FliL [Nitrosospira multiformis ATCC 25196] gi|82410545|gb|ABB74654.1| Flagellar basal body-associated protein FliL [Nitrosospira multiformis ATCC 25196] Length = 166 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 14/122 (11%), Positives = 31/122 (25%), Gaps = 10/122 (8%) Query: 25 RSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER---SY 81 + K + E ++ + + L+ V D Sbjct: 46 WYFSQVYNGTGALPKPKPPVFLNLETFTVNLQPEHS-EQHLQTSLTLKVEDESVVNLIKL 104 Query: 82 LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF----ISEVLIDE 137 + + LLSG I+ L ++ ++N + + + VL Sbjct: 105 HMPEVRNRVLLLLSGKTATQISSIEGK--KKLASELTAEINHQFSEERVTGSVENVLFTS 162 Query: 138 LN 139 Sbjct: 163 FV 164 >gi|302878293|ref|YP_003846857.1| flagellar basal body-associated protein FliL [Gallionella capsiferriformans ES-2] gi|302581082|gb|ADL55093.1| flagellar basal body-associated protein FliL [Gallionella capsiferriformans ES-2] Length = 204 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/145 (12%), Positives = 37/145 (25%), Gaps = 25/145 (17%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPL----------------AIKNTN 44 ML + + + + +Y L M E H P Sbjct: 22 MLVIIIAVVVLLAAAGAGYYFLV---MKPHSEKHAKPAVTEEAADEGDEEDEAKPKVPPK 78 Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGD 101 ++ + + Y V ++ +N + + + LL + Sbjct: 79 FVEIGTFTANLMHEDA-DRYLQVAITIKLNKPELEEKVKESNPEIQHRINMLLQSKRPSE 137 Query: 102 FVQIKAFGFDNLRKKIKEDLNSRLG 126 + L IK ++ LG Sbjct: 138 LATPEGKEI--LASDIKANVEYVLG 160 >gi|127512303|ref|YP_001093500.1| flagellar basal body-associated protein FliL [Shewanella loihica PV-4] gi|126637598|gb|ABO23241.1| flagellar basal body-associated protein FliL [Shewanella loihica PV-4] Length = 173 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 43/154 (27%), Gaps = 19/154 (12%) Query: 3 KFLFSGI--WISVVTLISFYMLFLRSMDTMVE--------NHVPPLAIKNTNIIKSELVS 52 K + + VV L LFL + E P + + Sbjct: 20 KLIIFAAIGALLVVLLGVGAWLFLSGGEPSDETMAEGEQTEQSEPANSREAFYVGMPRPF 79 Query: 53 IPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFG 109 + ++ +K+ +V +D + D L T S + + Sbjct: 80 LFNLPGQNRSRLVEIKVQLMVRGSDDDVLIKKHIPLIEDALLTTFSSADVQKLSSLAGKD 139 Query: 110 FDNLRK----KIKEDLNSRLGSQFISEVLIDELN 139 LR+ ++ L G + + +VL Sbjct: 140 --ELRQLALLNVQNTLQPVTGRKVVEKVLFTGFV 171 >gi|308048758|ref|YP_003912324.1| flagellar basal body-associated protein FliL [Ferrimonas balearica DSM 9799] gi|307630948|gb|ADN75250.1| flagellar basal body-associated protein FliL [Ferrimonas balearica DSM 9799] Length = 173 Score = 52.7 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 16/143 (11%), Positives = 37/143 (25%), Gaps = 9/143 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 L + ++ + + + + LA + + ++ Sbjct: 31 LLIAVVFGVMSMIGGGDDPQPTAAGGDSQPLRAGLAQDGALYVPMPRPFLFNLPGPDRTY 90 Query: 64 YFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK---- 116 +K+ V + + D L T S + + LR + Sbjct: 91 LVQIKVQLQVRGTDAQNAARKHIPLIEDTLLTTFSAAEADQIRRKEGKD--ELRTQALLN 148 Query: 117 IKEDLNSRLGSQFISEVLIDELN 139 ++ L S G + VL Sbjct: 149 VQNALQSITGQHQVERVLFTGFV 171 >gi|296531736|ref|ZP_06894562.1| flagellar basal body-associated protein FliL [Roseomonas cervicalis ATCC 49957] gi|296267935|gb|EFH13736.1| flagellar basal body-associated protein FliL [Roseomonas cervicalis ATCC 49957] Length = 177 Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 33/100 (33%), Gaps = 6/100 (6%) Query: 43 TNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPM 99 + ++ +++ + NG ++++ +N L D L L + Sbjct: 79 PSFVEFPEMTLT-LPNGGRPRQLRLRIAVEINGDPALLQPELLSPRIYDSLLLYLR--TL 135 Query: 100 GDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + A D LR + LG + +VLI Sbjct: 136 REGEMEGALAMDRLRGDLHRRFELLLGPGKVRDVLITGFV 175 >gi|113969631|ref|YP_733424.1| flagellar basal body-associated protein FliL [Shewanella sp. MR-4] gi|113884315|gb|ABI38367.1| flagellar basal body-associated protein FliL [Shewanella sp. MR-4] Length = 175 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 20/152 (13%), Positives = 46/152 (30%), Gaps = 18/152 (11%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMD---------TMVENHVPPLAIKNTNIIKSELVSIP 54 F+ +G++ +++ + + S + E P + + Sbjct: 24 FVGAGVFAALLIGGALWFFLGSSDEVPEAAAEGAAPTETTTPAADAAMAAYVPMPRPFLF 83 Query: 55 SVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFD 111 ++ +K+ +V +D + D L T SG + Sbjct: 84 NLPGPDRARLVEIKVQLMVRGQDDDVLTQKHIPLIEDALLTTFSGADVQKLSTQAGKD-- 141 Query: 112 NLRK----KIKEDLNSRLGSQFISEVLIDELN 139 LR+ ++ L S G + + +VL Sbjct: 142 ELRQLALLSVQNTLQSVTGRKVVEKVLFTGFV 173 >gi|332284036|ref|YP_004415947.1| hypothetical protein PT7_0783 [Pusillimonas sp. T7-7] gi|330427989|gb|AEC19323.1| hypothetical protein PT7_0783 [Pusillimonas sp. T7-7] Length = 161 Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats. Identities = 17/149 (11%), Positives = 42/149 (28%), Gaps = 11/149 (7%) Query: 1 MLKFLFSGIWISVVTLISFYMLFL-----RSMDTMVENHVPPLAIKNTNIIKSELVSIPS 55 MLK + + I ++ + S+ P+ + E ++ Sbjct: 12 MLKSMLTTALIVAASVGATLFFSSKASQVSSLLESTLPEPKPVELPKPIFSPLEPFTVT- 70 Query: 56 VSNGVLQAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIK--AFGF 110 + V ++ V++ + + D + LS + + Sbjct: 71 LGTDRGTRILYVAITLRVDNELSRRLIAEFMPEVRDRILRTLSQQNANHIQTPQGRSELV 130 Query: 111 DNLRKKIKEDLNSRLGSQFISEVLIDELN 139 L + I+ N + ++ VL Sbjct: 131 ALLDEAIERPYNPQPIGPSVNSVLFTAFV 159 >gi|302874601|ref|YP_003843234.1| flagellar basal body-associated protein FliL [Clostridium cellulovorans 743B] gi|307690788|ref|ZP_07633234.1| flagellar basal body-associated protein FliL [Clostridium cellulovorans 743B] gi|302577458|gb|ADL51470.1| flagellar basal body-associated protein FliL [Clostridium cellulovorans 743B] Length = 155 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 47/143 (32%), Gaps = 15/143 (10%) Query: 5 LFSGIWISVVTLISFYML--FLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 + G+ +++V + + + F + + + + + + Sbjct: 16 ILIGLLLAIVLVGAAFATAYFYFTKSAEKVTQKTVHPLAHQVTYSLDEFKLNLSEP---K 72 Query: 63 AYFLVKLSFIVNDSQERSYL-------KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 Y K+S + +E K I D + TL+ DF G + L+ Sbjct: 73 TYIQTKISLGYDGGEESEEFAKELETKKTIIRDAVITLIRTKTNTDF---TKEGTETLKI 129 Query: 116 KIKEDLNSRLGSQFISEVLIDEL 138 +I +N L I+ V D + Sbjct: 130 QIINTVNPLLEKGEINHVYFDSI 152 >gi|32267053|ref|NP_861085.1| flagellar basal body-associated protein FliL [Helicobacter hepaticus ATCC 51449] gi|32263105|gb|AAP78151.1| flagellar basal body protein FliL [Helicobacter hepaticus ATCC 51449] gi|33321862|gb|AAQ06666.1| antigen P21Hh7 [Helicobacter hepaticus] Length = 196 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 12/98 (12%), Positives = 36/98 (36%), Gaps = 11/98 (11%) Query: 50 LVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK--------EIATDYLYTLLSGPPMGD 101 ++ ++ + Y + F ++ + ++ + D + +LS + D Sbjct: 100 PFTVNLMTQTG-KRYLKTSVQFELDKDEIKANATKAELDKKLPMVQDTIIEILSSKSIED 158 Query: 102 FVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 +K ++ +I + +N L +S++ E Sbjct: 159 VATVKGKN--RVKDEIVKRINEFLIDGQVSDIFFVEFV 194 >gi|116694518|ref|YP_728729.1| flagellar basal body-associated protein [Ralstonia eutropha H16] gi|113529017|emb|CAJ95364.1| flagellar basal body-associated protein [Ralstonia eutropha H16] Length = 163 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 46/145 (31%), Gaps = 9/145 (6%) Query: 3 KFLFSGIWISVVTLISFYM---LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59 + L G + VV L + L + + + + ++ ++ + Sbjct: 18 RLLLIGAGVLVVALGAGGFVLGSVLSNRQPAAPAAPAAPVVPPPIFVPLDAFTV-NLRSD 76 Query: 60 VLQAYFLVKLSFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFVQIK--AFGFDNLR 114 + LS V D + A + LLS D ++ D++R Sbjct: 77 DGDRFLHTGLSLKVADAETQARLAQYLPEARSRILLLLSARQPADLATVEGKRKLADDIR 136 Query: 115 KKIKEDLNSRLGSQFISEVLIDELN 139 I + S L +Q + +VL Sbjct: 137 DTISKPFASGLPAQRVLDVLFTSFV 161 >gi|88704281|ref|ZP_01101995.1| Flagellar basal body-associated protein FliL [Congregibacter litoralis KT71] gi|88701332|gb|EAQ98437.1| Flagellar basal body-associated protein FliL [Congregibacter litoralis KT71] Length = 170 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/134 (14%), Positives = 36/134 (26%), Gaps = 12/134 (8%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTN---IIKSELVSIPSVSNGVLQAYFLVKLSF 71 + L L D + V + + + E + + G Y ++ Sbjct: 38 GGGAAAFLLLSGGDEAEADAVEEVVEEAPKVPLYLDVEKLLVNLEYKGK-TRYVQAEMQL 96 Query: 72 IVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLG-- 126 + D L TL S G I+ LR + +N LG Sbjct: 97 MGYSQDAIDQASRDMPAIRDGLITLFSVQDFGALKTIEGKD--ALRADALKAVNQALGLT 154 Query: 127 -SQFISEVLIDELN 139 I ++ + Sbjct: 155 PPDGIEKIYFENFV 168 >gi|309388830|gb|ADO76710.1| flagellar basal body-associated protein FliL [Halanaerobium praevalens DSM 2228] Length = 150 Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/143 (13%), Positives = 45/143 (31%), Gaps = 9/143 (6%) Query: 1 MLKFLFSGIWISVVTLIS-FYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59 ML + + I + + S + + + E ++ ++ +N Sbjct: 11 MLALIVV-LVIIITGVASFTFFTYFSVSNDEKEEKEVQSIEDIRPTYEAGSYTVNISNNN 69 Query: 60 VLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 + + + F + S L + D + + L + + + Sbjct: 70 RIN-FIRATIVFELEKSDLAKELDKRTSQIRDRVISTLRSQNQEILEEPGSNTIKRI--- 125 Query: 117 IKEDLNSRLGSQFISEVLIDELN 139 +KE +N L S I+ V EL Sbjct: 126 VKEKINELLISGEITNVWFTELV 148 >gi|238025701|ref|YP_002909932.1| flagellar basal body-associated protein FliL [Burkholderia glumae BGR1] gi|237874895|gb|ACR27228.1| Flagellar protein FliL [Burkholderia glumae BGR1] Length = 166 Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 15/127 (11%), Positives = 33/127 (25%), Gaps = 9/127 (7%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER 79 + L H P + E +++ S+ Y + L+ + D + Sbjct: 40 WFFLLHREAPASAAHAAPPQLATPVFFPLESMTVNLQSDDDGLHYLRIGLTLKLTDPTAQ 99 Query: 80 SY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQ----FISE 132 Y + LS D + L +++ + + Sbjct: 100 DYLTQHMPEIRSRILLALSNKRPSDLATLDGK--RALADELRALIEKPTQPGNRSARVDA 157 Query: 133 VLIDELN 139 VL + Sbjct: 158 VLFTDFV 164 >gi|226944506|ref|YP_002799579.1| flagellar basal body-associated protein [Azotobacter vinelandii DJ] gi|226719433|gb|ACO78604.1| Flagellar basal body-associated protein [Azotobacter vinelandii DJ] Length = 162 Score = 52.0 bits (123), Expect = 4e-05, Method: Composition-based stats. Identities = 18/133 (13%), Positives = 36/133 (27%), Gaps = 11/133 (8%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTN--IIKSELVSIPSVSNGVLQAYFLVKLSFI 72 + Y L + ++ A + ++ + V LS Sbjct: 29 SAAGVYFLMNKGAHAGADSDAEAAAEPLPAPIFVPISPFTVNLRGEQREERLLYVGLSLQ 88 Query: 73 VNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQ- 128 V D +L L L + + + L KI E L + + Sbjct: 89 VTDKASEEFLKRYMPQLRSRLLKLFTAQTAAELMTPNGKD--QLSAKILEMLQQPMATPQ 146 Query: 129 ---FISEVLIDEL 138 +++VL + Sbjct: 147 PTLRVTDVLYTDF 159 >gi|189426343|ref|YP_001953520.1| flagellar basal body-associated protein FliL [Geobacter lovleyi SZ] gi|189422602|gb|ACD97000.1| flagellar basal body-associated protein FliL [Geobacter lovleyi SZ] Length = 183 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/163 (11%), Positives = 49/163 (30%), Gaps = 27/163 (16%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAI--------------------- 40 L + + +V + + D E A Sbjct: 21 LFIIIGAAALVLVIAGVVVFMMMGKGDKKKEGADAQGAPVAEGGHGAAPPAAGGGHGGAA 80 Query: 41 -KNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSG 96 + + S I ++ +G Y VK+ + + + L+ D + +L+ Sbjct: 81 APGVSTVFSLEPFIVNIYDGQELRYLKVKVELEMVSAAVKPELEGRLAAIRDAILVVLTT 140 Query: 97 PPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + + ++ LR++I ++ + +S+V + Sbjct: 141 KTLQEVQDVQGKN--QLREEILTAISKIVAQGKVSKVYFTDFV 181 >gi|153840565|ref|ZP_01993232.1| flagellar basal body-associated protein [Vibrio parahaemolyticus AQ3810] gi|149745773|gb|EDM56903.1| flagellar basal body-associated protein [Vibrio parahaemolyticus AQ3810] Length = 275 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/136 (11%), Positives = 35/136 (25%), Gaps = 9/136 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVP-----PLAIKNTNIIKSELVSIPSV 56 L + + + + + + S D+ A + I +V Sbjct: 18 LLIIIIAVVVLLGGGGAAAFFLMGSDDSAQAAEAESQQTQAAAANPIAYVNLPQPFIFNV 77 Query: 57 SNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 + +K +V S+ +++A + L+ F R Sbjct: 78 TGDRRDRLVQIKAQLMVRGSENEQLARDLAYAADLS-LALMNPTRVQNGLNFKLSAFRD- 135 Query: 117 IKEDLNSRLGSQFISE 132 G Q + + Sbjct: 136 --TTDQQYDGEQIVQD 149 >gi|323703178|ref|ZP_08114831.1| flagellar basal body-associated protein FliL [Desulfotomaculum nigrificans DSM 574] gi|323531837|gb|EGB21723.1| flagellar basal body-associated protein FliL [Desulfotomaculum nigrificans DSM 574] Length = 151 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 15/133 (11%), Positives = 43/133 (32%), Gaps = 13/133 (9%) Query: 13 VVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFI 72 V Y+ + + + P + + + + ++++ + + Sbjct: 22 AVFGAGGYIYLKSTNNDNKKTGPDPNKLMTFS---IGSLLV-NLADPGGANFMRLTPVLE 77 Query: 73 VNDSQERSYLKEIAT-------DYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL 125 D+++ L E T D + ++ + D ++ + ++K ++N L Sbjct: 78 YEDNKQNKKLAEELTKKKYVLQDAIIRVIRTKKIADVQPPQSIDKIAV--ELKNEVNKNL 135 Query: 126 GSQFISEVLIDEL 138 I V E Sbjct: 136 HEGQIYRVYFTEY 148 >gi|83312596|ref|YP_422860.1| flagellar basal body-associated protein [Magnetospirillum magneticum AMB-1] gi|82947437|dbj|BAE52301.1| Flagellar basal body-associated protein [Magnetospirillum magneticum AMB-1] Length = 181 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/136 (13%), Positives = 45/136 (33%), Gaps = 15/136 (11%) Query: 15 TLISFYMLFLRSMDTMVENHV----------PPLAIKNTNIIKSELVSIPSVSNGVLQAY 64 Y L T ++ PP A++ + + + + + G QA+ Sbjct: 44 AGAGVYFSGLLDKLTGKKDDHGATEAAAPPPPPKAVQAASFMDLPEMLVNLQTTGRKQAF 103 Query: 65 FLVKLSFIVN---DSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDL 121 ++++ + D + D L + D LR+++ + Sbjct: 104 LKLRVALELEAVTDQPRVEQMLPRIIDNFQIYLRELRVEDLQGASGMHL--LREELLTRV 161 Query: 122 NSRLGSQFISEVLIDE 137 N+ + +++VL E Sbjct: 162 NAAVKPVKVNDVLFKE 177 >gi|77464901|ref|YP_354405.1| hypothetical protein RSP_1323 [Rhodobacter sphaeroides 2.4.1] gi|77389319|gb|ABA80504.1| hypothetical protein RSP_1323 [Rhodobacter sphaeroides 2.4.1] Length = 95 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 6/90 (6%) Query: 54 PSVSNGVLQAYFLVKLSFIVNDSQERSYL--KEIATDYLYTLLSGPPMG---DFVQIKAF 108 P + +G + + ++ LS V + D + ++L +A Sbjct: 2 PIIEDGRVASMVILSLSLEVPPGGTEQVYAVEPKLRDGMLSVLFDHANAGGFRGAFTEAA 61 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 LR+ + E S LG I +VLI ++ Sbjct: 62 NLVALRRALLEVARSVLGPTAI-DVLITDI 90 >gi|144897830|emb|CAM74694.1| flagellar basal body-associated protein FliL [Magnetospirillum gryphiswaldense MSR-1] Length = 182 Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/110 (15%), Positives = 37/110 (33%), Gaps = 5/110 (4%) Query: 31 VENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN---DSQERSYLKEIAT 87 P AI + + + SNG QA+ + ++ + D + + Sbjct: 71 APKGDAPKAIGPAHFYNLPEMLVNLQSNGRKQAFLKILVALELESPLDEPKVQVVLPRIV 130 Query: 88 DYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 D L + D LR+++ + + + +++VL E Sbjct: 131 DSFQVYLRELRVEDLQGAAGMHL--LREELLTRVQAAVKPVKVNDVLFRE 178 >gi|296330845|ref|ZP_06873320.1| flagellar basal body-associated protein FliL [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305674363|ref|YP_003866035.1| flagellar basal-body associated protein [Bacillus subtilis subsp. spizizenii str. W23] gi|296151850|gb|EFG92724.1| flagellar basal body-associated protein FliL [Bacillus subtilis subsp. spizizenii ATCC 6633] gi|305412607|gb|ADM37726.1| flagellar basal-body associated protein [Bacillus subtilis subsp. spizizenii str. W23] Length = 141 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 46/128 (35%), Gaps = 9/128 (7%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN 74 L + L + + + E ++ S+ +++ + + + Sbjct: 18 ALGAAAYFVLGGKSEEKSEAKKSIDEIVASSVDVEEITTNLKSDNIIR----LAIKLETD 73 Query: 75 DSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFIS 131 + + L++ D + +LL+ + K + +K++KE LNS L + Sbjct: 74 SDKSKEELEKRDFQVKDAVISLLADTNANEIEGDKGK--ETFKKELKEKLNSYLQEGKVE 131 Query: 132 EVLIDELN 139 +V I N Sbjct: 132 KVYITSFN 139 >gi|332799186|ref|YP_004460685.1| flagellar basal body-associated protein FliL [Tepidanaerobacter sp. Re1] gi|332696921|gb|AEE91378.1| flagellar basal body-associated protein FliL [Tepidanaerobacter sp. Re1] Length = 152 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 27/127 (21%), Positives = 45/127 (35%), Gaps = 12/127 (9%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN 74 T Y + V + N E ++N + Y + L +++N Sbjct: 32 TSGVAYFVAKNIAG--NNKTVVEQSKSNITYDAGE-----FLTNLSDKGYIRLSLVYLLN 84 Query: 75 DSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFIS 131 + LK D ++ +L + G +NLRKKIKE LN L + I Sbjct: 85 SKDVENELKLKESEIRDKIFVILRSETYDSIKDSE--GMENLRKKIKESLNQILTNGSIV 142 Query: 132 EVLIDEL 138 +V + Sbjct: 143 DVYFTSI 149 >gi|119503671|ref|ZP_01625754.1| Flagellar basal body-associated protein [marine gamma proteobacterium HTCC2080] gi|119460733|gb|EAW41825.1| Flagellar basal body-associated protein [marine gamma proteobacterium HTCC2080] Length = 186 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 16/159 (10%), Positives = 40/159 (25%), Gaps = 24/159 (15%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN--------------IIK 47 + + I + + + + + + + D + + I Sbjct: 29 ILLIVGAILLLGIGIGAGFFVGNMTADEPDSAESAEVYEEEGEEDSDRKKKDDRHNIYIT 88 Query: 48 SELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQ 104 + NG Y ++ + + + + L L S D Sbjct: 89 VGKLLAAVEHNGS-TRYIQAEVDLVGYEKSVMDDAQHNVPALRNRLLLLFSSQNFDDVRT 147 Query: 105 IKAFGFDNLRKKIKEDLNSRLG----SQFISEVLIDELN 139 I + LR + + +N L + +V Sbjct: 148 IAGR--ERLRVESLKAVNDVLELGPKGDRVEDVYFTAFV 184 >gi|284007161|emb|CBA72443.1| flagellar basal body-associated protein FliL [Arsenophonus nasoniae] Length = 183 Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 13/140 (9%), Positives = 39/140 (27%), Gaps = 3/140 (2%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + ++ + I+ Y +L E+ ++ + E ++ + + Sbjct: 41 ILLTIMALFTLLSCFIAGYSWWLLQAKEQDEHQPEKRSLVIPVFMSLEPFTVNLIDDEKR 100 Query: 62 QAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 + ++ + + R L + K +++ +K Sbjct: 101 DRVLYIDITLRLTSEETRKRLHDFMPEVRSRILLSRQNATELATDTGKVHLMSEIKQVLK 160 Query: 119 EDLNSRLGSQFISEVLIDEL 138 Q I++VL Sbjct: 161 PTFELEESEQIITDVLFTTF 180 >gi|262273583|ref|ZP_06051397.1| flagellar biosynthesis protein FliL [Grimontia hollisae CIP 101886] gi|262222561|gb|EEY73872.1| flagellar biosynthesis protein FliL [Grimontia hollisae CIP 101886] Length = 140 Score = 51.2 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/131 (14%), Positives = 49/131 (37%), Gaps = 10/131 (7%) Query: 18 SFYMLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDS 76 + + L L + T + E ++ ++ G + V++ +V+D Sbjct: 11 AVFALILSLLVTFPSMASEEGNDTQFSYFTLEPEITTNFITEGRKLGFINVRVDLMVDDP 70 Query: 77 ---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQF 129 Q Y + + D + +LS + +++RK + +N+ L + Sbjct: 71 SLLQMLEYHQPLIRDAIIEMLSQENEVRIKSLSGR--ESIRKACLDKVNAMLLAETNQKV 128 Query: 130 ISEVLIDELNY 140 ++++L + Y Sbjct: 129 LTDLLFTKYLY 139 >gi|187926919|ref|YP_001893264.1| flagellar basal body-associated protein FliL [Ralstonia pickettii 12J] gi|241665248|ref|YP_002983607.1| flagellar basal body-associated protein FliL [Ralstonia pickettii 12D] gi|187728673|gb|ACD29837.1| flagellar basal body-associated protein FliL [Ralstonia pickettii 12J] gi|240867275|gb|ACS64935.1| flagellar basal body-associated protein FliL [Ralstonia pickettii 12D] Length = 164 Score = 51.2 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 37/132 (28%), Gaps = 9/132 (6%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN 74 + F + P K + E +++ Y V ++F Sbjct: 33 GMGGAAAWFFLGGANHTASASAPAKPKEPIFVAMETLTVNLQPEEGNDRYLQVGITFKSF 92 Query: 75 DSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSR---LGSQ 128 + + TLL+ + A G L K+I E +G + Sbjct: 93 NKHAEDEIKTYTPELRSRILTLLASKTPTELYP--AVGKAKLAKEIVEQCEQVYKAVGKE 150 Query: 129 F-ISEVLIDELN 139 +++VL Sbjct: 151 SPVADVLFTNFV 162 >gi|238920317|ref|YP_002933832.1| flagellar basal body-associated protein FliL [Edwardsiella ictaluri 93-146] gi|238869886|gb|ACR69597.1| flagellar basal body-associated protein, putative [Edwardsiella ictaluri 93-146] Length = 159 Score = 51.2 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 39/128 (30%), Gaps = 7/128 (5%) Query: 17 ISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSV-SNGVLQAYFLVKLSFIVND 75 Y + T ++ I + E ++ + +N V ++ + D Sbjct: 30 GGCYFGWHYYQQT-QQHTAKQAPIPQPVFMALEPFTVSLMSNNDDSDQVLYVGITLRLPD 88 Query: 76 S---QERSYLKEIATDYLYTLLSGPPMGDFV--QIKAFGFDNLRKKIKEDLNSRLGSQFI 130 + + L LLS Q K D ++ ++ + S Q + Sbjct: 89 EGTRKRLNDYLPEVRSRLLMLLSRQQAATLATEQGKKALMDEIKSTLRAPVVSGQPPQIV 148 Query: 131 SEVLIDEL 138 ++V+ Sbjct: 149 NDVMFTAF 156 >gi|209522292|ref|ZP_03270919.1| flagellar basal body-associated protein FliL [Burkholderia sp. H160] gi|209497268|gb|EDZ97496.1| flagellar basal body-associated protein FliL [Burkholderia sp. H160] Length = 167 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 18/125 (14%), Positives = 38/125 (30%), Gaps = 5/125 (4%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVND---S 76 + + R+ PP E +++ S+ Q + + L+ + D Sbjct: 41 FFMSKRAPVAASAEAAPPAPPAVPLFFPLESMTVNLQSDDGQQHFLRIGLTLKLGDAGTQ 100 Query: 77 QERSYLKEIATDYLYTLLSGPPMGDFVQIK--AFGFDNLRKKIKEDLNSRLGSQFISEVL 134 Q S + LS + ++ + L+ I E + + +VL Sbjct: 101 QVLSDHMPEVRSRILLALSNKHPDELAPLEGKRALAEELKTLISEPTDKGAAPIRVQDVL 160 Query: 135 IDELN 139 E Sbjct: 161 FTEFV 165 >gi|254785476|ref|YP_003072905.1| flagellar basal body-associated protein FliL [Teredinibacter turnerae T7901] gi|237687044|gb|ACR14308.1| flagellar basal body-associated protein FliL [Teredinibacter turnerae T7901] Length = 176 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 16/151 (10%), Positives = 42/151 (27%), Gaps = 13/151 (8%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN--------IIKSELVSI 53 + + G+ I+ +++ A + I Sbjct: 24 IMLVVLGLVIAGLSVGGTLAALKFLTPPPPAEEGAEDAAAEEPTPPPAPAIYFPIKPELI 83 Query: 54 PSVSNGVLQAYFLVKLSFIVNDSQE---RSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF 110 + + Q Y +L+ +V + + L L+ G + + + Sbjct: 84 VNFNVRGRQRYLQAELTLLVREEDVIAAIELHMSKIRNNLILLIGGEVYEELLTAEGKEL 143 Query: 111 DNLR--KKIKEDLNSRLGSQFISEVLIDELN 139 R ++++ + +G I +VL Sbjct: 144 LRQRCLQELQNVMLQEIGKPGIEQVLFTNFV 174 >gi|99082797|ref|YP_614951.1| hypothetical protein TM1040_2957 [Ruegeria sp. TM1040] gi|99039077|gb|ABF65689.1| hypothetical protein TM1040_2957 [Ruegeria sp. TM1040] Length = 169 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 37/120 (30%), Gaps = 7/120 (5%) Query: 26 SMDTMVENHVPPLAIKNTNIIKS-ELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL-- 82 + + E + IK IP V + A ++ LS Sbjct: 47 AGEDHSEAEEEEDPTEQNEFIKIKNQFVIPVVERDQMTAMVVLSLSLETKPGLSGKVHTY 106 Query: 83 KEIATDYLYTLLSGPPM---GDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + D +L ++ D LR ++E+ LG + +VLI ++ Sbjct: 107 EPKLRDVFLRVLFDHANMGGFRGAFTRSEILDPLRTSLREEARRFLGKDVV-DVLILDIT 165 >gi|330502772|ref|YP_004379641.1| flagellar basal body-associated protein FliL [Pseudomonas mendocina NK-01] gi|328917058|gb|AEB57889.1| flagellar basal body-associated protein FliL [Pseudomonas mendocina NK-01] Length = 172 Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/148 (11%), Positives = 41/148 (27%), Gaps = 10/148 (6%) Query: 2 LKFLFSGIWISV-VTLISFYMLF----LRSMDTMVENHVPPLAIKNTNIIKSELVSIPSV 56 + + G+ ++V +++ + + E + + + Sbjct: 23 IMLIVVGLLLAVGLSIGGTWFILSKGDKHEEAKPEEAAAAAPVRQPAIYQDLMPAFVVNF 82 Query: 57 SNGVLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQI--KAFGFD 111 + Y V ++ + D+ + + L LLSG K Sbjct: 83 NYQNRTRYLQVSMALMSRDAAGMEKLKVHMPVLRNRLVMLLSGQDFAALQTPLGKEMLLQ 142 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++E GS + +VL Sbjct: 143 QALASVQELAQKETGSTVVEQVLFTNFV 170 >gi|300854218|ref|YP_003779202.1| flagellar biosynthesis protein FliL [Clostridium ljungdahlii DSM 13528] gi|300434333|gb|ADK14100.1| flagellar biosynthesis protein FliL [Clostridium ljungdahlii DSM 13528] Length = 179 Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/98 (18%), Positives = 41/98 (41%), Gaps = 7/98 (7%) Query: 44 NIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMG 100 + + V++ ++++ Y V + ND + + L K I TD + +L Sbjct: 83 QTFQLDEVTV-NLADEGGNRYLKVAVYLGFNDKKLTAELTAKKPIVTDAVIEILRTKKAA 141 Query: 101 DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 D A +N++ +I + +N L ++ V ++ Sbjct: 142 DI---SAKNMNNIKLEIIQKINPMLEKGQLNNVYFTDI 176 >gi|16078693|ref|NP_389512.1| flagellar basal body-associated protein FliL [Bacillus subtilis subsp. subtilis str. 168] gi|221309508|ref|ZP_03591355.1| flagellar basal body-associated protein FliL [Bacillus subtilis subsp. subtilis str. 168] gi|221313832|ref|ZP_03595637.1| flagellar basal body-associated protein FliL [Bacillus subtilis subsp. subtilis str. NCIB 3610] gi|221318755|ref|ZP_03600049.1| flagellar basal body-associated protein FliL [Bacillus subtilis subsp. subtilis str. JH642] gi|221323027|ref|ZP_03604321.1| flagellar basal body-associated protein FliL [Bacillus subtilis subsp. subtilis str. SMY] gi|321315397|ref|YP_004207684.1| flagellar basal body-associated protein FliL [Bacillus subtilis BSn5] gi|120341|sp|P23452|FLIL_BACSU RecName: Full=Flagellar protein FliL gi|39913|emb|CAA39529.1| unnamed protein product [Bacillus subtilis subsp. subtilis str. 168] gi|2634002|emb|CAB13503.1| flagellar basal-body associated protein [Bacillus subtilis subsp. subtilis str. 168] gi|291484183|dbj|BAI85258.1| flagellar basal body-associated protein FliL [Bacillus subtilis subsp. natto BEST195] gi|320021671|gb|ADV96657.1| flagellar basal body-associated protein FliL [Bacillus subtilis BSn5] Length = 140 Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 16/132 (12%), Positives = 47/132 (35%), Gaps = 11/132 (8%) Query: 11 ISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLS 70 + + Y + + + + + E ++ S+ +++ + + Sbjct: 15 VIGALGAAAYFVLGGKSEKSEAKKSIDEIVA--SSVDVEEITTNLKSDNIIR----LAIK 68 Query: 71 FIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGS 127 + + + L++ D + +LL+ K + +K++K+ +NS L Sbjct: 69 LETDSDKSKEELEKRDFQVKDAVISLLADTNADQIEGDKGK--ETFKKELKDKINSYLQE 126 Query: 128 QFISEVLIDELN 139 + +V I N Sbjct: 127 GKVEKVYITSFN 138 >gi|269139493|ref|YP_003296194.1| flagellar basal body-associated protein [Edwardsiella tarda EIB202] gi|267985154|gb|ACY84983.1| flagellar basal body-associated protein [Edwardsiella tarda EIB202] gi|304559382|gb|ADM42046.1| Flagellar biosynthesis protein FliL [Edwardsiella tarda FL6-60] Length = 159 Score = 50.8 bits (120), Expect = 8e-05, Method: Composition-based stats. Identities = 18/128 (14%), Positives = 41/128 (32%), Gaps = 7/128 (5%) Query: 17 ISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ-AYFLVKLSFIVND 75 Y + T ++ V I + + ++ +SNG V ++ + D Sbjct: 30 GGGYFGWHYYQQT-QQHTVKQAPIPLPVFMALDPFTVNLLSNGDDSDRVLYVGITLRLPD 88 Query: 76 S---QERSYLKEIATDYLYTLLSGPPMGDFVQ--IKAFGFDNLRKKIKEDLNSRLGSQFI 130 + + L LLS K D ++ ++ + S +Q + Sbjct: 89 EGTRKRLNDYLPEVRSRLLMLLSRQQAATLASEQGKKALMDEIKSTLRAPVVSGQPAQMV 148 Query: 131 SEVLIDEL 138 ++V+ Sbjct: 149 NDVMFTAF 156 >gi|114046861|ref|YP_737411.1| flagellar basal body-associated protein FliL [Shewanella sp. MR-7] gi|113888303|gb|ABI42354.1| flagellar basal body-associated protein FliL [Shewanella sp. MR-7] Length = 175 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 19/152 (12%), Positives = 45/152 (29%), Gaps = 18/152 (11%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN---------IIKSELVSIP 54 F+ +G + +++ + + S + + T + + Sbjct: 24 FVGAGAFAALLIGGALWFFLGSSDEAPEAAAEGAAPTETTTPAADAAMAAYVPMPRPFLF 83 Query: 55 SVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFD 111 ++ +K+ +V +D + D L T SG + Sbjct: 84 NLPGPDRARLVEIKVQLMVRGQDDDVLTQKHIPLIEDALLTTFSGADVQKLSTQAGKD-- 141 Query: 112 NLRK----KIKEDLNSRLGSQFISEVLIDELN 139 LR+ ++ L S G + + +VL Sbjct: 142 ELRQLALLSVQNTLQSVTGRKVVEKVLFTGFV 173 >gi|52080233|ref|YP_079024.1| flagellar basal body-associated protein FliL [Bacillus licheniformis ATCC 14580] gi|52785610|ref|YP_091439.1| flagellar basal body-associated protein FliL [Bacillus licheniformis ATCC 14580] gi|319645988|ref|ZP_08000218.1| FliL protein [Bacillus sp. BT1B_CT2] gi|52003444|gb|AAU23386.1| flagellar protein [Bacillus licheniformis ATCC 14580] gi|52348112|gb|AAU40746.1| FliL [Bacillus licheniformis ATCC 14580] gi|317391738|gb|EFV72535.1| FliL protein [Bacillus sp. BT1B_CT2] Length = 143 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 18/140 (12%), Positives = 49/140 (35%), Gaps = 8/140 (5%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+ + + V + + + S +N P + + ++ ++ S+ V Sbjct: 9 MMTIILA----IAVLGTAAFFVIKGSASEKDQNAEPSIDEVVESSVEVAEITTNLKSDNV 64 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 ++ ++ + D + +LL+ + K + ++++KE Sbjct: 65 VRLSIKLETDSKEAKEEL-EKRDFQIKDSVISLLANTNADELEGQKGK--EKFKEQLKEK 121 Query: 121 LNS-RLGSQFISEVLIDELN 139 LN+ + + V I N Sbjct: 122 LNTNYMKEGKVKTVYITSFN 141 >gi|121997407|ref|YP_001002194.1| flagellar basal body-associated protein FliL [Halorhodospira halophila SL1] gi|121588812|gb|ABM61392.1| flagellar basal body-associated protein FliL [Halorhodospira halophila SL1] Length = 159 Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 13/132 (9%), Positives = 36/132 (27%), Gaps = 5/132 (3%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 G+ +++ T + + ++ ++ E ++ Sbjct: 17 LATLGLVLAMATGVFTPPGMTPEQPAESQQEPGEPDLEQARYVELEQPLTVNLDGDGPAQ 76 Query: 64 YFLVKLSFIVNDSQE---RSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 Y ++ + D L L+ + +LR++ E Sbjct: 77 YLEAEVEIAAASHAVTEAIETHQAAIRDELMLFLADQSFATLNSAEQRD--DLREEALER 134 Query: 121 LNSRLGSQFISE 132 +N+ L + E Sbjct: 135 VNTILNEHGVEE 146 >gi|332524240|ref|ZP_08400466.1| flagellar basal body-associated protein FliL [Rubrivivax benzoatilyticus JA2] gi|332107575|gb|EGJ08799.1| flagellar basal body-associated protein FliL [Rubrivivax benzoatilyticus JA2] Length = 197 Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 13/140 (9%), Positives = 44/140 (31%), Gaps = 17/140 (12%) Query: 4 FLFSGIWISVVTLISFYMLFLRSM-----------DTMVENHVPPLAIKNTNIIKSELVS 52 + G ++V+ + +FL + V + + + Sbjct: 25 LIIVGALVAVLAIGGGAAVFLLKKPHADTEEGAEDAEPAKAEVKHDPKSAPTFVPLDPFT 84 Query: 53 IPSVSNGVLQAYFLVKLSFIVNDSQE---RSYLKEIATDYLYTLLSGPPMGDFVQIKAFG 109 + ++++ + Y V ++ V D++ + + L+ D + Sbjct: 85 V-NLADRDAERYAQVGITLEVRDAKMGDTIKAYMPAIRNNILMALADKTAADLSDREGKA 143 Query: 110 FDNLRKKIKEDLNSRLGSQF 129 L ++++ + +G + Sbjct: 144 --KLAEQVRRETARAMGYEV 161 >gi|262404840|ref|ZP_06081394.1| flagellar biosynthesis protein FliL [Vibrio sp. RC586] gi|262348924|gb|EEY98063.1| flagellar biosynthesis protein FliL [Vibrio sp. RC586] Length = 136 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 46/128 (35%), Gaps = 10/128 (7%) Query: 21 MLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDSQ-- 77 ML L M + + P A E ++ + G Y V++ +V ++ Sbjct: 10 MLVLSLMLSFASHAEDPPAAPQLAYFTLEPDLTTNFFTKGNKLGYIQVRIDIMVANAADL 69 Query: 78 -ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISE 132 + + D + LL + ++LRK + LN+ L G I++ Sbjct: 70 PVVEQHQPLIRDAVVELLGKQTEDTIKSLAGR--EDLRKSLVNRLNNILLPEVGRTVIAD 127 Query: 133 VLIDELNY 140 +L + Y Sbjct: 128 LLFTKYIY 135 >gi|251779428|ref|ZP_04822348.1| flagellar basal body-associated protein FliL [Clostridium botulinum E1 str. 'BoNT E Beluga'] gi|243083743|gb|EES49633.1| flagellar basal body-associated protein FliL [Clostridium botulinum E1 str. 'BoNT E Beluga'] Length = 161 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/142 (9%), Positives = 45/142 (31%), Gaps = 9/142 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 +K + ++++ + V + + ++ ++++ Sbjct: 21 MKTIII-FVVALLLVGGGVFAGTYIFMQKNATTVVKEQSIDITYVDMGEMT-ANLADEGG 78 Query: 62 QAYFLVKLSFIVND-----SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 + YF ++S + E K + D + L + ++ + Sbjct: 79 KRYFKGQISIGYDKTDKDAETELKEKKVVVRDSIIFYLKSLKIDYINDTNNE--KEIKAQ 136 Query: 117 IKEDLNSRLGSQFISEVLIDEL 138 + + +N +L I +V D + Sbjct: 137 LMDRINKQLTKSKIVDVRFDSI 158 >gi|188588882|ref|YP_001920215.1| flagellar basal body-associated protein FliL [Clostridium botulinum E3 str. Alaska E43] gi|188499163|gb|ACD52299.1| flagellar basal body-associated protein FliL [Clostridium botulinum E3 str. Alaska E43] Length = 159 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/142 (9%), Positives = 45/142 (31%), Gaps = 9/142 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 +K + ++++ + V + + ++ ++++ Sbjct: 19 MKTIII-FVVALLLVGGGVFAGTYIFMQKNATTVVKEQSIDITYVDMGEMT-ANLADEGG 76 Query: 62 QAYFLVKLSFIVND-----SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 + YF ++S + E K + D + L + ++ + Sbjct: 77 KRYFKGQISIGYDKTDKDAETELKEKKVVVRDSIIFYLKSLKIDYINDTNNE--KEIKAQ 134 Query: 117 IKEDLNSRLGSQFISEVLIDEL 138 + + +N +L I +V D + Sbjct: 135 LMDRINKQLTKSKIVDVRFDSI 156 >gi|288573017|ref|ZP_06391374.1| flagellar basal body-associated protein FliL [Dethiosulfovibrio peptidovorans DSM 11002] gi|288568758|gb|EFC90315.1| flagellar basal body-associated protein FliL [Dethiosulfovibrio peptidovorans DSM 11002] Length = 151 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 18/153 (11%), Positives = 43/153 (28%), Gaps = 18/153 (11%) Query: 1 MLK----FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK-NTNIIKSELVSIPS 55 MLK + + Y + LR ++ I+ + Sbjct: 1 MLKRILLIAVIALIALALGAGGGYFMGLRFGAEERSVTGVSKDLERPGPIVDFGDFVVNL 60 Query: 56 VSNGVLQAYFLVKLSFIVNDSQERSYLKE-----IATDYLYTLLSGPPMGDFVQIKAFGF 110 +L+ + ++ + L + + + + + DF + G Sbjct: 61 --ADKEPHLVNFELALEASGTKAEAILTDGGWRSHIRNEVLLTVKDHIVDDFRSAE--GI 116 Query: 111 DNLRKKIKEDLNSRL----GSQFISEVLIDELN 139 L ++ +N+ L G + VL + Sbjct: 117 MELSDDMRRRINAILPSVDGKVAVRRVLFRKFV 149 >gi|241763649|ref|ZP_04761699.1| flagellar basal body-associated protein FliL [Acidovorax delafieldii 2AN] gi|241367124|gb|EER61490.1| flagellar basal body-associated protein FliL [Acidovorax delafieldii 2AN] Length = 188 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 19/133 (14%), Positives = 48/133 (36%), Gaps = 12/133 (9%) Query: 3 KFLFSGIWISV---VTLISFYMLFLRS---MDTMVENHVPPLAIKNTNIIKSELVSIPSV 56 K L G+ I++ + + L RS + A + E + + ++ Sbjct: 17 KLLVIGVVIALLVIAGAGAAWFLSSRSHAEEEDGAAPARKDAAKVVPTFLPMENMVV-NL 75 Query: 57 SNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113 ++ + + ++ V+D++ +K + L S + ++ G + L Sbjct: 76 ADPGGDRFAQIGITLEVSDAKTAEQIKQYLPSIRSGILLLASQRTSEEL--LQREGKEKL 133 Query: 114 RKKIKEDLNSRLG 126 I +++ LG Sbjct: 134 AADILREVSRPLG 146 >gi|224157700|ref|XP_002337883.1| predicted protein [Populus trichocarpa] gi|222869964|gb|EEF07095.1| predicted protein [Populus trichocarpa] Length = 284 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/126 (11%), Positives = 41/126 (32%), Gaps = 10/126 (7%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNT----NIIKSELVSIP-SVS 57 K + +G+ + + + + + P ++ II + + + + Sbjct: 24 KLVLAGVAVLALLGGGAFFFLKHGHKNDSQVAMTPKEMEKMIKAHPIIDLKPFVVNLNTA 83 Query: 58 NGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 + Y V+++F +++ Q + + + LL D LR Sbjct: 84 SAENSRYLKVRIAFKLDNPQVAKEVDYRMPEIQNIILILLGSETADDLGTTGGKL--ALR 141 Query: 115 KKIKED 120 +I+ Sbjct: 142 NQIRHR 147 >gi|154686047|ref|YP_001421208.1| flagellar basal body-associated protein FliL [Bacillus amyloliquefaciens FZB42] gi|154351898|gb|ABS73977.1| FliL [Bacillus amyloliquefaciens FZB42] Length = 139 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 15/125 (12%), Positives = 48/125 (38%), Gaps = 12/125 (9%) Query: 18 SFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQ 77 + Y + + + + + + ++ S+ +++ + + + ++ Sbjct: 22 AAYFVVSGHSGKDKKPTIDEVVAA---TVSVDDITTNLKSDSIIR----IGIKLETDSAK 74 Query: 78 ERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVL 134 + L++ D + ++L+ G+ K + ++ +KE +NS L + +V Sbjct: 75 AKEELEKRDFQVKDNIISILADTSAGEIEGDKGR--EAFKQSLKEKVNSYLQEGKVQKVY 132 Query: 135 IDELN 139 I N Sbjct: 133 ITSFN 137 >gi|83816250|ref|YP_446690.1| flagellar basal body-associated protein FliL [Salinibacter ruber DSM 13855] gi|83757644|gb|ABC45757.1| Flagellar basal body-associated protein FliL [Salinibacter ruber DSM 13855] Length = 204 Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 35/90 (38%), Gaps = 5/90 (5%) Query: 53 IPSVSNGVLQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFG 109 + + + Y + + F + + + +++ I D + LLS + + + Sbjct: 115 VVNPAGSRGNRYLAISVVFEMEAPKVKKEMEKKKVIIKDAVLRLLSERTVEELSDPERRD 174 Query: 110 FDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 NL+K ++E+ N L + + E Sbjct: 175 --NLKKALREEANGILSKGEVDRLYFTEFV 202 >gi|308173593|ref|YP_003920298.1| flagellar basal-body associated protein [Bacillus amyloliquefaciens DSM 7] gi|307606457|emb|CBI42828.1| flagellar basal-body associated protein [Bacillus amyloliquefaciens DSM 7] gi|328553475|gb|AEB23967.1| flagellar basal body-associated protein FliL [Bacillus amyloliquefaciens TA208] gi|328911734|gb|AEB63330.1| flagellar basal-body associated protein [Bacillus amyloliquefaciens LL3] Length = 139 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 16/125 (12%), Positives = 50/125 (40%), Gaps = 12/125 (9%) Query: 18 SFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQ 77 + Y + + D + + + + + ++ S+ +++ + + + ++ Sbjct: 22 AAYFVVSGNSDKDKKPTIDEVVAA---TVSVDDITTNLKSDSIIR----IGIKLETDSAK 74 Query: 78 ERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVL 134 + L++ D + ++L+ G+ K + ++ +KE +NS L + +V Sbjct: 75 AKEELEKRDFQVKDNIISILADTSAGEIEGDKGR--EAFKQSLKEKVNSYLQEGKVQKVY 132 Query: 135 IDELN 139 I N Sbjct: 133 ITSFN 137 >gi|182412237|ref|YP_001817303.1| flagellar basal body-associated protein FliL [Opitutus terrae PB90-1] gi|177839451|gb|ACB73703.1| flagellar basal body-associated protein FliL [Opitutus terrae PB90-1] Length = 200 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 17/91 (18%), Positives = 32/91 (35%), Gaps = 5/91 (5%) Query: 52 SIPSVSNGVLQAYFLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAF 108 + ++S + Y +D + + K TD +LS + D + A Sbjct: 110 MVVNLSGTMGTRYLKTSFLVTGSDPEIKSVFETNKARLTDVTLNVLSSLSLADLEEPGAK 169 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 LR+K+ N LG + +V + Sbjct: 170 NV--LREKLVSAYNQALGRKVAEQVYFSDFV 198 >gi|307731348|ref|YP_003908572.1| flagellar basal body-associated protein FliL [Burkholderia sp. CCGE1003] gi|307585883|gb|ADN59281.1| flagellar basal body-associated protein FliL [Burkholderia sp. CCGE1003] Length = 165 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 12/125 (9%), Positives = 33/125 (26%), Gaps = 9/125 (7%) Query: 22 LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERS- 80 F+ P + +++ S+ Q + + L+ + D + + Sbjct: 41 FFMSKRAPAATAAATPAPAPAPTFFPLDSMTVNLQSDDGQQHFLRIGLTLKLTDPKTQQE 100 Query: 81 --YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF----ISEVL 134 + LS + + L +++ + + +VL Sbjct: 101 LTEHMPEIRSRILLALSNHHPDELAPLDGK--RALATELRTLIEQPTDKGAAPIHVQDVL 158 Query: 135 IDELN 139 E Sbjct: 159 FTEFV 163 >gi|254458621|ref|ZP_05072046.1| flagellar basal body-associated protein FliL [Campylobacterales bacterium GD 1] gi|207084929|gb|EDZ62216.1| flagellar basal body-associated protein FliL [Campylobacterales bacterium GD 1] Length = 184 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 12/96 (12%), Positives = 34/96 (35%), Gaps = 6/96 (6%) Query: 47 KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFV 103 + ++ ++ + + Y V +S + + L + D + +L+ + + Sbjct: 90 PLDSFTV-NLKSDSGRRYLKVTMSLELEGEELSLELDKKAPVLRDRVIRILTSKSLEEIS 148 Query: 104 QIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 K + +I + LN+ + I + E Sbjct: 149 SKKGK--QKISDQIMDTLNAMISDGRIKGIYFTEFV 182 >gi|163794149|ref|ZP_02188122.1| Flagellar basal body-associated protein [alpha proteobacterium BAL199] gi|159180763|gb|EDP65282.1| Flagellar basal body-associated protein [alpha proteobacterium BAL199] Length = 175 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 19/130 (14%), Positives = 41/130 (31%), Gaps = 12/130 (9%) Query: 18 SFYMLFLRSMDTMVENHVPPLAIKNTNII-------KSELVSIPSVSNGVLQAYFLVKLS 70 + +ML L S A + + + + +NG + +K++ Sbjct: 44 AAFMLGLFSSPPPPPTEEEGHAPAPVAPVQQRAFFFEVPDLIVNLNTNGRKSTFLKIKIA 103 Query: 71 FIVN---DSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGS 127 + D + + D L + D + G LR+++ +N Sbjct: 104 LELEGPQDVDRINEVLPRIFDNFQVYLRELRVDDLN--GSAGMYRLREELLRRVNIAARP 161 Query: 128 QFISEVLIDE 137 + +VL E Sbjct: 162 IKVRDVLFKE 171 >gi|212634373|ref|YP_002310898.1| flagellar basal body-associated protein FliL [Shewanella piezotolerans WP3] gi|212555857|gb|ACJ28311.1| Flagellar basal body-associated protein FliL [Shewanella piezotolerans WP3] Length = 172 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 14/151 (9%) Query: 3 KFLFSG--IWISVVTLISFYMLFLRSMDTMVE-------NHVPPLAIKNTNIIKSELVSI 53 K + G + +V + + L L +T E V + + Sbjct: 20 KLILFGSIAAVLIVIIAATLWLLLSGDETAAENSGGEAVAEVKASDKREAFYAAMPRPFL 79 Query: 54 PSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF 110 ++ +K+ +V +D + D L T SG + + Sbjct: 80 FNLPGNGRTRLVEIKVQLMVRGKDDDVLIKKHIPLIEDALLTTFSGADVQKLSTLAGKDE 139 Query: 111 DNLRK--KIKEDLNSRLGSQFISEVLIDELN 139 L ++ L +G + + +VL Sbjct: 140 LRLLALLNVQNTLQPIIGRKVVEKVLFTGFV 170 >gi|225620316|ref|YP_002721573.1| putative flagellar basal body-associated protein [Brachyspira hyodysenteriae WA1] gi|225215135|gb|ACN83869.1| putative flagellar basal body-associated protein [Brachyspira hyodysenteriae WA1] Length = 181 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 20/142 (14%), Positives = 50/142 (35%), Gaps = 9/142 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENH--VPPLAIKNTNIIKSELVSIPSVSNGVL 61 + + LI+F++ V+ + +I + + + ++ + Sbjct: 39 IAAILVVALISGLIAFFVSKSVGKAAGVQGGVVDDMVKQPPPSIYRIDPEFNVNTADMDV 98 Query: 62 QAYFLVKLSFIVNDSQERSYLK-----EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 Y V + + ++ ++ + D + T+LS + + L+ Sbjct: 99 ARYVKVSIILTYTTNTKQLAVELPERFYMIRDRITTILSSYTYDQLRTNEGR--EQLKAD 156 Query: 117 IKEDLNSRLGSQFISEVLIDEL 138 IK ++NS L + I +L D Sbjct: 157 IKREINSMLRNGQIDGILFDNF 178 >gi|292493591|ref|YP_003529030.1| flagellar basal body-associated protein FliL [Nitrosococcus halophilus Nc4] gi|291582186|gb|ADE16643.1| flagellar basal body-associated protein FliL [Nitrosococcus halophilus Nc4] Length = 172 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 24/149 (16%), Positives = 43/149 (28%), Gaps = 16/149 (10%) Query: 4 FLFSGIWISVVT--LISFYMLFLR---SMDTMVENHVPPLAIKNTNIIKSELVSIPSVSN 58 L S I + VV + L T P + + + Sbjct: 23 ILISTIVMLVVAIAVGVVLFLTGALTPKAATGEAAANPKAPQHPAIYHSLDPAFVVNFYR 82 Query: 59 GVLQ--AYFLVKLSFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113 Q + VK+ + DS+ + L LLS ++ G L Sbjct: 83 QSQQQVRFLQVKMEAMARDSEIIEAIKTHTPAIRNNLLLLLSHQDYETIHTVEGKG--QL 140 Query: 114 RKKIKEDLNSRL----GSQFISEVLIDEL 138 R+ ++++N L G + + V Sbjct: 141 REAARDEINQVLEDQAGIKGVEAVYFTSF 169 >gi|220924580|ref|YP_002499882.1| flagellar basal body-associated protein FliL [Methylobacterium nodulans ORS 2060] gi|219949187|gb|ACL59579.1| flagellar basal body-associated protein FliL [Methylobacterium nodulans ORS 2060] Length = 221 Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 15/119 (12%), Positives = 33/119 (27%), Gaps = 7/119 (5%) Query: 26 SMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG--VLQAYFLVKLSFIVNDSQER---S 80 + + + S+ + +K++ V D++ Sbjct: 103 KSRAAHAEKQAAETKAPVAFMDLREMVMNLTSDIGQSQTRFIKLKVALEVRDAKVAAEIQ 162 Query: 81 YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 L D + DF + G LR+++ +N + + VL E Sbjct: 163 PLMPRVEDAFQVYIRELRPTDFE--GSMGTYRLREELLRRVNVAVYPAKVDAVLFKEFV 219 >gi|323498066|ref|ZP_08103072.1| flagellar basal body-associated protein FliL-like protein [Vibrio sinaloensis DSM 21326] gi|323316874|gb|EGA69879.1| flagellar basal body-associated protein FliL-like protein [Vibrio sinaloensis DSM 21326] Length = 135 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 21/127 (16%), Positives = 43/127 (33%), Gaps = 10/127 (7%) Query: 22 LFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDSQ--- 77 + ++ + A+ E ++ + G Y V++ +V Sbjct: 10 FVVWALLMSLPASAEEEAVPQLAYFTLEPDLTTNFYTKGNKLGYIQVRIDIMVAAEADLA 69 Query: 78 ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEV 133 + + D + LL + ++LRK + E LNS L G I+++ Sbjct: 70 VIELHQPLIRDAVIELLGQQSEDTITSLAGR--EDLRKTLVEQLNSILLPETGKTIIADL 127 Query: 134 LIDELNY 140 L + Y Sbjct: 128 LFTKYLY 134 >gi|294508626|ref|YP_003572685.1| flagellar protein FliL [Salinibacter ruber M8] gi|294344955|emb|CBH25733.1| flagellar protein FliL [Salinibacter ruber M8] Length = 136 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 35/90 (38%), Gaps = 5/90 (5%) Query: 53 IPSVSNGVLQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFG 109 + + + Y + + F + + + +++ I D + LLS + + + Sbjct: 47 VVNPAGSRGNRYLAISVVFEMEAPKVKKEMEKKKVIIKDAVLRLLSERTVEELSDPERRD 106 Query: 110 FDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 NL+K ++E+ N L + + E Sbjct: 107 --NLKKALREEANGILSKGEVDRLYFTEFV 134 >gi|28211320|ref|NP_782264.1| putative flagellar protein fliL [Clostridium tetani E88] gi|28203760|gb|AAO36201.1| putative flagellar protein fliL [Clostridium tetani E88] Length = 170 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 14/90 (15%), Positives = 35/90 (38%), Gaps = 6/90 (6%) Query: 52 SIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAF 108 + ++S+ + + ++ + + L+ I D + ++L DF + Sbjct: 81 FLVNLSDEEGRRFVKTRIHLGYENKRLAKELEKKKPIILDTINSVLRSKKSTDFNE---K 137 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 G D ++ +I +N+ + V EL Sbjct: 138 GVDKIKLEILNRVNTAFQNGRCETVYFTEL 167 >gi|326791531|ref|YP_004309352.1| flagellar basal body-associated protein FliL [Clostridium lentocellum DSM 5427] gi|326542295|gb|ADZ84154.1| flagellar basal body-associated protein FliL [Clostridium lentocellum DSM 5427] Length = 155 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/148 (12%), Positives = 47/148 (31%), Gaps = 13/148 (8%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSV--SNG 59 L + + + + + S + + + ++ N + + ++ Sbjct: 7 LFVIIAIVVLGISIAASTFFVLKQMNESSNGQTAATEKELNLTEVSMGDAIMTNIAIGED 66 Query: 60 VLQAYFLVKLSFIVNDSQERSYLK---------EIATDYLYTLLSGPPMGDFVQIKAFGF 110 +Q + +K+S V+ S +++Y + L ++ Sbjct: 67 AVQHFAKIKISLGVDASDKKAYEAFTNAVTNQAASMRNELIAVIGEQTYTMLKANDGKA- 125 Query: 111 DNLRKKIKEDLNSRLGSQFISEVLIDEL 138 L +I LN L + I +V +E Sbjct: 126 -KLADEIVARLNKLLSTDIIYDVYYEEY 152 >gi|296126962|ref|YP_003634214.1| flagellar basal body-associated protein FliL [Brachyspira murdochii DSM 12563] gi|296018778|gb|ADG72015.1| flagellar basal body-associated protein FliL [Brachyspira murdochii DSM 12563] Length = 182 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 50/150 (33%), Gaps = 14/150 (9%) Query: 1 MLKFLFSGIWISVV-----TLISFYMLFLRSMDTMVENH--VPPLAIKNTNIIKSELVSI 53 M+ + G+ +V LI+F++ V+ + +I + + Sbjct: 32 MIVKILMGVAAILVVALISGLIAFFVSKSVGKAAGVQGGVVDDMVKQPPPSIYRIDPEFN 91 Query: 54 PSVSNGVLQAYFLVKLSFIVN---DSQERSYLKEI--ATDYLYTLLSGPPMGDFVQIKAF 108 + ++ + Y V + + D + T+LS + Sbjct: 92 VNTADMDVARYVKVSIILTYTTNVKQLAVELPERFYMIRDRITTILSSYTYDQLRTNEGR 151 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + L+ IK ++NS L + I +L D Sbjct: 152 --EQLKADIKREINSMLRNGQIDGILFDNF 179 >gi|258623126|ref|ZP_05718138.1| flagellar protein FliL, putative [Vibrio mimicus VM573] gi|258626616|ref|ZP_05721446.1| flagellar protein FliL, putative [Vibrio mimicus VM603] gi|262172860|ref|ZP_06040538.1| flagellar biosynthesis protein FliL [Vibrio mimicus MB-451] gi|258581120|gb|EEW06039.1| flagellar protein FliL, putative [Vibrio mimicus VM603] gi|258584609|gb|EEW09346.1| flagellar protein FliL, putative [Vibrio mimicus VM573] gi|261893936|gb|EEY39922.1| flagellar biosynthesis protein FliL [Vibrio mimicus MB-451] Length = 127 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 24/128 (18%), Positives = 47/128 (36%), Gaps = 10/128 (7%) Query: 21 MLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDSQ-- 77 ML L M + + P A+ E ++ + G Y V++ +V ++ Sbjct: 1 MLALSLMLSFASHAEDPPAVPQLAYFTLEPDLTTNFFTKGNKLGYIQVRIDIMVANAADL 60 Query: 78 -ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISE 132 + + D + LL + ++LRK + LN+ L G I++ Sbjct: 61 PVIEKHQPLIRDAVVELLGKQTEDTIKSLAGR--EDLRKSLVSRLNNILLPEIGRTVIAD 118 Query: 133 VLIDELNY 140 +L + Y Sbjct: 119 LLFTKYIY 126 >gi|187925746|ref|YP_001897388.1| flagellar basal body-associated protein FliL [Burkholderia phytofirmans PsJN] gi|187716940|gb|ACD18164.1| flagellar basal body-associated protein FliL [Burkholderia phytofirmans PsJN] Length = 166 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 12/128 (9%), Positives = 35/128 (27%), Gaps = 9/128 (7%) Query: 19 FYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQE 78 + + P E +++ S+ Q + + L+ + D++ Sbjct: 39 VWFFMSKRAPAATSAEAAPPPAPAPLFFPLESMTVNLQSDDGQQHFLRIGLTLKLTDAKT 98 Query: 79 RSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF----IS 131 + + LS + ++ L +++ + + Sbjct: 99 QQELTDHMPEVRSRILLALSNKHPDELAPLEGK--RALATELRTLIEQPTDKGAAPIHVQ 156 Query: 132 EVLIDELN 139 +VL E Sbjct: 157 DVLFTEFV 164 >gi|295696123|ref|YP_003589361.1| flagellar basal body-associated protein FliL [Bacillus tusciae DSM 2912] gi|295411725|gb|ADG06217.1| flagellar basal body-associated protein FliL [Bacillus tusciae DSM 2912] Length = 147 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 43/130 (33%), Gaps = 9/130 (6%) Query: 10 WISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSE-LVSIPSVSNGVLQAYFLVK 68 W +V L + + + P + + + +++ G + Sbjct: 17 WALIVVLAAAVGVGAWYVIGSRATSSGPPTAADLAKTRYDLPQMTTNLAGGSV---IQFS 73 Query: 69 LSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL 125 +S + Q + L+ D + +L D Q + + L+ I + +N L Sbjct: 74 VSLQASSDQAKGELELRKVEIQDAVNDILHSWKREDLDQPRGQ--EKLKGDIMKRVNELL 131 Query: 126 GSQFISEVLI 135 + +++V Sbjct: 132 HNGRVTQVYF 141 >gi|269792933|ref|YP_003317837.1| flagellar basal body-associated protein FliL [Thermanaerovibrio acidaminovorans DSM 6589] gi|269100568|gb|ACZ19555.1| flagellar basal body-associated protein FliL [Thermanaerovibrio acidaminovorans DSM 6589] Length = 149 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 13/144 (9%), Positives = 45/144 (31%), Gaps = 18/144 (12%) Query: 6 FSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYF 65 G+ + ++ + + + + + + +I ++++ Sbjct: 10 VIGVVVLLLGIGGG---VMVGLKFFGSDKPEEKLLPPGPTVSLGSFTI-NLADPEPH-LI 64 Query: 66 LVKLSFIVNDSQERSYLKE-----IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 + ++ + D + + L + + + + D + L + ++ Sbjct: 65 QLGVTLELEDQETATMLADPGWMSRIKNEVILTVKDRRYDDLKSSEGAQI--LAQDLRGK 122 Query: 121 LNSRLGSQF------ISEVLIDEL 138 LNS L + +VL D+ Sbjct: 123 LNSILPRTKKTRKVPVRQVLFDQF 146 >gi|15640129|ref|NP_229756.1| flagellar basal body-associated protein FliL-like protein [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121591576|ref|ZP_01678832.1| flagellar protein FliL, putative [Vibrio cholerae 2740-80] gi|121727776|ref|ZP_01680852.1| flagellar protein FliL, putative [Vibrio cholerae V52] gi|147673890|ref|YP_001218319.1| flagellar basal body-associated protein FliL-like protein [Vibrio cholerae O395] gi|153818204|ref|ZP_01970871.1| flagellar protein FliL, putative [Vibrio cholerae NCTC 8457] gi|153824038|ref|ZP_01976705.1| flagellar protein FliL, putative [Vibrio cholerae B33] gi|153826618|ref|ZP_01979285.1| flagellar protein FliL, putative [Vibrio cholerae MZO-2] gi|227080333|ref|YP_002808884.1| putative flagellar protein FliL [Vibrio cholerae M66-2] gi|229508380|ref|ZP_04397884.1| flagellar biosynthesis protein FliL [Vibrio cholerae BX 330286] gi|229508939|ref|ZP_04398429.1| flagellar biosynthesis protein FliL [Vibrio cholerae B33] gi|229515864|ref|ZP_04405322.1| flagellar biosynthesis protein FliL [Vibrio cholerae TMA 21] gi|229517053|ref|ZP_04406499.1| flagellar biosynthesis protein FliL [Vibrio cholerae RC9] gi|229520105|ref|ZP_04409533.1| flagellar biosynthesis protein FliL [Vibrio cholerae TM 11079-80] gi|229606654|ref|YP_002877302.1| flagellar basal body-associated protein FliL-like protein [Vibrio cholerae MJ-1236] gi|254225612|ref|ZP_04919221.1| flagellar protein FliL, putative [Vibrio cholerae V51] gi|254291841|ref|ZP_04962625.1| flagellar protein FliL, putative [Vibrio cholerae AM-19226] gi|254851482|ref|ZP_05240832.1| flagellar basal body-associated protein FliL-like protein [Vibrio cholerae MO10] gi|255743944|ref|ZP_05417899.1| flagellar biosynthesis protein FliL [Vibrio cholera CIRS 101] gi|262151319|ref|ZP_06028453.1| flagellar biosynthesis protein FliL [Vibrio cholerae INDRE 91/1] gi|262167238|ref|ZP_06034949.1| flagellar biosynthesis protein FliL [Vibrio cholerae RC27] gi|262192235|ref|ZP_06050393.1| flagellar biosynthesis protein FliL [Vibrio cholerae CT 5369-93] gi|297581856|ref|ZP_06943777.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|298501128|ref|ZP_07010928.1| flagellar basal body-associated protein FliL [Vibrio cholerae MAK 757] gi|9654495|gb|AAF93275.1| flagellar protein FliL, putative [Vibrio cholerae O1 biovar El Tor str. N16961] gi|121546569|gb|EAX56768.1| flagellar protein FliL, putative [Vibrio cholerae 2740-80] gi|121629900|gb|EAX62312.1| flagellar protein FliL, putative [Vibrio cholerae V52] gi|125621932|gb|EAZ50257.1| flagellar protein FliL, putative [Vibrio cholerae V51] gi|126511233|gb|EAZ73827.1| flagellar protein FliL, putative [Vibrio cholerae NCTC 8457] gi|126518441|gb|EAZ75664.1| flagellar protein FliL, putative [Vibrio cholerae B33] gi|146315773|gb|ABQ20312.1| putative flagellar protein FliL [Vibrio cholerae O395] gi|149739556|gb|EDM53780.1| flagellar protein FliL, putative [Vibrio cholerae MZO-2] gi|150422277|gb|EDN14240.1| flagellar protein FliL, putative [Vibrio cholerae AM-19226] gi|227008221|gb|ACP04433.1| putative flagellar protein FliL [Vibrio cholerae M66-2] gi|227011901|gb|ACP08111.1| putative flagellar protein FliL [Vibrio cholerae O395] gi|229342893|gb|EEO07883.1| flagellar biosynthesis protein FliL [Vibrio cholerae TM 11079-80] gi|229346116|gb|EEO11088.1| flagellar biosynthesis protein FliL [Vibrio cholerae RC9] gi|229347127|gb|EEO12088.1| flagellar biosynthesis protein FliL [Vibrio cholerae TMA 21] gi|229354056|gb|EEO18989.1| flagellar biosynthesis protein FliL [Vibrio cholerae B33] gi|229354653|gb|EEO19575.1| flagellar biosynthesis protein FliL [Vibrio cholerae BX 330286] gi|229369309|gb|ACQ59732.1| flagellar biosynthesis protein FliL [Vibrio cholerae MJ-1236] gi|254847187|gb|EET25601.1| flagellar basal body-associated protein FliL-like protein [Vibrio cholerae MO10] gi|255738427|gb|EET93817.1| flagellar biosynthesis protein FliL [Vibrio cholera CIRS 101] gi|262024302|gb|EEY42992.1| flagellar biosynthesis protein FliL [Vibrio cholerae RC27] gi|262030858|gb|EEY49488.1| flagellar biosynthesis protein FliL [Vibrio cholerae INDRE 91/1] gi|262031908|gb|EEY50488.1| flagellar biosynthesis protein FliL [Vibrio cholerae CT 5369-93] gi|297533950|gb|EFH72790.1| conserved hypothetical protein [Vibrio cholerae RC385] gi|297540162|gb|EFH76223.1| flagellar basal body-associated protein FliL [Vibrio cholerae MAK 757] gi|327483003|gb|AEA77410.1| Flagellar biosynthesis protein FliL [Vibrio cholerae LMA3894-4] Length = 136 Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 10/128 (7%) Query: 21 MLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDSQ-- 77 ML L + + A+ E ++ + G Y V++ +V ++ Sbjct: 10 MLALSFIVPFHSHAEEKSAVPQLAYFTLEPDLTTNFFTKGNKLGYIQVRIDIMVANAADL 69 Query: 78 -ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISE 132 + + D + LL + ++LRK + LN+ L G I++ Sbjct: 70 PVVEQHQPLIRDAVVELLGKQTEDTIKSLAGR--EDLRKSLVNRLNNILLPEVGRTVIAD 127 Query: 133 VLIDELNY 140 +L + Y Sbjct: 128 LLFTKYIY 135 >gi|329849712|ref|ZP_08264558.1| flagellar fliL protein [Asticcacaulis biprosthecum C19] gi|328841623|gb|EGF91193.1| flagellar fliL protein [Asticcacaulis biprosthecum C19] Length = 212 Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 20/116 (17%), Positives = 33/116 (28%), Gaps = 6/116 (5%) Query: 25 RSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDS---QERSY 81 +D + + T + S +Y +KL+F D Sbjct: 96 AKVDPKTQPVLSEGP-DGTTYLTLPDTVANIQSADGRSSYLKLKLTFECADEETADMVKE 154 Query: 82 LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 D L + D LR +I +N L I+ VLI++ Sbjct: 155 NLPRVNDILQGFIRELRPEDLKGSAGN--HQLRLEILRRINLVLAPHKINAVLIEQ 208 >gi|229524998|ref|ZP_04414403.1| flagellar biosynthesis protein FliL [Vibrio cholerae bv. albensis VL426] gi|229338579|gb|EEO03596.1| flagellar biosynthesis protein FliL [Vibrio cholerae bv. albensis VL426] Length = 136 Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 10/128 (7%) Query: 21 MLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDSQ-- 77 ML L + + A+ E ++ + G Y V++ +V ++ Sbjct: 10 MLALSFIVPFHSHAEEKSAVPQLAYFTLEPDLTTNFFTKGNKLGYIQVRIDIMVANAADI 69 Query: 78 -ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISE 132 + + D + LL + ++LRK + LN+ L G I++ Sbjct: 70 PVVEQHQPLIRDAVVELLGKQTEDTIKSLAGR--EDLRKSLVNRLNNILLPEVGRTVIAD 127 Query: 133 VLIDELNY 140 +L + Y Sbjct: 128 LLFTKYIY 135 >gi|167645398|ref|YP_001683061.1| flagellar basal body-associated protein FliL [Caulobacter sp. K31] gi|167347828|gb|ABZ70563.1| flagellar basal body-associated protein FliL [Caulobacter sp. K31] Length = 203 Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 31/104 (29%), Gaps = 5/104 (4%) Query: 37 PLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTL 93 + + + + +KL+F + D + L D T Sbjct: 98 KEGPDGVVFYTLPDIVVNMQAADGRSTFLKLKLTFELPDEETAENLTPNLPRLQDMFQTF 157 Query: 94 LSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 L D + LR ++ +N ++ VLI+E Sbjct: 158 LRELRPEDLNGSQGS--YQLRAELLRRVNLVAAPSKVNAVLIEE 199 >gi|153214611|ref|ZP_01949487.1| flagellar protein FliL, putative [Vibrio cholerae 1587] gi|229527156|ref|ZP_04416550.1| flagellar biosynthesis protein FliL [Vibrio cholerae 12129(1)] gi|124115217|gb|EAY34037.1| flagellar protein FliL, putative [Vibrio cholerae 1587] gi|229335387|gb|EEO00870.1| flagellar biosynthesis protein FliL [Vibrio cholerae 12129(1)] Length = 136 Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 10/128 (7%) Query: 21 MLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDSQ-- 77 ML L + + A+ E ++ + G Y V++ +V ++ Sbjct: 10 MLALSFIIPFHSHAEEKSAVPQLAYFTLEPDLTTNFFTKGNKLGYIQVRIDIMVANAADL 69 Query: 78 -ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISE 132 + + D + LL + ++LRK + LN+ L G I++ Sbjct: 70 PVVEQHQPLIRDAVVELLGKQTEDTIKSLAGR--EDLRKSLVNRLNNILLPEVGRTVIAD 127 Query: 133 VLIDELNY 140 +L + Y Sbjct: 128 LLFTKYIY 135 >gi|71281246|ref|YP_268250.1| flagellar basal body-associated protein FliL [Colwellia psychrerythraea 34H] gi|71146986|gb|AAZ27459.1| flagellar protein FliL [Colwellia psychrerythraea 34H] Length = 184 Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 13/155 (8%), Positives = 40/155 (25%), Gaps = 25/155 (16%) Query: 8 GIWISVVTLISFYMLFLRSMDTMVENH----------------VPPLAIKNTNIIKSELV 51 + + + Y F+ +D + + + Sbjct: 30 AVVVLLGGGAGAYFFFMGGVDNSASQAELDTALDSDSGEVTKVESGAQLGSALYVPMPRP 89 Query: 52 SIPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAF 108 +V + +++ +V ++ + + L + S D Sbjct: 90 FRFNVPGAARDRFVEIRVQLLVRGGDNEENAKMHIPLIESTLLDIFSQANADDLATSAGK 149 Query: 109 GFDNLRKKIKEDLNSRL----GSQFISEVLIDELN 139 +L++K + + G + + +VL Sbjct: 150 --VSLKQKSLAAVQKIMTDIEGDKTVEKVLFTGFV 182 >gi|71737943|ref|YP_275532.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. phaseolicola 1448A] gi|257484907|ref|ZP_05638948.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. tabaci ATCC 11528] gi|289629024|ref|ZP_06461978.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. aesculi str. NCPPB3681] gi|289651614|ref|ZP_06482957.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. aesculi str. 2250] gi|298487825|ref|ZP_07005865.1| Flagellar biosynthesis protein fliL [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|71558496|gb|AAZ37707.1| flagellar protein FliL [Pseudomonas syringae pv. phaseolicola 1448A] gi|298157550|gb|EFH98630.1| Flagellar biosynthesis protein fliL [Pseudomonas savastanoi pv. savastanoi NCPPB 3335] gi|330866454|gb|EGH01163.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. aesculi str. 0893_23] gi|330986498|gb|EGH84601.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. lachrymans str. M301315] gi|331011073|gb|EGH91129.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. tabaci ATCC 11528] Length = 166 Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/133 (12%), Positives = 37/133 (27%), Gaps = 7/133 (5%) Query: 14 VTLISFYMLFLRSMDTMVENHVPPLAIKNTN--IIKSELVSIPSVSNGVLQAYFLVKLSF 71 +++ + + L +S T A + + ++ Q Y V ++ Sbjct: 32 LSVGATWFLMHKSESTPDPAAAAAAANVKPVAVFEPMTPAFVVNFNSNGRQRYMQVSITM 91 Query: 72 IVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF--DNLRKKIKEDLNSRLG 126 + ++ + + L L + P I+E LG Sbjct: 92 LARNAADMEALKAHMPLIRNNLVMLFAAIPFESLASPIGQEMLRQKATASIQEVAQKELG 151 Query: 127 SQFISEVLIDELN 139 I ++L Sbjct: 152 KTVIEQLLFTNFV 164 >gi|154253005|ref|YP_001413829.1| flagellar basal body-associated protein FliL [Parvibaculum lavamentivorans DS-1] gi|154156955|gb|ABS64172.1| flagellar basal body-associated protein FliL [Parvibaculum lavamentivorans DS-1] Length = 167 Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 19/127 (14%), Positives = 40/127 (31%), Gaps = 8/127 (6%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN 74 + YM + + E +A + ++S Q Y ++++ V Sbjct: 43 AGVGVYMSGI--LGGTSEEEHAVVAAPAPVFYDLPDFLV-NLSGPPPQHYLKLRVALEVP 99 Query: 75 DSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFIS 131 + D T L D + G NL++++ L ++ Sbjct: 100 SKETVARLEAEMPRVLDGFQTFLRELRPEDLE--GSQGMLNLKEELMRRLALATQEPLVT 157 Query: 132 EVLIDEL 138 +VL E+ Sbjct: 158 DVLFKEI 164 >gi|323341376|ref|ZP_08081620.1| flagellar protein FliL [Lactobacillus ruminis ATCC 25644] gi|323091253|gb|EFZ33881.1| flagellar protein FliL [Lactobacillus ruminis ATCC 25644] Length = 178 Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/145 (11%), Positives = 45/145 (31%), Gaps = 11/145 (7%) Query: 5 LFSGIWISVVTLI---SFYMLFLRSMDTMVENHVPPLAI---KNTNIIKSELVSIPS-VS 57 L + I + + L ++ + ++ + Sbjct: 33 LIVILTICGSVGGTVLATHFLAPKTEQASSSAKRNAGTGKLSDDEKLVSVPKFVVNLATD 92 Query: 58 NGVLQAYFLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 + Y +K+S +V + + + D + ++ D + + L+ Sbjct: 93 DPANTQYARLKISVLVENDDKAAEAKKNMAVIRDAVINVMKKKKAADILS-NSGSVTALK 151 Query: 115 KKIKEDLNSRLGSQFISEVLIDELN 139 ++K+ +N LG +V + +L Sbjct: 152 NELKDGINEELGETLAIQVYVTDLV 176 >gi|153801701|ref|ZP_01956287.1| flagellar protein FliL, putative [Vibrio cholerae MZO-3] gi|153829077|ref|ZP_01981744.1| putative flagellar protein FliL [Vibrio cholerae 623-39] gi|124122794|gb|EAY41537.1| flagellar protein FliL, putative [Vibrio cholerae MZO-3] gi|148875405|gb|EDL73540.1| putative flagellar protein FliL [Vibrio cholerae 623-39] Length = 136 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 22/128 (17%), Positives = 45/128 (35%), Gaps = 10/128 (7%) Query: 21 MLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDSQ-- 77 ML L + + A+ E ++ + G Y V++ +V ++ Sbjct: 10 MLALSFIVPFHGHAEEKSAVPQLAYFTLEPDLTTNFFTKGNKLGYIQVRIDIMVANAADL 69 Query: 78 -ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISE 132 + + D + LL + ++LRK + LN+ L G I++ Sbjct: 70 PVVEQHQPLIRDAVVELLGKQTEDTIKSLAGR--EDLRKSLVNRLNNILLPEVGRTVIAD 127 Query: 133 VLIDELNY 140 +L + Y Sbjct: 128 LLFTKYIY 135 >gi|119775426|ref|YP_928166.1| flagellar basal body-associated protein FliL [Shewanella amazonensis SB2B] gi|119767926|gb|ABM00497.1| flagellar protein FliL [Shewanella amazonensis SB2B] Length = 175 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 18/154 (11%), Positives = 45/154 (29%), Gaps = 20/154 (12%) Query: 4 FLFSGIWIS-VVTLISFYMLFLRSMDTMVENHVPPLAIKNTN----------IIKSELVS 52 F+ G+ ++ ++ + ++ L + + A + Sbjct: 22 FIIIGVVVAALLGVGAWLFLGSSDPEPVAAEAATEAAGGAAASAESNSREAFYVAMPRPF 81 Query: 53 IPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFG 109 + ++ +K+ +V +D + D L T SG + Sbjct: 82 LFNLPGQPRSRLVEIKVQLMVRGADDDVLIKKHIPLIEDALLTTFSGGDVQKLSTQAGKD 141 Query: 110 FDNLRK----KIKEDLNSRLGSQFISEVLIDELN 139 LR+ ++ L G + + +VL Sbjct: 142 --ELRQLALLNVQNTLQPVTGRKVVEKVLFTGFV 173 >gi|56459377|ref|YP_154658.1| flagellar basal body-associated protein FliL-like protein [Idiomarina loihiensis L2TR] gi|56178387|gb|AAV81109.1| Flagellar basal body-associated protein [Idiomarina loihiensis L2TR] Length = 132 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 22/151 (14%), Positives = 46/151 (30%), Gaps = 32/151 (21%) Query: 2 LKFLFSG-----IWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSV 56 +K L + +W S VT+ S + + ++ + Sbjct: 1 MKLLITVFASIFLWFSSVTVASADDVSYYGFEPD--------------------ITTNYL 40 Query: 57 SNGV--LQAYFLVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFD 111 G + V + +V D + + + T+LS + Sbjct: 41 KEGNDYRLGFIRVAIEVMVPDPSYVSVVEHHAPLLRNAFVTILSTATERQVRTMTGRDQL 100 Query: 112 NLR--KKIKEDLNSRLGSQFISEVLIDELNY 140 L+ ++ KE + G+ I +VL + Y Sbjct: 101 RLKCIERAKELMQQETGNPVIRDVLFTKYIY 131 >gi|73539705|ref|YP_300072.1| flagellar basal body-associated protein FliL [Ralstonia eutropha JMP134] gi|72123042|gb|AAZ65228.1| Flagellar basal body-associated protein FliL [Ralstonia eutropha JMP134] Length = 145 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 39/146 (26%), Gaps = 11/146 (7%) Query: 2 LKFLFSGIWISVVTLIS-FYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 + + G+ I + L + V I + + ++ Sbjct: 1 MLLIGGGVLILALGAGGFVLGSILSNRQPAVPAAPAAPVIPPPIFVPLDAFTVNLKGEDG 60 Query: 61 LQAYFLVKLSFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + LS V D + A + LLS D ++ L I Sbjct: 61 -DRFLHTGLSLKVADADTQARMTQYLPEARSRILLLLSARQPADLATVEGK--RKLADDI 117 Query: 118 KEDLNSR----LGSQFISEVLIDELN 139 + +N L Q + +VL Sbjct: 118 RNAINQPFATGLPPQRVLDVLFTSFV 143 >gi|27364578|ref|NP_760106.1| flagellar basal body-associated protein FliL-like protein [Vibrio vulnificus CMCP6] gi|37678303|ref|NP_932912.1| flagellar basal body-associated protein FliL-like protein [Vibrio vulnificus YJ016] gi|320154981|ref|YP_004187360.1| flagellar biosynthesis protein FliL [Vibrio vulnificus MO6-24/O] gi|27360697|gb|AAO09633.1| Flagellar biosynthesis protein fliL [Vibrio vulnificus CMCP6] gi|37197042|dbj|BAC92883.1| flagellar basal body-associated protein [Vibrio vulnificus YJ016] gi|319930293|gb|ADV85157.1| flagellar biosynthesis protein FliL [Vibrio vulnificus MO6-24/O] Length = 136 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 10/115 (8%) Query: 34 HVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDY 89 E ++ + G Y V++ +V D + + + D Sbjct: 23 AEEEQTGPQLAYFTLEPDLTTNFYTKGKKLGYIQVRIDIMVMSNADLALVEHHQPLIRDA 82 Query: 90 LYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEVLIDELNY 140 + LL + ++LRK + E LN L G I+++L + Y Sbjct: 83 VVELLGQQSEDTVKSLAGR--EDLRKHLVEKLNEILLPETGKTVIADLLFTKYLY 135 >gi|303326428|ref|ZP_07356871.1| putative flagellar basal body-associated protein [Desulfovibrio sp. 3_1_syn3] gi|302864344|gb|EFL87275.1| putative flagellar basal body-associated protein [Desulfovibrio sp. 3_1_syn3] Length = 224 Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 16/143 (11%), Positives = 40/143 (27%), Gaps = 12/143 (8%) Query: 6 FSGIWISVVTLISFYMLFLRSMDTMVENHV------PPLAIKNTNIIK-SELVSIPSVSN 58 G+ + + ++ L P + +K +P Sbjct: 81 VVGLLLILGAAAWWFFLRTPPPAPDTLKPEVIVVPSKPTVKTKPDYVKEFAPFLVPRDDG 140 Query: 59 GVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 + + K S + D+ + + D +Y L + + +++ Sbjct: 141 KSKTRFLVCKFSAVSKDAGLGKEMDQKMISLRDAMYYYLRSKSNEYLMDPR--NGPAIKQ 198 Query: 116 KIKEDLNSRLGSQFISEVLIDEL 138 + LN L I ++L + Sbjct: 199 DLASVLNDYLTHGKIEDILFESY 221 >gi|126176139|ref|YP_001052288.1| flagellar basal body-associated protein FliL [Shewanella baltica OS155] gi|304412491|ref|ZP_07394097.1| flagellar basal body-associated protein FliL [Shewanella baltica OS183] gi|307307150|ref|ZP_07586888.1| flagellar basal body-associated protein FliL [Shewanella baltica BA175] gi|125999344|gb|ABN63419.1| flagellar basal body-associated protein FliL [Shewanella baltica OS155] gi|304349133|gb|EFM13545.1| flagellar basal body-associated protein FliL [Shewanella baltica OS183] gi|306910389|gb|EFN40820.1| flagellar basal body-associated protein FliL [Shewanella baltica BA175] Length = 155 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 17/145 (11%), Positives = 46/145 (31%), Gaps = 13/145 (8%) Query: 2 LKFLFSGIWISVVTLISFYMLFL---RSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSN 58 +K + + + + T +F++ + + + + E I + Sbjct: 9 VKIILALLVLISSTAGAFWIGTSSGDWKLAELFASEPEVEPVPVAKFYPLEKFVISIPGD 68 Query: 59 GVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 Y L+++S ++ ++ L + + + + S + D+L+ Sbjct: 69 -KYPHYMLLEMSLKSHNPNMKTVLLESDPLIRNAMMKMFSRKTFEQLNHLDQ--LDSLQS 125 Query: 116 KIKEDLNSRLGSQF----ISEVLID 136 + + L I EVL Sbjct: 126 EALILMVKVLSDNKLPSDIDEVLFT 150 >gi|258514012|ref|YP_003190234.1| flagellar basal body-associated protein FliL [Desulfotomaculum acetoxidans DSM 771] gi|257777717|gb|ACV61611.1| flagellar basal body-associated protein FliL [Desulfotomaculum acetoxidans DSM 771] Length = 157 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 13/128 (10%), Positives = 36/128 (28%), Gaps = 13/128 (10%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN 74 S+Y + + + + + + G + V Sbjct: 36 AAGSYYFFVI--KAHSSKETKKEEPKPEISTFELGSIVVNLADQG---HFLRVSPVLEYE 90 Query: 75 -DSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFI 130 D + +K D + T+L + + + ++++++I N + Sbjct: 91 KDEKMAEEVKTRKSEIIDQVITILRKKSVENCSK----SLESIKEEIIAAANKSMEEPVF 146 Query: 131 SEVLIDEL 138 + EL Sbjct: 147 KRLYFVEL 154 >gi|188592200|ref|YP_001796798.1| flil: flagellar basal body-associated protein flil [Cupriavidus taiwanensis LMG 19424] gi|170938574|emb|CAP63561.1| FliL: flagellar basal body-associated protein FliL [Cupriavidus taiwanensis LMG 19424] Length = 163 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 45/145 (31%), Gaps = 9/145 (6%) Query: 3 KFLFSGIWISVVTLISFYM---LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59 + L G + VV L + L + + + + ++ ++ + Sbjct: 18 RLLLIGAGVLVVALGAGGFVLGSVLSNRQPAAPATPAAPVVPPPIFVPLDAFTV-NLRSE 76 Query: 60 VLQAYFLVKLSFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFV--QIKAFGFDNLR 114 + LS V D + A + LLS + K D++R Sbjct: 77 DGDRFLHTGLSLKVADAATQARLAQYLPEARSRILLLLSARQPAELATVDGKRKLADDIR 136 Query: 115 KKIKEDLNSRLGSQFISEVLIDELN 139 I + S L +Q + +VL Sbjct: 137 DTISKPFASGLPAQQVLDVLFTSFV 161 >gi|323492932|ref|ZP_08098072.1| flagellar basal body-associated protein FliL-like protein [Vibrio brasiliensis LMG 20546] gi|323312825|gb|EGA65949.1| flagellar basal body-associated protein FliL-like protein [Vibrio brasiliensis LMG 20546] Length = 135 Score = 48.5 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 40/127 (31%), Gaps = 10/127 (7%) Query: 22 LFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDSQ--- 77 S+ + E ++ + G Y V++ +V Sbjct: 10 FVAWSLLISLPAMAEEEGAPKLAYFTLEPDLTTNFFTKGKKLGYIQVRIDIMVASEADLS 69 Query: 78 ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEV 133 + + D + LL + ++LRK + E LN+ L G I+++ Sbjct: 70 VIELHQPLIRDAVIELLGKQSEETITSLAGR--EDLRKTLVEQLNATLLPETGKTIIADL 127 Query: 134 LIDELNY 140 L + Y Sbjct: 128 LFTKYLY 134 >gi|320107030|ref|YP_004182620.1| flagellar basal body-associated protein FliL [Terriglobus saanensis SP1PR4] gi|319925551|gb|ADV82626.1| flagellar basal body-associated protein FliL [Terriglobus saanensis SP1PR4] Length = 174 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 23/153 (15%), Positives = 51/153 (33%), Gaps = 21/153 (13%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLA-------IKNTNIIKSELVSIPSV 56 L I +V++ +F M + T + E + + ++ Sbjct: 21 LLIVAIVAAVLSAGGAAAVFYFLAKRMGVSPFSETKTFDSRQGAAQTKQVPFEPMLV-NL 79 Query: 57 SNGVLQAYFLVKLSFIVNDSQERS-----------YLKEIATDYLYTLLSGPPMGDFVQI 105 ++ QAY + + V D E++ Y D + +++ GD + Sbjct: 80 ADSDGQAYLRLGVVLSVLDEPEKAGKEKVDAAHPVYGSAAMRDTILSVVGAEKSGDLLMS 139 Query: 106 KAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 L+ K++ + R + I++V E Sbjct: 140 SGKS--ALKTKLRSAIQQRDPALKIADVFFTEF 170 >gi|167647004|ref|YP_001684667.1| hypothetical protein Caul_3042 [Caulobacter sp. K31] gi|167349434|gb|ABZ72169.1| conserved hypothetical protein [Caulobacter sp. K31] Length = 174 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 20/154 (12%), Positives = 47/154 (30%), Gaps = 17/154 (11%) Query: 27 MDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---K 83 + +IK + +++P + +G L Y ++ S + + + Sbjct: 28 NSPKKKGKEGEAEAAPDPVIKLQSMALPVIVDGRLVNYVFLQSSITLKPGVLVTIFEGKE 87 Query: 84 EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLI---DELNY 140 I D + P A L+ I N+ +G ++ V I N+ Sbjct: 88 PILRDAIVREAHTKPFTRPDSYAALDEGRLKASILRQANALIGPGKVAMVTIIKQTPRNF 147 Query: 141 LSIVDMRSNCLRLGSNASDLMTQKGSLIEKNKEP 174 + +K + +++ +P Sbjct: 148 VPPPK-----------PGTQGAKKPAPVQQRGDP 170 >gi|260774821|ref|ZP_05883723.1| flagellar biosynthesis protein FliL [Vibrio coralliilyticus ATCC BAA-450] gi|260609246|gb|EEX35401.1| flagellar biosynthesis protein FliL [Vibrio coralliilyticus ATCC BAA-450] Length = 135 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 25/148 (16%), Positives = 50/148 (33%), Gaps = 22/148 (14%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNG 59 M+K I++++ L+S + E ++ + G Sbjct: 1 MIKRYLVQIFVALSVLVSL------------SSIAEEGGEPKLAYFTLEPDLTTNFYTKG 48 Query: 60 VLQAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 Y V++ +V + + + D + LL + ++LRK Sbjct: 49 KQLGYIQVRIDIMVANETDLAIIELHQPLIRDAVIELLGKQSSDTITSLAGR--EDLRKN 106 Query: 117 IKEDLNSRL----GSQFISEVLIDELNY 140 + E LNS L G I+++L + Y Sbjct: 107 LVEQLNSILLPETGRTIIADLLFTKYLY 134 >gi|27381979|ref|NP_773508.1| flagellar protein [Bradyrhizobium japonicum USDA 110] gi|27355149|dbj|BAC52133.1| flagellar protein [Bradyrhizobium japonicum USDA 110] Length = 148 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 18/146 (12%), Positives = 46/146 (31%), Gaps = 13/146 (8%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNII----------KSEL 50 M++ + + + +++V + + + L + + K Sbjct: 1 MMRLIAAIVALTLVAIGAGALAGLHLFAAAERVADAKKSPTPPPLASSYAGSARLRKLSP 60 Query: 51 VSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF 110 + + A + ++ L ++ + T L F + G Sbjct: 61 IVTNLAAPANNWARVEASMVTDSMSDEDAGILAAHISEDIVTYLRSASAAQFE--GSRGL 118 Query: 111 DNLRKKIKEDLNSRLGSQFISEVLID 136 +LR + E N R S + E++I+ Sbjct: 119 QHLRDDLAERANVR-SSGKVRELIIE 143 >gi|254519410|ref|ZP_05131466.1| chemotaxis motB protein [Clostridium sp. 7_2_43FAA] gi|226913159|gb|EEH98360.1| chemotaxis motB protein [Clostridium sp. 7_2_43FAA] Length = 148 Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 40/129 (31%), Gaps = 16/129 (12%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN 74 T Y +N+ + + + + ++S+ + Y + LS + Sbjct: 28 TFGGVYYFMN-------KNNASQPVVIEEAFFEVGEIFV-NLSDEGSKRYVKLNLSISYD 79 Query: 75 --DSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF 129 + +++ D + F L+ + +N +L S Sbjct: 80 KNNKDLAKEIEDKKVVLRDVAIFYVKSCKASSFEPANEA---VLKGDMITRMNQKLKSGL 136 Query: 130 ISEVLIDEL 138 I +V I ++ Sbjct: 137 IKDVYISDI 145 >gi|254509252|ref|ZP_05121346.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus 16] gi|219547806|gb|EED24837.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus 16] Length = 135 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 41/127 (32%), Gaps = 10/127 (7%) Query: 22 LFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDS---Q 77 ++ + + E ++ + G Y V++ +V Sbjct: 10 FVAWTLLISLPTLAEEEGVPKLAYFTLEPDLTTNFYTKGKKLGYIQVRIDIMVAAETDLA 69 Query: 78 ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEV 133 + + D + LL + ++LRK + E LNS L G I+++ Sbjct: 70 IIELHQPLIRDAVIELLGQQSEDTITSLAGR--EDLRKSLVEQLNSILLPETGKTVIADL 127 Query: 134 LIDELNY 140 L + Y Sbjct: 128 LFTKYLY 134 >gi|17548600|ref|NP_521940.1| flagellar basal body-associated protein FliL [Ralstonia solanacearum GMI1000] gi|17430848|emb|CAD17530.1| probable flagellar flil transmembrane protein [Ralstonia solanacearum GMI1000] Length = 164 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 17/132 (12%), Positives = 36/132 (27%), Gaps = 9/132 (6%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN 74 + F + P K + E +++ Y + ++F Sbjct: 33 GMGGAAAWFFLGGGSHAAGPAAPPKPKEPVFVPMETLTVNLQPEEGNDRYLQIAITFKSY 92 Query: 75 DSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN---SRLGSQ 128 + +K + LLS + + L K+I E +G + Sbjct: 93 NKHAEEEIKSYTPELRSRVLMLLSSKAPAELYSNEGKA--KLAKEIVEQCEQAYKAVGKE 150 Query: 129 F-ISEVLIDELN 139 + +VL Sbjct: 151 SPVVDVLFTNFV 162 >gi|329888224|ref|ZP_08266822.1| flagellar fliL protein [Brevundimonas diminuta ATCC 11568] gi|328846780|gb|EGF96342.1| flagellar fliL protein [Brevundimonas diminuta ATCC 11568] Length = 220 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 28/104 (26%), Gaps = 5/104 (4%) Query: 37 PLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER---SYLKEIATDYLYTL 93 + + S Y ++L+ + D+ D Sbjct: 115 AAGPDGVTFYTLPDMIVNIQSADGRPTYLKLRLTLEMKDAAVASHLQAEAPRMQDMFQGF 174 Query: 94 LSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 L D + G LR +I +N + VLI+E Sbjct: 175 LRELRPEDLA--GSAGSYQLRAEILRRVNLIAAPGKVDAVLIEE 216 >gi|119384850|ref|YP_915906.1| hypothetical protein Pden_2118 [Paracoccus denitrificans PD1222] gi|119374617|gb|ABL70210.1| conserved hypothetical protein [Paracoccus denitrificans PD1222] Length = 177 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 21/173 (12%), Positives = 38/173 (21%), Gaps = 36/173 (20%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSM------------------DTMVENHVPPLAIKN 42 M K L + + + L + A Sbjct: 1 MKKILLILVPLLAFLGGAVGGDMLGGARTSGQAGHDAGAAATGEHEPPAAPDPEKSAKDG 60 Query: 43 TN------------IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKE--IATD 88 + +P + NG A ++ LS + S + D Sbjct: 61 GDGKAADGDANLDWFTFPNQFFVPVLRNGTSSAVMILTLSIEMPASARADIEAQEHRLRD 120 Query: 89 YLYTLLS---GPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 L L D LR + G + +LI+++ Sbjct: 121 ALLNALMIEANTGAFDGNFTAEPTLRRLRDALLAAGQRTAGPN-VKRILIEDI 172 >gi|256376461|ref|YP_003100121.1| flagellar basal body-associated protein FliL [Actinosynnema mirum DSM 43827] gi|255920764|gb|ACU36275.1| flagellar basal body-associated protein FliL [Actinosynnema mirum DSM 43827] Length = 149 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 50/138 (36%), Gaps = 16/138 (11%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 L + + +++ S++ LF P + ++ + +++ ++++G Sbjct: 26 LLIIVAVAVLALGGAGSWFFLFR---------DSTPAPPEPGTVVALDSITM-NLADG-- 73 Query: 62 QAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDL 121 Y +KLS A D + + S + + +A ++L+ ++E + Sbjct: 74 -HYLKLKLSLQQTKDAAEDVDGSKALDLVVSEFSNRSIAELSSNEAR--ESLKAALQEKV 130 Query: 122 NSRLGSQFISEVLIDELN 139 S + + E Sbjct: 131 VSAY-EDLVMGIYFTEFV 147 >gi|262163663|ref|ZP_06031404.1| flagellar biosynthesis protein FliL [Vibrio mimicus VM223] gi|262027879|gb|EEY46543.1| flagellar biosynthesis protein FliL [Vibrio mimicus VM223] Length = 121 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 20/120 (16%), Positives = 43/120 (35%), Gaps = 10/120 (8%) Query: 29 TMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDSQ---ERSYLKE 84 + + P A+ E ++ + G Y V++ +V ++ + Sbjct: 3 SFASHAEDPPAVPQLAYFTLEPDLTTNFFTKGNKLGYIQVRIDIMVANAADLPVIEKHQP 62 Query: 85 IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEVLIDELNY 140 + D + LL + ++LRK + LN+ L G I+++L + Y Sbjct: 63 LIRDAVVELLGKQTEDTIKSLAGR--EDLRKSLVSRLNNILLPEIGRTVIADLLFTKYIY 120 >gi|254418238|ref|ZP_05031962.1| flagellar basal body-associated protein FliL [Brevundimonas sp. BAL3] gi|196184415|gb|EDX79391.1| flagellar basal body-associated protein FliL [Brevundimonas sp. BAL3] Length = 225 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 15/124 (12%), Positives = 32/124 (25%), Gaps = 5/124 (4%) Query: 17 ISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDS 76 + + + + S + +KL+ ++D+ Sbjct: 100 GGGHGAPAEGGEADPALGKISEGPDGVTFYTLPDMVMNIQSADGRPTFLKLKLTLEMHDA 159 Query: 77 QER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEV 133 + D + D + G LR +I +N + V Sbjct: 160 EVATHLQSEMPRLQDMFTGFVRELRPEDLS--GSAGTYQLRAEILRRVNLVAAPGKVDAV 217 Query: 134 LIDE 137 LI+E Sbjct: 218 LIEE 221 >gi|288962687|ref|YP_003452981.1| FliL protein [Azospirillum sp. B510] gi|288914953|dbj|BAI76437.1| FliL protein [Azospirillum sp. B510] Length = 179 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 42/154 (27%), Gaps = 20/154 (12%) Query: 3 KFLFSGIWISVVTLISFY-----------MLFLRSMDTMVENHVPPLAIKNTNIIKSELV 51 + L + I+ + + P + + Sbjct: 25 RILVIALPIARLLAGVLMLGAVAAAGLGGYWLAAGTPAVERLWAPAAESVPADAVAEMPE 84 Query: 52 SIPSVSNGVLQAYFLVKLSFIVN--DSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFG 109 + ++ + + LS V+ D Q TD L L D + G Sbjct: 85 LVVNLRRDTPSRFLKIGLSLTVSPRDRQRVEQAMPQLTDSLQEFLRNLDQDDLE--GSAG 142 Query: 110 FDNLRKKIKEDLNSRLGS-----QFISEVLIDEL 138 LR +IK N L +++VL+ L Sbjct: 143 LHRLRSEIKRRFNLILSDPAGRRDVVTDVLLRSL 176 >gi|319403966|emb|CBI77554.1| Flagellar basal body-associated protein FliL [Bartonella rochalimae ATCC BAA-1498] Length = 166 Score = 48.1 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 54/146 (36%), Gaps = 13/146 (8%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVEN----HVPPLAIKNTNIIKSELVSI---PSV 56 FL G +++V +S + L M P+ N+I ++ + P + Sbjct: 21 FLIVGFVLTLVAAVSGWFLGAWVSREMAPTSSNLKELPMTKTPENLIAADSHIVTLPPIL 80 Query: 57 SNGVL--QAYFLVKLSFIV-NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113 +N + A+ +++S ++ D + L ++ L + G NL Sbjct: 81 TNIAVPENAWIRMEVSLVIKPDENIEATLTADISNDFLAFLRQVTIDQVKGPS--GLMNL 138 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELN 139 R + + R G +S +LI L Sbjct: 139 RADLLDRARVRSG-NKVSNILISSLV 163 >gi|261210189|ref|ZP_05924486.1| flagellar biosynthesis protein FliL [Vibrio sp. RC341] gi|260840729|gb|EEX67278.1| flagellar biosynthesis protein FliL [Vibrio sp. RC341] Length = 121 Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 20/115 (17%), Positives = 40/115 (34%), Gaps = 10/115 (8%) Query: 34 HVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDSQ---ERSYLKEIATDY 89 P A E ++ + G Y V++ +V ++ + + D Sbjct: 8 AEDPPAAPQLAYFTLEPDLTTNFFTKGNKLGYIQVRIDIMVANAADLPIVEQHQPLIRDA 67 Query: 90 LYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEVLIDELNY 140 + LL + ++LRK + LN+ L G I+++L + Y Sbjct: 68 VVELLGKQTEDTIKSLAGR--EDLRKSLVNRLNNILLPEVGRTVIADLLFTKYIY 120 >gi|315125870|ref|YP_004067873.1| flagellar basal body-associated protein FliL-like protein [Pseudoalteromonas sp. SM9913] gi|315014384|gb|ADT67722.1| flagellar basal body-associated protein FliL-like protein [Pseudoalteromonas sp. SM9913] Length = 132 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 25/146 (17%), Positives = 52/146 (35%), Gaps = 19/146 (13%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M K +F+G++I +V+L S + + ++++ + Sbjct: 1 MKKTVFTGLFILLVSLTSL-------------SARAESTVGYFGFEP-DIITNYIGPSSK 46 Query: 61 LQAYFLVKLSFIVN---DSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR--K 115 Y V + ++N D + + D L +LS P + L+ + Sbjct: 47 KMGYVRVTVDLMLNKTSDIAIVEHHTPLLRDALVEILSKEPENKIKSLTGREQIRLKSAE 106 Query: 116 KIKEDLNSRLGSQFISEVLIDELNYL 141 K+K L G + I ++L + Y Sbjct: 107 KLKSLLKEETGHEIIRDLLFTKYLYH 132 >gi|225159022|ref|ZP_03725332.1| flagellar basal body-associated protein FliL [Opitutaceae bacterium TAV2] gi|224802401|gb|EEG20663.1| flagellar basal body-associated protein FliL [Opitutaceae bacterium TAV2] Length = 185 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 14/91 (15%), Positives = 30/91 (32%), Gaps = 5/91 (5%) Query: 52 SIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAF 108 + +++ + Y V D + + D +LS + D + A Sbjct: 95 VVVNLAGSMGTRYLKVSFIATGADKTLAAEFAQRKAQLLDVTINVLSSLSLADLEEAGAR 154 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 LR+++ N LG + +V + Sbjct: 155 NL--LRERLVSSYNQTLGRRLAEQVYFTDFV 183 >gi|330447176|ref|ZP_08310826.1| flagellar basal body-associated FliL family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] gi|328491367|dbj|GAA05323.1| flagellar basal body-associated FliL family protein [Photobacterium leiognathi subsp. mandapamensis svers.1.1.] Length = 139 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 17/134 (12%), Positives = 48/134 (35%), Gaps = 9/134 (6%) Query: 14 VTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV 73 T ++ L + + + T ++ V+ G Y +++ ++ Sbjct: 7 ATALTLVGLLQSPIAVASSSEDVANQPQITYYTLEPDITTNYVTQGKRLGYIRLQIDLMI 66 Query: 74 NDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF- 129 D + Y + D + ++S P + + +R+ ++ +N L ++ Sbjct: 67 RDQKHLTEIEYHTPLIRDAIIEIVSKQPEAKIKSLAGR--EEIRRACQDQVNRLLLAETR 124 Query: 130 ---ISEVLIDELNY 140 ++E+L + Y Sbjct: 125 HQPVAELLFTKFLY 138 >gi|87307404|ref|ZP_01089549.1| dihydrolipoamide acetyltransferase-like protein [Blastopirellula marina DSM 3645] gi|87290144|gb|EAQ82033.1| dihydrolipoamide acetyltransferase-like protein [Blastopirellula marina DSM 3645] Length = 178 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 20/165 (12%), Positives = 47/165 (28%), Gaps = 27/165 (16%) Query: 1 MLKFLFSGIWISVVTLIS--FYMLFLRSMD-------TMVENHVPPLAIKNTNIIKSELV 51 M K G +++V L Y + D ++ +++ + + Sbjct: 15 MTKLKILGAVLALVGLECMLAYFVIPSPEDVIEAAEMRARQHTATEPDVEDLTAVSDKAT 74 Query: 52 SIPSVSNGVL---------------QAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSG 96 + N + Y +V + + + + L Sbjct: 75 VEVDLKNFGITAYQPLANTTLRIDFHLYAMVNAENQGEFETLIAQNEHRFREQVLVTLRS 134 Query: 97 PPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYL 141 + D L++KI E N LG + V+ + +++ Sbjct: 135 SEVSDLTDPG---LGLLKRKILEKTNRILGKPLVKSVIFSDYSFI 176 >gi|320329382|gb|EFW85375.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. glycinea str. race 4] gi|330883032|gb|EGH17181.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. glycinea str. race 4] Length = 169 Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/136 (11%), Positives = 37/136 (27%), Gaps = 10/136 (7%) Query: 14 VTLISFYMLFLRSMDTMVENHVPP-----LAIKNTNIIKSELVSIPSVSNGVLQAYFLVK 68 +++ + + L +S T V + + ++ Q Y V Sbjct: 32 LSVGATWFLMHKSESTPVPAAAAAAAAAANVKPVAVFEPMTPAFVVNFNSNGRQRYMQVS 91 Query: 69 LSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF--DNLRKKIKEDLNS 123 ++ + ++ + + L L + P I+E Sbjct: 92 ITMLARNAADMEALKAHMPLIRNNLVMLFAAIPFESLASPIGQEMLRQKATASIQEVAQK 151 Query: 124 RLGSQFISEVLIDELN 139 LG I ++L Sbjct: 152 ELGKTVIEQLLFTNFV 167 >gi|320325123|gb|EFW81192.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. glycinea str. B076] Length = 169 Score = 47.7 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 15/136 (11%), Positives = 36/136 (26%), Gaps = 10/136 (7%) Query: 14 VTLISFYMLFLRSMDTMVENHVPP-----LAIKNTNIIKSELVSIPSVSNGVLQAYFLVK 68 +++ + + L +S T + + ++ Q Y V Sbjct: 32 LSVGATWFLMHKSESTPDPAAAAAAAAAANVKPVAVFEPMTPAFVVNFNSNGRQRYMQVS 91 Query: 69 LSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF--DNLRKKIKEDLNS 123 ++ + ++ + + L L + P I+E Sbjct: 92 ITMLARNAADMEALKAHMPLIRNNLVMLFAAIPFESLASPIGQEMLRQKATASIQEVAQK 151 Query: 124 RLGSQFISEVLIDELN 139 LG I ++L Sbjct: 152 ELGKTVIEQLLFTNFV 167 >gi|682649|gb|AAA62448.1| FliL [Caulobacter crescentus CB15] Length = 204 Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 17/105 (16%), Positives = 32/105 (30%), Gaps = 5/105 (4%) Query: 36 PPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKE---IATDYLYT 92 + + + + +KL+F + D + L D T Sbjct: 98 DQGGPDGVVFYTLPDIVVNMQTADGKSTFLKLKLTFELPDEETADELTPNLPRLQDMFQT 157 Query: 93 LLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 L D + G LR ++ +N ++ VLI+E Sbjct: 158 FLRELRPEDLN--GSQGTYQLRVELLRRVNLVAAPAKVNAVLIEE 200 >gi|95929860|ref|ZP_01312601.1| flagellar basal body-associated protein FliL [Desulfuromonas acetoxidans DSM 684] gi|95134156|gb|EAT15814.1| flagellar basal body-associated protein FliL [Desulfuromonas acetoxidans DSM 684] Length = 136 Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 18/137 (13%), Positives = 40/137 (29%), Gaps = 11/137 (8%) Query: 11 ISVVTLISFYMLFLRSMDTMVENHVPP-----LAIKNTNIIKSELVSIPSVSNGVLQAYF 65 + + I+ Y+L RS A ++ I + + Y Sbjct: 1 MLIAVGIAAYLLGSRSAQQAPAGESAEVEDTSKAEGVGPMVDITDFIINIL-DKNETRYL 59 Query: 66 LVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN 122 ++ + + + E + D + L+ + ++ LR +I LN Sbjct: 60 KAAITLELENEETVVEVNERMPQIRDSILLLIGNKTFAELNDLQGKL--QLRAEIIVRLN 117 Query: 123 SRLGSQFISEVLIDELN 139 L + + E Sbjct: 118 KLLKKGKVKGIYFTEFV 134 >gi|85060030|ref|YP_455732.1| flagellar basal body-associated protein FliL [Sodalis glossinidius str. 'morsitans'] gi|84780550|dbj|BAE75327.1| flagellar protein FliL [Sodalis glossinidius str. 'morsitans'] Length = 153 Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats. Identities = 17/136 (12%), Positives = 40/136 (29%), Gaps = 12/136 (8%) Query: 9 IWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS-NGVLQAYFLV 67 I + + + Y ++ E ++ + + L V Sbjct: 21 IVLIAASGAAGYF---WWQLRAAATTSLAPPPAPVFMV-LETFTVNVANPDNDLDRVLYV 76 Query: 68 KLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFG--FDNLRKKIKEDLN 122 L+ + + + R + L LS G+ + D +++ + E L Sbjct: 77 GLTLRLPNEETRKTFNDYLPLVHSRLL--LSRQQAGELASPQGKQGLIDKIKQTLAEPLV 134 Query: 123 SRLGSQFISEVLIDEL 138 + Q + +VL Sbjct: 135 AGQPPQVVDDVLFTAF 150 >gi|221235078|ref|YP_002517514.1| flagellar fliL protein [Caulobacter crescentus NA1000] gi|300680947|sp|B8GXB6|FLIL_CAUCN RecName: Full=Flagellar FliL protein gi|300680948|sp|P0CG27|FLIL_CAUCR RecName: Full=Flagellar FliL protein gi|220964250|gb|ACL95606.1| flagellar fliL protein [Caulobacter crescentus NA1000] Length = 205 Score = 47.4 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 18/115 (15%), Positives = 34/115 (29%), Gaps = 5/115 (4%) Query: 26 SMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKE- 84 + V + + + + +KL+F + D + L Sbjct: 89 GAEGAAGTPVIKEGPDGVVFYTLPDIVVNMQTADGKSTFLKLKLTFELPDEETADELTPN 148 Query: 85 --IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 D T L D + G LR ++ +N ++ VLI+E Sbjct: 149 LPRLQDMFQTFLRELRPEDLN--GSQGTYQLRVELLRRVNLVAAPAKVNAVLIEE 201 >gi|188582488|ref|YP_001925933.1| flagellar basal body-associated protein FliL [Methylobacterium populi BJ001] gi|179345986|gb|ACB81398.1| flagellar basal body-associated protein FliL [Methylobacterium populi BJ001] Length = 192 Score = 47.4 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 17/145 (11%), Positives = 42/145 (28%), Gaps = 12/145 (8%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENH-----VPPLAIKNTNIIKSELVSIPSVS 57 K + + ++ +F++S + H + + + Sbjct: 46 KLIIIAAAVLLLGGGGGGFMFMKSRAAHADAHGEHAGEKVDPKAQAVFLDMRDMMVNLSP 105 Query: 58 NGVLQA--YFLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDN 112 + ++++ + D++ L D T L D + G Sbjct: 106 DPGATKANVLKLRVALELKDAKVESTVKPLMPRVEDAFQTYLREIRASDLA--GSAGLYR 163 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDE 137 LR+++ +N L VL + Sbjct: 164 LREELLRRVNIALHPAKAEAVLFKD 188 >gi|299068766|emb|CBJ40006.1| Flagellar basal body-associated protein FliL [Ralstonia solanacearum CMR15] Length = 164 Score = 47.4 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 36/132 (27%), Gaps = 9/132 (6%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN 74 + F + P K + E +++ Y + ++F Sbjct: 33 GMGGAAAWFFLGGGSHAAGPAAPPKPKEPFFVPMETLTVNLQPEEGNDRYLQIAITFKSY 92 Query: 75 DSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN---SRLGSQ 128 D +K + LLS + + L K+I E +G + Sbjct: 93 DKHAEEEIKSYTPELRSRVLMLLSSKAPAELYSNEGKA--KLAKEIVEQCEQAYKAVGKE 150 Query: 129 F-ISEVLIDELN 139 + +VL Sbjct: 151 SPVVDVLFTNFV 162 >gi|221635436|ref|YP_002523312.1| flagellar basal body-associated protein FliL [Thermomicrobium roseum DSM 5159] gi|221157605|gb|ACM06723.1| flagellar basal body-associated protein FliL [Thermomicrobium roseum DSM 5159] Length = 181 Score = 47.4 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 13/155 (8%), Positives = 44/155 (28%), Gaps = 30/155 (19%) Query: 12 SVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSF 71 + + + +++ + + + + ++++ Y ++ Sbjct: 28 LLGGAGAAPFVLNITINQSGDGGKSAAPAEQHLTVSLGERIV-NLADPGGYRYLKTEIVV 86 Query: 72 IV-------------------------NDSQERSYLK--EIATDYLYTLLSGPPMGDFVQ 104 V D D L +L+ + + Sbjct: 87 EVAVDQKTYERLTAAGGGGGHGGGGGSTDPLRAELEHSWPKIQDTLTMVLTSKTVDELAT 146 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ ++L+ +++E L G I+EV + + Sbjct: 147 LEGK--EHLKDELREKLQPAFGDYKITEVYLTQFV 179 >gi|83944185|ref|ZP_00956641.1| Flagellar basal body-associated protein FliL [Sulfitobacter sp. EE-36] gi|83845052|gb|EAP82933.1| Flagellar basal body-associated protein FliL [Sulfitobacter sp. EE-36] Length = 212 Score = 47.4 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 23/183 (12%), Positives = 48/183 (26%), Gaps = 49/183 (26%) Query: 3 KFLFSGIWISVVTLISFYMLFLRS------------------------------------ 26 K L + + VV+L + L + Sbjct: 29 KMLIAAALMCVVSLGGGFFLARAAYVKDAEAFEPEYKSEEADQTDTKDDHADTEDHGKDD 88 Query: 27 ---MDTMVENHVPPLAIKNTNIIKSELVSIPSVS----NGVLQAYFLVKLSFIV----ND 75 + E+H +T +I + A+ V L + Sbjct: 89 HAKDEGDAEDHADNTKAASTGLIDLGEMLTNIQGFDQNGTPTSAFLKVNLMVAYRPDEDA 148 Query: 76 SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLI 135 + + D L G D + + ++ ++ + + +GS E+LI Sbjct: 149 DKLMVERQPFMRDLFNGYLRGLTENDVRGMAGILY--IKAELLKRARAAVGSDLPQEILI 206 Query: 136 DEL 138 +L Sbjct: 207 KDL 209 >gi|163803400|ref|ZP_02197275.1| flagellar basal body-associated protein [Vibrio sp. AND4] gi|159172804|gb|EDP57649.1| flagellar basal body-associated protein [Vibrio sp. AND4] Length = 136 Score = 47.4 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 19/120 (15%), Positives = 40/120 (33%), Gaps = 10/120 (8%) Query: 29 TMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKE 84 + E ++ + G Y V++ +V D + + Sbjct: 18 SAPSWAESEQTAPKLAYFTLEPDLTTNFYTKGNQLGYVQVRIDIMVMSQQDLAVVEHHQP 77 Query: 85 IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEVLIDELNY 140 + D + LL + ++LRK + ++LN L G I+++L + Y Sbjct: 78 LIRDAIIELLGKQTEDTIKSLSGR--EDLRKTLVKELNETLLPETGKTIIADLLFTKYLY 135 >gi|220933874|ref|YP_002512773.1| Flagellar basal body-associated protein-like protein [Thioalkalivibrio sp. HL-EbGR7] gi|219995184|gb|ACL71786.1| Flagellar basal body-associated protein-like protein [Thioalkalivibrio sp. HL-EbGR7] Length = 134 Score = 47.4 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 13/102 (12%), Positives = 30/102 (29%), Gaps = 9/102 (8%) Query: 44 NIIKSELVSIPSVSNGVLQAYFLVKLSFIVN---DSQERSYLKEIATDYLYTLLSGPPMG 100 I + + +++N Y + V D+ + D L G Sbjct: 32 PYIALDPPLVVNLANPTRAQYLQIVAELQVESPEDAAAVQTHMPVIRDTLLVFFGGRDPA 91 Query: 101 DFVQIKAFGFDNLRKK----IKEDLNSRLGSQFISEVLIDEL 138 + ++ + LR + I+ L + G + + Sbjct: 92 EVRPVE--NREELRAEALGAIRAALETHSGRPAVDALYFTSF 131 >gi|117928061|ref|YP_872612.1| flagellar basal body-associated protein FliL [Acidothermus cellulolyticus 11B] gi|117648524|gb|ABK52626.1| flagellar basal body-associated protein FliL [Acidothermus cellulolyticus 11B] Length = 156 Score = 47.4 bits (111), Expect = 9e-04, Method: Composition-based stats. Identities = 17/135 (12%), Positives = 39/135 (28%), Gaps = 6/135 (4%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAY 64 + + V + + + K ++ + V++ L+ Sbjct: 26 ILIILLAVAVLAGG--YVVMGKKSHHPAKTGAAVQEKPGPLVAVDAVTVNLAGGHYLR-- 81 Query: 65 FLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSR 124 + L F S+ + ATD + +G G G ++++ + + Sbjct: 82 IGLALQFTTKTSKTQPPDPAPATDVVIQYFTGKDPGPLQTPA--GLKQAKEELTKAIAQV 139 Query: 125 LGSQFISEVLIDELN 139 I EVL Sbjct: 140 YPKDPILEVLFTSFV 154 >gi|91227495|ref|ZP_01261832.1| hypothetical protein V12G01_09607 [Vibrio alginolyticus 12G01] gi|269968651|ref|ZP_06182648.1| flagellar protein FliL, putative [Vibrio alginolyticus 40B] gi|91188519|gb|EAS74811.1| hypothetical protein V12G01_09607 [Vibrio alginolyticus 12G01] gi|269826738|gb|EEZ81075.1| flagellar protein FliL, putative [Vibrio alginolyticus 40B] Length = 136 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 40/129 (31%), Gaps = 12/129 (9%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIV---ND 75 + L + E ++ + G Y V++ +V D Sbjct: 11 FALTILFAAPSWAETEEAGPK--LAYFTLEPDLTTNFYTKGKKLGYVQVRIDIMVMSQQD 68 Query: 76 SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFIS 131 + + + D + LL + ++LRK + LN L G I+ Sbjct: 69 LSVVEHHQPLIRDAVIELLGKQTEDTIKSLSGR--EDLRKTLVTTLNETLLPETGKTIIA 126 Query: 132 EVLIDELNY 140 ++L + Y Sbjct: 127 DLLFTKYLY 135 >gi|168699682|ref|ZP_02731959.1| hypothetical protein GobsU_09174 [Gemmata obscuriglobus UQM 2246] Length = 170 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 24/156 (15%), Positives = 50/156 (32%), Gaps = 22/156 (14%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAI----------KNTNIIKSELVS 52 K + + + + + + + + + T I+ V Sbjct: 16 KLILIIVCLVALGGGAVVPMAMGGVPPFGKKAEGEKDKDKAPKKKPAESKTAIVPFGDVV 75 Query: 53 IPSVSNGVLQAYFLVKLSFIVNDSQERSYL------KEIATDYLYTLLSGPPMGDFVQIK 106 + V Q Y +K++ +V+ E+ K L L+G D Sbjct: 76 VNLVEE-RQQRYLRLKIAVLVDAEAEKEVTAMVTAKKAAVKSALIGHLAGKSTKDVS--G 132 Query: 107 AFGFDNLRKKIKEDLNSRL---GSQFISEVLIDELN 139 + G +++++ E + L GS I VL +E Sbjct: 133 SVGVQRMQRELLERIEEVLYPDGSSRIRAVLFEEYV 168 >gi|157692310|ref|YP_001486772.1| flagellar basal body-associated protein FliL [Bacillus pumilus SAFR-032] gi|157681068|gb|ABV62212.1| flagellar protein FliL [Bacillus pumilus SAFR-032] Length = 142 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/117 (14%), Positives = 37/117 (31%), Gaps = 8/117 (6%) Query: 26 SMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI 85 D P ++ + S G + L+ + + + L++ Sbjct: 29 GSDEAKAEKEPTADEVVKASVEIPEIITNLKSEGNA---VKLVLNIETDSEKAKEELEKR 85 Query: 86 ---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 D + +LS + G ++ + +K +N+ L + EV I N Sbjct: 86 SFQVKDAVIDILSDTNADELD--GKKGREHFKTLVKNKVNNYLQDGKVKEVYITSFN 140 >gi|153835508|ref|ZP_01988175.1| flagellar basal body-associated protein FliL [Vibrio harveyi HY01] gi|156972622|ref|YP_001443529.1| flagellar basal body-associated protein FliL-like protein [Vibrio harveyi ATCC BAA-1116] gi|148867921|gb|EDL67133.1| flagellar basal body-associated protein FliL [Vibrio harveyi HY01] gi|156524216|gb|ABU69302.1| hypothetical protein VIBHAR_00274 [Vibrio harveyi ATCC BAA-1116] Length = 136 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 43/129 (33%), Gaps = 12/129 (9%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIV---ND 75 + L L + E ++ + G Y V++ +V D Sbjct: 11 FALSLLTSAPSWAESEEAAPK--LAYFTLEPDLTTNFYTKGNKLGYVQVRMDIMVMSQQD 68 Query: 76 SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFIS 131 + + + D + LL + ++LRK + ++LN L G I+ Sbjct: 69 LAVIEHHQPLIRDAVIELLGKQTEDTIKSLSGR--EDLRKTLVKELNETLLPETGKTIIA 126 Query: 132 EVLIDELNY 140 ++L + Y Sbjct: 127 DLLFTKYLY 135 >gi|295688786|ref|YP_003592479.1| flagellar basal body-associated protein FliL [Caulobacter segnis ATCC 21756] gi|295430689|gb|ADG09861.1| flagellar basal body-associated protein FliL [Caulobacter segnis ATCC 21756] Length = 202 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/109 (16%), Positives = 33/109 (30%), Gaps = 5/109 (4%) Query: 32 ENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKE---IATD 88 V + + + + +KL+F + D + L D Sbjct: 92 PAPVIKEGPDGVVFYTLPDIVVNMQTADGKSTFLKLKLTFELPDEETAEALTPNLPRLQD 151 Query: 89 YLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 T L D + G LR ++ +N ++ VLI+E Sbjct: 152 MFQTFLRELRPEDLN--GSQGTYQLRVELLRRVNLVAAPAKVNAVLIEE 198 >gi|332981444|ref|YP_004462885.1| flagellar basal body-associated protein FliL [Mahella australiensis 50-1 BON] gi|332699122|gb|AEE96063.1| flagellar basal body-associated protein FliL [Mahella australiensis 50-1 BON] Length = 143 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/139 (13%), Positives = 42/139 (30%), Gaps = 8/139 (5%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 L++ + + +V + S D +N +K ++ + Sbjct: 8 LLWTAMIVVLVAAVIIAYYMASSNDASGQNIAEKKTEIFMPTVKDGSFVTNLKNS---RH 64 Query: 64 YFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 + V + V +S D + ++LS D + L+ +I Sbjct: 65 FLKVTMVIEVANSAILDEFTSKDYMVNDIIVSVLSSKT--DEESAEDGFQSKLKNEIISA 122 Query: 121 LNSRLGSQFISEVLIDELN 139 LN + G + +E Sbjct: 123 LNKKFGEGAAVNIYFNEFV 141 >gi|319898642|ref|YP_004158735.1| flagellar basal body-associated protein FliL [Bartonella clarridgeiae 73] gi|319402606|emb|CBI76151.1| Flagellar basal body-associated protein FliL [Bartonella clarridgeiae 73] Length = 166 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 29/146 (19%), Positives = 58/146 (39%), Gaps = 13/146 (8%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVE----NHVPPLAIKNTNIIKSELVSI---PSV 56 FL G+ +++V IS + L MV + PP+ ++ ++ + P + Sbjct: 21 FLIVGLVLTLVAAISGWFLGAWVSREMVPISNSSKEPPVVKTPEYLVAADSHVVILPPIL 80 Query: 57 SNGVL--QAYFLVKLSFIV-NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113 +N + A+ +++S I+ + + L ++ T L + G NL Sbjct: 81 TNIAMPENAWIRMEVSLIIKPNENIEATLTADISNDFLTFLRQVTIDQVKGPS--GLMNL 138 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELN 139 R + + R G +S +LI L Sbjct: 139 RADLLDRARIRSG-NKVSNILISSLV 163 >gi|92114084|ref|YP_574012.1| flagellar basal body-associated protein FliL [Chromohalobacter salexigens DSM 3043] gi|91797174|gb|ABE59313.1| flagellar basal body-associated protein FliL [Chromohalobacter salexigens DSM 3043] Length = 165 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 38/133 (28%), Gaps = 18/133 (13%) Query: 18 SFY-MLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDS 76 Y + R + E P +K E +I S+ V LS V D Sbjct: 36 GVYLFMDSRQQASANEETTEPKEAPAPIFVKIEPFTINLQSDEYSDRLLYVGLSLKVGDE 95 Query: 77 QER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF---- 129 R L LLSG ++ + ++++ + + Sbjct: 96 TTRAFLEEYMPEVRSRLLMLLSGQQADTLIKPEG------KQRLANQILAMFDEPLTEPQ 149 Query: 130 ----ISEVLIDEL 138 ++ VL E Sbjct: 150 PSLDVTGVLFSEF 162 >gi|187935791|ref|YP_001885054.1| flagellar basal body-associated protein FliL [Clostridium botulinum B str. Eklund 17B] gi|187723944|gb|ACD25165.1| flagellar basal body-associated protein FliL [Clostridium botulinum B str. Eklund 17B] Length = 159 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 14/142 (9%), Positives = 46/142 (32%), Gaps = 9/142 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 +K + ++++ + V + + + ++ ++++ Sbjct: 19 MKTIII-FVVALLLVGGGVFGTTYIFMQKNAKIVVQESAIDITYVDMGEITA-NLADEGG 76 Query: 62 QAYFLVKLSFIVND-----SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 + YF ++S + E K + D + L + ++ + Sbjct: 77 KRYFKGQISIGYDKTDKDAETELKEKKVVVRDSIIFYLKSLKIDYINDTNNE--KEIKVQ 134 Query: 117 IKEDLNSRLGSQFISEVLIDEL 138 + + +N +L I +V D + Sbjct: 135 LMDKINKQLTKSKIVDVRFDSI 156 >gi|86148639|ref|ZP_01066920.1| flagellar basal body-associated protein [Vibrio sp. MED222] gi|218710912|ref|YP_002418533.1| flagellar basal body-associated protein FliL-like protein [Vibrio splendidus LGP32] gi|85833558|gb|EAQ51735.1| flagellar basal body-associated protein [Vibrio sp. MED222] gi|218323931|emb|CAV20292.1| putative flagellar protein FliL [Vibrio splendidus LGP32] Length = 135 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 41/114 (35%), Gaps = 10/114 (8%) Query: 35 VPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYL 90 + E ++ + G Y V+L +V ND + + + + D + Sbjct: 23 AEEESTPKLAYFTLEPDLTTNFYTKGKKLGYIQVRLDIMVANSNDLEAIEHHQPLIRDAV 82 Query: 91 YTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEVLIDELNY 140 LL + ++LRK + E LN L G I+++L + Y Sbjct: 83 IELLGKQNEETIKSLSGR--EDLRKSLVEHLNKILLPETGKTLIADLLFTKYLY 134 >gi|94314216|ref|YP_587425.1| flagellar biosynthesis protein; flagellar basal body-associated protein [Cupriavidus metallidurans CH34] gi|93358068|gb|ABF12156.1| flagellar biosynthesis protein; flagellar basal body-associated protein [Cupriavidus metallidurans CH34] Length = 171 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 23/145 (15%), Positives = 45/145 (31%), Gaps = 11/145 (7%) Query: 3 KFLFSGIWISVVTLI-SFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + L G + VV L ++L + + + + ++ S Sbjct: 28 RLLLIGGGVLVVALGVGGFVLGNIIGGSRQPAAPAAPVVPPPIFVPLDAFTVNLKSEDG- 86 Query: 62 QAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 + LS V DS ++ L A + LLS D ++ L + I+ Sbjct: 87 DRFLHTGLSLKVADSDTQARLSQYLPEARSRILLLLSARQPADLATVEGK--QKLARDIQ 144 Query: 119 EDLNSRLGSQ----FISEVLIDELN 139 ++ + I +VL Sbjct: 145 ATISQPFAAGLPPQKILDVLFTSFV 169 >gi|28899724|ref|NP_799329.1| flagellar basal body-associated protein FliL-like protein [Vibrio parahaemolyticus RIMD 2210633] gi|153839845|ref|ZP_01992512.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus AQ3810] gi|260361675|ref|ZP_05774702.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus K5030] gi|260879363|ref|ZP_05891718.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus AN-5034] gi|260897190|ref|ZP_05905686.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus Peru-466] gi|28807976|dbj|BAC61213.1| putative flagellar protein FliL [Vibrio parahaemolyticus RIMD 2210633] gi|149746640|gb|EDM57628.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus AQ3810] gi|308089320|gb|EFO39015.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus Peru-466] gi|308092826|gb|EFO42521.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus AN-5034] gi|308111288|gb|EFO48828.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus K5030] gi|328472449|gb|EGF43315.1| flagellar basal body-associated protein FliL-like protein [Vibrio parahaemolyticus 10329] Length = 136 Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 42/129 (32%), Gaps = 12/129 (9%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIV---ND 75 + L + E ++ + G Y V++ +V D Sbjct: 11 FALTILISAPSWAETEETGPK--LAYFTLEPDLTTNFYTKGKKLGYVQVRIDIMVMSQQD 68 Query: 76 SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFIS 131 + + + D + LL + ++LRK + ++LN L G I+ Sbjct: 69 LAIVEHHQPLIRDAVIELLGKQTEDTIKSLSGR--EDLRKTLVKELNETLLPETGKTVIA 126 Query: 132 EVLIDELNY 140 ++L + Y Sbjct: 127 DLLFTKYLY 135 >gi|118443258|ref|YP_877987.1| flagellar protein FliL [Clostridium novyi NT] gi|118133714|gb|ABK60758.1| flagellar protein FliL [Clostridium novyi NT] Length = 162 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 45/147 (30%), Gaps = 12/147 (8%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKN---TNIIKSELVSIPSVSN 58 K + ++ + ++ + T V + + + S+ Sbjct: 15 FKVILVVFLAVILLGGGVFAGYMVASKTNPRGVVINTVQQETLNLKTFGLDEFLLNLKSD 74 Query: 59 GVLQAYFLVKLSFIVNDSQERSYLK-------EIATDYLYTLLSGPPMGDFVQIKAFGFD 111 Y +S D +E L+ I D + ++L DF + Sbjct: 75 DNSSRYLKTNISIGYADVKENKELEGELKDKKAIIRDTINSVLRSKKKEDFATNEQVEKI 134 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDEL 138 K+IK+ +N L + I V E+ Sbjct: 135 K--KEIKDKINPLLQNGQIYNVYFSEI 159 >gi|283834439|ref|ZP_06354180.1| flagellar basal body-associated protein FliL [Citrobacter youngae ATCC 29220] gi|291069986|gb|EFE08095.1| flagellar basal body-associated protein FliL [Citrobacter youngae ATCC 29220] Length = 156 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/155 (12%), Positives = 49/155 (31%), Gaps = 15/155 (9%) Query: 1 MLKFLFSGIWISVVTLI-------SFYMLF----LRSMDTMVENHVPPLAIKNTNIIKSE 49 M K + + + SVV L Y + + ++ + Sbjct: 1 MKKIVIACLISSVVALGIAGGAGWGVYHYMKKGTTAAAEKPAHEAEDSQDESSSIFVSLP 60 Query: 50 LVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIK 106 + N Y + +L +V+ ++ + + + LS D +K Sbjct: 61 ETVVTLHDNEGGDRYMVAELVMVVDTEKDAEKIKKDEPLYQSITVDELSNMKYEDIRALK 120 Query: 107 AFGF-DNLRKKIKEDLNSRLGSQFISEVLIDELNY 140 + + +K +L R + ++L+ ++ + Sbjct: 121 ISEIRKKIFENLKAELAKRKMATPYKDILVKKVVF 155 >gi|194015067|ref|ZP_03053684.1| flagellar basal body-associated protein FliL [Bacillus pumilus ATCC 7061] gi|194014093|gb|EDW23658.1| flagellar basal body-associated protein FliL [Bacillus pumilus ATCC 7061] Length = 142 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/117 (13%), Positives = 37/117 (31%), Gaps = 8/117 (6%) Query: 26 SMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI 85 + P ++ + S G + L+ + + + L++ Sbjct: 29 GSEEAKAEKEPTADEVVKASVEIPEIITNLKSEGNA---VKLVLNIETDSEKAKEELEKR 85 Query: 86 ---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 D + +LS + G ++ + +K +N+ L + EV I N Sbjct: 86 SFQVKDAVIDILSDTNADELD--GKKGREHFKTLVKNKVNNYLQDGKVKEVYITSFN 140 >gi|15895421|ref|NP_348770.1| flagellar protein FliL [Clostridium acetobutylicum ATCC 824] gi|15025144|gb|AAK80110.1|AE007715_15 Flagellar protein FliL [Clostridium acetobutylicum ATCC 824] Length = 171 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 17/141 (12%) Query: 13 VVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVS----IPSVSNGVLQAYFLVK 68 + ++++ +F + T A ++ S + ++++ Y V Sbjct: 31 IAAALAYFFVFSKKSPTSTNTTATNAATTTEANVEENTYSFEEILTNLADTDGAKYIKVT 90 Query: 69 LS--FIVNDSQERSYLK--------EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 ++ + +S+ + L+ I D + +L DF D ++K+IK Sbjct: 91 VAVGYSSKNSKLKEELEDTKEDIKTPIMRDIIVNVLRSKKAADFTPTG---IDQMKKEIK 147 Query: 119 EDLNSRLGSQFISEVLIDELN 139 E +N L + I V L Sbjct: 148 EGINPHLKNGQIDNVYFSNLV 168 >gi|238796937|ref|ZP_04640441.1| Flagellar basal body-associated protein [Yersinia mollaretii ATCC 43969] gi|238719197|gb|EEQ11009.1| Flagellar basal body-associated protein [Yersinia mollaretii ATCC 43969] Length = 183 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/147 (12%), Positives = 40/147 (27%), Gaps = 13/147 (8%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLA---IKNTNIIKSELVSI---PS 55 L + I + + + + + I + ++ P+ Sbjct: 37 LLLMLISIAACALA-GYTFYEIKNMKANAPDEGKKTASVKIPETPLYIPMDTFTVSLKPT 95 Query: 56 VSNGVLQAYFLVKLSFIVNDSQER-SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 + Y + L DS+ L +L+ D L Sbjct: 96 STESDRVLYIGLTLRVKDEDSKLLVEKFLPEIRSRLLMILAHQTAEDLSVDDGKN--QLI 153 Query: 115 KKIKEDLNSRLGSQF---ISEVLIDEL 138 +KIK ++ L I++VL + Sbjct: 154 EKIKSVVSKPLAPNQSVMITDVLFNAF 180 >gi|84394331|ref|ZP_00993054.1| putative flagellar protein FliL [Vibrio splendidus 12B01] gi|84375061|gb|EAP91985.1| putative flagellar protein FliL [Vibrio splendidus 12B01] Length = 135 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 22/114 (19%), Positives = 40/114 (35%), Gaps = 10/114 (8%) Query: 35 VPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYL 90 + E ++ + G Y V+L +V ND + + + D + Sbjct: 23 AEEESAPKLAYFTLEPDLTTNFYTKGKKLGYIQVRLDIMVANSNDLAAIEHHQPLIRDAV 82 Query: 91 YTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEVLIDELNY 140 LL + ++LRK + E LN L G I+++L + Y Sbjct: 83 IELLGKQNEETIKSLSGR--EDLRKTLVEHLNKVLLPETGKTLIADLLFTKYLY 134 >gi|283850188|ref|ZP_06367477.1| flagellar basal body-associated protein FliL [Desulfovibrio sp. FW1012B] gi|283574214|gb|EFC22185.1| flagellar basal body-associated protein FliL [Desulfovibrio sp. FW1012B] Length = 149 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/96 (14%), Positives = 31/96 (32%), Gaps = 4/96 (4%) Query: 46 IKSELVSIPSVSNGVLQAYFLVKLSFI-VNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ 104 I V++ +SN + + + + + A + L LS D + Sbjct: 56 IDLGPVTVNVLSN-RGFRFLRLSMQVQCETNEEAERLTLPDAKEDLVFFLSSKMAEDLLG 114 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNY 140 LR+ + E + G+ + + E + Sbjct: 115 NPGKMI--LRRDLTELFSKYAGAGKVKNIFFTEFVF 148 >gi|83955114|ref|ZP_00963770.1| Flagellar basal body-associated protein FliL [Sulfitobacter sp. NAS-14.1] gi|83840443|gb|EAP79616.1| Flagellar basal body-associated protein FliL [Sulfitobacter sp. NAS-14.1] Length = 212 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 24/183 (13%), Positives = 46/183 (25%), Gaps = 49/183 (26%) Query: 3 KFLFSGIWISVVTLISFYMLFLRS------------------------------------ 26 K L + + VV+L + L + Sbjct: 29 KMLIAAALMCVVSLGGGFFLARAAYVKDAEAFEPEYKSEEADQTDTKDDHADTEDHGKDD 88 Query: 27 ---MDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV----LQAYFLVKLSFIVNDSQER 79 + E+H +T +I + A+ V L Sbjct: 89 HAKDEGDAEDHADDTKAASTGLIDLGEMLTNIQGFDQNGTPTSAFLKVNLMVAYRPDAGA 148 Query: 80 SYLK----EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLI 135 L D L G D + + ++ ++ + + +GS E+LI Sbjct: 149 DKLMVERQPFMRDLFNGYLRGLTENDVRGMAGILY--IKAELLKRARAAVGSDLPQEILI 206 Query: 136 DEL 138 +L Sbjct: 207 KDL 209 >gi|326793916|ref|YP_004311736.1| flagellar basal body-associated protein FliL [Marinomonas mediterranea MMB-1] gi|326544680|gb|ADZ89900.1| flagellar basal body-associated protein FliL [Marinomonas mediterranea MMB-1] Length = 146 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 41/146 (28%), Gaps = 15/146 (10%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNG 59 M+K W + +S ++ L A I+ + + G Sbjct: 7 MIK------WYRIKAHLSVFVFVLSIFIVPAVQAEDEAAAPMPVYIELTPDFIVNYTAGG 60 Query: 60 VLQAYFLVKLSFIVNDSQERSY--LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 Y K+S + + + D + LS A + R++ Sbjct: 61 GKLRYIKTKISLRSSSDMAGAIEGNMPMVRDAIVMFLSSRTQEQVS--GALAREKTREEA 118 Query: 118 KEDLNSRL----GSQFISEVLIDELN 139 +N L G + + +VL Sbjct: 119 AIAVNEALKEETGIEPVKDVLFASFV 144 >gi|311105954|ref|YP_003978807.1| flagellar FliL protein [Achromobacter xylosoxidans A8] gi|310760643|gb|ADP16092.1| flagellar FliL protein [Achromobacter xylosoxidans A8] Length = 187 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 39/118 (33%), Gaps = 10/118 (8%) Query: 29 TMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQ---ERSYLKEI 85 T V P+A+ + E ++ + N + V L+ V+D Q Sbjct: 71 TFVAPPASPIAVPAPIFVPIEPFTVT-LQNPDTERIMHVGLTLRVSDEQTRTRLEKYMPE 129 Query: 86 ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLG----SQFISEVLIDELN 139 + +LS + ++ IK+ +N Q++++VL Sbjct: 130 VRSRILMVLSSQSPTGVQTQQGK--TDMANAIKQAVNRPFSPLPDGQYVTDVLYTAFV 185 >gi|34498586|ref|NP_902801.1| flagellar fliL transmembrane protein [Chromobacterium violaceum ATCC 12472] gi|34104440|gb|AAQ60798.1| flagellar fliL transmembrane protein [Chromobacterium violaceum ATCC 12472] Length = 151 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 12/135 (8%), Positives = 32/135 (23%), Gaps = 17/135 (12%) Query: 17 ISFYMLFLR-------SMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKL 69 + V+ K + + N + + + Sbjct: 16 GGLAAYMFTNMNKPAGAQAEQVQEKPKKKHEGPPIFEKMDTFVVNLAGNDG--SLLQIDM 73 Query: 70 SFIVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL- 125 + D + + + LLS + + L+ ++K+ +N + Sbjct: 74 QAELGDEEAKKKFADYAPKVRSAVILLLSSKTAAEVSTAEGK--VKLKAQVKQIINEAMD 131 Query: 126 --GSQFISEVLIDEL 138 + VL Sbjct: 132 AGEEPVVESVLFTSF 146 >gi|283782104|ref|YP_003372859.1| flagellar basal body-associated protein FliL [Pirellula staleyi DSM 6068] gi|283440557|gb|ADB18999.1| flagellar basal body-associated protein FliL [Pirellula staleyi DSM 6068] Length = 166 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/168 (11%), Positives = 44/168 (26%), Gaps = 34/168 (20%) Query: 1 MLKFLFSGIWI---SVVTLISFYMLFLR-----SMDTMVENHVPPLA------------I 40 ML + + I V Y+L + T A Sbjct: 4 MLVMIVVCVVILTECAVA----YVLIPSPEALEAAATKSSEEAEKAASDASTTTDGTTPT 59 Query: 41 KNTNIIKSELVSIPSVSNG-VLQAYFLVKLSFIVNDSQERSYLKE------IATDYLYTL 93 + ++ G L L V + + K D + Sbjct: 60 AAEMEVDLGKFNVVVHQPGANLTLRINFHLIGTVPSEKHEEFGKLLTHNQHRLRDQIIYE 119 Query: 94 LSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYL 141 + + D ++++I N LG+ ++ V+ + +++ Sbjct: 120 IRNSAIADLTDPG---LGLIKRRILAKSNDLLGAPMLTTVVFSDFSFI 164 >gi|183219623|ref|YP_001837619.1| flagellar FliL protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] gi|189909762|ref|YP_001961317.1| endoflagellar basal body-associated protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167774438|gb|ABZ92739.1| Endoflagellar basal body-associated protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)'] gi|167778045|gb|ABZ96343.1| Flagellar FliL protein [Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'] Length = 175 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 23/133 (17%), Positives = 43/133 (32%), Gaps = 11/133 (8%) Query: 14 VTLISFYMLFLRSMDTMVENH-----VPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVK 68 VT+IS ++ + + P ++ + V+ V + Sbjct: 43 VTVISMFVAQKTATSVFKQQKNISLVKAPPPLEVYTFQEEFRVNTSDVGESHFVK-LKMS 101 Query: 69 LSFIVNDSQERSYLKEIA---TDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL 125 L F + L + + +++ D I +LR++IK LN L Sbjct: 102 LGFESGQPALSAELAARVAQMQNIINLVIARKTKDDLKSIT--NQLDLREEIKAHLNHIL 159 Query: 126 GSQFISEVLIDEL 138 + I EV E Sbjct: 160 TNGKIKEVYFTEF 172 >gi|288960147|ref|YP_003450487.1| flagellar basal body-associated protein [Azospirillum sp. B510] gi|288912455|dbj|BAI73943.1| flagellar basal body-associated protein [Azospirillum sp. B510] Length = 167 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/143 (9%), Positives = 42/143 (29%), Gaps = 11/143 (7%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK-----NTNIIKSELVSIPSVS 57 + + + + +++ + L P I+ +++ ++ Sbjct: 24 QIILALLGLTLAFAGASAGSLLLLRPAPAHGAYAPPRIEAQQAAPAVYAALPTLTVT-LN 82 Query: 58 NGVLQAYFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR 114 +G V++ + + D + L + A G ++ Sbjct: 83 DGGRLQELRVRVVLEFDPATPLETVTPHLPRIADAISRRLLEADPAELR--GAEGPLYVK 140 Query: 115 KKIKEDLNSRLGSQFISEVLIDE 137 ++ N + + +VLI + Sbjct: 141 DALRYVANKTMRPLKLRQVLIQD 163 >gi|315498451|ref|YP_004087255.1| flagellar basal body-associated protein flil [Asticcacaulis excentricus CB 48] gi|315416463|gb|ADU13104.1| flagellar basal body-associated protein FliL [Asticcacaulis excentricus CB 48] Length = 218 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 22/112 (19%), Positives = 32/112 (28%), Gaps = 5/112 (4%) Query: 29 TMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EI 85 V + Y +KL+F V D + L Sbjct: 105 DPKTQPVIAEGPDGITYFTLPDTLANIQTTNGKATYLKLKLTFEVADHETVELLNQSLPR 164 Query: 86 ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 D L L D + G LR +I +N L ++ VLI+E Sbjct: 165 IDDVLQGFLRELRPEDV--TGSQGSYQLRLEILRRVNLVLAPHKVNAVLIEE 214 >gi|126653738|ref|ZP_01725656.1| flagellar basal body-associated protein FliL [Bacillus sp. B14905] gi|126589702|gb|EAZ83838.1| flagellar basal body-associated protein FliL [Bacillus sp. B14905] Length = 142 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/138 (10%), Positives = 41/138 (29%), Gaps = 4/138 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 ML + + ++ + ++L + I ++ ++ V Sbjct: 6 MLTMIIILLVAVILIGVILFVLLTQFNKPTGAIEPTIDEIVE-ATVEIPEITTNLADKRV 64 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 ++ V+ + + + E + + LS D + +K +K Sbjct: 65 VRLSLKVQTT-SKDAAAELTKRVFQVQNIAIQELSEMEQKDLEGKQGKQI--FQKSLKTR 121 Query: 121 LNSRLGSQFISEVLIDEL 138 +N + + EV Sbjct: 122 VNELMQEGEVQEVYFTSF 139 >gi|299534776|ref|ZP_07048106.1| flagellar fliL protein [Lysinibacillus fusiformis ZC1] gi|298729864|gb|EFI70409.1| flagellar fliL protein [Lysinibacillus fusiformis ZC1] Length = 142 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/138 (10%), Positives = 41/138 (29%), Gaps = 4/138 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 ML + + ++ + ++L + I ++ ++ V Sbjct: 6 MLTMIIILLVAVILIGVILFVLLTQFNKPTGAVEPSIDEIVE-ATVEIPEITTNLADKRV 64 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 ++ ++ + + + E + + LS D + +K +K Sbjct: 65 VRLSLKIQTT-SKDAAAELTKRVFQVQNIAIQELSEMEQKDLEGKQGKQI--FQKSLKTR 121 Query: 121 LNSRLGSQFISEVLIDEL 138 LN + + EV Sbjct: 122 LNELMQEGEVQEVYFTSF 139 >gi|319406981|emb|CBI80618.1| Flagellar basal body-associated protein FliL [Bartonella sp. 1-1C] Length = 166 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 27/146 (18%), Positives = 53/146 (36%), Gaps = 13/146 (8%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVEN----HVPPLAIKNTNIIKSELVSI---PSV 56 FL G +++V +S + L M P+ N+I ++ + P + Sbjct: 21 FLIVGFVLTLVAAVSGWFLGAWVSREMAPTSSNLKELPMTKTPENLIAADSHIVTLPPIL 80 Query: 57 SNGVL--QAYFLVKLSFIV-NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113 +N + A+ +++S ++ D S L ++ L + G NL Sbjct: 81 TNIAVPENAWIRMEVSLVIKPDENIESTLTADISNDFLAFLRQVTIDQVKGPS--GLMNL 138 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELN 139 R + + R +S +LI L Sbjct: 139 RADLLDRARVR-SDNKVSNILISSLV 163 >gi|226941272|ref|YP_002796346.1| FliL [Laribacter hongkongensis HLHK9] gi|226716199|gb|ACO75337.1| FliL [Laribacter hongkongensis HLHK9] Length = 162 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 24/123 (19%), Positives = 40/123 (32%), Gaps = 8/123 (6%) Query: 21 MLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSV-SNGVLQAYFLVKLSFIVNDSQER 79 LFL D + P A K + + + VLQ V+LS + Sbjct: 38 YLFLNKPDPAAAHEAAPAAKHVPVFEKIDTFVVNLGGHDTVLQTELQVELSDEAGREMLK 97 Query: 80 SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGS----QFISEVLI 135 Y+ + L LLS + + LR +I+ +N L + V+ Sbjct: 98 QYM-PRIRNNLIMLLSSKTADEVATAEGKA--RLRGQIRSVINESLAETGRRDVVRSVVF 154 Query: 136 DEL 138 + Sbjct: 155 NSF 157 >gi|262392918|ref|YP_003284772.1| flagellar biosynthesis protein FliL [Vibrio sp. Ex25] gi|262336512|gb|ACY50307.1| flagellar biosynthesis protein FliL [Vibrio sp. Ex25] Length = 136 Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 40/129 (31%), Gaps = 12/129 (9%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIV---ND 75 + L + E ++ + G Y V++ +V D Sbjct: 11 FALTILFAAPSWAETQEAGPK--LAYFTLEPDLTTNFYTKGKKLGYVQVRIDIMVMSQQD 68 Query: 76 SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFIS 131 + + + D + LL + ++LRK + LN L G I+ Sbjct: 69 LSIVEHHQPLIRDAVIELLGKQTEDTIKSLSGR--EDLRKTLVTTLNETLLPETGKTIIA 126 Query: 132 EVLIDELNY 140 ++L + Y Sbjct: 127 DLLFTKYLY 135 >gi|169827131|ref|YP_001697289.1| flagellar fliL protein [Lysinibacillus sphaericus C3-41] gi|168991619|gb|ACA39159.1| Flagellar fliL protein [Lysinibacillus sphaericus C3-41] Length = 137 Score = 46.6 bits (109), Expect = 0.002, Method: Composition-based stats. Identities = 15/138 (10%), Positives = 41/138 (29%), Gaps = 4/138 (2%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 ML + + ++ + ++L + I ++ ++ V Sbjct: 1 MLTMIIILLVAVILIGVILFVLLTQFNKPTGAIEPTIDEIVE-ATVEIPEITTNLADKRV 59 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 ++ V+ + + + E + + LS D + +K +K Sbjct: 60 VRLSLKVQTT-SKDAAAELTKRVFQVQNIAIQELSEMEQKDLEGKQGKQI--FQKSLKTR 116 Query: 121 LNSRLGSQFISEVLIDEL 138 +N + + EV Sbjct: 117 VNELMQEGEVQEVYFTSF 134 >gi|288941942|ref|YP_003444182.1| flagellar basal body-associated protein FliL [Allochromatium vinosum DSM 180] gi|288897314|gb|ADC63150.1| flagellar basal body-associated protein FliL [Allochromatium vinosum DSM 180] Length = 140 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 11/103 (10%) Query: 43 TNIIKSELVSIPSVSNGVLQAYFLVKLSF---IVNDSQERSYLKEIATDYLYTLLSGPPM 99 + E I +++ +Y + L F D+ + D + +LL G Sbjct: 39 PGYMALEPPLIVNLAKPR--SYLKLSLQFFIETQTDADLITLHMPRLRDRMISLLGGRDG 96 Query: 100 GDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEVLIDEL 138 + +A + LR ++ + L + G IS V + Sbjct: 97 EQIMTTEAR--EQLRIELLDSLRKTMMEQTGRPAISAVYFTDF 137 >gi|89899367|ref|YP_521838.1| flagellar basal body-associated protein FliL [Rhodoferax ferrireducens T118] gi|89344104|gb|ABD68307.1| flagellar basal body-associated protein FliL [Rhodoferax ferrireducens T118] Length = 199 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 11/119 (9%), Positives = 35/119 (29%), Gaps = 12/119 (10%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVEN--------HVPPLAIKNTNIIKSELVS 52 ML + +G+ + V + + V + + + Sbjct: 30 MLIIVIAGVMVLVSAGGGAFFFISKKRAAAAVEGTGGASAVAVEAAPKGPPVYLPLDNMV 89 Query: 53 IPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAF 108 + ++++ + V ++ V D+ +K + L+S + + + Sbjct: 90 V-NLADPGGEKVAQVGITLQVVDAHASESVKAYLPSIRSGVLMLISQRTAAELLTQEGK 147 >gi|325509567|gb|ADZ21203.1| Flagellar protein FliL [Clostridium acetobutylicum EA 2018] Length = 173 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 23/141 (16%), Positives = 51/141 (36%), Gaps = 17/141 (12%) Query: 13 VVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVS----IPSVSNGVLQAYFLVK 68 + ++++ +F + T A ++ S + ++++ Y V Sbjct: 33 IAAALAYFFVFSKKSPTSTNTTATNAATTTEANVEENTYSFEEILTNLADTDGAKYIKVT 92 Query: 69 LS--FIVNDSQERSYLK--------EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 ++ + +S+ + L+ I D + +L DF D ++K+IK Sbjct: 93 VAVGYSSKNSKLKEELEDTKEDIKTPIMRDIIVNVLRSKKAADFTPTG---IDQMKKEIK 149 Query: 119 EDLNSRLGSQFISEVLIDELN 139 E +N L + I V L Sbjct: 150 EGINPHLKNGQIDNVYFSNLV 170 >gi|260899143|ref|ZP_05907538.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus AQ4037] gi|308107502|gb|EFO45042.1| flagellar basal body-associated protein FliL [Vibrio parahaemolyticus AQ4037] Length = 136 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 20/129 (15%), Positives = 42/129 (32%), Gaps = 12/129 (9%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIV---ND 75 + L + E ++ + G Y V++ +V D Sbjct: 11 FALTILISAPSWAETEETGPK--LAYFTIEPDLTTNFYTKGKKLGYVQVRIDIMVMSQQD 68 Query: 76 SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFIS 131 + + + D + LL + ++LRK + ++LN L G I+ Sbjct: 69 LAIVEHHQPLIRDAVIELLGKQTEDTIKSLSGR--EDLRKTLVKELNETLLPETGKTVIA 126 Query: 132 EVLIDELNY 140 ++L + Y Sbjct: 127 DLLFTKYLY 135 >gi|302383954|ref|YP_003819777.1| flagellar basal body-associated protein FliL [Brevundimonas subvibrioides ATCC 15264] gi|302194582|gb|ADL02154.1| flagellar basal body-associated protein FliL [Brevundimonas subvibrioides ATCC 15264] Length = 223 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/101 (15%), Positives = 31/101 (30%), Gaps = 5/101 (4%) Query: 40 IKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSG 96 + + S + + L+ ++D++ + L D L Sbjct: 121 PDGITFYTLPDMVVNIQSPDGKPTFLKLTLTLEMHDAELATTLQGQMPRMQDMFQGFLRE 180 Query: 97 PPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 D + G LR +I +N + VLI+E Sbjct: 181 LRPEDIA--GSAGTYQLRAEILRRVNLIAAPSRVDAVLIEE 219 >gi|260767583|ref|ZP_05876519.1| flagellar biosynthesis protein FliL [Vibrio furnissii CIP 102972] gi|260617483|gb|EEX42666.1| flagellar biosynthesis protein FliL [Vibrio furnissii CIP 102972] Length = 126 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 10/116 (8%) Query: 33 NHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATD 88 H E ++ + G Y V++ +V D + + D Sbjct: 12 AHAEENEAPKFAYFTLEPDLTTNFYTKGKKLGYIQVRIDIMVASSTDLPLIETHQPLIRD 71 Query: 89 YLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEVLIDELNY 140 + LL + ++LRK + E LN+ L G + I+++L + Y Sbjct: 72 AVVELLGKQTEDTIKSLAGR--EDLRKTLVEQLNNILLTETGRRVIADLLFTKYIY 125 >gi|91976163|ref|YP_568822.1| flagellar basal body-associated protein FliL [Rhodopseudomonas palustris BisB5] gi|91682619|gb|ABE38921.1| flagellar basal body-associated protein FliL [Rhodopseudomonas palustris BisB5] Length = 167 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 17/125 (13%), Positives = 39/125 (31%), Gaps = 13/125 (10%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ-AYFLVKLSFIVNDSQE 78 + LF D +K + I+ + + + + Y K+ V D + Sbjct: 45 FFLFAGHKDDKHHAEAAE-KVKPPSFIEVPEIMVNLAGSPGERVQYLKAKIVLEVKDEKL 103 Query: 79 RS---YLKEIATDYLYTLLSGPPMGDFVQIK---AFGFDNLRKKIKEDLNSRLGSQFISE 132 TD L + + + G +++++ +N + +S Sbjct: 104 VEQIKPTMPRITD-----LFQTYLRELRSGDLNGSVGMFRMKEELTRRVNVAIAPAQVSA 158 Query: 133 VLIDE 137 +L E Sbjct: 159 LLFKE 163 >gi|74317624|ref|YP_315364.1| flagellar basal body-associated protein FliL [Thiobacillus denitrificans ATCC 25259] gi|74057119|gb|AAZ97559.1| probable flagellar transmembrane protein FliL [Thiobacillus denitrificans ATCC 25259] Length = 158 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 40/143 (27%), Gaps = 14/143 (9%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 F+ G + ++ A K + + ++ ++ +G + Sbjct: 21 FVLVGALVILLGAGGA--GAWYFTRDTGAGKPEAAAPKVPVFLALDTFTV-NLQDG--EQ 75 Query: 64 YFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 Y + ++ V D L +LLS + + + L +I Sbjct: 76 YLQLDITLQVADQAQIDAIKLHMPRVRSRLLSLLSSKHPDELMSPE--DKKKLTAEILAQ 133 Query: 121 LNSRLG----SQFISEVLIDELN 139 + Q I +VL Sbjct: 134 VKQPFEPKGKPQQIEDVLFTSFV 156 >gi|332294874|ref|YP_004436797.1| flagellar basal body-associated protein FliL [Thermodesulfobium narugense DSM 14796] gi|332177977|gb|AEE13666.1| flagellar basal body-associated protein FliL [Thermodesulfobium narugense DSM 14796] Length = 159 Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 11/72 (15%), Positives = 23/72 (31%), Gaps = 2/72 (2%) Query: 68 KLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGS 127 K+ L + +LS D + + + LR+ + + N +G Sbjct: 88 KVVLEPKAKPILDALTPELRNAAIIILSSQTYQDLITSQGK--ERLRQMLFQKFNQIVGR 145 Query: 128 QFISEVLIDELN 139 + +V L Sbjct: 146 DIVKDVYFTNLV 157 >gi|269961505|ref|ZP_06175868.1| flagellar protein FliL, putative [Vibrio harveyi 1DA3] gi|269833734|gb|EEZ87830.1| flagellar protein FliL, putative [Vibrio harveyi 1DA3] Length = 136 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/129 (16%), Positives = 42/129 (32%), Gaps = 12/129 (9%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIV---ND 75 + L L E ++ + G Y V++ +V D Sbjct: 11 FALSLLISAPSWAESEEAAPK--LAYFTLEPDLTTNFYTKGNKLGYVQVRIDIMVMSQQD 68 Query: 76 SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFIS 131 + + + D + LL + ++LRK + ++LN L G I+ Sbjct: 69 LAVVEHHQPLIRDAVIELLGKQTEDTIKSLSGR--EDLRKTLVKELNETLLPETGKTIIA 126 Query: 132 EVLIDELNY 140 ++L + Y Sbjct: 127 DLLFTKYLY 135 >gi|269965697|ref|ZP_06179810.1| polar flagellar protein FliL [Vibrio alginolyticus 40B] gi|269829765|gb|EEZ84001.1| polar flagellar protein FliL [Vibrio alginolyticus 40B] Length = 109 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 8/91 (8%), Positives = 24/91 (26%), Gaps = 5/91 (5%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVEN-----HVPPLAIKNTNIIKSELVSIPSV 56 L + + + ++ + + S + V + + +V Sbjct: 18 LLIIIIAVVVLLLGGGAAAFFLMGSDEPAQAESSQQAQVKASDAAPIAYVNLPQAFVFNV 77 Query: 57 SNGVLQAYFLVKLSFIVNDSQERSYLKEIAT 87 + +K +V Q+ + I Sbjct: 78 TGDSRDRLVQIKAQLMVRSVQKMKSWRGIIR 108 >gi|315178777|gb|ADT85691.1| flagellar protein FliL, hypothetical [Vibrio furnissii NCTC 11218] Length = 135 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/116 (18%), Positives = 40/116 (34%), Gaps = 10/116 (8%) Query: 33 NHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATD 88 H E ++ + G Y V++ +V D + + D Sbjct: 21 AHAEENEAPKFAYFTLEPDLTTNFYTKGKKLGYIQVRIDIMVASSTDLPLIETHQPLIRD 80 Query: 89 YLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEVLIDELNY 140 + LL + ++LRK + E LN+ L G + I+++L + Y Sbjct: 81 AVVELLGKQTEDTIKSLAGR--EDLRKTLVEQLNNILLTETGRRVIADLLFTKYIY 134 >gi|78044175|ref|YP_359849.1| flagellar basal body-associated protein FliL [Carboxydothermus hydrogenoformans Z-2901] gi|77996290|gb|ABB15189.1| flagellar basal body-associated protein FliL [Carboxydothermus hydrogenoformans Z-2901] Length = 156 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/151 (11%), Positives = 38/151 (25%), Gaps = 19/151 (12%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 L + I + L Y LF T I K + + ++++ Sbjct: 8 LLIVIVAIVAVLAGLGGAYFLF----GKNSGAAPKEPPPPPTVIAKLGDIVV-NLADKDT 62 Query: 62 QAYFLVKLSFIVNDS-----QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR-- 114 Y V ++ + + I D + L + V + Sbjct: 63 SRYLRVGINVEIEGEGEGATKVFEEKSVIFKDKVIAFLRSKESTELVGDNSSEKLKKELL 122 Query: 115 -------KKIKEDLNSRLGSQFISEVLIDEL 138 ++ + + + I V + Sbjct: 123 KILQDTAAELNKKVEKKSEKIVIVNVYFSDF 153 >gi|229544403|ref|ZP_04433461.1| flagellar basal body-associated protein FliL [Bacillus coagulans 36D1] gi|229324888|gb|EEN90565.1| flagellar basal body-associated protein FliL [Bacillus coagulans 36D1] Length = 140 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 21/144 (14%), Positives = 46/144 (31%), Gaps = 11/144 (7%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNT--NIIKSELVSIPSVSN 58 M K + + + V L++ + + + I + + + ++ N Sbjct: 1 MNKMVRIMLVMISVILLAGIITIIVIYKSNEATKAKGPNIDEVVDSSVDIDTMTTNLKDN 60 Query: 59 GVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 ++Q + + N+ + + L + D + LS M D K + Sbjct: 61 HIVQ----IAIKIEGNNKKAKDELTKRDFQIKDIMIDELSNMNMQDLQAEKGK--QKFKT 114 Query: 116 KIKEDLNSRLGSQFISEVLIDELN 139 IK LN + + V I Sbjct: 115 DIKNRLNKMMQDGEVVNVYITSFV 138 >gi|261249999|ref|ZP_05942576.1| flagellar biosynthesis protein FliL [Vibrio orientalis CIP 102891] gi|260939503|gb|EEX95488.1| flagellar biosynthesis protein FliL [Vibrio orientalis CIP 102891] Length = 135 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/114 (15%), Positives = 37/114 (32%), Gaps = 10/114 (8%) Query: 35 VPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDS---QERSYLKEIATDYL 90 + E ++ + G Y V++ +V + + + D + Sbjct: 23 AEEESTPKLAYFTLEPDLTTNFYTKGKKLGYIQVRIDIMVASEADLKIIELHQPLIRDAV 82 Query: 91 YTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEVLIDELNY 140 LL + ++LRK + LN L G I+++L + Y Sbjct: 83 IELLGKQSEDTITSLAGR--EDLRKTLVSQLNETLLPETGKTIIADLLFTKYLY 134 >gi|170694408|ref|ZP_02885562.1| flagellar basal body-associated protein FliL [Burkholderia graminis C4D1M] gi|170140831|gb|EDT09005.1| flagellar basal body-associated protein FliL [Burkholderia graminis C4D1M] Length = 165 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 12/99 (12%), Positives = 32/99 (32%), Gaps = 9/99 (9%) Query: 48 SELVSIPSVSNGVLQAYFLVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQ 104 E +++ S+ Q + + L+ + D + E + + LS + Sbjct: 67 LESMTVNLQSDDGQQHFLRIGLTLKLTDPKTTPELTEHMPEIRSRILLALSNHHPDELAP 126 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQF----ISEVLIDELN 139 ++ L +++ + + +VL E Sbjct: 127 LEGK--HALATELRTLIEQPTDKGAAPIHVQDVLFTEFV 163 >gi|300113609|ref|YP_003760184.1| flagellar basal body-associated protein Flil [Nitrosococcus watsonii C-113] gi|299539546|gb|ADJ27863.1| flagellar basal body-associated protein FliL [Nitrosococcus watsonii C-113] Length = 171 Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/135 (11%), Positives = 39/135 (28%), Gaps = 13/135 (9%) Query: 16 LISFYMLFLRSM--DTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA--YFLVKLSF 71 + Y+ + T + ++ + + V + + + + K+ Sbjct: 37 AGALYLTGVIGPQVATNEVSAAAKVSSQPAIYHSLDPVFVVNFQHQSQHRIRFLQTKMEA 96 Query: 72 IVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL--- 125 + D + L LLS ++ + LR+ +E++N L Sbjct: 97 MARDQEVIDALKTHMPAIRNTLLLLLSQQDYETVRTLEGK--ERLREAAREEINLILEAQ 154 Query: 126 -GSQFISEVLIDELN 139 G + V Sbjct: 155 AGVSGVEAVFFTGFV 169 >gi|254491872|ref|ZP_05105051.1| flagellar basal body-associated protein FliL [Methylophaga thiooxidans DMS010] gi|224463350|gb|EEF79620.1| flagellar basal body-associated protein FliL [Methylophaga thiooxydans DMS010] Length = 136 Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 42/130 (32%), Gaps = 8/130 (6%) Query: 16 LISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ-AYFLVKLSFIVN 74 L S +++F + + + E +I ++ + Y +K++ + + Sbjct: 5 LTSIFLIFSLIGASPLMAAESAAETSSIYYSIEEPFTINFLNQSQEKARYLQIKVALMSH 64 Query: 75 DSQERSYLK---EIATDYLYTLLSG---PPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQ 128 + + + D L TL + + + L K I+ L GS Sbjct: 65 EPTVLDSAQHNLPMIQDALRTLFTEQGYDTVSTVAGREQLQQQALTK-IRTLLQQETGSD 123 Query: 129 FISEVLIDEL 138 + ++ Sbjct: 124 GLEQIYFTSF 133 >gi|254446660|ref|ZP_05060136.1| flagellar basal body-associated protein FliL [Verrucomicrobiae bacterium DG1235] gi|198260968|gb|EDY85276.1| flagellar basal body-associated protein FliL [Verrucomicrobiae bacterium DG1235] Length = 175 Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 15/153 (9%), Positives = 46/153 (30%), Gaps = 16/153 (10%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPL-----------AIKNTNIIKSE 49 M+ L + + V++ F + + + + H T Sbjct: 23 MIPALLVIVLMPVISFAMFKFMIIPMIKAELPEHGEEAQITAEDLEITYDESGTEYSVVF 82 Query: 50 LVSIPSVSNGVLQAYFLVKLSF---IVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIK 106 + +V + + + K+ D+ ++L + D + + Sbjct: 83 EPVVANVKGTSQTRFIQAIFTVYGTHPDFESLVEGKKDRLRDHADSILGNLTLADLERRE 142 Query: 107 AFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 +R +++E N ++G + ++ + Sbjct: 143 MKNI--VRNQLREGFNHKIGKPIVEDISFSQFV 173 >gi|119476311|ref|ZP_01616662.1| flagellar protein [marine gamma proteobacterium HTCC2143] gi|119450175|gb|EAW31410.1| flagellar protein [marine gamma proteobacterium HTCC2143] Length = 176 Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats. Identities = 16/146 (10%), Positives = 44/146 (30%), Gaps = 10/146 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHV-----PPLAIKNTNIIKSELVSIPSVSN 58 L + + I+ + Y+L +D ++ + + + + Sbjct: 29 VLATLLAIAASIGGTLYLLGFFDVDEVLSDEDQTVEVDNTRPRPAMYFPIKPAFTVNFPT 88 Query: 59 GVLQAYFLVKLSFIVNDSQE---RSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR- 114 Q Y V ++ + D + + + L L G + + + Sbjct: 89 RGRQRYLQVDVAVLTRDPEVFNALQTHLPLVKNRLIMLFGGEVYDELQTDEGKELLRQKA 148 Query: 115 -KKIKEDLNSRLGSQFISEVLIDELN 139 + ++E + +G + E+L Sbjct: 149 LEVLQEIIKQEVGVNGVEEILFTNFV 174 >gi|323490131|ref|ZP_08095351.1| hypothetical protein GPDM_12292 [Planococcus donghaensis MPA1U2] gi|323396179|gb|EGA89005.1| hypothetical protein GPDM_12292 [Planococcus donghaensis MPA1U2] Length = 141 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 12/138 (8%), Positives = 43/138 (31%), Gaps = 5/138 (3%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 +K + + + ++ + + L+ + E H A + + + ++++ Sbjct: 5 IKIIVAFVVVAAIGAGA--YLYFMPKEEKAEEHKSLSAEEIAEMSIDTDIITTNLASAGN 62 Query: 62 QAYFLVKLSF-IVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 + + +E + + ++ + I G + +++ Sbjct: 63 FGVVQFNILLSDKDTKEEAEKRTAEVRAAVISTVASFTKEEL--IGESGISMIEEELVTR 120 Query: 121 LNSRLGSQFISEVLIDEL 138 L + VL+ E Sbjct: 121 LAEVFEKGTVERVLVTEF 138 >gi|124265764|ref|YP_001019768.1| flagellar basal body-associated protein [Methylibium petroleiphilum PM1] gi|124258539|gb|ABM93533.1| flagellar basal body-associated protein [Methylibium petroleiphilum PM1] Length = 210 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 16/144 (11%), Positives = 44/144 (30%), Gaps = 21/144 (14%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTM---------------VENHVPPLAIKNTNIIKS 48 + I +V ++L + N + Sbjct: 24 VMILAIVALLVAAGGGAAVYLLKKKAAEAAAAAEEGDDAEEVAHDAGKKDHKAPPNFLPL 83 Query: 49 ELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQI 105 E + ++++ + + + ++ V+D + L + + +LS G+ + Sbjct: 84 EPFVV-NLADRDQERFAQIGVTLQVDDPKVAEELKLYMPAIRNGVLMILSHKTSGEL--L 140 Query: 106 KAFGFDNLRKKIKEDLNSRLGSQF 129 + G + L +I + LG + Sbjct: 141 ERAGKEKLAAEIMRESVRPLGIEI 164 >gi|310659032|ref|YP_003936753.1| flagellar basal body-associated protein flil [Clostridium sticklandii DSM 519] gi|308825810|emb|CBH21848.1| putative Flagellar basal body-associated protein FliL precursor [Clostridium sticklandii] Length = 141 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 23/137 (16%), Positives = 47/137 (34%), Gaps = 12/137 (8%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAY 64 + + +V + Y++F R+ P I S G Y Sbjct: 11 IAVFVVSVLVFATTLYLVFFRAPAPS---DSSPKKIDTYKY-DLGDFSTNI---GSSGRY 63 Query: 65 FLVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDL 121 F K+ + + E DY+ ++L + + G +N++K I + + Sbjct: 64 FKGKIVIETTNKKTPKLIEQNVEPIRDYILSVLISQDVKT--MMSESGIENIKKDITKKV 121 Query: 122 NSRLGSQFISEVLIDEL 138 + +G+ IS V + Sbjct: 122 SEIIGTNDISNVYFTDY 138 >gi|254255073|ref|ZP_04948390.1| hypothetical protein BDAG_04399 [Burkholderia dolosa AUO158] gi|124899718|gb|EAY71561.1| hypothetical protein BDAG_04399 [Burkholderia dolosa AUO158] Length = 148 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 14/140 (10%), Positives = 44/140 (31%), Gaps = 10/140 (7%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K++ G+ + + +L + + + + + ++G + Sbjct: 6 KWIAIGVAVLALGGAGAAVLLTGGQFGGTAAPKAAADVDTARYVSLDKLVVMLKADGAAR 65 Query: 63 -AYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 Y + L F + ++ + Y LS D ++++ ++ Sbjct: 66 PRYMSIDLVFTAATEKSEKRVREQLPLLRALSYQALSEYSAADVLRMRPTDMS---DRLN 122 Query: 119 EDLNSRLGSQFIS---EVLI 135 + G++ +VL+ Sbjct: 123 GAFAAAFGTEEARPFTDVLV 142 >gi|229918637|ref|YP_002887283.1| flagellar basal body-associated protein FliL [Exiguobacterium sp. AT1b] gi|229470066|gb|ACQ71838.1| flagellar basal body-associated protein FliL [Exiguobacterium sp. AT1b] Length = 150 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 39/125 (31%), Gaps = 7/125 (5%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN 74 + +M + V P+ + ++ +N + + V+ + + + Sbjct: 25 MGGAGFMTYKYVFGDNVTAKTKPVTAEELAERSF--MTDDMTTNIQDERFINVQFTIVTD 82 Query: 75 DSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFIS 131 ++ + L+ + + LSG + ++E LN L + Sbjct: 83 SAETKENLELRKFQVHNVILGDLSGMTKAQLA--TKEDMQKFEQTLREQLNGLLEEGEVQ 140 Query: 132 EVLID 136 V + Sbjct: 141 RVYMT 145 >gi|297584046|ref|YP_003699826.1| flagellar basal body-associated protein FliL [Bacillus selenitireducens MLS10] gi|297142503|gb|ADH99260.1| flagellar basal body-associated protein FliL [Bacillus selenitireducens MLS10] Length = 143 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 54/133 (40%), Gaps = 6/133 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + + G+ + V + Y F ++ D E + + + +E ++ +SN V+ Sbjct: 10 MLIILVGMTLIGVLALVLYTQFFQAADPDAEPTIDEVIELSIE---TEEITTNLLSNHVI 66 Query: 62 QAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDL 121 +A F+++ ++ + + LS DF + G NL ++I+ ++ Sbjct: 67 RAQFVIQTDNRHARNEL-EKRNFQVENIIIRELSDMREADFQ--GSEGIRNLEEQIRYEI 123 Query: 122 NSRLGSQFISEVL 134 N + + +V Sbjct: 124 NQIMQDGHVVQVY 136 >gi|319787094|ref|YP_004146569.1| flagellar basal body-associated protein FliL [Pseudoxanthomonas suwonensis 11-1] gi|317465606|gb|ADV27338.1| flagellar basal body-associated protein FliL [Pseudoxanthomonas suwonensis 11-1] Length = 172 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/147 (11%), Positives = 41/147 (27%), Gaps = 13/147 (8%) Query: 5 LFSGIWISVVTLISFYMLFLRS-----MDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59 L + +V + + S + P + E + +++ G Sbjct: 25 LVITLVAVLVACGAGGGWYWSSRRAVAAEQAAAEAAKPKLPAQAQYLALEPPFVVNLNGG 84 Query: 60 -VLQAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQI---KAFGFDN 112 Y V++ + D+ E L LL+ +A + Sbjct: 85 LDGPQYLQVEIQLMTRDNADLAELQRHAPAIRARLLMLLAQQTADGIANRAGKEALQAEA 144 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELN 139 L ++++ + + G +L Sbjct: 145 L-AEVRKLMRTETGKPCAEALLFTSFV 170 >gi|253998474|ref|YP_003050537.1| flagellar basal body-associated protein FliL [Methylovorus sp. SIP3-4] gi|313200549|ref|YP_004039207.1| flagellar basal body-associated protein flil [Methylovorus sp. MP688] gi|253985153|gb|ACT50010.1| flagellar basal body-associated protein FliL [Methylovorus sp. SIP3-4] gi|312439865|gb|ADQ83971.1| flagellar basal body-associated protein FliL [Methylovorus sp. MP688] Length = 169 Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/127 (13%), Positives = 37/127 (29%), Gaps = 10/127 (7%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER 79 + L + + A K + E ++ ++ + V L+ V D+++ Sbjct: 44 FFLHKPAKEEHKVEEKHEEAPKPPVFVSLETFTV-NLQPDPESQFLQVDLTLKVADAEQA 102 Query: 80 S---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQ----FISE 132 + L LLS + I+ L +I + + +S Sbjct: 103 EIVKLHMPEIRNRLLMLLSSKKPSEVTSIEGK--KALSDEIVAQVKQPFSAGEKPLEVSG 160 Query: 133 VLIDELN 139 V Sbjct: 161 VFFTSFV 167 >gi|239907328|ref|YP_002954069.1| putative flagellar FliL protein [Desulfovibrio magneticus RS-1] gi|239797194|dbj|BAH76183.1| putative flagellar FliL protein [Desulfovibrio magneticus RS-1] Length = 151 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/96 (15%), Positives = 33/96 (34%), Gaps = 4/96 (4%) Query: 46 IKSELVSIPSVSNGVLQAYFLVKLSFI-VNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ 104 I +++ +S + +++ V+D K A + L +LS D + Sbjct: 58 ITIGPMTVNILSK-KGYRFMRLEMIVECVDDPSAERLYKADAREDLVLMLSNKLAEDLLT 116 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNY 140 LRK++ + G + + E + Sbjct: 117 NSGKMI--LRKELMDLFTKYAGPGKVKNIYFGEFVF 150 >gi|306820126|ref|ZP_07453774.1| flagellar basal body-associated protein FliL [Eubacterium yurii subsp. margaretiae ATCC 43715] gi|304551904|gb|EFM39847.1| flagellar basal body-associated protein FliL [Eubacterium yurii subsp. margaretiae ATCC 43715] Length = 146 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 20/135 (14%), Positives = 50/135 (37%), Gaps = 6/135 (4%) Query: 6 FSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL-QAY 64 +S++ ++ +L + +N + T I ++ G + + Sbjct: 11 IVIFVLSLLVFVATLVLVVFKPTGNPQNAPKKEKKEATQNIDVGDITTQIGQAGRFYKGF 70 Query: 65 FLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSR 124 ++++ ++ + D + T +S + + G L+ KIK D+N+ Sbjct: 71 VVLEVKGKKTPETIKAKM-PQIKDSIITSISAMTANEMTSPE--GMSKLKDKIKNDVNAI 127 Query: 125 LGSQF--ISEVLIDE 137 + S+ + VL E Sbjct: 128 IESETQDVVSVLFTE 142 >gi|77361235|ref|YP_340810.1| flagellar basal body-associated protein FliL-like protein [Pseudoalteromonas haloplanktis TAC125] gi|76876146|emb|CAI87368.1| putative orphan protein [Pseudoalteromonas haloplanktis TAC125] Length = 132 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 53/146 (36%), Gaps = 19/146 (13%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M K +F+G+++ + +L+S + + ++++ ++ Sbjct: 1 MKKTVFAGLFVLIASLVSL--------------TARADSTVGYFGFEPDIITNYIGASSK 46 Query: 61 LQAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR--K 115 Y + + ++N++ + + D L +LS P + ++ Sbjct: 47 KMGYVRITIDLMLNNASDIATVEHHTPLLRDALVEILSKEPEDKIKSLSGREEIRVKSAA 106 Query: 116 KIKEDLNSRLGSQFISEVLIDELNYL 141 K+K L G + I EVL + Y Sbjct: 107 KLKSLLKEETGQEIIREVLFTKYLYH 132 >gi|238788327|ref|ZP_04632121.1| hypothetical protein yfred0001_7750 [Yersinia frederiksenii ATCC 33641] gi|238723573|gb|EEQ15219.1| hypothetical protein yfred0001_7750 [Yersinia frederiksenii ATCC 33641] Length = 178 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 42/145 (28%), Gaps = 16/145 (11%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS-NGV 60 + + + T Y M + A + + E ++ ++ + Sbjct: 39 ILLVLIAV---AATAGGGY---SWWMLNKSKPTTTKAAPVSPVFMPLETFTVNLITPDNN 92 Query: 61 LQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 L + L+ + D R+ L L LLS + L +I Sbjct: 93 LDRVLYIGLTLRLPDDTTRAKLNDYLPEVRSRLLLLLSRQSADSLSNEEGK--QRLVGEI 150 Query: 118 KEDLN--SRLGSQ--FISEVLIDEL 138 K L+ G +S+VL Sbjct: 151 KNVLSPPMVKGQPNQVVSDVLFTAF 175 >gi|163789637|ref|ZP_02184075.1| hypothetical protein CAT7_09345 [Carnobacterium sp. AT7] gi|159875169|gb|EDP69235.1| hypothetical protein CAT7_09345 [Carnobacterium sp. AT7] Length = 155 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/130 (11%), Positives = 40/130 (30%), Gaps = 6/130 (4%) Query: 14 VTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSV-SNGVLQAYFLVKLSFI 72 V F T + + + + E I + + ++LS Sbjct: 26 VVGAVVSFGFTSGKATEIIKGFSEKEVVE-STVPLEEFLINLDSGESAKKNFLKIELSLY 84 Query: 73 VNDSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF 129 L D + ++L + + + ++K++ E +N +L + Sbjct: 85 STKEDADVLLNANVAEIRDTIISVLRKKSVNNVFVEEEGKLI-IKKELIEAINKKLDTDA 143 Query: 130 ISEVLIDELN 139 + ++ I + Sbjct: 144 VEDIFITNIV 153 >gi|239826623|ref|YP_002949247.1| flagellar basal body-associated protein FliL [Geobacillus sp. WCH70] gi|239806916|gb|ACS23981.1| flagellar basal body-associated protein FliL [Geobacillus sp. WCH70] Length = 141 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 38/115 (33%), Gaps = 6/115 (5%) Query: 28 DTMVENHVPPLAIKNTNIIKSELVSIPSVSNG-VLQAYFLVKLSFIVNDSQERSYLKEI- 85 M + + + I + + IP ++ Y V N + + + Sbjct: 26 AVMKLTEEKDHSAPSADEIVACSIDIPEITTNLADGRYVKVSFKIQANSEEGKEEAAKRD 85 Query: 86 --ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + + LS +F G +L +++K+ +N + + +V I Sbjct: 86 FQIKNIIIEELSEMKAENFK--GKKGMTDLEERLKQQINQIMQEGTVEQVYITSF 138 >gi|149908745|ref|ZP_01897406.1| LafF [Moritella sp. PE36] gi|149808287|gb|EDM68226.1| LafF [Moritella sp. PE36] Length = 149 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 20/146 (13%), Positives = 44/146 (30%), Gaps = 11/146 (7%) Query: 3 KFLFSGIWISVVT--LISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 K L G+ I L Y + +++ + I + + + S Sbjct: 4 KILIIGLVIIAAMGFLGFKYQVQIKAQIEALMQTPDVSKSTRPFYIPLDKMVVSVESERT 63 Query: 61 LQAYFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + Y +++++ Y + + LS + + L+ ++ Sbjct: 64 IY-YVMMEVTLETKLEASIEGINYYMPVIRNSFVQNLSQRSYDTIRK-NLKNIEQLQIEM 121 Query: 118 KEDLNSRLGS----QFISEVLIDELN 139 L+ L I VLI +L Sbjct: 122 LSGLDEELMRYEMNGIIDGVLITKLV 147 >gi|303249195|ref|ZP_07335433.1| flagellar basal body-associated protein FliL [Desulfovibrio fructosovorans JJ] gi|302489418|gb|EFL49367.1| flagellar basal body-associated protein FliL [Desulfovibrio fructosovorans JJ] Length = 145 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 24/151 (15%), Positives = 41/151 (27%), Gaps = 18/151 (11%) Query: 1 MLKFLFSGIWISVVTLI--SFYMLFLRS----MDTMVENHVPPLAIKNTNIIKSELVSIP 54 M K + G+ + L+ S ML S I +++ Sbjct: 1 MNKLMKVGLLVLAFLLVPPSPSMLMASSEGGHGGDATGGEKKEAGKAENGAIVIGPMTVN 60 Query: 55 SVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDY-----LYTLLSGPPMGDFVQIKAFG 109 +SN + + L D+ TD L LS D + Sbjct: 61 VLSNTG-YRFLHLTLDVQCEDNASAE----RLTDADCKQDLIFFLSSKLAEDLMTSAGK- 114 Query: 110 FDNLRKKIKEDLNSRLGSQFISEVLIDELNY 140 LR+ + + G + V E + Sbjct: 115 -MALRRDLILLFSKYTGPGKVKNVYFTEFVF 144 >gi|300696949|ref|YP_003747610.1| flagellar basal body-associated protein FliL [Ralstonia solanacearum CFBP2957] gi|299073673|emb|CBJ53193.1| Flagellar basal body-associated protein FliL [Ralstonia solanacearum CFBP2957] Length = 165 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 37/132 (28%), Gaps = 9/132 (6%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN 74 + FL P K + E +++ Y + ++F Sbjct: 34 MGGAAAWFFLGGGSHAAAGPAAPPKPKEPYFVPMETLTVNLQPEEGNDRYLQIAITFKSY 93 Query: 75 DSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN---SRLGSQ 128 D +K + LLS + + L K++ E +G + Sbjct: 94 DKHAEEAIKSYTPELRSRVLMLLSSKAPTELYSNEGKA--KLAKEVVEQCEQAYKAVGKE 151 Query: 129 F-ISEVLIDELN 139 I++VL Sbjct: 152 SPIADVLFTNFV 163 >gi|149912837|ref|ZP_01901371.1| hypothetical protein RAZWK3B_02575 [Roseobacter sp. AzwK-3b] gi|149813243|gb|EDM73069.1| hypothetical protein RAZWK3B_02575 [Roseobacter sp. AzwK-3b] Length = 168 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 24/172 (13%), Positives = 42/172 (24%), Gaps = 30/172 (17%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDT--------------------MVENHVPPLAI 40 M+K + + + D E Sbjct: 1 MIKLILPVALTVIGVAGGVGGGYAMRPDPSETVEINPCGDTEAQTGFAGASEKEDGAAEQ 60 Query: 41 KNTNIIKS-ELVSIPSVSNGVLQAYFLVKLSFIVNDSQ--ERSYLKEIATDYLYTLLSGP 97 +K +P V + A ++ LS V Q + D +L Sbjct: 61 AAAEYVKLNNQFVVPVVKAERIDALVVLALSIEVTAGQSGLVYESEPKLRDAFLQVLFDH 120 Query: 98 PM---GDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDM 146 + D LR + E S LG+ +LI + + D+ Sbjct: 121 ANMGGFAGAFTNSGNMDVLRMSLTEVAQSILGADA-KGILITD---IGRQDI 168 >gi|149908615|ref|ZP_01897277.1| flagellar basal body-associated protein [Moritella sp. PE36] gi|149808449|gb|EDM68386.1| flagellar basal body-associated protein [Moritella sp. PE36] Length = 132 Score = 45.0 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 18/126 (14%), Positives = 39/126 (30%), Gaps = 10/126 (7%) Query: 19 FYMLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSFIVNDSQ 77 + L ++ E + S + V + F++ D+ Sbjct: 4 LFWLLSMVTASLSTAVSANDHQPVYIYFGLEPDIITNYTSETNKIGFISVSVEFMLADND 63 Query: 78 ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFI 130 + + D + +LL + + +RK+I+ ++NS L G I Sbjct: 64 GLDIIEMHEPLIRDKIISLLGQQSPQHLRSLTGR--EEIRKEIQNEVNSLLKQETGKAVI 121 Query: 131 SEVLID 136 +L Sbjct: 122 ENLLFT 127 >gi|83747639|ref|ZP_00944675.1| FliL [Ralstonia solanacearum UW551] gi|207728362|ref|YP_002256756.1| flagellar flil protein [Ralstonia solanacearum MolK2] gi|83725691|gb|EAP72833.1| FliL [Ralstonia solanacearum UW551] gi|206591608|emb|CAQ57220.1| flagellar flil protein [Ralstonia solanacearum MolK2] Length = 165 Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 19/132 (14%), Positives = 37/132 (28%), Gaps = 9/132 (6%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN 74 + FL P K + E +++ Y + ++F Sbjct: 34 MGGAAAWFFLGGGSHAAAGPAAPPKPKEPYFVPMETLTVNLQPEEGNDRYLQIAITFKSY 93 Query: 75 DSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN---SRLGSQ 128 D +K + LLS + + L K++ E +G + Sbjct: 94 DKHAEEAIKAYTPELRSRVLMLLSSKAPAELYSNEGKA--KLAKEVVEQCEQAYKAVGKE 151 Query: 129 F-ISEVLIDELN 139 I++VL Sbjct: 152 SPIADVLFTNFV 163 >gi|116329293|ref|YP_799013.1| endoflagellar basal body-associated protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116330100|ref|YP_799818.1| endoflagellar basal body-associated protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] gi|116122037|gb|ABJ80080.1| Endoflagellar basal body-associated protein [Leptospira borgpetersenii serovar Hardjo-bovis L550] gi|116123789|gb|ABJ75060.1| Endoflagellar basal body-associated protein [Leptospira borgpetersenii serovar Hardjo-bovis JB197] Length = 174 Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 28/122 (22%), Positives = 43/122 (35%), Gaps = 10/122 (8%) Query: 22 LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQ---- 77 + V PP + N N +E I + S+ + +KL+F + Sbjct: 55 TSTFTQMKNVALVKPPPPLANYNF--TEEFRI-NTSDKGEAHFVKMKLAFGIAKEDQTLS 111 Query: 78 -ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLID 136 E + D L L+ G D I +LR++IK +N L I EV Sbjct: 112 AELAERNAQMRD-LINLIVGRKSKD-ELINIEDQLDLREEIKAQVNHILTEGKIQEVYFT 169 Query: 137 EL 138 E Sbjct: 170 EF 171 >gi|90406813|ref|ZP_01215005.1| flagellar basal body-associated protein [Psychromonas sp. CNPT3] gi|90312050|gb|EAS40143.1| flagellar basal body-associated protein [Psychromonas sp. CNPT3] Length = 173 Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/133 (12%), Positives = 34/133 (25%), Gaps = 15/133 (11%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTN------IIKSELVSIPSVSNGVLQAYFLVKLSFIV 73 Y +++ + + + + +V G +K+ +V Sbjct: 41 YFFLFSDNESVETEAITEEVSTEIDETLQAIYVAMPRPFVFNVMEGKRDRLVQIKVQLMV 100 Query: 74 ---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----G 126 + + L + +G + + LRK E LN Sbjct: 101 RGDENQTLAKKHIPLLEGTLVRIFGAATVGQLRSPEGK--EELRKFALEALNKETMKVED 158 Query: 127 SQFISEVLIDELN 139 I+ VL Sbjct: 159 KGLINAVLFTGFV 171 >gi|51894130|ref|YP_076821.1| flagellar synthesis protein [Symbiobacterium thermophilum IAM 14863] gi|51857819|dbj|BAD41977.1| flagellar synthesis protein [Symbiobacterium thermophilum IAM 14863] Length = 154 Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 14/146 (9%), Positives = 40/146 (27%), Gaps = 17/146 (11%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPL----------AIKNTNIIKSELVSIP 54 L + + I V + + + + + + + Sbjct: 9 LVAAVVILAVGVAGLAAYVIFILPQSGGLVAAGGGGGTAVVAGEPVLEAAYYELDEF-VT 67 Query: 55 SVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFD 111 ++++ Y ++ + N Q D + + + D + Sbjct: 68 NLADKDRLRYIKFSVALGLRSDNSEQIARDAAPQVRDVVLSQVRELTAADLSGADGK--E 125 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDE 137 L + IK L+ L ++ V + + Sbjct: 126 RLAQAIKNGLDGLLPGH-VTRVYVTD 150 >gi|205373387|ref|ZP_03226191.1| flagellar basal body-associated protein FliL [Bacillus coahuilensis m4-4] Length = 144 Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 17/128 (13%), Positives = 37/128 (28%), Gaps = 10/128 (7%) Query: 17 ISFYMLFLRS-MDTMVENHVPPLAIKNTNI-IKSELVSIPSVSNGVLQAYFLVKLSFIVN 74 + + L D P + + ++ +SN + + + Sbjct: 20 GAVTFVVLWKLSDNGEAAESEPSIDEILEYSVDIPELTTNLLSN---NDFIRISFKIQTD 76 Query: 75 DSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFIS 131 + + L++ D + +S + N+ IK LNS + I Sbjct: 77 SKKAKEELEKRNFQVNDIIIEEMSELTSDEIRGKDGK--RNIEDTIKTKLNSLMQEGKIE 134 Query: 132 EVLIDELN 139 +V I Sbjct: 135 KVYITSWV 142 >gi|296531763|ref|ZP_06894585.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] gi|296267902|gb|EFH13707.1| conserved hypothetical protein [Roseomonas cervicalis ATCC 49957] Length = 140 Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 14/127 (11%), Positives = 38/127 (29%), Gaps = 3/127 (2%) Query: 12 SVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSF 71 + L + ML + K + ++ ++ +Y +V ++ Sbjct: 10 LLGALAALVMLPSLAAPLAPALAAEAAPRKEFEFLTLGDFTVNLPASNRRMSYVVVSVTL 69 Query: 72 IVNDSQER--SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF 129 Q + L + L ++ LR + + L +++ Sbjct: 70 ETRSEQTQSFRDLSPRLKQAVLRRLMAMSERQELRQGQVDPAQLRDSLFDSL-AQVQEDG 128 Query: 130 ISEVLID 136 + +V+I Sbjct: 129 LKDVVIT 135 >gi|86157792|ref|YP_464577.1| flagellar basal body-associated protein FliL [Anaeromyxobacter dehalogenans 2CP-C] gi|85774303|gb|ABC81140.1| flagellar basal body-associated protein FliL [Anaeromyxobacter dehalogenans 2CP-C] Length = 167 Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 16/107 (14%), Positives = 28/107 (26%), Gaps = 6/107 (5%) Query: 36 PPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYT 92 IK + + + Y V V +D + L D Sbjct: 62 AGAGAPPGPTIKLADFIV-HLRDTDADRYARVTFDVEVATEDDRTRLAPLVPRVRDAFIA 120 Query: 93 LLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 LS + + A + + E L + I + I +L Sbjct: 121 YLSDRTVEELRGGDA--IARTKAALSERLGALAAGVEIRALYITDLV 165 >gi|24216274|ref|NP_713755.1| flagellar basal body-associated protein FliL [Leptospira interrogans serovar Lai str. 56601] gi|45656522|ref|YP_000608.1| flagellar protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] gi|24197540|gb|AAN50773.1| flagellar basal body-associated protein FliL [Leptospira interrogans serovar Lai str. 56601] gi|45599757|gb|AAS69245.1| flagellar protein [Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130] Length = 174 Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 28/120 (23%), Positives = 43/120 (35%), Gaps = 10/120 (8%) Query: 24 LRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQ-----E 78 + V PP + N N +E I + S+ + +KL+F + E Sbjct: 57 TFTQMKNVALVKPPPPLANYNF--TEEFRI-NTSDKGEAHFVKMKLAFGIAKEDQTLSAE 113 Query: 79 RSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + D L L+ G D I +LR++IK +N L I EV E Sbjct: 114 LAERNAQMRD-LINLIVGRKSKD-ELINIEDQLDLREEIKAQVNHILTEGKIQEVYFTEF 171 >gi|294664065|ref|ZP_06729467.1| flagellar basal body-associated protein FliL [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] gi|292606168|gb|EFF49417.1| flagellar basal body-associated protein FliL [Xanthomonas fuscans subsp. aurantifolii str. ICPB 10535] Length = 201 Score = 44.7 bits (104), Expect = 0.006, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 41/129 (31%), Gaps = 9/129 (6%) Query: 20 YMLFLRSMDTMVENHVPPLAIK---NTNIIKSELVSIPSVSN-GVLQAYFLVKLSFIVND 75 + + H P + + + ++++ G Y V++ + D Sbjct: 71 WFFLGHKGEEKGGKHDAPKVAEVPKPAQYFPMDPAIVVNLADPGDGPQYLQVEVQLVTRD 130 Query: 76 SQERSYLK---EIATDYLYTLLSGPPMGDFVQI--KAFGFDNLRKKIKEDLNSRLGSQFI 130 +E + +L LLS D + K + + ++ + S G + + Sbjct: 131 PEELKLITENAPAIRAHLLMLLSQVKATDVADLAGKQKLQKSALAEAQKVMTSETGKKCV 190 Query: 131 SEVLIDELN 139 E+L Sbjct: 191 EELLFTSFV 199 >gi|293607829|ref|ZP_06690149.1| flagellar FliL protein [Achromobacter piechaudii ATCC 43553] gi|292813772|gb|EFF72933.1| flagellar FliL protein [Achromobacter piechaudii ATCC 43553] Length = 208 Score = 44.3 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 19/118 (16%), Positives = 38/118 (32%), Gaps = 10/118 (8%) Query: 29 TMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQ---ERSYLKEI 85 T V P+A+ + E ++ + N + V L+ V+D Q Sbjct: 92 TFVAPPAGPIAVPAPIFVPIEAFTVT-LQNADTERIMHVGLTLRVSDEQTRTRLEKYMPE 150 Query: 86 ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLG----SQFISEVLIDELN 139 + +LS + ++ IK +N Q++++VL Sbjct: 151 VRSRILMVLSSQSPTGVQTQQGK--TDMANAIKVAVNRPFSPLPDGQYVTDVLFTAFV 206 >gi|58039166|ref|YP_191130.1| flagellar FliL protein [Gluconobacter oxydans 621H] gi|58001580|gb|AAW60474.1| Flagellar FliL protein [Gluconobacter oxydans 621H] Length = 157 Score = 44.3 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 14/138 (10%), Positives = 34/138 (24%), Gaps = 6/138 (4%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K + + ++ + I + S Sbjct: 19 KIIILAVLACLLLAGGGAFAWKHFHHAATPVAKTAPQPVKWTTITIPTILSNLDSGTDRT 78 Query: 63 AYFLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 Y + V D ++ + L D T L G + + LR+ + Sbjct: 79 RYVRIGARLEVEDGKDAANIAALMPQIQDAFQTCLHGMQPSELSGSGIY---RLRETMLA 135 Query: 120 DLNSRLGSQFISEVLIDE 137 + + + + ++ E Sbjct: 136 QITNIVAPLRVRDLFFVE 153 >gi|91785618|ref|YP_560824.1| flagellar basal body-associated protein FliL [Burkholderia xenovorans LB400] gi|91689572|gb|ABE32772.1| Flagellar basal body-associated protein FliL [Burkholderia xenovorans LB400] Length = 168 Score = 44.3 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 13/130 (10%), Positives = 36/130 (27%), Gaps = 11/130 (8%) Query: 19 FYMLFL--RSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDS 76 + P + E +++ S+ Q + + L+ +ND+ Sbjct: 39 VWFFMSKRAPAAGSAATAGAPAPLPAPLFFPLESMTVNLQSDDGQQHFLRIGLTLKLNDA 98 Query: 77 QERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF---- 129 + + + LS + ++ L +++ + Sbjct: 99 KTQQELSEHMPEVRSRILLALSNKHPEELAPLEGK--RALATELQTLIEQPTDKGAAPIH 156 Query: 130 ISEVLIDELN 139 + +VL E Sbjct: 157 VQDVLFTEFV 166 >gi|288553054|ref|YP_003424989.1| flagellar basal body-associated protein FliL [Bacillus pseudofirmus OF4] gi|288544214|gb|ADC48097.1| flagellar basal body-associated protein FliL [Bacillus pseudofirmus OF4] Length = 143 Score = 44.3 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 40/118 (33%), Gaps = 3/118 (2%) Query: 22 LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY 81 LF + N P + +E ++ +SN ++ F + + + + Sbjct: 27 LFNHFTNQPEANAEPTIDEIIAQSYVTEEITTNLLSNDFVRTQFHIHVDSKKALQEIQKR 86 Query: 82 LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + + LSG D + G + L +IKE +N L + +V Sbjct: 87 -DFQVENIILRTLSGKKSPDLA--GSAGIEELEAEIKEQINQLLQEGSVVQVYTTSWV 141 >gi|119468534|ref|ZP_01611625.1| hypothetical protein ATW7_10823 [Alteromonadales bacterium TW-7] gi|119448042|gb|EAW29307.1| hypothetical protein ATW7_10823 [Alteromonadales bacterium TW-7] Length = 132 Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 50/146 (34%), Gaps = 19/146 (13%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M K ++ G+ +++L+S + + ++++ ++ Sbjct: 1 MKKIVYVGLLTLIMSLVSL-------------SARAESTVGYFGFEP-DIITNYIGASSK 46 Query: 61 LQAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR--K 115 Y V + +++++ + + D + + S P + + + Sbjct: 47 KMGYVRVTVDLMLSNNSDIAIVEHHTPLLRDAIVEIFSKEPEEKIKSLTGREEIRAKCIE 106 Query: 116 KIKEDLNSRLGSQFISEVLIDELNYL 141 K+K L G + I EVL + Y Sbjct: 107 KLKSLLKEETGQEIIREVLFTKYLYH 132 >gi|301166583|emb|CBW26159.1| putative flagellar transmembrane protein [Bacteriovorax marinus SJ] Length = 156 Score = 43.9 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 41/146 (28%), Gaps = 12/146 (8%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENH-------VPPLAIKNTNIIKSELVSIPSV 56 L + V + F + + K + + I Sbjct: 11 ILILSFLATAVCVGVFVFTEMIYQKPLPSEQVELQRLMSDNKKKAFPAPFKLDSLIINLN 70 Query: 57 SNGVLQAYFLVKLS---FIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113 S + V+ F + + + + D + + + I L Sbjct: 71 SRKTRLRFLSVETQLVPFNHDSDDKFESYRSMINDSIIDIAGRMTAEELNSISGKIL--L 128 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELN 139 ++IK+ +N +G QF+ VL + Sbjct: 129 EERIKKSVNKLMGKQFVKGVLFTKFV 154 >gi|220903604|ref|YP_002478916.1| flagellar basal body-associated protein FliL [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] gi|219867903|gb|ACL48238.1| flagellar basal body-associated protein FliL [Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774] Length = 221 Score = 43.9 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 19/109 (17%), Positives = 36/109 (33%), Gaps = 7/109 (6%) Query: 34 HVPPLAIKNTNIIK-SELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDY 89 P+ + + +K +P +G + + K S I + D Sbjct: 113 PSQPVDVPPADYVKELAPFVVPRQVDGT-ARFLVCKFSTISKSPSVSGEMDHKMISLRDA 171 Query: 90 LYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 L+ LSG + +++ + LN L S I +VL + Sbjct: 172 LFFYLSGKSDDYLLNPG--NAVTIKRDLTSILNDYLSSGRIDDVLFESY 218 >gi|311030120|ref|ZP_07708210.1| flagellar basal body-associated protein FliL [Bacillus sp. m3-13] Length = 143 Score = 43.9 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 22/133 (16%), Positives = 46/133 (34%), Gaps = 19/133 (14%) Query: 10 WISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNI-IKSELVSIPSVSNGVLQAYFLVK 68 I++VT+ FY E+ P + I + ++ S G Y +K Sbjct: 22 VIALVTVDKFY---------ADESTEEPTIDEIIKYSIDFDEMTTNLQSGG----YVRLK 68 Query: 69 LSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL 125 + + + L + + + ++ DF K G L ++I++ +N + Sbjct: 69 MKVQTDSKKATEELLKRDFQVQNIVIHQIASKTASDFEGGK--GLTQLEEEIQQKINEVM 126 Query: 126 GSQFISEVLIDEL 138 I +V Sbjct: 127 QDGEIVKVYTTSF 139 >gi|328543158|ref|YP_004303267.1| flagellar basal body-associated protein FliL [polymorphum gilvum SL003B-26A1] gi|326412904|gb|ADZ69967.1| Flagellar basal body-associated protein FliL [Polymorphum gilvum SL003B-26A1] Length = 167 Score = 43.9 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 14/131 (10%), Positives = 36/131 (27%), Gaps = 21/131 (16%) Query: 20 YMLFLRSMDTMVENHVPPLAIK---NTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDS 76 Y S + + +++ + G Y V+++ V D Sbjct: 43 YFFLFSSSEPPPMVGEDGAIREAQKPVVFYDLPEMTVNLSTEGRTT-YLKVRIALEVQDK 101 Query: 77 QERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFD------NLRKKIKEDLNSRLGS 127 + D L +++ + L++++ +N + Sbjct: 102 EMIERIKPFLPRIMDAFQIYLR--------ELRPADLEGSAGLFRLKEELLRRINLSVHP 153 Query: 128 QFISEVLIDEL 138 + VL E+ Sbjct: 154 ARVDGVLFKEI 164 >gi|295399819|ref|ZP_06809800.1| flagellar basal body-associated protein FliL [Geobacillus thermoglucosidasius C56-YS93] gi|312111669|ref|YP_003989985.1| flagellar basal body-associated protein FliL [Geobacillus sp. Y4.1MC1] gi|294978222|gb|EFG53819.1| flagellar basal body-associated protein FliL [Geobacillus thermoglucosidasius C56-YS93] gi|311216770|gb|ADP75374.1| flagellar basal body-associated protein FliL [Geobacillus sp. Y4.1MC1] Length = 142 Score = 43.9 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 15/125 (12%), Positives = 38/125 (30%), Gaps = 8/125 (6%) Query: 18 SFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQ 77 L T + P A + ++++G Y + N + Sbjct: 21 GAIALIAVLKLTGEKEQSTPSADEIVESSIDIPEITTNLADG---RYVKISFKIQTNSKK 77 Query: 78 ERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVL 134 + ++ + + LS +F G + +++K+ +N + + +V Sbjct: 78 GKEEAEKRDFQIKNIIIEELSEMKAENFK--GKEGMTSFEERLKQQINQIMQDGKVEQVY 135 Query: 135 IDELN 139 I Sbjct: 136 ITSFV 140 >gi|323698083|ref|ZP_08109995.1| flagellar basal body-associated protein FliL [Desulfovibrio sp. ND132] gi|323458015|gb|EGB13880.1| flagellar basal body-associated protein FliL [Desulfovibrio desulfuricans ND132] Length = 232 Score = 43.9 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 15/112 (13%), Positives = 33/112 (29%), Gaps = 5/112 (4%) Query: 30 MVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---A 86 + P I+K + I V + V + D K+ Sbjct: 120 AIPQPEPEAPETPQIIVKLDPFLIEQVDEAGKIRFLEVSILLSTEDEGLARQFKQETYAV 179 Query: 87 TDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + LY L + + L+K++ +N +G ++ ++ Sbjct: 180 RNALYYYLKNKDLEFLS--DKENSEKLKKELLVIINQYMGFGQFDTLMFEQY 229 >gi|323527698|ref|YP_004229851.1| flagellar basal body-associated protein FliL [Burkholderia sp. CCGE1001] gi|323384700|gb|ADX56791.1| flagellar basal body-associated protein FliL [Burkholderia sp. CCGE1001] Length = 164 Score = 43.9 bits (102), Expect = 0.010, Method: Composition-based stats. Identities = 14/125 (11%), Positives = 34/125 (27%), Gaps = 9/125 (7%) Query: 22 LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLS--FIVND-SQE 78 F S P + + +++ S+ Q + + L+ QE Sbjct: 40 WFFMSKRAPAPTAAAPAPVPAPTFFPLDSMTVNLQSDDGQQHFLRIGLTLKLTDPKTPQE 99 Query: 79 RSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF----ISEVL 134 + + LS + ++ L +++ + + +VL Sbjct: 100 LTEHMPEIRSRILLALSNHHPDELAPLEGK--HALATELRTLIEQPTDKGAAPIHVQDVL 157 Query: 135 IDELN 139 E Sbjct: 158 FTEFV 162 >gi|329850581|ref|ZP_08265426.1| hypothetical protein ABI_34890 [Asticcacaulis biprosthecum C19] gi|328840896|gb|EGF90467.1| hypothetical protein ABI_34890 [Asticcacaulis biprosthecum C19] Length = 139 Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/129 (11%), Positives = 38/129 (29%), Gaps = 14/129 (10%) Query: 12 SVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYF----LV 67 ++ L + + P ++ V IP + + + Y + Sbjct: 10 VLIALPAGLFASTAHASGGSKTAAEPS-------VRLASVGIPVIRDRQVVNYLFLSIRI 62 Query: 68 KLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGS 127 LS + + R L+ + D + + G + + + + G+ Sbjct: 63 NLSMTAPEGKLRE-LEPMFRDTVIRVSHKISFGQADRHDKLDEPRFKSVMMGEFTKIAGA 121 Query: 128 QFIS--EVL 134 I ++L Sbjct: 122 GNIKSIDIL 130 >gi|23009501|ref|ZP_00050525.1| COG1580: Flagellar basal body-associated protein [Magnetospirillum magnetotacticum MS-1] Length = 171 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 13/126 (10%), Positives = 31/126 (24%), Gaps = 10/126 (7%) Query: 20 YMLFLRSMDTMVENH---VPPLAIKNTNIIKSELVSIPSVSNGVLQA--YFLVKLSFIVN 74 + + + + + +++S + Sbjct: 44 FFFMKNKAAHADAGEHGAEKAEPKAQAVFLDMRDMLVNLSPDPGTPKANILKLRVSLELK 103 Query: 75 DSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFIS 131 D++ L D T L D + G LR+++ +N + Sbjct: 104 DAKAEAAVKPLMPRVEDTFQTYLRELRASDLA--GSAGMYRLREELLRRVNIAIHPAKAE 161 Query: 132 EVLIDE 137 VL + Sbjct: 162 AVLFKD 167 >gi|222530128|ref|YP_002574010.1| flagellar basal body-associated protein FliL [Caldicellulosiruptor bescii DSM 6725] gi|312621579|ref|YP_004023192.1| flagellar basal body-associated protein flil [Caldicellulosiruptor kronotskyensis 2002] gi|222456975|gb|ACM61237.1| flagellar basal body-associated protein FliL [Caldicellulosiruptor bescii DSM 6725] gi|312202046|gb|ADQ45373.1| flagellar basal body-associated protein FliL [Caldicellulosiruptor kronotskyensis 2002] Length = 156 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/98 (16%), Positives = 36/98 (36%), Gaps = 8/98 (8%) Query: 46 IKSELVSIPSVSNGVLQ--AYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMG 100 + + ++ + V + V D + +KE D + ++L Sbjct: 59 VNDGKALMSNLQDTQTNAGRIIRVTVQLEVTDKKLPETMKEKNIVIADIIDSVLRSKTAD 118 Query: 101 DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + ++ + + +RK+IK+ LN G + V E Sbjct: 119 ELLKPEGK--EKVRKEIKDRLNEIFG-NKVYNVNFGEF 153 >gi|142921|gb|AAA22445.1| ORF-A, 3' end [Bacillus subtilis] Length = 84 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 13/78 (16%), Positives = 31/78 (39%), Gaps = 5/78 (6%) Query: 65 FLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDL 121 + + + + + L++ D + +LL+ K + +K++K+ + Sbjct: 7 IRLAIKLETDSDKSKEELEKRDFQVKDAVISLLADTNADQIEGDKGK--ETFKKELKDKI 64 Query: 122 NSRLGSQFISEVLIDELN 139 NS L + +V I N Sbjct: 65 NSYLQEGKVEKVYITSFN 82 >gi|297538200|ref|YP_003673969.1| flagellar basal body-associated protein FliL [Methylotenera sp. 301] gi|297257547|gb|ADI29392.1| flagellar basal body-associated protein FliL [Methylotenera sp. 301] Length = 165 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 14/127 (11%), Positives = 34/127 (26%), Gaps = 10/127 (7%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER 79 + L + D E + E ++ ++ + + ++S V ++ Sbjct: 40 WFLTHQKSDHKKEEAKHEEPAHAPVFVTLEAFTV-NLQPDPDEKFLQTEISLQVASPEQE 98 Query: 80 SYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF----ISE 132 L L LL+ D + L +I ++ ++ Sbjct: 99 ELLKSQMPAVRSRLLMLLTSKTASDISTSEGK--QKLSDEIVAEVKKPFSKGAKPQEVTG 156 Query: 133 VLIDELN 139 V Sbjct: 157 VFFTSFV 163 >gi|254523656|ref|ZP_05135711.1| flagellar basal body-associated protein FliL [Stenotrophomonas sp. SKA14] gi|219721247|gb|EED39772.1| flagellar basal body-associated protein FliL [Stenotrophomonas sp. SKA14] Length = 171 Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 12/129 (9%), Positives = 28/129 (21%), Gaps = 11/129 (8%) Query: 20 YMLFLRSMDTMVENHVPPLA-IKNTNIIKSELVSIPSVSNG-VLQAYFLVKLSFIVNDSQ 77 + + A + + +++ Y +++ + D Sbjct: 43 WFFTQSKHEEKAAQAPKKSATPAPAQYFALDPAFVVNLNGPVDGPRYLQLEVQLMTRDPA 102 Query: 78 ERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFI 130 L L S I L+ ++ L GS Sbjct: 103 ALEAIKTHAPAIRARLLMLFSQVSPDQIADIAGK--QKLQAASLAEVQKVLKAETGSNGA 160 Query: 131 SEVLIDELN 139 ++L Sbjct: 161 DDLLFTSFV 169 >gi|83647850|ref|YP_436285.1| flagellar basal body-associated protein [Hahella chejuensis KCTC 2396] gi|83635893|gb|ABC31860.1| Flagellar basal body-associated protein [Hahella chejuensis KCTC 2396] Length = 174 Score = 43.5 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 15/153 (9%), Positives = 41/153 (26%), Gaps = 18/153 (11%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN---------IIKSELVSI 53 K + + ++ + + + + + + ++ A + Sbjct: 22 KMIIIVSLVLLIAVGASVGVTMMLLKSSPDDGSDTSAEGGEQAAPVKAEAIYYDMRPPLV 81 Query: 54 PSVSNGVLQAYFLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGF 110 + Q + +S + + + + L L SG + + Sbjct: 82 VTFDYKGKQRFLQASISLLTRNQGVLDGVDLHMPVIRNRLINLYSGKDFENVQTDEGRL- 140 Query: 111 DNLRKKIKEDLNSRLGS----QFISEVLIDELN 139 L + E +N+ L I +VL Sbjct: 141 -ALLSESLEAINTALKEQGVDGEIEQVLFTNFV 172 >gi|326319065|ref|YP_004236737.1| flagellar basal body-associated protein FliL [Acidovorax avenae subsp. avenae ATCC 19860] gi|323375901|gb|ADX48170.1| flagellar basal body-associated protein FliL [Acidovorax avenae subsp. avenae ATCC 19860] Length = 195 Score = 43.5 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 14/138 (10%), Positives = 41/138 (29%), Gaps = 18/138 (13%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIK------------NTNIIKSELV 51 L I +V FL S + + + E + Sbjct: 19 VLIIAIVAVLVLAGGGAAWFLLSKRSHADEDEEGGGGHAKAAQAEHKEKVAPTFLPIENM 78 Query: 52 SIPSVSNGVLQAYFLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAF 108 + ++++ + + + ++ + D++ + L+S + + Sbjct: 79 VV-NLADTGGERFAQIGITLELADAKTSDQVKQYLPSIRSAILMLVSQRTSQELLSRDGK 137 Query: 109 GFDNLRKKIKEDLNSRLG 126 + L I+ +++ LG Sbjct: 138 --EKLAVDIRREVSKPLG 153 >gi|302872560|ref|YP_003841196.1| flagellar basal body-associated protein FliL [Caldicellulosiruptor obsidiansis OB47] gi|302575419|gb|ADL43210.1| flagellar basal body-associated protein FliL [Caldicellulosiruptor obsidiansis OB47] Length = 156 Score = 43.5 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 18/119 (15%), Positives = 39/119 (32%), Gaps = 9/119 (7%) Query: 26 SMDTMVENHVPPLAIKNTNI-IKSELVSIPSVSNGVLQ--AYFLVKLSFIVNDSQERSYL 82 + T V K + + ++ + + + V D + L Sbjct: 38 ASPTAKTTPVEKKPEKLYTYDVNDGKALMSNLQDTQTNAGRIIRLTVQLEVTDKKLSETL 97 Query: 83 KEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 KE D + ++L + ++ + + +RK+IK+ LN + V E Sbjct: 98 KEKNIVIADIIDSVLRSKTADELLKPEGK--EKVRKEIKDRLNEVF-ENKVYNVNFGEF 153 >gi|332534494|ref|ZP_08410331.1| flagellar biosynthesis protein FliL [Pseudoalteromonas haloplanktis ANT/505] gi|332036062|gb|EGI72539.1| flagellar biosynthesis protein FliL [Pseudoalteromonas haloplanktis ANT/505] Length = 132 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 19/146 (13%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M K +++G++ V++ISF + ++++ ++ Sbjct: 1 MKKIVYAGLFTFFVSVISF-------------TARAESTVGYFGFEP-DIITNYIGASSK 46 Query: 61 LQAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR--K 115 Y V + ++ D+ + + D L +LS P + + + Sbjct: 47 KMGYVRVTIDLMLTDTSDIAVVEHHTPLLRDALVEILSKEPEEKIKSLTGREEIRAKCAE 106 Query: 116 KIKEDLNSRLGSQFISEVLIDELNYL 141 K+K L G + I EVL + Y Sbjct: 107 KLKSLLKEETGQEIIREVLFTKYLYH 132 >gi|311693110|gb|ADP95983.1| flagellar basal body-associated protein FliL [marine bacterium HP15] Length = 149 Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 20/105 (19%), Positives = 34/105 (32%), Gaps = 9/105 (8%) Query: 43 TNIIKSELVSIP-SVSNGVLQAYFLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPP 98 T+ I + + + G Y +S N + R L L Sbjct: 43 TDYISMDPPFVTHVGTPGNKPTYLKAAVSLRANSASARPAVDAHMPRLRHELVMLFGEQT 102 Query: 99 MGDFVQIKAFGFDNLRKKIKEDLNSRLGS----QFISEVLIDELN 139 D G + LR++ K+ +N+ L + I+ VL E Sbjct: 103 DTD-RLTSMEGQEALREEAKQRINAVLEEQQTGESIAGVLFTEFV 146 >gi|88801107|ref|ZP_01116653.1| flagellar protein [Reinekea sp. MED297] gi|88776136|gb|EAR07365.1| flagellar protein [Reinekea sp. MED297] Length = 141 Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 11/110 (10%), Positives = 29/110 (26%), Gaps = 5/110 (4%) Query: 35 VPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER---SYLKEIATDYLY 91 A + + E + + + Y ++ V D + + + Sbjct: 29 SATPAAVGPSYVDLEPAFTLNYGDPMRTRYLQASITLRVRDQAAALEVTAHSDAIRHIII 88 Query: 92 TLLSGPPMGDFVQIKAFG--FDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 L + P + +++++ + G I VL Sbjct: 89 MLFARQPEEKIRTAAGRDDILEQALRELQDLMLKETGKTLIDRVLFTSFV 138 >gi|24216273|ref|NP_713754.1| flagellar basal body-associated protein FliL [Leptospira interrogans serovar Lai str. 56601] gi|24197539|gb|AAN50772.1| flagellar basal body-associated protein FliL [Leptospira interrogans serovar Lai str. 56601] Length = 172 Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats. Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 10/108 (9%) Query: 36 PPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQ-----ERSYLKEIATDYL 90 PP+ ++N N +E I ++ G + +KL+F + E + E D L Sbjct: 67 PPIPLENYNF--TEEFRIDTLDKGETH-FVKMKLAFGIAKEDQTLSAELAERNEQMRD-L 122 Query: 91 YTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 L+ G D I + R++IK +N L I EV E Sbjct: 123 IKLIVGRKFKD-ELINIEDQLDFREEIKAQVNHILTEGKIQEVYFTEF 169 >gi|288958673|ref|YP_003449014.1| flagellar basal body-associated protein [Azospirillum sp. B510] gi|288910981|dbj|BAI72470.1| flagellar basal body-associated protein [Azospirillum sp. B510] Length = 185 Score = 43.1 bits (100), Expect = 0.016, Method: Composition-based stats. Identities = 16/145 (11%), Positives = 38/145 (26%), Gaps = 24/145 (16%) Query: 15 TLISFYMLFLR----SMDTMVENHVPPLAIKN---------------TNIIKSELVSIPS 55 Y L + E A + + + Sbjct: 39 AGAGVYFSGLLDGLLGKEKPAEEGEQAAAKEGDHGAEAGKGDAAHAAPIFYDLPDMLVNL 98 Query: 56 VSNGVLQAYFLVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDN 112 + A+ +K+S ++ + ++ D L + D + G Sbjct: 99 NTGNKRPAFLKIKISIQLSKPEDVGAVEHVLPRIIDNFQVYLRELRLEDLR--GSAGMYR 156 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDE 137 LR+++ + + + +VL E Sbjct: 157 LRQELLLRITAAAYPVKVKDVLFKE 181 >gi|150019070|ref|YP_001311324.1| flagellar basal body-associated protein FliL [Clostridium beijerinckii NCIMB 8052] gi|149905535|gb|ABR36368.1| flagellar basal body-associated protein FliL [Clostridium beijerinckii NCIMB 8052] Length = 161 Score = 43.1 bits (100), Expect = 0.016, Method: Composition-based stats. Identities = 12/125 (9%), Positives = 40/125 (32%), Gaps = 13/125 (10%) Query: 14 VTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV 73 Y+ F + V + ++ ++ + + +F +L+ Sbjct: 37 AAFGGMYLFFKTQKTVDAQEVVVEN-----EYMDLAEFTV-NLGDEGGKRFFKGELALGY 90 Query: 74 N--DSQERSYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQ 128 + ++ + L + D + + + ++K++ + +N L Sbjct: 91 DKTKAKLKEELTANQVVVRDDIIFYFKSQKADYLNNVA--NREAIKKQLIDSINKDLTKG 148 Query: 129 FISEV 133 I++V Sbjct: 149 KITDV 153 >gi|319649556|ref|ZP_08003712.1| flagellar basal body-associated protein FliL [Bacillus sp. 2_A_57_CT2] gi|317398718|gb|EFV79400.1| flagellar basal body-associated protein FliL [Bacillus sp. 2_A_57_CT2] Length = 144 Score = 43.1 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 18/132 (13%), Positives = 46/132 (34%), Gaps = 11/132 (8%) Query: 9 IWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVK 68 + I++V I+ ++ S + + ++ + ++ S+ Y + Sbjct: 17 VAITLVGAIALVIVMKFSGEDETKEPTIDDVLE--ASVDIPQITANLASDD----YIRIS 70 Query: 69 LSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL 125 + + + L++ + + LS D G L++ +K +N + Sbjct: 71 FKIQTENKKAKEELQKRDFQVKNLIIQELSEMKAEDIQ--GKEGQIKLQEDLKTKINGLM 128 Query: 126 GSQFISEVLIDE 137 I +V I E Sbjct: 129 QEGKIVQVYITE 140 >gi|77359747|ref|YP_339322.1| flagellar basal body-associated protein FliL [Pseudoalteromonas haloplanktis TAC125] gi|76874658|emb|CAI85879.1| putative flagellar protein [Pseudoalteromonas haloplanktis TAC125] Length = 176 Score = 43.1 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 39/141 (27%), Gaps = 22/141 (15%) Query: 19 FYMLFLRSMDTMVENHVPPLAIKNTN-------------IIKSELVSIPSVSNGVLQAYF 65 Y L S + + + + + ++ Sbjct: 36 GYFLLSGSDTPAETLNDEAATAQQASSSTGSSAKIGSALYVAMPRPFVFNIPGSSRDRIV 95 Query: 66 LVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN 122 +K+ +V + + + L ++ S + + G +NLR E + Sbjct: 96 QIKVELLVRSEANEETAKKHIPLIESTLLSIFSMTTADELS--TSVGKENLRFAALEKVQ 153 Query: 123 SRL----GSQFISEVLIDELN 139 + L GS+ I VL Sbjct: 154 ASLMDVEGSKVIERVLFTGFV 174 >gi|190574233|ref|YP_001972078.1| putative flagellar basal body-associated protein FliL [Stenotrophomonas maltophilia K279a] gi|190012155|emb|CAQ45778.1| putative flagellar basal body-associated protein FliL [Stenotrophomonas maltophilia K279a] Length = 171 Score = 43.1 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 11/127 (8%), Positives = 29/127 (22%), Gaps = 7/127 (5%) Query: 20 YMLFLRS-MDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG-VLQAYFLVKLSFIVNDSQ 77 + D + + + +++ Y +++ + D Sbjct: 43 WFFTQSKHEDKAAQAPKKTTTPAPAQYFALDPAFVVNLNGPVDGPRYLQLEVQLMTRDPA 102 Query: 78 ERSY---LKEIATDYLYTLLSGPPMGDFVQ--IKAFGFDNLRKKIKEDLNSRLGSQFISE 132 L L S K ++++ L + GS + Sbjct: 103 ALEAIKTHAPAIRARLLMLFSQVSPDQIADVAGKQKLQAASLAEVQKVLKAETGSNGADD 162 Query: 133 VLIDELN 139 +L Sbjct: 163 LLFTSFV 169 >gi|296274400|ref|YP_003657031.1| flagellar basal body-associated protein FliL [Arcobacter nitrofigilis DSM 7299] gi|296098574|gb|ADG94524.1| flagellar basal body-associated protein FliL [Arcobacter nitrofigilis DSM 7299] Length = 176 Score = 43.1 bits (100), Expect = 0.017, Method: Composition-based stats. Identities = 18/143 (12%), Positives = 41/143 (28%), Gaps = 22/143 (15%) Query: 17 ISFYMLFLRS-MDTMVENHVPPLAIKNTNIIK------SELVSIPSVSNGVLQAYFLVKL 69 Y L+ + + E + L K N K + + + + + Sbjct: 34 GGGYFLYSQGVFNPQEEKAMQELGKKEVNNSKEMYKAAINDLVLNITNAKGREKLMKLSF 93 Query: 70 SFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLG 126 + ND K D + + +S + + + L+ ++ +++N L Sbjct: 94 TIKSNDPAIESIVESYKAEIVDVVISQISARSSEELLTVGGKAL--LKDELVDEINKVLN 151 Query: 127 S----------QFISEVLIDELN 139 + EVL Sbjct: 152 EATATNSDIQKNSVKEVLFTTFV 174 >gi|325474947|gb|EGC78133.1| flagellar protein FliL-like protein [Treponema denticola F0402] Length = 156 Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 22/145 (15%), Positives = 47/145 (32%), Gaps = 9/145 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN--IIKSELVSIPSVSNG 59 LK++ I + ++ + S + LF + V P I+ + IP+ Sbjct: 15 LKYVLFAIVLIII-VGSVFSLFKKKNTGEVLKPESPSEIRGKKALYSDLGRLRIPTADAN 73 Query: 60 VLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 L + D L + L S + + + + ++K+ Sbjct: 74 SGTLVVFPVLEYNSEDKAFEEELVQKKEDIRKSLIDWFSQKTVYELYTMPE---NEVKKE 130 Query: 117 IKEDLNSRLGSQFISEVLIDELNYL 141 + ++NS L I + + L Sbjct: 131 VLAEINSILNLSRIKRIYFKDFVIL 155 >gi|89098633|ref|ZP_01171515.1| flagellar basal body-associated protein FliL [Bacillus sp. NRRL B-14911] gi|89086595|gb|EAR65714.1| flagellar basal body-associated protein FliL [Bacillus sp. NRRL B-14911] Length = 142 Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 14/113 (12%), Positives = 37/113 (32%), Gaps = 10/113 (8%) Query: 29 TMVENHVPPLAIKNTN-IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI-- 85 T P + + ++ S+ + + + + + L++ Sbjct: 32 TDGAEEKEPSIEEVLEASVDINQITTNLASDD----FIRISFKVETDSKKAKEELEKRDF 87 Query: 86 -ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 + + LS D + +L++ +K +NS + + + V I E Sbjct: 88 QVKNIIIQELSEKKAEDLQGKEGK--ISLQEDLKSKINSLMQNGKVESVYITE 138 >gi|183598648|ref|ZP_02960141.1| hypothetical protein PROSTU_02054 [Providencia stuartii ATCC 25827] gi|188020833|gb|EDU58873.1| hypothetical protein PROSTU_02054 [Providencia stuartii ATCC 25827] Length = 160 Score = 42.7 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 13/146 (8%), Positives = 40/146 (27%), Gaps = 16/146 (10%) Query: 6 FSGIWISVVTLISFYMLFLRSM----DTMVENHVPPLAIKNTNIIKSELVSIPSVS-NGV 60 ++ + + + + V + + E ++ N Sbjct: 15 LLVLFALLAIAGAGFGGYTWWTTQQTANSVNEEEKSPKLSQPIFMDLEPFTVNLPGLNES 74 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 + ++ + + + R L + + LL + KA + + ++ + Sbjct: 75 PDRVLYINITLRLANEKSRKQLHDFLPEVRSRLLLLLSE---QKPKALSTHDGKLQLMQA 131 Query: 121 LNSRLGSQF--------ISEVLIDEL 138 + L I++VL Sbjct: 132 IKKTLSPTVIPGENDQEITDVLFTTF 157 >gi|303248679|ref|ZP_07334933.1| flagellar basal body-associated protein FliL [Desulfovibrio fructosovorans JJ] gi|302489935|gb|EFL49861.1| flagellar basal body-associated protein FliL [Desulfovibrio fructosovorans JJ] Length = 131 Score = 42.7 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 6/113 (5%), Positives = 29/113 (25%), Gaps = 7/113 (6%) Query: 28 DTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL-KEIA 86 D + + ++ ++++G A + Sbjct: 23 DAPAQQRETFVRGGTAVYSDVDV----NITDGARLARLHLAFEAQCISEDAARLAASPET 78 Query: 87 TDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + + L + + + ++++ +N +G + + + Sbjct: 79 REAVLLFLRERTVAELSTPRGK--REFKRQLLAVMNKAVGGPRVVRIYFLQFV 129 >gi|296157438|ref|ZP_06840273.1| flagellar basal body-associated protein FliL [Burkholderia sp. Ch1-1] gi|295892210|gb|EFG71993.1| flagellar basal body-associated protein FliL [Burkholderia sp. Ch1-1] Length = 168 Score = 42.7 bits (99), Expect = 0.022, Method: Composition-based stats. Identities = 12/129 (9%), Positives = 36/129 (27%), Gaps = 11/129 (8%) Query: 20 YMLFLR--SMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQ 77 + + E P + E +++ S+ + + L+ + D++ Sbjct: 40 WFFMSKRAPAAGSAETASAPAPLAAPLFFPLESMTVNLQSDDGQPHFLRIGLTLKLTDAK 99 Query: 78 ERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF----I 130 + + LS + ++ L +++ + + Sbjct: 100 TQQELTEHMPEVRSRILLALSNKHPEELAPLEGK--RALATELQTLIEQPTDKGAAPIHV 157 Query: 131 SEVLIDELN 139 +VL E Sbjct: 158 QDVLFTEFV 166 >gi|312126830|ref|YP_003991704.1| flagellar basal body-associated protein flil [Caldicellulosiruptor hydrothermalis 108] gi|311776849|gb|ADQ06335.1| flagellar basal body-associated protein FliL [Caldicellulosiruptor hydrothermalis 108] Length = 156 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 18/122 (14%), Positives = 38/122 (31%), Gaps = 8/122 (6%) Query: 22 LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ--AYFLVKLSFIVNDSQER 79 L S T + + ++ + V + V D + Sbjct: 35 LSPTSSAAKTTPVEKKPEKLYTYDVNDGKALMSNLQDTQTNAGRIIRVTVQLEVTDKKLP 94 Query: 80 SYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLID 136 +KE D + ++L + ++ + + +RK+IK+ LN + V Sbjct: 95 ETMKEKNIVIADIIDSVLRSKTADELLKPEGK--EKVRKEIKDRLNEIF-ENKVYNVNFG 151 Query: 137 EL 138 E Sbjct: 152 EF 153 >gi|83944159|ref|ZP_00956615.1| flagellar L-ring protein precursor [Sulfitobacter sp. EE-36] gi|83955141|ref|ZP_00963797.1| hypothetical protein NAS141_03511 [Sulfitobacter sp. NAS-14.1] gi|83840470|gb|EAP79643.1| hypothetical protein NAS141_03511 [Sulfitobacter sp. NAS-14.1] gi|83845026|gb|EAP82907.1| flagellar L-ring protein precursor [Sulfitobacter sp. EE-36] Length = 151 Score = 42.3 bits (98), Expect = 0.022, Method: Composition-based stats. Identities = 10/130 (7%), Positives = 38/130 (29%), Gaps = 7/130 (5%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNI-IKSELVSIPSVSNG 59 M+K++ + V+ + + R M A + + ++ + + Sbjct: 1 MIKYIIIAV--CVIGAGAMGYVGERFMRPTTSAPSDQAATQELMFKMPLGKFTMQIIQSR 58 Query: 60 VLQAYFLVKLSFIVNDSQERSYL----KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 + +++ S + D + ++ D + + + Sbjct: 59 KILHLVFDMDVYVMGASSFHEINGAVGRARLRDATVSAIAELAETDLSLAQPIEEEARKA 118 Query: 116 KIKEDLNSRL 125 ++ + +L Sbjct: 119 ELAAQIVRKL 128 >gi|315127313|ref|YP_004069316.1| flagellar basal body-associated protein FliL [Pseudoalteromonas sp. SM9913] gi|315015827|gb|ADT69165.1| flagellar basal body-associated protein FliL [Pseudoalteromonas sp. SM9913] Length = 175 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 13/143 (9%), Positives = 34/143 (23%), Gaps = 18/143 (12%) Query: 15 TLISFYMLFLRSMDT-------------MVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 ++ Y L + + + + I +V Sbjct: 31 GAVAGYFLLSGGDEPVETLADDAANGEVAAAPTSSSATVGSALYVAMPRPFIFNVPGASR 90 Query: 62 QAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR--KK 116 +K+ +V + + + L ++ S + K Sbjct: 91 DRIVQIKVQLLVRGDGNEETAKKHIPLIEGTLLSVFSMTTADELSTSVGKETLRFTALDK 150 Query: 117 IKEDLNSRLGSQFISEVLIDELN 139 ++ + G++ I VL Sbjct: 151 VQAAMMDVEGNKVIERVLFTGFV 173 >gi|308273537|emb|CBX30139.1| unknown protein [uncultured Desulfobacterium sp.] Length = 250 Score = 42.3 bits (98), Expect = 0.024, Method: Composition-based stats. Identities = 26/139 (18%), Positives = 55/139 (39%), Gaps = 8/139 (5%) Query: 6 FSGIWISVVTLISF-YMLFLR---SMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 SGI I + L+S Y LR + +++ I+ ++ E +P Sbjct: 113 ISGIVILLCLLLSVVYFFILRQPEAGSPLIKATKITAKIEKQALV-FEPFIVPC-EGSKY 170 Query: 62 QAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAF-GFDNLRKKIKED 120 Y L+ +SF + ++ + E + + ++ + + +L+ IK Sbjct: 171 YTYMLIDISFDASGKNIQTEITEK-QNEIRKIIYDILLKKIEGADSIPAAVDLKNDIKSG 229 Query: 121 LNSRLGSQFISEVLIDELN 139 +N+ L + I EV I + + Sbjct: 230 INAVLENGKIHEVFITKYH 248 >gi|149376220|ref|ZP_01893984.1| Flagellar basal body-associated protein [Marinobacter algicola DG893] gi|149359417|gb|EDM47877.1| Flagellar basal body-associated protein [Marinobacter algicola DG893] Length = 150 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 16/105 (15%), Positives = 34/105 (32%), Gaps = 9/105 (8%) Query: 43 TNIIKSELVSIPSVSNGVLQ-AYFLVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGPP 98 T+ I+ + + V + + Y ++ + L +L G Sbjct: 44 TDYIEMDPPFVTHVGDPGTKLTYLKAAVTIRASKETTRPAVEAHMPRLRHELV-MLFGEQ 102 Query: 99 MGDFVQIKAFGFDNLRKKIKEDLNSRLGS----QFISEVLIDELN 139 G +LR++ + +N+ L + I+ VL E Sbjct: 103 TDTEQLSSTEGQQSLREEATKRINAALEEQQTGETITGVLFTEFV 147 >gi|312792658|ref|YP_004025581.1| flagellar basal body-associated protein flil [Caldicellulosiruptor kristjanssonii 177R1B] gi|312876508|ref|ZP_07736491.1| flagellar basal body-associated protein FliL [Caldicellulosiruptor lactoaceticus 6A] gi|311796719|gb|EFR13065.1| flagellar basal body-associated protein FliL [Caldicellulosiruptor lactoaceticus 6A] gi|312179798|gb|ADQ39968.1| flagellar basal body-associated protein FliL [Caldicellulosiruptor kristjanssonii 177R1B] Length = 159 Score = 42.3 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 39/122 (31%), Gaps = 9/122 (7%) Query: 23 FLRSMDTMVENHVPPLAIKNTNI-IKSELVSIPSVSNGVLQ--AYFLVKLSFIVNDSQER 79 + + + K + + ++ + V + V D + Sbjct: 38 TTSAAKAVKTINAEKKPEKLYTYDVNDGKALMSNLQDTQTNTGRIIRVTVQLEVTDKKLP 97 Query: 80 SYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLID 136 +KE D + ++L + ++ + + +RK+IK+ LN + V Sbjct: 98 ETMKEKNIVIADIIDSVLRSKTADELLKPEGK--EKVRKEIKDRLNEIF-ENKVYNVNFG 154 Query: 137 EL 138 E Sbjct: 155 EF 156 >gi|332139476|ref|YP_004425214.1| flagellar basal body-associated protein FliL-like protein [Alteromonas macleodii str. 'Deep ecotype'] gi|327549498|gb|AEA96216.1| flagellar basal body-associated protein FliL-like protein [Alteromonas macleodii str. 'Deep ecotype'] Length = 137 Score = 42.3 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 46/147 (31%), Gaps = 20/147 (13%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 MLK L ++ + LF ++ +N N + E + + + Sbjct: 1 MLKPLVLRVFAL------SFFLFGGNLAVAQDN-------ANYAYLGLEPEIVTNYISDS 47 Query: 61 LQ--AYFLVKLSFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFVQI-KAFGFD-NL 113 Q Y V + +++D + + + + P + + Sbjct: 48 AQKLGYVRVSVELMIHDVNELEIAEHHMPLLRSTAIEIFGQQPAEKVKSLTGREDIRRAI 107 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELNY 140 K ++E + G + I V+ + Y Sbjct: 108 LKALQEHMQQETGGEVIKNVIFTKYLY 134 >gi|197105128|ref|YP_002130505.1| hypothetical protein PHZ_c1665 [Phenylobacterium zucineum HLK1] gi|196478548|gb|ACG78076.1| conserved hypothetical protein [Phenylobacterium zucineum HLK1] Length = 139 Score = 42.3 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 16/100 (16%), Positives = 27/100 (27%), Gaps = 3/100 (3%) Query: 41 KNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGP 97 + + + +P V NG L Y V + + D + D L Sbjct: 28 EGGQYVDLLPLGLPIVVNGRLVNYVFVHVRINLAASADPLRARAKEPHLRDALVRAAHRT 87 Query: 98 PMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 P L + D + LG + V + Sbjct: 88 PFTVATDHNKIDTAKLAAALMRDAATILGRGQVRSVAVTS 127 >gi|238755313|ref|ZP_04616656.1| hypothetical protein yruck0001_10690 [Yersinia ruckeri ATCC 29473] gi|238706449|gb|EEP98823.1| hypothetical protein yruck0001_10690 [Yersinia ruckeri ATCC 29473] Length = 156 Score = 42.3 bits (98), Expect = 0.027, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 42/141 (29%), Gaps = 8/141 (5%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS-NGVLQ 62 ++ + I+V + + M + A + + ++ ++ + L Sbjct: 15 WVILLVLIAVASAAGG--GYSWWMLHNSKPINAKPAPVAPVFMALDTFTVNLITPDNNLD 72 Query: 63 AYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGF--DNLRKKI 117 + L+ + D R L L LLS + ++ + Sbjct: 73 RVLYIGLTLRLPDENTRRALNDYLPEVRSRLLLLLSRQTAESLTNEEGKQLLIKQIKTVL 132 Query: 118 KEDLNSRLGSQFISEVLIDEL 138 + +Q IS+VL Sbjct: 133 SPAMVKGQPNQVISDVLFTAF 153 >gi|312135843|ref|YP_004003181.1| flagellar basal body-associated protein flil [Caldicellulosiruptor owensensis OL] gi|311775894|gb|ADQ05381.1| flagellar basal body-associated protein FliL [Caldicellulosiruptor owensensis OL] Length = 156 Score = 42.3 bits (98), Expect = 0.028, Method: Composition-based stats. Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 6/79 (7%) Query: 63 AYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 V + V D + LKE D + ++L + ++ + + +RK+IK+ Sbjct: 78 RIIRVTVQLEVTDKKLSETLKEKNIVIADIIDSVLRSKTADELLKPEGK--EKVRKEIKD 135 Query: 120 DLNSRLGSQFISEVLIDEL 138 LN + V E Sbjct: 136 RLNEIF-DNKVYNVNFGEF 153 >gi|120553404|ref|YP_957755.1| flagellar basal body-associated protein FliL [Marinobacter aquaeolei VT8] gi|120323253|gb|ABM17568.1| flagellar basal body-associated protein FliL [Marinobacter aquaeolei VT8] Length = 151 Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 20/127 (15%), Positives = 34/127 (26%), Gaps = 11/127 (8%) Query: 22 LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ-AYFLVKLSFIVNDSQ--- 77 L E T+ I E + V + AY ++ + Sbjct: 24 LMPSLPTMAEEADEETEVKGVTDYIAMEPAFVTHVGKPDAKVAYLKASVTIRASRETTRP 83 Query: 78 ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFG-FDNLRKKIKEDLNSRLGS----QFISE 132 L L D Q+ + LR++ + +N L + I+ Sbjct: 84 AVEAHMPRLRHELVMLFGEQT--DLDQLSSMDGQQALREEATKRINGVLEEQQTGETITG 141 Query: 133 VLIDELN 139 VL E Sbjct: 142 VLFTEFV 148 >gi|114800308|ref|YP_758990.1| hypothetical protein HNE_0259 [Hyphomonas neptunium ATCC 15444] gi|114740482|gb|ABI78607.1| hypothetical protein HNE_0259 [Hyphomonas neptunium ATCC 15444] Length = 169 Score = 42.0 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 14/94 (14%), Positives = 33/94 (35%), Gaps = 5/94 (5%) Query: 50 LVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL--KEIATDYLYTLL---SGPPMGDFVQ 104 +P + N + + ++ ++ + + + + D + T L SG Sbjct: 71 EFVVPIIQNERVASLVILNINIESDAAMSDKLFSQEPVIRDVVMTTLIEISGDGKTFQSM 130 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 ++ LR I L + I +LI ++ Sbjct: 131 TSIENYETLRSLILGALQKKFPDMGIKNILILDI 164 >gi|319944168|ref|ZP_08018444.1| flagellar basal body-associated protein FliL [Lautropia mirabilis ATCC 51599] gi|319742463|gb|EFV94874.1| flagellar basal body-associated protein FliL [Lautropia mirabilis ATCC 51599] Length = 187 Score = 42.0 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 13/107 (12%), Positives = 30/107 (28%), Gaps = 6/107 (5%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVND---S 76 + D E + E ++ ++++ V + + + Sbjct: 37 WFFLKPPHDPDAEKLALYKPSPEPVFVTLEPFTV-NLADEGGDRMAQVAVVLQMQNAYAE 95 Query: 77 QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNS 123 E + + L LLS + K + L + IK+ Sbjct: 96 SELKKVMPVVRSKLLKLLSSQKSEQLLTEKGK--EALAEAIKQRTIE 140 >gi|237731992|ref|ZP_04562473.1| flagellar biosynthesis protein [Citrobacter sp. 30_2] gi|226907531|gb|EEH93449.1| flagellar biosynthesis protein [Citrobacter sp. 30_2] Length = 155 Score = 42.0 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 13/140 (9%), Positives = 32/140 (22%), Gaps = 6/140 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + L + T Y + P + ++ ++ + Sbjct: 16 IPLLVLITLAACATAGYSYWRMQQ--QPSASVKAEPPPPPAPVFFALDTFTV-NLGDADR 72 Query: 62 QAYFLVKLSFI-VNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFG--FDNLRKKIK 118 Y + L + L L S + +++ + Sbjct: 73 VLYIGITLRMKDEATRSRLNEYLPEVRSRLLLLFSRQNAATLATEEGKQQLITAIKETLA 132 Query: 119 EDLNSRLGSQFISEVLIDEL 138 L Q +++VL Sbjct: 133 TPLVVGQPKQVVTDVLYTAF 152 >gi|332533120|ref|ZP_08408989.1| flagellar biosynthesis protein FliL [Pseudoalteromonas haloplanktis ANT/505] gi|332037402|gb|EGI73856.1| flagellar biosynthesis protein FliL [Pseudoalteromonas haloplanktis ANT/505] Length = 176 Score = 42.0 bits (97), Expect = 0.035, Method: Composition-based stats. Identities = 19/146 (13%), Positives = 38/146 (26%), Gaps = 24/146 (16%) Query: 16 LISFYMLFLRSMDTMVENHVPPLA---------------IKNTNIIKSELVSIPSVSNGV 60 + F+ D VE A + + + + +V Sbjct: 31 GGAAGYFFMSGSDAPVETLDEETAMSTDAAPAASGSSAEVGSALYVAMPRPFVFNVPGSS 90 Query: 61 LQAYFLVKLSFIVN---DSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 +K+ +V + + + L ++ S + + LR Sbjct: 91 RDRIVQIKVQLLVRGEVNEETAKKHIPLIEGTLLSVFSTTTADELSTSSGK--ETLRFSA 148 Query: 118 KEDLNSRL----GSQFISEVLIDELN 139 E + L GS+ I VL Sbjct: 149 LEKVQKALMDVEGSKVIERVLFTGFV 174 >gi|163852466|ref|YP_001640509.1| flagellar basal body-associated protein FliL [Methylobacterium extorquens PA1] gi|218531222|ref|YP_002422038.1| flagellar basal body-associated protein FliL [Methylobacterium chloromethanicum CM4] gi|240139803|ref|YP_002964280.1| Flagellar fliL protein [Methylobacterium extorquens AM1] gi|254562218|ref|YP_003069313.1| flagellar fliL protein [Methylobacterium extorquens DM4] gi|163664071|gb|ABY31438.1| flagellar basal body-associated protein FliL [Methylobacterium extorquens PA1] gi|218523525|gb|ACK84110.1| flagellar basal body-associated protein FliL [Methylobacterium chloromethanicum CM4] gi|240009777|gb|ACS41003.1| Flagellar fliL protein [Methylobacterium extorquens AM1] gi|254269496|emb|CAX25462.1| Flagellar fliL protein [Methylobacterium extorquens DM4] Length = 172 Score = 42.0 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 17/145 (11%), Positives = 41/145 (28%), Gaps = 12/145 (8%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENH-----VPPLAIKNTNIIKSELVSIPSVS 57 K + + ++ F++S + H + + + Sbjct: 26 KLIIIAAAVLLLGGGGGGFFFMKSRAAHADAHGEHGAEKLDPKAQAVFLDMRDMLVNLSP 85 Query: 58 NGVLQA--YFLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDN 112 + ++++ + D++ L D T L D + G Sbjct: 86 DPGATKSNVLKLRVALELKDAKVEATVKPLMPRVEDAFQTYLREIRASDLA--GSAGLYR 143 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDE 137 LR+++ +N L VL + Sbjct: 144 LREELLRRVNIALHPAKAEAVLFKD 168 >gi|325109024|ref|YP_004270092.1| flagellar basal body-associated protein FliL [Planctomyces brasiliensis DSM 5305] gi|324969292|gb|ADY60070.1| flagellar basal body-associated protein FliL [Planctomyces brasiliensis DSM 5305] Length = 182 Score = 42.0 bits (97), Expect = 0.037, Method: Composition-based stats. Identities = 24/153 (15%), Positives = 57/153 (37%), Gaps = 19/153 (12%) Query: 2 LKFLFSGIWISVVTLI---SFYMLFLRSMDTMVENHVPP-------LAIKNTNIIKSELV 51 LKF + +V ++ + YM F +S + ++ + P T I S Sbjct: 28 LKFAAVAGLLVIVMVVQILTLYMFFGQSGEANLDPNDPAILDAESLDDTSTTEIDISPQF 87 Query: 52 SIPSVSNGVLQAYFLVKLSFIVNDS------QERSYLKEIATDYLYTLLSGPPMGDFVQI 105 + + + + + L V + + + K + T++ + + Sbjct: 88 NSTNSLSQQGEIHVSFNLHVEVPTNLAESFNEAKKNHKNKIRQSVITIIRNAGIEELNDP 147 Query: 106 KAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 ++++I+ED+N L F++ V+I + Sbjct: 148 ---YLSVIKRQIREDINKILNQSFVTGVIITDY 177 >gi|207739720|ref|YP_002258113.1| flagellar rotation flil (partial sequence) protein [Ralstonia solanacearum IPO1609] gi|206593102|emb|CAQ60008.1| putative flagellar rotation flil (partial sequence) protein [Ralstonia solanacearum IPO1609] Length = 115 Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 32/102 (31%), Gaps = 9/102 (8%) Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGD 101 + E +++ Y + ++F D +K + LLS + Sbjct: 14 FVPMETLTVNLQPEEGNDRYLQIAITFKSYDKHAEEAIKAYTPELRSRVLMLLSSKAPAE 73 Query: 102 FVQIKAFGFDNLRKKIKEDLN---SRLGSQF-ISEVLIDELN 139 + L K++ E +G + I++VL Sbjct: 74 LYSNEGKA--KLAKEVVEQCEQAYKAVGKESPIADVLFTNFV 113 >gi|134095083|ref|YP_001100158.1| flagellar basal body-associated protein FliL [Herminiimonas arsenicoxydans] gi|55977141|gb|AAV68362.1| FliL [Herminiimonas arsenicoxydans] gi|133738986|emb|CAL62034.1| Flagellar FliL protein [Herminiimonas arsenicoxydans] Length = 166 Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 14/136 (10%), Positives = 38/136 (27%), Gaps = 12/136 (8%) Query: 11 ISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLS 70 ++ ++Y L ++ + + E ++ ++ + + + + Sbjct: 34 MAAGGAGAWYFLGQKAAAQPAKAAHVEAK--PPVFLPMEAFTV-NLQSENGEQFLQTSFT 90 Query: 71 FIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGS 127 V D + LLS + + ++ L ++I Sbjct: 91 LQVLDQAQVDLIKLYMPHVRSRILLLLSSKKASEILSVEGK--TKLAEEIINIFKQPFTP 148 Query: 128 Q----FISEVLIDELN 139 Q +S VL Sbjct: 149 QGPTVKVSSVLFTSFV 164 >gi|170747254|ref|YP_001753514.1| flagellar basal body-associated protein FliL [Methylobacterium radiotolerans JCM 2831] gi|170653776|gb|ACB22831.1| cyclic nucleotide-binding protein [Methylobacterium radiotolerans JCM 2831] Length = 184 Score = 41.6 bits (96), Expect = 0.039, Method: Composition-based stats. Identities = 16/106 (15%), Positives = 33/106 (31%), Gaps = 7/106 (6%) Query: 37 PLAIKNTNIIKSELVSIPSVSN--GVLQAYFLVKLSFIVNDSQERS---YLKEIATDYLY 91 P K + + + + V++S + D++ L D L Sbjct: 77 PEGKKPVVFVDVREMLLNLSPELPQDKGRFAKVRISLELKDAKVEEEVRPLMPRVEDALQ 136 Query: 92 TLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDE 137 + D + G LR+++ +N L + VL + Sbjct: 137 VYMRELRASDI--TNSVGLFRLREELLRRVNIALYPAKVDAVLFKD 180 >gi|330501287|ref|YP_004378156.1| flagellar basal body-associated protein FliL-like protein [Pseudomonas mendocina NK-01] gi|328915573|gb|AEB56404.1| flagellar basal body-associated protein FliL-like protein [Pseudomonas mendocina NK-01] Length = 134 Score = 41.6 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 14/117 (11%), Positives = 38/117 (32%), Gaps = 8/117 (6%) Query: 29 TMVENHVPPLAIKNTNIIKSELVSIPSVSN-GVLQAYFLVKLSFIV---NDSQERSYLKE 84 + + T I ++++ G +F +S V ++ + Sbjct: 16 PALASSEKKEEAPTTLYYNLTPALIGNLADTGNRLKFFKADVSLRVTGTEAEEKIKQHEP 75 Query: 85 IATDYLYTLLSGPPMGDFVQI---KAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + + L S + + L+K +++ +N G + ++L + L Sbjct: 76 LIRHQMVMLFSAQTSETINAPDGRENLRLEALKK-VQDAINGEEGKPIVEDLLFNNL 131 >gi|257095344|ref|YP_003168985.1| flagellar basal body-associated protein FliL [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] gi|257047868|gb|ACV37056.1| flagellar basal body-associated protein FliL [Candidatus Accumulibacter phosphatis clade IIA str. UW-1] Length = 182 Score = 41.6 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 18/134 (13%), Positives = 37/134 (27%), Gaps = 26/134 (19%) Query: 28 DTMVENHVPPL------------AIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVND 75 ++ + + + ++ V + + + +S V D Sbjct: 49 APEQDDDGEVAVEKAKPVKKKKVDREVPIYVALDAFTVNLVPD-NGDQFLQLVMSLEVED 107 Query: 76 SQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL------- 125 +Q + L LLS + + L ++IKE +N + Sbjct: 108 AQVADHLKMYTPKLRNDLTLLLSSKKASQLISKEGKEL--LAQEIKEQINGIIEPASKGK 165 Query: 126 -GSQFISEVLIDEL 138 I EVL Sbjct: 166 KRDGPIKEVLFTSF 179 >gi|220917686|ref|YP_002492990.1| flagellar basal body-associated protein FliL [Anaeromyxobacter dehalogenans 2CP-1] gi|219955540|gb|ACL65924.1| flagellar basal body-associated protein FliL [Anaeromyxobacter dehalogenans 2CP-1] Length = 167 Score = 41.6 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 27/102 (26%), Gaps = 6/102 (5%) Query: 41 KNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGP 97 IK + + + Y V V D + L D LS Sbjct: 67 PPGPTIKLADFIV-HLRDTDADRYARVTFDVEVATEEDRTRLTPLVPRVRDAFIAYLSDR 125 Query: 98 PMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + + A + + E L + I + I +L Sbjct: 126 TVEELRGSDA--IARTKAALSERLGALAAGVEIRALYITDLV 165 >gi|197122894|ref|YP_002134845.1| flagellar basal body-associated protein FliL [Anaeromyxobacter sp. K] gi|196172743|gb|ACG73716.1| flagellar basal body-associated protein FliL [Anaeromyxobacter sp. K] Length = 167 Score = 41.6 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 16/102 (15%), Positives = 27/102 (26%), Gaps = 6/102 (5%) Query: 41 KNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGP 97 IK + + + Y V V D + L D LS Sbjct: 67 PPGPTIKLADFIV-HLRDTDADRYARVTFDVEVATEEDRTRLTPLVPRVRDAFIAYLSDR 125 Query: 98 PMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + + A + + E L + I + I +L Sbjct: 126 TVEELRGSDA--IARTKAALSERLGALAAGVEIRALYITDLV 165 >gi|146296291|ref|YP_001180062.1| flagellar basal body-associated protein FliL [Caldicellulosiruptor saccharolyticus DSM 8903] gi|145409867|gb|ABP66871.1| flagellar basal body-associated protein FliL [Caldicellulosiruptor saccharolyticus DSM 8903] Length = 157 Score = 41.6 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 17/114 (14%), Positives = 38/114 (33%), Gaps = 9/114 (7%) Query: 31 VENHVPPLAIKNTNI-IKSELVSIPSVSN--GVLQAYFLVKLSFIVNDSQERSYLKEI-- 85 V K + + ++ + V + V D + +K Sbjct: 44 AAATVEKKPEKTYTYDVNDGKAIMSNLQDTQNNAGRIIRVTVQIEVTDKKLPEEMKNKNI 103 Query: 86 -ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 +D + ++L + ++ + + +RK+IKE LN + + V E Sbjct: 104 VISDIIDSVLRSKTADELLEPEGK--EKVRKEIKERLNEIF-NNKVYNVNFGEF 154 >gi|120613025|ref|YP_972703.1| flagellar basal body-associated protein FliL [Acidovorax citrulli AAC00-1] gi|120591489|gb|ABM34929.1| flagellar basal body-associated protein FliL [Acidovorax citrulli AAC00-1] Length = 222 Score = 41.6 bits (96), Expect = 0.043, Method: Composition-based stats. Identities = 18/138 (13%), Positives = 45/138 (32%), Gaps = 18/138 (13%) Query: 4 FLFSGIWISVVTLISF---YMLFLRSMDTMVENHVPPLAIKN---------TNIIKSELV 51 L I +V + L RS E K + E + Sbjct: 46 VLIIAIVAVLVLAGGGAAWFFLSKRSHGDEDEEGGGGGHAKAAAPAAPKVAPTFLPIENM 105 Query: 52 SIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAF 108 + ++++ + + + ++ + D++ +K + L+S + + Sbjct: 106 VV-NLADPGGERFAQIGITLELADAKTSELVKQYLPSIRSAILMLVSQRTAQEL--LGRE 162 Query: 109 GFDNLRKKIKEDLNSRLG 126 G + L I+ +++ LG Sbjct: 163 GKEKLAVDIRREVSKPLG 180 >gi|218887099|ref|YP_002436420.1| flagellar basal body-associated protein FliL [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758053|gb|ACL08952.1| flagellar basal body-associated protein FliL [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 261 Score = 41.6 bits (96), Expect = 0.048, Method: Composition-based stats. Identities = 20/118 (16%), Positives = 36/118 (30%), Gaps = 7/118 (5%) Query: 29 TMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI--- 85 A I+ E + + +VK S + + + Sbjct: 148 QQAAPSPAEPARPAQTILSWEPFWVEQKDAKGAIRFLVVKFSAPTENQKLVFEAQAKKVV 207 Query: 86 ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSI 143 D +Y L + A + L+K I +N L + ++LI+ NYL Sbjct: 208 IRDAVYYYLKNKSLTYL--TDAANAETLKKDILAIMNEYLSIGKLEDLLIE--NYLVK 261 >gi|239996985|ref|ZP_04717509.1| flagellar basal body-associated protein FliL-like protein [Alteromonas macleodii ATCC 27126] Length = 137 Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 13/115 (11%), Positives = 34/115 (29%), Gaps = 7/115 (6%) Query: 33 NHVPPLAIKNTNIIKSELVSIPSVSNGVLQ--AYFLVKLSFIVND---SQERSYLKEIAT 87 N N + E + + + Q Y V + +++D + + + Sbjct: 20 NTAVAQDKANYAYLGLEPEIVTNYISDSAQKLGYVRVSVELMIHDVNQLEIAEHHMPLLR 79 Query: 88 DYLYTLLSGPPMGDFVQI-KAFGFD-NLRKKIKEDLNSRLGSQFISEVLIDELNY 140 + P + + K ++E + G + + V+ + Y Sbjct: 80 STAIEIFGQQPAEKVKSLTGREDIRRAILKALQEHMKQETGGEVVKNVIFTKYLY 134 >gi|330899435|gb|EGH30854.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. japonica str. M301072PT] Length = 157 Score = 41.2 bits (95), Expect = 0.052, Method: Composition-based stats. Identities = 15/131 (11%), Positives = 34/131 (25%), Gaps = 11/131 (8%) Query: 2 LKFLFSGIWISVVT----LISFYMLF--LRSMDTMVENHVPPLAIKNTNIIKSELVSIPS 55 LK + + ++ + + + L S + + Sbjct: 20 LKLIIIAVVALLLAVGLSVGATWFLMHKSESKVDPAAAAAAANVKPVAVFEPMTPAFVVN 79 Query: 56 VSNGVLQAYFLVKLSF---IVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDN 112 + Q Y V ++ D + + + L L + P G + Sbjct: 80 FNANGRQRYMQVSITMLGRNAADMEALKVHMPLIRNNLVMLFAAIPFESLASP--IGKEM 137 Query: 113 LRKKIKEDLNS 123 LR+K + Sbjct: 138 LRQKATASIQK 148 >gi|298528408|ref|ZP_07015812.1| flagellar basal body-associated protein FliL [Desulfonatronospira thiodismutans ASO3-1] gi|298512060|gb|EFI35962.1| flagellar basal body-associated protein FliL [Desulfonatronospira thiodismutans ASO3-1] Length = 228 Score = 41.2 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 13/110 (11%), Positives = 36/110 (32%), Gaps = 6/110 (5%) Query: 32 ENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATD 88 + P + I+ E + ++ + + + S V +++ D Sbjct: 119 DPIEEPEKDLSEIIVDMEPFMVEFEADNNI-RFLKARFSLSVLGDDMAREVQDKKLVLRD 177 Query: 89 YLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 +Y L + D + + + L LG ++ ++I++ Sbjct: 178 SIYYFLRNKDGSFLQN--SANTDEITRDLMSVLEQYLGRDQLNNIVIEDY 225 >gi|110632651|ref|YP_672859.1| flagellar basal body-associated protein FliL [Mesorhizobium sp. BNC1] gi|110283635|gb|ABG61694.1| flagellar basal body-associated protein FliL [Chelativorans sp. BNC1] Length = 150 Score = 41.2 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 15/153 (9%), Positives = 39/153 (25%), Gaps = 25/153 (16%) Query: 6 FSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN-----------------IIKS 48 + + ++ + ++ + I+ Sbjct: 4 AALLVMTALAGGMGWLTGAYLEERSASGQSENAGKTEVAVQEGQEGNEPDNESLSSIVAL 63 Query: 49 ELVSIPSVSNGVLQAYFLVKLSFI-VNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKA 107 + ++ + + L F +D + + L+ + + Sbjct: 64 DPITTNLAEPTSIWVRMELALVFEGESDPTLARTIHQ----DLFAYIRTLRLKQIESAS- 118 Query: 108 FGFDNLRKKIKEDLNSRLGSQFISEVLIDELNY 140 GF +L+ I E R + +VLI Y Sbjct: 119 -GFQHLKSDILERARIR-SDDRVKQVLIMSFLY 149 >gi|224438010|ref|ZP_03658949.1| flagellar basal body-associated protein FliL [Helicobacter cinaedi CCUG 18818] gi|313144456|ref|ZP_07806649.1| flagellar basal body protein FliL [Helicobacter cinaedi CCUG 18818] gi|313129487|gb|EFR47104.1| flagellar basal body protein FliL [Helicobacter cinaedi CCUG 18818] Length = 196 Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats. Identities = 10/84 (11%), Positives = 30/84 (35%), Gaps = 11/84 (13%) Query: 50 LVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL--------KEIATDYLYTLLSGPPMGD 101 ++ ++ + Y + F ++ + ++ + D + +LS + D Sbjct: 100 PFTVNLMTQTG-KRYLKTSMQFELDKDEAKAMATKAELDNKMPMIKDVVNEILSSKSIED 158 Query: 102 FVQIKAFGFDNLRKKIKEDLNSRL 125 K ++ +I + +N L Sbjct: 159 VATTKGKS--RVKDEIVKRINEFL 180 >gi|325288784|ref|YP_004264965.1| flagellar basal body-associated protein FliL [Syntrophobotulus glycolicus DSM 8271] gi|324964185|gb|ADY54964.1| flagellar basal body-associated protein FliL [Syntrophobotulus glycolicus DSM 8271] Length = 145 Score = 41.2 bits (95), Expect = 0.058, Method: Composition-based stats. Identities = 23/150 (15%), Positives = 48/150 (32%), Gaps = 23/150 (15%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAY 64 + G+ + + S + L+ V K +++ E ++ G+L+A Sbjct: 14 VLVGLVFFGLGIGS---MVLKEKLYPSNEKVVLADNKKGPLVELEEFTVNLDGGGILRAE 70 Query: 65 FLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSR 124 V+ + + K D T+L+ + D Sbjct: 71 LTVE-TVDEKSKKVLEEEKAFLRDKALTVLAAQKITDVST-------------------E 110 Query: 125 LGSQFISEVLIDELNYLSIVDMRSNCLRLG 154 LG + + L+ ELN +S +R + Sbjct: 111 LGREKLRNTLLMELNSISNSKIRDVLFKSY 140 >gi|238764405|ref|ZP_04625355.1| hypothetical protein ykris0001_37730 [Yersinia kristensenii ATCC 33638] gi|238697431|gb|EEP90198.1| hypothetical protein ykris0001_37730 [Yersinia kristensenii ATCC 33638] Length = 156 Score = 41.2 bits (95), Expect = 0.061, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 42/145 (28%), Gaps = 16/145 (11%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS-NGV 60 + + + T Y + + + A + E ++ ++ + Sbjct: 17 ILLVLIAV---AATAGGGY---SWWILNKSKPTIAKAAPVIPVFMPLETFTVNLITPDNN 70 Query: 61 LQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 L + L+ + D R+ L L LLS + L +I Sbjct: 71 LDRVLYIGLTLRLPDDSTRAKLNDYLPEVRSRLLLLLSRQSADSLANEEGK--QRLVGEI 128 Query: 118 KEDLN--SRLGSQ--FISEVLIDEL 138 K L+ G +S+VL Sbjct: 129 KNVLSPPMVKGQPNQVVSDVLFTAF 153 >gi|283832661|ref|ZP_06352402.1| flagellar basal body-associated protein FliL [Citrobacter youngae ATCC 29220] gi|291072335|gb|EFE10444.1| flagellar basal body-associated protein FliL [Citrobacter youngae ATCC 29220] Length = 155 Score = 41.2 bits (95), Expect = 0.063, Method: Composition-based stats. Identities = 13/140 (9%), Positives = 33/140 (23%), Gaps = 6/140 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + L + T Y + P + ++ ++ + Sbjct: 16 IPLLVLITLAACATAGYSYWRMQQ--QPSASVKAEPAPPPAPVFFALDTFTV-NLGDADR 72 Query: 62 QAYFLVKLSFI-VNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFG--FDNLRKKIK 118 Y + L + L L S + ++++ + Sbjct: 73 VLYIGITLRMKDEATRARLNEYLPEVRSRLLLLFSRQNAATLATEEGKQQLIADIKETLA 132 Query: 119 EDLNSRLGSQFISEVLIDEL 138 L Q +++VL Sbjct: 133 TPLVVGQPKQVVTDVLYTAF 152 >gi|224127288|ref|XP_002320037.1| predicted protein [Populus trichocarpa] gi|222860810|gb|EEE98352.1| predicted protein [Populus trichocarpa] Length = 804 Score = 41.2 bits (95), Expect = 0.063, Method: Composition-based stats. Identities = 19/126 (15%), Positives = 37/126 (29%), Gaps = 19/126 (15%) Query: 31 VENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA---------YFLVKLSFIVNDSQERSY 81 ++ P T I + + +P + V DS + Sbjct: 175 PPSNTEPSTESRTETINLD-IYVPLDERFSPKKLSEFISNSIQATVHFIITEADSLFKQD 233 Query: 82 LKEI-ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNY 140 + D ++ + S + L+ K+KE L + +VL E+ Y Sbjct: 234 SSSFESFDEIHDMFSSKRSNAVEGKAK---NKLKGKVKERLKK-----LVPDVLFKEIIY 285 Query: 141 LSIVDM 146 D+ Sbjct: 286 TGKEDL 291 >gi|156933436|ref|YP_001437352.1| flagellar basal body-associated protein FliL [Cronobacter sakazakii ATCC BAA-894] gi|156531690|gb|ABU76516.1| hypothetical protein ESA_01254 [Cronobacter sakazakii ATCC BAA-894] Length = 157 Score = 41.2 bits (95), Expect = 0.063, Method: Composition-based stats. Identities = 16/140 (11%), Positives = 37/140 (26%), Gaps = 6/140 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + L + T Y + T + + ++ ++ + Sbjct: 18 IPLLVIITLAACATAGYSYWRMQQHGTTAAKAAP--EPPPAPVFFALDTFTV-NLGDADR 74 Query: 62 QAYFLVKLSFI-VNDSQERSYLKEIATDYLYTLLSGPPMGDFV--QIKAFGFDNLRKKIK 118 Y + L Q S L L S + K + +++ + Sbjct: 75 VLYVGITLRLKDEATRQRLSDYLPEVRSRLLLLFSRQDASQLATDEGKQKLVEAIKQTLS 134 Query: 119 EDLNSRLGSQFISEVLIDEL 138 L + Q +++VL Sbjct: 135 APLVAGQPKQVVTDVLYTAF 154 >gi|87306565|ref|ZP_01088712.1| hypothetical protein DSM3645_09537 [Blastopirellula marina DSM 3645] gi|87290744|gb|EAQ82631.1| hypothetical protein DSM3645_09537 [Blastopirellula marina DSM 3645] Length = 159 Score = 40.8 bits (94), Expect = 0.065, Method: Composition-based stats. Identities = 15/150 (10%), Positives = 39/150 (26%), Gaps = 23/150 (15%) Query: 9 IWI--SVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSV---------- 56 +W+ + L S + + I+ SI + Sbjct: 10 LWLIGCLAALASAFGCGSSKPAPTSFEPWIEEKVS-WEEIELGEFSITVLAADDPTRMPD 68 Query: 57 ---SNGVLQAYFLVKLSFIVNDSQERSYLKE----IATDYLYTLLSGPPMGDFVQIKAFG 109 + +F ND + + E +D + + D + Sbjct: 69 LDEYQNSVAIHFNTHCLVDPNDKAKVVEILESRKGRLSDEVIRTCRNANLIDLADPE--- 125 Query: 110 FDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 +R ++++ + +G I + + Sbjct: 126 LRLVRAQLRDFSDQLVGPSLIKRFVFTNVT 155 >gi|260598453|ref|YP_003211024.1| flagellar basal body-associated protein FliL [Cronobacter turicensis z3032] gi|260217630|emb|CBA31925.1| Flagellar fliL protein [Cronobacter turicensis z3032] Length = 158 Score = 40.8 bits (94), Expect = 0.069, Method: Composition-based stats. Identities = 16/140 (11%), Positives = 37/140 (26%), Gaps = 6/140 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + L + T Y + T + + ++ ++ + Sbjct: 19 IPLLVIITLAACATAGYSYWRMQQHGTTAAKAAP--EPPPAPVFFALDTFTV-NLGDADR 75 Query: 62 QAYFLVKLSFI-VNDSQERSYLKEIATDYLYTLLSGPPMGDFV--QIKAFGFDNLRKKIK 118 Y + L Q S L L S + K + +++ + Sbjct: 76 VLYVGITLRLKDEATRQRLSDYLPEVRSRLLLLFSRQDASQLATDEGKQKLVEAIKQTLS 135 Query: 119 EDLNSRLGSQFISEVLIDEL 138 L + Q +++VL Sbjct: 136 APLVAGQPKQVVTDVLYTAF 155 >gi|238751774|ref|ZP_04613262.1| hypothetical protein yrohd0001_35480 [Yersinia rohdei ATCC 43380] gi|238710045|gb|EEQ02275.1| hypothetical protein yrohd0001_35480 [Yersinia rohdei ATCC 43380] Length = 141 Score = 40.8 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 15/152 (9%), Positives = 42/152 (27%), Gaps = 28/152 (18%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS-NG 59 M+ + + + Y + + V + E ++ ++ + Sbjct: 1 MILLVLIAV---AASAGGGY---SWWILHKSKPAVAKATPVAPVFMPLETFTVNLITPDN 54 Query: 60 VLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNL-----R 114 L + L+ + D L L + + D+L + Sbjct: 55 NLDRVLYIGLTLRLPDE--------FTRVELNNYLPEVRSRLLLLLSRQSADSLSNEAGK 106 Query: 115 KKIKEDLNSRLGSQ--------FISEVLIDEL 138 +++ ++ + L +S+VL Sbjct: 107 QRLVAEIKNVLSPPMVKGQPNQVVSDVLFTAF 138 >gi|294636876|ref|ZP_06715206.1| flagellar basal body-associated protein FliL [Edwardsiella tarda ATCC 23685] gi|291089906|gb|EFE22467.1| flagellar basal body-associated protein FliL [Edwardsiella tarda ATCC 23685] Length = 159 Score = 40.8 bits (94), Expect = 0.077, Method: Composition-based stats. Identities = 12/129 (9%), Positives = 35/129 (27%), Gaps = 9/129 (6%) Query: 17 ISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVS-NGVLQAYFLVKLSFIVND 75 Y + + + ++ + + V ++ + + Sbjct: 30 GGGYFG-WHYYQQSQSHVAKQAPAPLPVFMALDPFTVNLLGNDDDSDRVLYVGITLRLPN 88 Query: 76 S---QERSYLKEIATDYLYTLLSGPPMGDFV--QIKAFGFDNLRKKIKE-DLNSRLGSQF 129 + + L LLS Q K D ++ ++ +N + G Sbjct: 89 ELTRKRLNDYLPEVRSRLLLLLSRQQASALATEQGKKALMDEIKATLRAPVINGQAGQ-V 147 Query: 130 ISEVLIDEL 138 +++V+ Sbjct: 148 VNDVMFTAF 156 >gi|84683695|ref|ZP_01011598.1| NolF secretion protein [Maritimibacter alkaliphilus HTCC2654] gi|84668438|gb|EAQ14905.1| NolF secretion protein [Rhodobacterales bacterium HTCC2654] Length = 405 Score = 40.8 bits (94), Expect = 0.080, Method: Composition-based stats. Identities = 12/118 (10%), Positives = 33/118 (27%), Gaps = 5/118 (4%) Query: 6 FSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNI--IKSELVSIPSVSNGVLQA 63 + ++V +Y + P+ + ++ + V+ G L Sbjct: 35 LVLLVLAVTAGGGYYYADQNGLIPEPPEQAAPVEPEAPAELIVRLAPFEVTEVAPGDLSE 94 Query: 64 YFLVKLSFIVNDS-QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 V S + + + D G + + + F +L ++ + Sbjct: 95 TLRVTGSLTPSRQVHLSAEVSARLLDVTVRE--GDSVKEGALLAQFDVVSLENQLAQA 150 >gi|157736469|ref|YP_001489152.1| flagellar basal body-associated protein [Arcobacter butzleri RM4018] gi|157698323|gb|ABV66483.1| flagellar basal body-associated protein [Arcobacter butzleri RM4018] Length = 175 Score = 40.8 bits (94), Expect = 0.080, Method: Composition-based stats. Identities = 15/144 (10%), Positives = 39/144 (27%), Gaps = 20/144 (13%) Query: 14 VTLISFYMLF---------LRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAY 64 Y L + + + P + T + + + + Sbjct: 32 AVAGGTYFLLDKISSTANNGQKTEESAQTATPANTSEATFKADVNDLVLNLTDSRGKEKV 91 Query: 65 FLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDL 121 + S ND K TD + + +S + + + L+ ++ ++ Sbjct: 92 MKLSFSIRSNDPLIATVIEEYKAEITDVVISQVSSRSSEELLTVGGKNL--LKDELIAEI 149 Query: 122 NSRL------GSQFISEVLIDELN 139 N+ + +S +L Sbjct: 150 NNVINYVTKSNRNVVSTILFTTFV 173 >gi|326577859|gb|EGE27725.1| lactoferrin binding protein A LbpA [Moraxella catarrhalis O35E] Length = 1000 Score = 40.8 bits (94), Expect = 0.082, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 32/101 (31%), Gaps = 7/101 (6%) Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ 104 +IP+++ Q Y L ++ + +D ++ L + Sbjct: 768 YKDMLDKAIPNLTK-AQQEYCKAHLD---SNECVGNPPTPKTSDEVFANLYNATIKGVSV 823 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD 145 + K+ + L LG + + +Y++ D Sbjct: 824 KGKLDLHAMTSKLPDGLEMTLGYGHTK---LGKFDYIAPKD 861 >gi|326573618|gb|EGE23577.1| lactoferrin binding protein A LbpA [Moraxella catarrhalis CO72] Length = 1000 Score = 40.8 bits (94), Expect = 0.082, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 32/101 (31%), Gaps = 7/101 (6%) Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ 104 +IP+++ Q Y L ++ + +D ++ L + Sbjct: 768 YKDMLDKAIPNLTK-AQQEYCKAHLD---SNECVGNPPTPKTSDEVFANLYNATIKGVSV 823 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD 145 + K+ + L LG + + +Y++ D Sbjct: 824 KGKLDLHAMTSKLPDGLEMTLGYGHTK---LGKFDYIAPKD 861 >gi|326570310|gb|EGE20354.1| lactoferrin binding protein A LbpA [Moraxella catarrhalis BC1] Length = 1000 Score = 40.8 bits (94), Expect = 0.082, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 32/101 (31%), Gaps = 7/101 (6%) Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ 104 +IP+++ Q Y L ++ + +D ++ L + Sbjct: 768 YKDMLDKAIPNLTK-AQQEYCKAHLD---SNECVGNPPTPKTSDEVFANLYNATIKGVSV 823 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD 145 + K+ + L LG + + +Y++ D Sbjct: 824 KGKLDLHAMTSKLPDGLEMTLGYGHTK---LGKFDYIAPKD 861 >gi|326569586|gb|EGE19640.1| lactoferrin binding protein A LbpA [Moraxella catarrhalis BC8] Length = 1000 Score = 40.8 bits (94), Expect = 0.082, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 32/101 (31%), Gaps = 7/101 (6%) Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ 104 +IP+++ Q Y L ++ + +D ++ L + Sbjct: 768 YKDMLDKAIPNLTK-AQQEYCKAHLD---SNECVGNPPTPKTSDEVFANLYNATIKGVSV 823 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD 145 + K+ + L LG + + +Y++ D Sbjct: 824 KGKLDLHAMTSKLPDGLEMTLGYGHTK---LGKFDYIAPKD 861 >gi|326565113|gb|EGE15305.1| lactoferrin binding protein A LbpA [Moraxella catarrhalis 12P80B1] gi|326572346|gb|EGE22339.1| lactoferrin binding protein A LbpA [Moraxella catarrhalis BC7] Length = 1000 Score = 40.8 bits (94), Expect = 0.082, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 32/101 (31%), Gaps = 7/101 (6%) Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ 104 +IP+++ Q Y L ++ + +D ++ L + Sbjct: 768 YKDMLDKAIPNLTK-AQQEYCKAHLD---SNECVGNPPTPKTSDEVFANLYNATIKGVSV 823 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD 145 + K+ + L LG + + +Y++ D Sbjct: 824 KGKLDLHAMTSKLPDGLEMTLGYGHTK---LGKFDYIAPKD 861 >gi|326563025|gb|EGE13299.1| lactoferrin binding protein A LbpA [Moraxella catarrhalis 103P14B1] gi|326577307|gb|EGE27195.1| lactoferrin binding protein A LbpA [Moraxella catarrhalis 101P30B1] Length = 1000 Score = 40.8 bits (94), Expect = 0.082, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 32/101 (31%), Gaps = 7/101 (6%) Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ 104 +IP+++ Q Y L ++ + +D ++ L + Sbjct: 768 YKDMLDKAIPNLTK-AQQEYCKAHLD---SNECVGNPPTPKTSDEVFANLYNATIKGVSV 823 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD 145 + K+ + L LG + + +Y++ D Sbjct: 824 KGKLDLHAMTSKLPDGLEMTLGYGHTK---LGKFDYIAPKD 861 >gi|296112446|ref|YP_003626384.1| lactoferrin binding protein A LbpA [Moraxella catarrhalis RH4] gi|295920140|gb|ADG60491.1| lactoferrin binding protein A LbpA [Moraxella catarrhalis RH4] gi|326561947|gb|EGE12282.1| lactoferrin binding protein A LbpA [Moraxella catarrhalis 7169] Length = 1000 Score = 40.8 bits (94), Expect = 0.082, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 32/101 (31%), Gaps = 7/101 (6%) Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ 104 +IP+++ Q Y L ++ + +D ++ L + Sbjct: 768 YKDMLDKAIPNLTK-AQQEYCKAHLD---SNECVGNPPTPKTSDEVFANLYNATIKGVSV 823 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD 145 + K+ + L LG + + +Y++ D Sbjct: 824 KGKLDLHAMTSKLPDGLEMTLGYGHTK---LGKFDYIAPKD 861 >gi|3414693|gb|AAC31370.1| lactoferrin binding protein A [Moraxella catarrhalis] gi|326562249|gb|EGE12576.1| lactoferrin binding protein A LbpA [Moraxella catarrhalis 46P47B1] Length = 1000 Score = 40.8 bits (94), Expect = 0.082, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 32/101 (31%), Gaps = 7/101 (6%) Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ 104 +IP+++ Q Y L ++ + +D ++ L + Sbjct: 768 YKDMLDKAIPNLTK-AQQEYCKAHLD---SNECVGNPPTPKTSDEVFANLYNATIKGVSV 823 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD 145 + K+ + L LG + + +Y++ D Sbjct: 824 KGKLDLHAMTSKLPDGLEMTLGYGHTK---LGKFDYIAPKD 861 >gi|3414688|gb|AAC31366.1| lactoferrin binding protein A [Moraxella catarrhalis] Length = 1000 Score = 40.8 bits (94), Expect = 0.082, Method: Composition-based stats. Identities = 13/101 (12%), Positives = 32/101 (31%), Gaps = 7/101 (6%) Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ 104 +IP+++ Q Y L ++ + +D ++ L + Sbjct: 768 YKDMLDKAIPNLTK-AQQEYCKAHLD---SNECVGNPPTPKTSDEVFANLYNATIKGVSV 823 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD 145 + K+ + L LG + + +Y++ D Sbjct: 824 KGKLDLHAMTSKLPDGLEMTLGYGHTK---LGKFDYIAPKD 861 >gi|126176413|ref|YP_001052562.1| flagellar basal body-associated protein FliL-like protein [Shewanella baltica OS155] gi|160873257|ref|YP_001552573.1| flagellar basal body-associated protein FliL-like protein [Shewanella baltica OS195] gi|304412623|ref|ZP_07394227.1| flagellar basal body-associated protein FliL [Shewanella baltica OS183] gi|307307234|ref|ZP_07586971.1| flagellar basal body-associated protein FliL [Shewanella baltica BA175] gi|125999618|gb|ABN63693.1| flagellar basal body-associated protein FliL [Shewanella baltica OS155] gi|160858779|gb|ABX47313.1| flagellar basal body-associated protein FliL [Shewanella baltica OS195] gi|304348967|gb|EFM13381.1| flagellar basal body-associated protein FliL [Shewanella baltica OS183] gi|306910289|gb|EFN40721.1| flagellar basal body-associated protein FliL [Shewanella baltica BA175] gi|315265482|gb|ADT92335.1| flagellar basal body-associated protein FliL [Shewanella baltica OS678] Length = 140 Score = 40.8 bits (94), Expect = 0.082, Method: Composition-based stats. Identities = 16/147 (10%), Positives = 40/147 (27%), Gaps = 15/147 (10%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M K L + ++ S + ++ P + +SN Sbjct: 1 MKKLLS----VCLILFTSVFSVYAADEKEAAPAATPTGEYAYYGFEP--EIVTNYISNRK 54 Query: 61 LQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + + + +V +D + + +L + + +R++ Sbjct: 55 KLGFVKISVELMVKSPDDLVTVERHDPLLRAAIVEVLGNQSEEKIKSLTGR--EEIRREC 112 Query: 118 KEDLN----SRLGSQFISEVLIDELNY 140 + +N G I +L Y Sbjct: 113 FDMVNNLLTQEAGKALIVNLLFTSYLY 139 >gi|217971343|ref|YP_002356094.1| flagellar basal body-associated protein FliL-like protein [Shewanella baltica OS223] gi|217496478|gb|ACK44671.1| flagellar basal body-associated protein FliL [Shewanella baltica OS223] Length = 140 Score = 40.8 bits (94), Expect = 0.083, Method: Composition-based stats. Identities = 16/147 (10%), Positives = 40/147 (27%), Gaps = 15/147 (10%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M K L + ++ S + ++ P + +SN Sbjct: 1 MKKLLS----VCLILFTSVFSVYAADEKEAAPAATPTGEYAYYGFEP--EIVTNYISNRK 54 Query: 61 LQAYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + + + +V +D + + +L + + +R++ Sbjct: 55 KLGFVKISVELMVKSPDDLVTVERHDPLLRAAIVEVLGNQSEEKIKSLTGR--EEIRREC 112 Query: 118 KEDLN----SRLGSQFISEVLIDELNY 140 + +N G I +L Y Sbjct: 113 FDMVNNLLTKEAGKALIVNLLFTSYLY 139 >gi|212639556|ref|YP_002316076.1| flagellar basal body-associated protein FliL [Anoxybacillus flavithermus WK1] gi|212561036|gb|ACJ34091.1| Flagellar basal body-associated protein FliL [Anoxybacillus flavithermus WK1] Length = 148 Score = 40.4 bits (93), Expect = 0.085, Method: Composition-based stats. Identities = 19/142 (13%), Positives = 46/142 (32%), Gaps = 12/142 (8%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSI-PSVSNG 59 MLK + I V + + + M M N + ++ I ++ +G Sbjct: 12 MLKMMLI---IMGVITLVSVVALVVVMKFMGNNEPKEPTVDEIVASSFDVPEIMTNLMDG 68 Query: 60 VLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 + + + + + ++ + + LS F + L KK Sbjct: 69 S---FIKIAFKIQTDSEKAKEEAEKRDFQIKNIIIEELSEMTAEQFKGKQGKLL--LEKK 123 Query: 117 IKEDLNSRLGSQFISEVLIDEL 138 ++E +N + + ++ I Sbjct: 124 LRERINELMQEGKVEKIYITSF 145 >gi|261884816|ref|ZP_06008855.1| flagellar basal body-associated protein FliL [Campylobacter fetus subsp. venerealis str. Azul-94] Length = 109 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 6/99 (6%), Positives = 21/99 (21%), Gaps = 8/99 (8%) Query: 22 LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY 81 + + + + +S + L+ +++ Sbjct: 9 STQQQAAPSPKQRSNDFFNVGPMY-PMDQFVVNFLSE-SGSRFLKTTLNLELSEQTLSPE 66 Query: 82 LK---EIATDYLYTLLSGPPMGDFVQI---KAFGFDNLR 114 + + D + LS D + + Sbjct: 67 IDKKEPLIRDIIIRNLSSKTYEDVSTSKGKERLDLQACK 105 >gi|187778760|ref|ZP_02995233.1| hypothetical protein CLOSPO_02355 [Clostridium sporogenes ATCC 15579] gi|187772385|gb|EDU36187.1| hypothetical protein CLOSPO_02355 [Clostridium sporogenes ATCC 15579] Length = 173 Score = 40.4 bits (93), Expect = 0.088, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 49/147 (33%), Gaps = 26/147 (17%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVS--------------------IP 54 +F L + + N + + NTN+I S+ + + Sbjct: 27 GAGAFGGYMLFAKNKKSANSTNQMPVNNTNVINSQQTNNGMYPQQVVVSSKTYSLDEFLV 86 Query: 55 SVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFD 111 ++++ + + K+ + + L+ I D + +L D D Sbjct: 87 NLADEDGKRFVKAKIFIGYEEKKLAKELETKKPILRDAVIGVLRSKKAADI---NPKNID 143 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDEL 138 ++ +I ++ L I+ + D+L Sbjct: 144 KIKVEIINKISPMLEKGRINSIYFDDL 170 >gi|303248006|ref|ZP_07334272.1| flagellar basal body-associated protein FliL [Desulfovibrio fructosovorans JJ] gi|302490563|gb|EFL50468.1| flagellar basal body-associated protein FliL [Desulfovibrio fructosovorans JJ] Length = 234 Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats. Identities = 19/165 (11%), Positives = 45/165 (27%), Gaps = 28/165 (16%) Query: 3 KFLFSGI-WISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN----------------- 44 K + + ++ + Y LR E+ + Sbjct: 74 KLILIVAPVLLLLIGAAVYFFLLRKPAPPPESAEETPPAEEAPMPPPAPVPPPPEPPAPK 133 Query: 45 ---IIKSELVSIPSVSNGVLQAYFLVKLSF---IVNDSQERSYLKEIATDYLYTLLSGPP 98 ++ E + + ++ + E + D +Y L Sbjct: 134 QEIVMPMEPFLVELTDAQGRTRFLTIRFTAVTQEKPVELEFKRNIIVVRDAVYYYLKNKK 193 Query: 99 MGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSI 143 + L+K + +N +G+Q + +LI++ YL Sbjct: 194 FEFLA--DKNNAEVLKKDVLSVINQFIGAQPLDNLLIED--YLVK 234 >gi|163793219|ref|ZP_02187195.1| hypothetical protein BAL199_25559 [alpha proteobacterium BAL199] gi|159181865|gb|EDP66377.1| hypothetical protein BAL199_25559 [alpha proteobacterium BAL199] Length = 112 Score = 40.4 bits (93), Expect = 0.092, Method: Composition-based stats. Identities = 10/83 (12%), Positives = 27/83 (32%), Gaps = 13/83 (15%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMV-------------ENHVPPLAIKNTNIIKS 48 +K + + + + + + + + KNT +I Sbjct: 1 MKLIVIIVALLALVGGGGFAAITFAPSMVPIPIRNLLGVEVTEAEQIEADRPKNTTLIDI 60 Query: 49 ELVSIPSVSNGVLQAYFLVKLSF 71 E ++IP NG + + ++ + Sbjct: 61 EPLTIPMFENGEVDRFLVMHVLL 83 >gi|85859188|ref|YP_461390.1| flagellar biosynthesis protein [Syntrophus aciditrophicus SB] gi|85722279|gb|ABC77222.1| flagellar biosynthesis protein [Syntrophus aciditrophicus SB] Length = 192 Score = 40.4 bits (93), Expect = 0.092, Method: Composition-based stats. Identities = 14/138 (10%), Positives = 42/138 (30%), Gaps = 10/138 (7%) Query: 8 GIWISVVTLISFYMLF-----LRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 + + + L + + +K + I G + Sbjct: 55 CLAFVAFSSGIAFFLVDFHTLKFNNAPVENITPVQQPVK-CKFASLQDFIINFKDGGGKE 113 Query: 63 AYFLVKLSFIVNDSQERSYLKEI--ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 F+ L+ ++ + ++ + +Y L + ++ + LR + + Sbjct: 114 KIFVCALALEISPDHKLAFKDDHFDIRKMIYKKLLTCSRENTSFLQ--DRNRLRDFLFVE 171 Query: 121 LNSRLGSQFISEVLIDEL 138 LN +LG ++ + + Sbjct: 172 LNQQLGGNIVTGIYFTKF 189 >gi|42527824|ref|NP_972922.1| flagellar protein FliL-related protein [Treponema denticola ATCC 35405] gi|41818652|gb|AAS12841.1| flagellar protein FliL-related protein [Treponema denticola ATCC 35405] Length = 158 Score = 40.4 bits (93), Expect = 0.097, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 9/145 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN--IIKSELVSIPSVSNG 59 LK++ + + ++ + S + LF + V P I+ + IP+ Sbjct: 17 LKYVLFAVVLIII-VGSVFSLFKKKNTDEVLRSESPSEIRGKKALYSDLGRLRIPTADIH 75 Query: 60 VLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 L + D L + L S + + + + ++K+ Sbjct: 76 TGTLVVFPVLEYNSEDKAFEEELVQKKEDIRKSLIDWFSQKTVYELYTMPE---NEVKKE 132 Query: 117 IKEDLNSRLGSQFISEVLIDELNYL 141 + ++NS L I + + L Sbjct: 133 VLAEINSILNLSRIKRIYFKDFVIL 157 >gi|317153072|ref|YP_004121120.1| flagellar basal body-associated protein FliL [Desulfovibrio aespoeensis Aspo-2] gi|316943323|gb|ADU62374.1| flagellar basal body-associated protein FliL [Desulfovibrio aespoeensis Aspo-2] Length = 235 Score = 40.4 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 11/97 (11%), Positives = 32/97 (32%), Gaps = 5/97 (5%) Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKE---IATDYLYTLLSGPPMGD 101 +I+ + I + + V++ D K+ + ++ L + Sbjct: 138 LIRLDPFLIEQRDKDNVIRFLEVRVLVSTQDEGLAKQFKQDTYTVRNAIFYYLKNKDLQF 197 Query: 102 FVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 D L++++ +N +G +L ++ Sbjct: 198 LSN--KENSDKLKQELLAIINQYMGFGQFDTILFEQY 232 >gi|224129376|ref|XP_002320571.1| predicted protein [Populus trichocarpa] gi|222861344|gb|EEE98886.1| predicted protein [Populus trichocarpa] Length = 753 Score = 40.4 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 37/126 (29%), Gaps = 19/126 (15%) Query: 31 VENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA---------YFLVKLSFIVNDSQERSY 81 ++ P T I + + +P + V DS + Sbjct: 124 PPSNTEPSTESRTETINLD-IYVPPDERFSPKKLSEFISNSIQATVHFIITEADSLFKQD 182 Query: 82 LKEI-ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNY 140 + D ++ + S D L+ K+KE L + +VL E+ Y Sbjct: 183 SSSFESFDEIHDMFSSKRSKAVEGKAK---DKLKGKVKERLKK-----LVPDVLFKEITY 234 Query: 141 LSIVDM 146 D+ Sbjct: 235 AGKEDL 240 >gi|261855320|ref|YP_003262603.1| flagellar basal body-associated protein FliL [Halothiobacillus neapolitanus c2] gi|261835789|gb|ACX95556.1| flagellar basal body-associated protein FliL [Halothiobacillus neapolitanus c2] Length = 185 Score = 40.4 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 17/159 (10%), Positives = 44/159 (27%), Gaps = 26/159 (16%) Query: 4 FLFSGIWISVVTLISFYML----------------FLRSMDTMVENHVPPLAIKNTNIIK 47 + + ++ V + + +L + + Sbjct: 26 IVIIVLLLAAVGVGAMLLLKKPAAESANAAATTEQTTEGHANGDQKAGDSEKHGAPITVS 85 Query: 48 SELVSIPSVSNGVLQAYFLVKLSFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFVQ 104 +++ V+L I D + + + +LS Sbjct: 86 LGQPITVNLAEPNDAKLLQVELDLITYDPDAEAMVKTNRAEIINNIMLVLSDVNAAKLRT 145 Query: 105 IKAFGFDNLRKKIKEDLNSRLG-----SQFISEVLIDEL 138 + ++L+K++KE +N+ L I +V +L Sbjct: 146 RQGK--EDLQKQLKEAVNAVLEKRSGKKDEIDDVYFTKL 182 >gi|149182514|ref|ZP_01860987.1| flagellar basal body-associated protein FliL [Bacillus sp. SG-1] gi|148849774|gb|EDL63951.1| flagellar basal body-associated protein FliL [Bacillus sp. SG-1] Length = 140 Score = 40.4 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 19/138 (13%), Positives = 41/138 (29%), Gaps = 9/138 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 S I + +TL+ L + E P + + ++ +S Sbjct: 6 LTISLILLVTITLVGVLALIVVLKFNEEEVKEPSIDEVIEASVDVPEITTNLLSGD---- 61 Query: 64 YFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 Y + + + + L++ + + LS + L IK+ Sbjct: 62 YIRISFKVQTDSKKAKEELEKRDFQVKNIIIEELSEMKSDQLQGKEGK--QELETTIKDK 119 Query: 121 LNSRLGSQFISEVLIDEL 138 NS + + +V I Sbjct: 120 ANSLMQEGKVEKVYITSY 137 >gi|302338089|ref|YP_003803295.1| flagellar basal body-associated protein FliL [Spirochaeta smaragdinae DSM 11293] gi|301635274|gb|ADK80701.1| flagellar basal body-associated protein FliL [Spirochaeta smaragdinae DSM 11293] Length = 181 Score = 40.4 bits (93), Expect = 0.11, Method: Composition-based stats. Identities = 19/147 (12%), Positives = 51/147 (34%), Gaps = 12/147 (8%) Query: 2 LKFLFSGIW--ISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNII----KSELVSIPS 55 LK++ G+ I +VT++ + + P A + I + + Sbjct: 34 LKWVALGLAAIIFIVTVVFITVSVMTKGPKAEAYPSPSEAYQQVQPILQWYDVGEIRTRT 93 Query: 56 VSNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDN 112 +KL + +++ ++ + + D + ++ A Sbjct: 94 SDENPATVIVSIKLGYDMDNKNAQNEINQRREQIVDQT-RYFFSRKLE--AELNANYEPQ 150 Query: 113 LRKKIKEDLNSRLGSQFISEVLIDELN 139 L+ ++KE +N + ++ +V+ N Sbjct: 151 LKNELKEMINKMMDKPYVKDVVFLSFN 177 >gi|283850863|ref|ZP_06368149.1| flagellar basal body-associated protein FliL [Desulfovibrio sp. FW1012B] gi|283573786|gb|EFC21760.1| flagellar basal body-associated protein FliL [Desulfovibrio sp. FW1012B] Length = 131 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 9/88 (10%), Positives = 29/88 (32%), Gaps = 3/88 (3%) Query: 55 SVSNGVLQAYFLVKLSFI-VNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113 ++++G A + V+ + + + L + + + L Sbjct: 46 NIADGGRLARLHIAFEAQCVDAPSAQMAAAPQTREAILLFLRDKTVAELATVPGK--RKL 103 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELNYL 141 ++ + +N +G + + +L L Sbjct: 104 KQDLLAVMNKAVGGPRVVRLYFLQLVVL 131 >gi|289208343|ref|YP_003460409.1| flagellar basal body-associated protein FliL [Thioalkalivibrio sp. K90mix] gi|288943974|gb|ADC71673.1| flagellar basal body-associated protein FliL [Thioalkalivibrio sp. K90mix] Length = 162 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 19/100 (19%), Positives = 33/100 (33%), Gaps = 6/100 (6%) Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQE---RSYLKEIATDYLYTLLSGPPMGD 101 E +++ G + Y ++LS + D + + + LL D Sbjct: 62 YHGLEPMTVNIDGPGRI-RYLRLELSVVTTDPEVIAALERHMPAVRNDVLGLLGEKHYDD 120 Query: 102 F--VQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 K + LR+ I E L R + V +EL Sbjct: 121 LNTRDGKESLAEELREAIAEILEERDAPHDVEAVRFNELV 160 >gi|172057878|ref|YP_001814338.1| flagellar basal body-associated protein FliL [Exiguobacterium sibiricum 255-15] gi|171990399|gb|ACB61321.1| flagellar basal body-associated protein FliL [Exiguobacterium sibiricum 255-15] Length = 149 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 16/134 (11%), Positives = 44/134 (32%), Gaps = 12/134 (8%) Query: 9 IWISVVTLISFYMLFLR--SMDTMVENHVPPLAIKNTN-IIKSELVSIPSVSNGVLQAYF 65 I ++++ + + YML + D P + +++ ++ + + Sbjct: 17 IVVAIMMVGAGYMLSKYLLTSDPTEAKVEQPTGAELEERSFQTDDLTTNI----ADERFL 72 Query: 66 LVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN 122 V+ + + +D+ R L+ + + L+ D L +K++ Sbjct: 73 NVQFTIVTDDAATREELELRKFQINNIILGDLASMKKQDLD--SKQDMAKLEEKLRGQFK 130 Query: 123 SRLGSQFISEVLID 136 L + V Sbjct: 131 KLLQEGDVQRVYTT 144 >gi|157147081|ref|YP_001454399.1| hypothetical protein CKO_02858 [Citrobacter koseri ATCC BAA-895] gi|157084286|gb|ABV13964.1| hypothetical protein CKO_02858 [Citrobacter koseri ATCC BAA-895] Length = 156 Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 14/142 (9%), Positives = 44/142 (30%), Gaps = 6/142 (4%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHV--PPLAIKNTNIIKSELVSIPSVSNGVLQ 62 L + + + +T+ ++L + + ++ + + I G + Sbjct: 14 LVTALLTACLTVAGTWLLRADTASESNPLTSLFKSSTPQQVEFVEIKNILITLKGKGNAE 73 Query: 63 AYFLVKLSF---IVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF-DNLRKKIK 118 Y +++L+ +++ + L S + D L+ Sbjct: 74 RYLMLELNLATMSAENARTAQDMIPAIRGATVNLFSEMDYDAVRALSVSNLHDKLKAAYA 133 Query: 119 EDLNSRLGSQFISEVLIDELNY 140 +S +V+I ++ + Sbjct: 134 ARFDSLKMDVPFDDVIISKMVF 155 >gi|170760109|ref|YP_001787971.1| flagellar basal body-associated protein FliL [Clostridium botulinum A3 str. Loch Maree] gi|169407098|gb|ACA55509.1| flagellar basal body-associated protein FliL [Clostridium botulinum A3 str. Loch Maree] Length = 173 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 49/147 (33%), Gaps = 26/147 (17%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVS--------------------IP 54 +F L + + N + + NTN+I S+ + + Sbjct: 27 GAGAFGGYMLFAKNKKNANGANQMPVNNTNVINSQQTNDGMYQQQVVVSSKTYSLDEVLV 86 Query: 55 SVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFD 111 ++++ + + K+ + + L+ I D + +L D D Sbjct: 87 NLADEDGKRFIKAKIFIGYEEKKLSKELETKKPILRDAVIGVLRSKKAADI---NPKNID 143 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDEL 138 ++ +I ++ L IS + D+L Sbjct: 144 KIKVEIINKISPMLEKGRISSIYFDDL 170 >gi|153939184|ref|YP_001391951.1| flagellar basal body-associated protein FliL [Clostridium botulinum F str. Langeland] gi|152935080|gb|ABS40578.1| flagellar basal body-associated protein FliL [Clostridium botulinum F str. Langeland] Length = 173 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 49/147 (33%), Gaps = 26/147 (17%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVS--------------------IP 54 +F L + + N + + NTN+I S+ + + Sbjct: 27 GAGAFGGYMLFAKNKKNANSANQMPVNNTNVINSQQTNDGMYQQQVVVSSKTYSLDEVLV 86 Query: 55 SVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFD 111 ++++ + + K+ + + L+ I D + +L D D Sbjct: 87 NLADEDGKRFIKAKIFIGYEEKKLSKELETKKPILRDAVIGVLRSKKAADI---NPKNID 143 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDEL 138 ++ +I ++ L IS + D+L Sbjct: 144 KIKVEIINKISPMLEKGRISSIYFDDL 170 >gi|330876025|gb|EGH10174.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. morsprunorum str. M302280PT] Length = 167 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 15/137 (10%), Positives = 32/137 (23%), Gaps = 15/137 (10%) Query: 14 VTLISFYMLFLRSMDTMVE------NHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLV 67 +++ + + L M + + + Q Y V Sbjct: 33 LSVGATWFL----MHKSESAPDPAAAAAAANVKPVAVFEPMTPAFVVNFNANGRQRYMQV 88 Query: 68 KLSF---IVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF--DNLRKKIKEDLN 122 ++ D + + + L L + P I+E Sbjct: 89 SITMLGRNAADMEALKVHMPLIRNNLVMLFAAIPFESLASPIGQEMLRQKATASIQEVAQ 148 Query: 123 SRLGSQFISEVLIDELN 139 LG I ++L Sbjct: 149 KELGKTVIEQLLFTNFV 165 >gi|84514810|ref|ZP_01002173.1| flagellar biosynthesis protein, FliL [Loktanella vestfoldensis SKA53] gi|84510969|gb|EAQ07423.1| flagellar biosynthesis protein, FliL [Loktanella vestfoldensis SKA53] Length = 195 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 20/176 (11%), Positives = 41/176 (23%), Gaps = 42/176 (23%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVP-------------------PLAIKNTN 44 F G+ + L Y LF + +T + Sbjct: 20 FAVVGLVMMGAGLGVGYFLFGTATNTPEQIAAQIIEKNRGAVPEVAEVETEEAADGGPPE 79 Query: 45 IIKSELV---------------SIPSVSNGVLQAYFLVKLSFIVNDSQER--SYLKEIAT 87 + + + ++ + V LS +++ Sbjct: 80 KVSKDSLKSEVFETLYYELPGSLTTNLKDSRRFLQIGVGLSTQYDEAILENVESNLPAIR 139 Query: 88 DYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEVLIDELN 139 + LS D + L +K +N+ L G + VL+ Sbjct: 140 AAILATLSDYGEEDV--VGREARTALSDDLKATINATLEELEGFGGVEGVLLTSFV 193 >gi|330964687|gb|EGH64947.1| flagellar basal body-associated protein FliL [Pseudomonas syringae pv. actinidiae str. M302091] Length = 167 Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 15/137 (10%), Positives = 32/137 (23%), Gaps = 15/137 (10%) Query: 14 VTLISFYMLFLRSMDTMVE------NHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLV 67 +++ + + L M + + + Q Y V Sbjct: 33 LSVGATWFL----MHKSESAPDPAAAAAAANVKPVAVFEPMTPAFVVNFNANGRQRYMQV 88 Query: 68 KLSF---IVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF--DNLRKKIKEDLN 122 ++ D + + + L L + P I+E Sbjct: 89 SITMLGRNAADMEALKAHMPLIRNNLVMLFAAIPFESLASPIGQEMLRQKATASIQEVAQ 148 Query: 123 SRLGSQFISEVLIDELN 139 LG I ++L Sbjct: 149 KELGKTVIEQLLFTNFV 165 >gi|78355432|ref|YP_386881.1| flagellar basal body-associated protein [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78217837|gb|ABB37186.1| flagellar basal body-associated protein, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 250 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 4/59 (6%) Query: 85 IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSI 143 + D ++ L + + + L+ + +N L + + ++LI+ NYL Sbjct: 196 VLRDAIFYYLRNKSLLFL--TEKTNVETLKSDLLAVINQYLDNGQLQDLLIE--NYLVK 250 >gi|168180925|ref|ZP_02615589.1| flagellar basal body-associated protein FliL [Clostridium botulinum NCTC 2916] gi|182668210|gb|EDT80189.1| flagellar basal body-associated protein FliL [Clostridium botulinum NCTC 2916] Length = 173 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 20/147 (13%), Positives = 48/147 (32%), Gaps = 26/147 (17%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVS--------------------IP 54 +F L + + N + + N N+I S+ + + Sbjct: 27 GAGAFGGYMLFAKNKKGANSANQMPVNNNNVINSQQTNNGMYPQQVVVSSKTYSLDEFLV 86 Query: 55 SVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFD 111 ++++ + + K+ + + L+ I D + +L D D Sbjct: 87 NLADEDGKRFVKAKIFIGYEEKKLAKELETKKPILRDAVIGVLRSKKAADI---NPKNID 143 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDEL 138 ++ +I ++ L IS + D+L Sbjct: 144 KIKVEIINKISPMLEKGRISSIYFDDL 170 >gi|188534126|ref|YP_001907923.1| flagellar basal body-associated protein FliL [Erwinia tasmaniensis Et1/99] gi|188029168|emb|CAO97040.1| Flagellar fliL protein [Erwinia tasmaniensis Et1/99] Length = 160 Score = 40.0 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 15/145 (10%), Positives = 35/145 (24%), Gaps = 9/145 (6%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENH---VPPLAIKNTNIIKSELVSIPSVSNG 59 K L + I + + + + ++ ++ Sbjct: 13 KLLILMVVIVALIGCGVAGYTVWKRMKAPADPTAVAKHQPPAIPVFFALDTFTVNLINPD 72 Query: 60 VL-QAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFV--QIKAFGFDNL 113 V + + D + R + L LLS K + Sbjct: 73 NDPDRVLYVGFTLRLPDEETRRRMSDYLPEIRSRLLLLLSRQTAASLASEHGKEQLVTQI 132 Query: 114 RKKIKEDLNSRLGSQFISEVLIDEL 138 ++ + L Q +++VL Sbjct: 133 KQTLAPQLVQGQPQQAVTDVLFTAF 157 >gi|330719578|gb|EGG98163.1| ABC transporter2C ATP-binding protein [gamma proteobacterium IMCC2047] Length = 142 Score = 40.0 bits (92), Expect = 0.14, Method: Composition-based stats. Identities = 12/118 (10%), Positives = 35/118 (29%), Gaps = 11/118 (9%) Query: 30 MVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV-NDSQERSYLK--EIA 86 + ++++ + + + + +Y ++S V + + Sbjct: 23 AEDEDADAESLEDVRYLDIKPAVVTNYGGVGRMSYIKAEVSLQVGSQEDFQKVFHHFPSL 82 Query: 87 TDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL------GSQFISEVLIDEL 138 L LL + LR+++ + + + G+ I +VL Sbjct: 83 RHSLVMLLGQQTDATIAAGAPR--EALRQQVLAQMRAIMEEEEEGGADMIDDVLFSAF 138 >gi|170021345|ref|YP_001726299.1| flagellar basal body-associated protein FliL [Escherichia coli ATCC 8739] gi|188494121|ref|ZP_03001391.1| flagellar basal body-associated protein FliL [Escherichia coli 53638] gi|256020243|ref|ZP_05434108.1| flagellar basal body-associated protein FliL [Shigella sp. D9] gi|260853481|ref|YP_003227372.1| putative lateral flagellar biogenesis protein [Escherichia coli O26:H11 str. 11368] gi|260866427|ref|YP_003232829.1| putative lateral flagellar biogenesis protein [Escherichia coli O111:H- str. 11128] gi|300817254|ref|ZP_07097472.1| flagellar basal body-associated protein FliL [Escherichia coli MS 107-1] gi|300936143|ref|ZP_07151082.1| flagellar basal body-associated protein FliL [Escherichia coli MS 21-1] gi|301643536|ref|ZP_07243579.1| flagellar basal body-associated protein FliL [Escherichia coli MS 146-1] gi|307136892|ref|ZP_07496248.1| putative lateral flagellar biogenesis protein [Escherichia coli H736] gi|307313504|ref|ZP_07593125.1| flagellar basal body-associated protein FliL [Escherichia coli W] gi|331640756|ref|ZP_08341891.1| flagellar basal body-associated protein FliL [Escherichia coli H736] gi|331666561|ref|ZP_08367435.1| flagellar basal body-associated protein FliL [Escherichia coli TA271] gi|332281405|ref|ZP_08393818.1| lateral flagellar associated protein [Shigella sp. D9] gi|59889797|emb|CAH19153.1| Lateral flagellar associated protein (FliL-like) [Escherichia coli] gi|169756273|gb|ACA78972.1| flagellar basal body-associated protein FliL [Escherichia coli ATCC 8739] gi|188489320|gb|EDU64423.1| flagellar basal body-associated protein FliL [Escherichia coli 53638] gi|257752130|dbj|BAI23632.1| predicted lateral flagellar biogenesis protein [Escherichia coli O26:H11 str. 11368] gi|257762783|dbj|BAI34278.1| predicted lateral flagellar biogenesis protein [Escherichia coli O111:H- str. 11128] gi|284920061|emb|CBG33118.1| lateral flagellar associated protein (FliL-like) [Escherichia coli 042] gi|300458721|gb|EFK22214.1| flagellar basal body-associated protein FliL [Escherichia coli MS 21-1] gi|300530230|gb|EFK51292.1| flagellar basal body-associated protein FliL [Escherichia coli MS 107-1] gi|301078087|gb|EFK92893.1| flagellar basal body-associated protein FliL [Escherichia coli MS 146-1] gi|306906672|gb|EFN37183.1| flagellar basal body-associated protein FliL [Escherichia coli W] gi|315059557|gb|ADT73884.1| conserved protein [Escherichia coli W] gi|315616810|gb|EFU97427.1| flagellar basal body-associated FliL family protein [Escherichia coli 3431] gi|323158088|gb|EFZ44187.1| flagellar basal body-associated FliL family protein [Escherichia coli EPECa14] gi|323171081|gb|EFZ56730.1| flagellar basal body-associated protein FliL family protein [Escherichia coli LT-68] gi|323178477|gb|EFZ64055.1| flagellar basal body-associated protein FliL family protein [Escherichia coli 1180] gi|323181562|gb|EFZ66982.1| flagellar basal body-associated protein FliL family protein [Escherichia coli 1357] gi|323379884|gb|ADX52152.1| flagellar basal body-associated protein FliL [Escherichia coli KO11] gi|331037554|gb|EGI09774.1| flagellar basal body-associated protein FliL [Escherichia coli H736] gi|331065785|gb|EGI37669.1| flagellar basal body-associated protein FliL [Escherichia coli TA271] gi|332103757|gb|EGJ07103.1| lateral flagellar associated protein [Shigella sp. D9] Length = 155 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 47/154 (30%), Gaps = 14/154 (9%) Query: 1 MLKFLFSG----IWISVVTLISF------YMLFLRSMDTMVENHVPPLAIKNTNIIKSEL 50 M K + +G + VV + Y + V L + + Sbjct: 1 MKKIVVAGVVSAVLALVVGAGAGWGVWHHYAGKGKPTAAAQTETVETLDESKSVFVTLPE 60 Query: 51 VSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKA 107 + N Y +L +V +E + + + L+ D +K Sbjct: 61 TIVTLHDNNGADHYLSAELVMVVASDKEAEKIKHQEPLYQSIAVECLTEMKFEDLRGMKI 120 Query: 108 FGFDNL-RKKIKEDLNSRLGSQFISEVLIDELNY 140 L +K+DL R S ++L+ ++ + Sbjct: 121 SAIRKLISDALKKDLQRRKMSAPYKDLLVKKVVF 154 >gi|332995168|gb|AEF05223.1| flagellar basal body-associated protein FliL-like protein [Alteromonas sp. SN2] Length = 137 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 11/129 (8%), Positives = 32/129 (24%), Gaps = 10/129 (7%) Query: 18 SFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ-AYFLVKLSFIVNDS 76 + +L + A + + + Y V + ++ D Sbjct: 11 ATALLVSSAFAPAFAQDKANFAYLGLE----PDIVTNYIGESSKKLGYVRVTVELMIYDV 66 Query: 77 Q---ERSYLKEIATDYLYTLLSGPPMGDFVQI-KAFGFD-NLRKKIKEDLNSRLGSQFIS 131 + + + P + + K +++ + G + I Sbjct: 67 DQLEIAEHHMPLLRATAIDIFGRQPEEKVKSLTGREDIRRAILKALQDHMKKETGGEVIK 126 Query: 132 EVLIDELNY 140 V+ + Y Sbjct: 127 NVIFTKYLY 135 >gi|71278773|ref|YP_266892.1| flagellar basal body-associated protein FliL-like protein [Colwellia psychrerythraea 34H] gi|71144513|gb|AAZ24986.1| putative flagellar protein FliL [Colwellia psychrerythraea 34H] Length = 129 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 14/108 (12%), Positives = 34/108 (31%), Gaps = 5/108 (4%) Query: 36 PPLAIKNTNIIKSELVSIPS-VSNGVLQAYFLVKLSFIV--NDSQERSYLKEIATDYLYT 92 + E + + V+ Y + + +V ++ + + D + Sbjct: 19 AQAKASDYAYFGFEPDIVTNYVAVKKKMGYVRLTVELMVEGDNLTIVEHHSPLLRDAIIN 78 Query: 93 LLSGPPMGDFVQIKAFGFDNL--RKKIKEDLNSRLGSQFISEVLIDEL 138 ++ IK L +++KE L G I ++L + Sbjct: 79 IIGQQSEAKVKSIKGRAEIQLACEEQVKELLIKETGEPLIKKLLFTQW 126 >gi|261341478|ref|ZP_05969336.1| putative flagellar biogenesis protein [Enterobacter cancerogenus ATCC 35316] gi|288316274|gb|EFC55212.1| putative flagellar biogenesis protein [Enterobacter cancerogenus ATCC 35316] Length = 156 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 20/126 (15%), Positives = 40/126 (31%), Gaps = 8/126 (6%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENH--VPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 L + + +V+T++ ++L ++ + V + S G + Sbjct: 14 LIAATFAAVLTVVGTHLLSQDEHKRSAITSLFTSSDDESVVEFVEIKNVVVTLKSRGDSE 73 Query: 63 AYFLVKLSFI---VNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 Y L++L+ D+ L LLS A + LR K+ Sbjct: 74 RYLLLELALTTGSAADTHRAEELSPAIRGATVNLLSAMDYDTVR---AMSVEVLRDKLMN 130 Query: 120 DLNSRL 125 + R Sbjct: 131 AYSERF 136 >gi|168182733|ref|ZP_02617397.1| flagellar basal body-associated protein FliL [Clostridium botulinum Bf] gi|237796090|ref|YP_002863642.1| flagellar basal body-associated protein FliL [Clostridium botulinum Ba4 str. 657] gi|182674183|gb|EDT86144.1| flagellar basal body-associated protein FliL [Clostridium botulinum Bf] gi|229262941|gb|ACQ53974.1| flagellar basal body-associated protein FliL [Clostridium botulinum Ba4 str. 657] Length = 173 Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 21/147 (14%), Positives = 49/147 (33%), Gaps = 26/147 (17%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVS--------------------IP 54 +F L + + N + + NTN+I S+ + + Sbjct: 27 GAGAFGGYMLFAKNKKGANSTNQMPVNNTNVINSQQTNDGMYPQQVIVSSKTYSLDEFLV 86 Query: 55 SVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQIKAFGFD 111 ++++ + + K+ + + L+ I D + +L D D Sbjct: 87 NLADEDGKRFIKAKIFIGYEEKKLNKELETKKPILRDAVIGVLRSKKAADI---NPKNID 143 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDEL 138 ++ +I ++ L IS + D+L Sbjct: 144 KIKVEIINKISPMLEKGRISSIYFDDL 170 >gi|258590921|emb|CBE67216.1| putative TonB-dependent receptor [NC10 bacterium 'Dutch sediment'] Length = 725 Score = 39.7 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 11/97 (11%), Positives = 31/97 (31%), Gaps = 9/97 (9%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 + + + +W+ ++ I + + P + ++ + V + G ++ Sbjct: 13 RIIIAVVWLVIIGAIGRFAAVAWG-----ADADSPPPTISEEAVRLDPVVVS---AGRIE 64 Query: 63 AYFL-VKLSFIVNDSQERSYLKEIATDYLYTLLSGPP 98 V + V +E + D L + G Sbjct: 65 QRLRDVPANVTVITREEIAQSPARTVDDLLRQIPGFS 101 >gi|213963736|ref|ZP_03391986.1| conserved hypothetical protein [Capnocytophaga sputigena Capno] gi|213953616|gb|EEB64948.1| conserved hypothetical protein [Capnocytophaga sputigena Capno] Length = 546 Score = 39.7 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 21/148 (14%), Positives = 45/148 (30%), Gaps = 15/148 (10%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIP--SVSNGVL 61 ++ GI ++T + Y R E L I + + + + Sbjct: 150 WIVLGIVALLLTAAASYFFVFRKKKLSAEEERKKLPPFERAIQDLKDLQNSKYLIESQHK 209 Query: 62 QAYFLVK-LSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 Y + + + + KE TD L ++ + + A NL++ ++ Sbjct: 210 AYYTRLTDIVKEYLEDEVHILAKESTTDELLAKINDLQQNGKLHLSAETISNLKRVLQNA 269 Query: 121 ------------LNSRLGSQFISEVLID 136 N+ + I V+I Sbjct: 270 DLVKFAKSKPSDSNAEYDRETIENVVIK 297 >gi|150021177|ref|YP_001306531.1| flagellar basal body-associated protein FliL [Thermosipho melanesiensis BI429] gi|149793698|gb|ABR31146.1| flagellar basal body-associated protein FliL [Thermosipho melanesiensis BI429] Length = 173 Score = 39.7 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 22/146 (15%), Positives = 43/146 (29%), Gaps = 15/146 (10%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNT---NIIKSELVSIPSVSN 58 + L + V++ L + ++ A +I+ + Sbjct: 22 MPILIPLVVSLAVSVGVVMFLGNNTQPQTKQSEQATTAAAIPIKAVVIQPGTYQTFMLKG 81 Query: 59 GVLQAYFLVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 G A + LSF V Q + + D L + + L+K Sbjct: 82 GKEVA-VIDSLSFKVGSDQCRSLIAEKNDEIMDALMLIFLSKERTEINTPAGIEL--LKK 138 Query: 116 KIKEDLNSRLG------SQFISEVLI 135 +IK +N G Q + +V + Sbjct: 139 QIKNAVNEITGFVGEKEKQGVIDVYL 164 >gi|289209496|ref|YP_003461562.1| flagellar basal body-associated protein FliL [Thioalkalivibrio sp. K90mix] gi|288945127|gb|ADC72826.1| flagellar basal body-associated protein FliL [Thioalkalivibrio sp. K90mix] Length = 132 Score = 39.7 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 18/101 (17%), Positives = 34/101 (33%), Gaps = 10/101 (9%) Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFI---VNDSQERSYLKEIATDYLYTLLSGPPMGD 101 + E V + + Y K+ + D++E D L +L G Sbjct: 32 YVTLEPVVVNM-ESSDRARYLQAKIQLEAAEMEDAREIRGHIPAVRDRLIRILGGRSPDS 90 Query: 102 FVQIKAFGFDNLRKKIKEDLNSR----LGSQFISEVLIDEL 138 A ++LR++ E+LN G+ I + + Sbjct: 91 LRGSAAR--EDLRQEAMEELNELLEELTGAPRIEALYFSDF 129 >gi|315635629|ref|ZP_07890892.1| flagellar basal body-associated protein [Arcobacter butzleri JV22] gi|315479926|gb|EFU70596.1| flagellar basal body-associated protein [Arcobacter butzleri JV22] Length = 175 Score = 39.7 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 15/144 (10%), Positives = 40/144 (27%), Gaps = 20/144 (13%) Query: 14 VTLISFYMLF---------LRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAY 64 Y L + + ++ P + T + + + + Sbjct: 32 AVAGGTYFLLDKISSTANNGQKTEETAQSSTPANTSEATFKADVNDLVLNLTDSRGKEKV 91 Query: 65 FLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDL 121 + S ND K TD + + +S + + + L+ ++ ++ Sbjct: 92 MKLSFSIRSNDPLIATVIEEYKAEITDVVISQVSSRSSEELLTVGGKNL--LKDELIAEI 149 Query: 122 NSRL------GSQFISEVLIDELN 139 N+ + +S +L Sbjct: 150 NNVINYVTKSNRNVVSTILFTTFV 173 >gi|218703542|ref|YP_002411061.1| lateral flagellar associated FliL-like protein [Escherichia coli UMN026] gi|293403373|ref|ZP_06647464.1| predicted protein [Escherichia coli FVEC1412] gi|298378985|ref|ZP_06988866.1| flagellar FliL protein [Escherichia coli FVEC1302] gi|300899470|ref|ZP_07117718.1| flagellar basal body-associated protein FliL [Escherichia coli MS 198-1] gi|218430639|emb|CAR11505.1| Lateral flagellar associated protein (FliL-like) [Escherichia coli UMN026] gi|291429226|gb|EFF02246.1| predicted protein [Escherichia coli FVEC1412] gi|298280098|gb|EFI21602.1| flagellar FliL protein [Escherichia coli FVEC1302] gi|300356949|gb|EFJ72819.1| flagellar basal body-associated protein FliL [Escherichia coli MS 198-1] Length = 155 Score = 39.7 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 47/154 (30%), Gaps = 14/154 (9%) Query: 1 MLKFLFSG----IWISVVTLISF------YMLFLRSMDTMVENHVPPLAIKNTNIIKSEL 50 M K + +G + VV + Y + V L + + Sbjct: 1 MKKIVVAGVVSAVLALVVGAGAGWGVWHHYAGKGKPTAVARAETVETLDESKSVFVTLPE 60 Query: 51 VSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKA 107 + N Y +L +V +E + + + L+ D +K Sbjct: 61 TIVTLHDNNGADHYLSAELVMVVASDKEAEKIKHQEPLYQSIAVECLTEMKFEDLRGMKI 120 Query: 108 FGFDNL-RKKIKEDLNSRLGSQFISEVLIDELNY 140 L +K+DL R S ++L+ ++ + Sbjct: 121 SAIRKLISDALKKDLQRRKMSAPYKDLLVKKVVF 154 >gi|83858804|ref|ZP_00952326.1| hypothetical protein OA2633_04856 [Oceanicaulis alexandrii HTCC2633] gi|83853627|gb|EAP91479.1| hypothetical protein OA2633_04856 [Oceanicaulis alexandrii HTCC2633] Length = 198 Score = 39.7 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 16/167 (9%), Positives = 39/167 (23%), Gaps = 30/167 (17%) Query: 1 MLKFL--FSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN-------------- 44 M+ F+ + I + + L + E + + Sbjct: 31 MILFIGLPVILVILAGVAGALFFLGGGDEEAAAEGEHGEAHGEASADGHGDGHGGGDGHE 90 Query: 45 -------IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKE-----IATDYLYT 92 E + + V+++ +D + L + D Sbjct: 91 APHLAELFQFEEPLIVDMSGPDNRSVLLEVRIALAFSDPEVGEMLHREDVQMLLRDEYVE 150 Query: 93 LLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + D +R ++ N L + + VL+ Sbjct: 151 FFRALRVEDIDGSTGS--HRIRMELIRRTNLVLAPKTVDGVLLPSFV 195 >gi|157963958|ref|YP_001503992.1| flagellar basal body-associated protein FliL-like protein [Shewanella pealeana ATCC 700345] gi|157848958|gb|ABV89457.1| flagellar basal body-associated protein FliL [Shewanella pealeana ATCC 700345] Length = 133 Score = 39.7 bits (91), Expect = 0.19, Method: Composition-based stats. Identities = 13/115 (11%), Positives = 34/115 (29%), Gaps = 10/115 (8%) Query: 34 HVPPLAIKNTNIIKSELVSIPS-VSNGVLQAYFLVKLSFIVNDSQ---ERSYLKEIATDY 89 ++ E + + +SN Y + + +V + + Sbjct: 20 AADNKPLEEYAYYGFEPEIVTNYISNRKKLGYVRLSVELMVKKPEQLVSLERHDPLLRAA 79 Query: 90 LYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEVLIDELNY 140 + +L + + +R++ E +N L G + +L + Y Sbjct: 80 IVEILGNQTEDKVKSLTGK--EEIRRQCYEKVNQLLEQETGEPLVVNLLFTKYLY 132 >gi|288962681|ref|YP_003452975.1| hypothetical protein AZL_e00860 [Azospirillum sp. B510] gi|288914947|dbj|BAI76431.1| hypothetical protein AZL_e00860 [Azospirillum sp. B510] Length = 161 Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 21/146 (14%), Positives = 42/146 (28%), Gaps = 13/146 (8%) Query: 18 SFYMLFLRSMDT----MVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFI- 72 Y L + A +++ + +P + G A+ L +++ Sbjct: 17 GGYGLGRFEAPQEASAAASSDSTGAASGGPYYVEAGQLVVPMLERGRTIAFILTQITLEA 76 Query: 73 --VNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----G 126 +D+ A + L A + + N G Sbjct: 77 SNADDALLVRRRLPHARSAMLEALFDLAGHGRFSGPAVDPQGVATALLTGANGSFTGRDG 136 Query: 127 SQFISEVLIDELNYLSIVDMRSNCLR 152 ++ + VLID L L + R + R Sbjct: 137 ARPVRAVLIDRL--LRQDNTRQDNTR 160 >gi|219684687|ref|ZP_03539630.1| flagellar basal body-associated protein FliL [Borrelia garinii PBr] gi|219685745|ref|ZP_03540556.1| flagellar basal body-associated protein FliL [Borrelia garinii Far04] gi|219672049|gb|EED29103.1| flagellar basal body-associated protein FliL [Borrelia garinii PBr] gi|219672684|gb|EED29712.1| flagellar basal body-associated protein FliL [Borrelia garinii Far04] Length = 178 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 49/151 (32%), Gaps = 20/151 (13%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 L+ L GI+ + +I Y + + + + + + I S + Sbjct: 31 LQILAIGIFTVAIMIIVSYFVSKMVVSQSGAP--SDFPVFSNEYLGKPPMLIWYESIDEI 88 Query: 62 QA----------YFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAF 108 + + L + N+ + L K D + S + Sbjct: 89 RGNTLDVPPKTFVVKLALGYAENNVNILNELGRQKVRLKDIIREYFSQRTGQEIKNES-- 146 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ +IK +NS L + I E+ + +++ Sbjct: 147 ---QIKAEIKARINSILRNGEIKEIALTQID 174 >gi|224532065|ref|ZP_03672697.1| flagellar basal body-associated protein FliL [Borrelia valaisiana VS116] gi|224511530|gb|EEF81936.1| flagellar basal body-associated protein FliL [Borrelia valaisiana VS116] Length = 178 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 49/151 (32%), Gaps = 20/151 (13%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 L+ L GI+ + +I Y + + + + + + I S + Sbjct: 31 LQILAIGIFTVAIMIIVSYFVSKMVVSQSGAP--SDFPVFSNEYLGKPPMLIWYESIDEI 88 Query: 62 QA----------YFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAF 108 + + L + N+ + L K D + S + Sbjct: 89 RGNTLDVPPKTFVVKLALGYAENNVNILNELGRQKVRLKDIIREYFSQRTGQEIKNES-- 146 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ +IK +NS L + I E+ + +++ Sbjct: 147 ---QIKAEIKARINSILRNGEIKEIALTQID 174 >gi|88858447|ref|ZP_01133089.1| flagellar basal body-associated protein [Pseudoalteromonas tunicata D2] gi|88820064|gb|EAR29877.1| flagellar basal body-associated protein [Pseudoalteromonas tunicata D2] Length = 131 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 13/100 (13%), Positives = 37/100 (37%), Gaps = 5/100 (5%) Query: 47 KSELVSIPSVSNGVLQAYFLVKLSFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFV 103 + ++++ ++ Y V + ++ D + + D + +LS P Sbjct: 32 EPDVITNYIGASNKKMGYVRVTVELMLQDMANLAVVEHHDPLLRDAIVEILSKEPEDKIK 91 Query: 104 QIKAFGFDNLR--KKIKEDLNSRLGSQFISEVLIDELNYL 141 + + + +K+ L G++ I ++L + Y Sbjct: 92 SLTGREEIRKKCVEAVKKLLKEETGNEIIRDILFTKYLYH 131 >gi|226225728|ref|YP_002759834.1| flagellar FliL protein [Gemmatimonas aurantiaca T-27] gi|226088919|dbj|BAH37364.1| flagellar FliL protein [Gemmatimonas aurantiaca T-27] Length = 189 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 9/86 (10%), Positives = 27/86 (31%), Gaps = 5/86 (5%) Query: 57 SNGVLQAYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNL 113 + + L+ ++ + K D + T L + + I Sbjct: 104 AGSGGSRFLLLSVAIEAGKATALEQFKARDAELRDIILTALGTKTVDELTDISKREI--F 161 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELN 139 + +++ ++ R G Q + + + Sbjct: 162 KTELQAAVDGRFGKQTVKRLYFPQFV 187 >gi|262276389|ref|ZP_06054198.1| flagellar biosynthesis protein FliL [Grimontia hollisae CIP 101886] gi|262220197|gb|EEY71513.1| flagellar biosynthesis protein FliL [Grimontia hollisae CIP 101886] Length = 164 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 10/123 (8%), Positives = 34/123 (27%), Gaps = 12/123 (9%) Query: 25 RSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV-----NDSQER 79 + D +V P++++ + + +V+ Q ++ + + Sbjct: 44 AAQDDIVLEEPEPVSLQAI-YVTLPQPFVFNVTGDSQQRLV--QVKVQLMVRGDQNETLA 100 Query: 80 SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK---IKEDLNSRLGSQFISEVLID 136 + L T + + + ++ ++ + G + VL Sbjct: 101 KQNLPLVEHSLLTTFGAATVEQLRTPQG-QVEVRKQAVDTVQAAMEKITGKPVVERVLFT 159 Query: 137 ELN 139 Sbjct: 160 GFV 162 >gi|296135697|ref|YP_003642939.1| flagellar basal body-associated protein FliL [Thiomonas intermedia K12] gi|295795819|gb|ADG30609.1| flagellar basal body-associated protein FliL [Thiomonas intermedia K12] Length = 189 Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 30/120 (25%), Gaps = 11/120 (9%) Query: 15 TLISF---YMLFL---RSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVK 68 + L + KN I E S Y VK Sbjct: 30 MAGGGAAAFFLMKPKAAPTAAELAAEAAAEKAKNMRFISMEPFVTNLQSTDGTVHYLQVK 89 Query: 69 LSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL 125 + D + + + +L+ + ++ +LR+ I +N L Sbjct: 90 IDLKTYDPSVEGKVKLMTPELRNNILRILAAQSIDKVDSVEGRD--HLREDILHSVNKVL 147 >gi|16760919|ref|NP_456536.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Typhi str. CT18] gi|29141389|ref|NP_804731.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] gi|213053038|ref|ZP_03345916.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Typhi str. E00-7866] gi|213419858|ref|ZP_03352924.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Typhi str. E01-6750] gi|213584775|ref|ZP_03366601.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Typhi str. E98-0664] gi|213615590|ref|ZP_03371416.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Typhi str. E98-2068] gi|213646781|ref|ZP_03376834.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Typhi str. J185] gi|213855272|ref|ZP_03383512.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Typhi str. M223] gi|289829467|ref|ZP_06547079.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Typhi str. E98-3139] gi|25298894|pir||AH0752 FliL protein [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) gi|16503216|emb|CAD05723.1| FliL protein [Salmonella enterica subsp. enterica serovar Typhi] gi|29137016|gb|AAO68580.1| FliL protein [Salmonella enterica subsp. enterica serovar Typhi str. Ty2] Length = 155 Score = 39.3 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 15/140 (10%), Positives = 34/140 (24%), Gaps = 6/140 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + L + T Y + P + ++ ++ + Sbjct: 16 IPLLVLITLAACATAGYSYWRMQQ--QPTTNAKAEPAPPPAPVFFVLDTFTV-NLGDADR 72 Query: 62 QAYFLVKLSFI-VNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ--IKAFGFDNLRKKIK 118 Y V L + L L S + K +++ + Sbjct: 73 VLYIGVTLRLKDEATRARLNEYLPEVRSRLLLLFSRQNAAELSTEAGKQKLIAAIKETLA 132 Query: 119 EDLNSRLGSQFISEVLIDEL 138 L + Q +++VL Sbjct: 133 APLVAGQPKQVVTDVLYTAF 152 >gi|195941367|ref|ZP_03086749.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi 80a] gi|224533098|ref|ZP_03673698.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi WI91-23] gi|225549191|ref|ZP_03770166.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi 94a] gi|226320580|ref|ZP_03796140.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi 29805] gi|224511825|gb|EEF82226.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi WI91-23] gi|225370417|gb|EEG99855.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi 94a] gi|226233999|gb|EEH32720.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi 29805] gi|312147822|gb|ADQ30481.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi JD1] Length = 178 Score = 39.3 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 49/151 (32%), Gaps = 20/151 (13%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 L+ L GI+ + +I Y + + + + + + I S + Sbjct: 31 LQILAIGIFTVAIMIIVSYFVSKMVVSQSGAP--SDFPVFSNEYLGKPPMLIWYESIDEI 88 Query: 62 QA----------YFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAF 108 + + L + N+ + L K D + S + Sbjct: 89 RGNTLDVPPKTFVVKLALGYAENNVNILNELGRQKVRLKDIIREYFSQRTGQEIKNES-- 146 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ +IK +NS L + I E+ + +++ Sbjct: 147 ---QIKAEIKARINSILRNGEIKEIALTQID 174 >gi|111115104|ref|YP_709722.1| flagellar basal body-associated protein FliL [Borrelia afzelii PKo] gi|110890378|gb|ABH01546.1| flagellar protein [Borrelia afzelii PKo] Length = 178 Score = 39.3 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 49/151 (32%), Gaps = 20/151 (13%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 L+ L GI+ + +I Y + + + + + + I S + Sbjct: 31 LQILAIGIFTVAIMIIVSYFVSKMVVSQSGAP--SDFPVFSNEYLGKPPMLIWYESIDEI 88 Query: 62 QA----------YFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAF 108 + + L + N+ + L K D + S + Sbjct: 89 RGNTLDVPPKTFVVKLALGYAENNVNILNELGRQKVRLKDIIREYFSQRTGQEIKNES-- 146 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ +IK +NS L + I E+ + +++ Sbjct: 147 ---QIKAEIKARINSILRNGEIKEIALTQID 174 >gi|15594624|ref|NP_212413.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi B31] gi|216264449|ref|ZP_03436441.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi 156a] gi|218249401|ref|YP_002374802.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi ZS7] gi|221217683|ref|ZP_03589151.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi 72a] gi|223888870|ref|ZP_03623461.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi 64b] gi|224533752|ref|ZP_03674340.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi CA-11.2a] gi|225550141|ref|ZP_03771101.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi 118a] gi|225552111|ref|ZP_03773051.1| flagellar basal body-associated protein FliL [Borrelia sp. SV1] gi|226321597|ref|ZP_03797123.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi Bol26] gi|3913686|sp|Q57442|FLIL_BORBU RecName: Full=Flagellar protein FliL gi|1165264|gb|AAA85603.1| orf25; Method: conceptual translation supplied by author [Borrelia burgdorferi] gi|1185055|gb|AAB58964.1| flagellar protein [Borrelia burgdorferi] gi|2688187|gb|AAC66669.1| flagellar protein (fliL) [Borrelia burgdorferi B31] gi|215980922|gb|EEC21729.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi 156a] gi|218164589|gb|ACK74650.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi ZS7] gi|221192360|gb|EEE18579.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi 72a] gi|223885686|gb|EEF56785.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi 64b] gi|224513045|gb|EEF83408.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi CA-11.2a] gi|225369253|gb|EEG98706.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi 118a] gi|225371109|gb|EEH00539.1| flagellar basal body-associated protein FliL [Borrelia sp. SV1] gi|226232786|gb|EEH31539.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi Bol26] gi|312149514|gb|ADQ29585.1| flagellar basal body-associated protein FliL [Borrelia burgdorferi N40] Length = 178 Score = 39.3 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 49/151 (32%), Gaps = 20/151 (13%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 L+ L GI+ + +I Y + + + + + + I S + Sbjct: 31 LQILAIGIFTVAIMIIVSYFVSKMVVSQSGAP--SDFPVFSNEYLGKPPMLIWYESIDEI 88 Query: 62 QA----------YFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAF 108 + + L + N+ + L K D + S + Sbjct: 89 RGNTLDVPPKTFVVKLALGYAENNVNILNELGRQKVRLKDIIREYFSQRTGQEIKNES-- 146 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ +IK +NS L + I E+ + +++ Sbjct: 147 ---QIKAEIKARINSILRNGEIKEIALTQID 174 >gi|330828805|ref|YP_004391757.1| flagellar basal body-associated protein FliL [Aeromonas veronii B565] gi|328803941|gb|AEB49140.1| Flagellar basal body-associated protein FliL [Aeromonas veronii B565] Length = 171 Score = 39.3 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 15/133 (11%), Positives = 33/133 (24%), Gaps = 16/133 (12%) Query: 21 MLFLRSMDTMVENHVPPLAIKNTN-------IIKSELVSIPSVSNGVLQAYFLVKLSFIV 73 L L + + + +V+ +K+ +V Sbjct: 39 FLMLSGSNKPPVEAAEGAEAAPKEEAPKPSLYVGMPRPFVFNVAGAQRDRLVQIKIQLMV 98 Query: 74 ---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR----KKIKEDLNSRLG 126 D + L + S + + + LR ++ + L + Sbjct: 99 RGTADETLAKQNIPLIEGTLLRVFSAASAEQLMTFEGK--EKLRKDSLEECRRVLKDLVS 156 Query: 127 SQFISEVLIDELN 139 S I +VL Sbjct: 157 SPVIEQVLFTGFV 169 >gi|109899346|ref|YP_662601.1| flagellar basal body-associated protein FliL [Pseudoalteromonas atlantica T6c] gi|109701627|gb|ABG41547.1| flagellar basal body-associated protein FliL [Pseudoalteromonas atlantica T6c] Length = 175 Score = 39.3 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 15/143 (10%), Positives = 32/143 (22%), Gaps = 22/143 (15%) Query: 17 ISFYMLF-------------LRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 + Y L M+ + + +V Sbjct: 33 GAAYFLLGGEDEVATMEGEEQAQMEGDGGETSEAVKTGTALYVAIPNPITFNVPGANRDR 92 Query: 64 YFLVKLSFIVNDSQERS---YLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 +K+ +V S L S D + +R ++ Sbjct: 93 LVEIKVQLMVRGSSAEEQVKMHIPSIQGALNRAFSQANADDLITEAGKA--AIRDNALKE 150 Query: 121 LNSRL----GSQFISEVLIDELN 139 + L G++ + +VL Sbjct: 151 VQKTLKDVSGNELVEQVLFTGFV 173 >gi|307718610|ref|YP_003874142.1| flagellar protein [Spirochaeta thermophila DSM 6192] gi|306532335|gb|ADN01869.1| flagellar protein [Spirochaeta thermophila DSM 6192] gi|315186377|gb|EFU20137.1| flagellar basal body-associated protein FliL [Spirochaeta thermophila DSM 6578] Length = 180 Score = 39.3 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 15/120 (12%), Positives = 39/120 (32%), Gaps = 6/120 (5%) Query: 25 RSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK- 83 +S + + A + + + +V L + VND ++ L Sbjct: 62 QSQNPPEISPEYQAAPPVLAWYEIGEIRARTSDEAQYTLLAVVYLGYKVNDKALQTELNE 121 Query: 84 --EIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYL 141 D + S + + +++++K +N L S + +++ D + Sbjct: 122 RRPYLRDLIRRFFSSKRAEELRPQYE---EMIKEELKAKINDVLTSGMVQDIVFDTFTLV 178 >gi|205352331|ref|YP_002226132.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|62128183|gb|AAX65886.1| flagellar biosynthesis [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|205272112|emb|CAR36965.1| FliL protein [Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91] gi|326627381|gb|EGE33724.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Gallinarum str. 9] Length = 175 Score = 39.3 bits (90), Expect = 0.24, Method: Composition-based stats. Identities = 15/140 (10%), Positives = 34/140 (24%), Gaps = 6/140 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + L + T Y + P + ++ ++ + Sbjct: 36 IPLLVLITLAACATAGYSYWRMQQ--QPTTNAKAEPAPPPAPVFFALDTFTV-NLGDADR 92 Query: 62 QAYFLVKLSFI-VNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ--IKAFGFDNLRKKIK 118 Y V L + L L S + K +++ + Sbjct: 93 VLYIGVTLRLKDEATRARLNEYLPEVRSRLLLLFSRQNAAELSTEAGKQKLIAAIKETLA 152 Query: 119 EDLNSRLGSQFISEVLIDEL 138 L + Q +++VL Sbjct: 153 APLVAGQPKQVVTDVLYTAF 172 >gi|163797868|ref|ZP_02191812.1| hypothetical protein BAL199_20090 [alpha proteobacterium BAL199] gi|159176830|gb|EDP61398.1| hypothetical protein BAL199_20090 [alpha proteobacterium BAL199] Length = 161 Score = 39.3 bits (90), Expect = 0.24, Method: Composition-based stats. Identities = 17/123 (13%), Positives = 38/123 (30%), Gaps = 6/123 (4%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER 79 + D + P I + + +N + L+ L+ ++ R Sbjct: 40 HGAVEEKKDLGAPSTSKPSPIGAVTYV-LSEFVVNVRTNRTYPVFLLLSLAVEMSSEAVR 98 Query: 80 SYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLID 136 + + D + LSG D G +R + + + + + + V I Sbjct: 99 PKMVAQEPRIRDAMIVYLSGLTPSDLNGYD--GIQRVRDQSWQIVQKFVDPKDVVNVQIM 156 Query: 137 ELN 139 +L Sbjct: 157 KLT 159 >gi|269836613|ref|YP_003318841.1| flagellar basal body-associated protein FliL [Sphaerobacter thermophilus DSM 20745] gi|269785876|gb|ACZ38019.1| flagellar basal body-associated protein FliL [Sphaerobacter thermophilus DSM 20745] Length = 183 Score = 39.3 bits (90), Expect = 0.25, Method: Composition-based stats. Identities = 18/163 (11%), Positives = 50/163 (30%), Gaps = 32/163 (19%) Query: 7 SGIWISVVTLISFYML-----FLRSMDTMVENHVPPLAIKNTNIIKSELVS-----IPSV 56 G I V + + ++L S+ N L++ + + + ++ Sbjct: 21 VGALIVVALVGAVFVLPSLVPGGISIQLGNGNTTETLSVPPPTGVDVGVPVTLGERVVNL 80 Query: 57 SNGVLQAYFLVKLSF----------IVNDSQER----------SYLKEIATDYLYTLLSG 96 ++ Y ++ ++ + +K D L ++L+ Sbjct: 81 ADPGGFRYLKTEIVLSLHVPGVVGSELSTEELEKEQATLNARLEPIKPQIQDILTSVLTA 140 Query: 97 PPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 + + + LR+++ E L L I+ + + Sbjct: 141 KTVAEVTTPEGKEV--LREQLIESLQPLLRHHQITGLYFAQFV 181 >gi|222100882|ref|YP_002535450.1| Flagellar protein [Thermotoga neapolitana DSM 4359] gi|221573272|gb|ACM24084.1| Flagellar protein [Thermotoga neapolitana DSM 4359] Length = 168 Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 8/128 (6%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKS---ELVSIPSVSNGVL 61 L I I ++ ++ Y L + T I + + G Sbjct: 19 LIMSIVIPLIVSLAVYFLLPMFLGTNQGGQSESTPSTPVEIKAVLIQPGENKTFLLKGGR 78 Query: 62 QAYFLVKLSFIVNDS---QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 + LSF V + ++ D L + + + L+++I+ Sbjct: 79 DVVVIDSLSFTVGSDTCRAAIAEKEDEIMDALMMIFLSKEKSELSTVPGLEL--LKRQIR 136 Query: 119 EDLNSRLG 126 E +N+ G Sbjct: 137 EAVNTITG 144 >gi|294339868|emb|CAZ88231.1| putative Flagellar basal body-associated protein FliL [Thiomonas sp. 3As] Length = 189 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 16/120 (13%), Positives = 31/120 (25%), Gaps = 11/120 (9%) Query: 15 TLISF---YMLFL---RSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVK 68 + L + KN I E S Y VK Sbjct: 30 MAGGGAAAFFLMKPKAAPTAAELAAEAAAEKAKNMRFISMEPFVTNLQSTDGTVHYLQVK 89 Query: 69 LSFIVND---SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL 125 + D + + + + +L+ + ++ +LR+ I +N L Sbjct: 90 IDLKTYDPLVEGKVKLMTPELRNNILRILAAQSIDKVDSVEGRD--HLREDILHSVNKVL 147 >gi|224534280|ref|ZP_03674858.1| flagellar basal body-associated protein FliL [Borrelia spielmanii A14S] gi|224514382|gb|EEF84698.1| flagellar basal body-associated protein FliL [Borrelia spielmanii A14S] Length = 178 Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 23/151 (15%), Positives = 50/151 (33%), Gaps = 20/151 (13%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 L+ L GI+ V+ +I Y + + I + + + I S + Sbjct: 31 LQILAIGIFTVVIMIIVSYFVSKMVVSQSGAP--SDFPIFSNEYLGKPPMLIWYESIDEI 88 Query: 62 QA----------YFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAF 108 + + L + N+ + L K D + S + Sbjct: 89 RGNTLDVPPKTFVVKLALGYAENNVNILNELGRQKVRLKDIIREYFSQRTGQEIKNES-- 146 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ +IK +NS L + I E+ + +++ Sbjct: 147 ---QIKAEIKARINSILRNGEIKEIALTQID 174 >gi|55501819|gb|AAV52770.1| FLHR2 [synthetic construct] Length = 546 Score = 38.9 bits (89), Expect = 0.28, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 10/114 (8%) Query: 36 PPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQ-----ERSYLKEIATDYL 90 PP+ ++N N +E I ++ G + +KL+F + E + E D L Sbjct: 254 PPIPLENYNF--TEEFRIDTLDKGETH-FVKMKLAFGIAKEDQTLSAELAERNEQMRD-L 309 Query: 91 YTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIV 144 L+ G D I + R++IK +N L I EV + L Y+ Sbjct: 310 IKLIVGRKFKD-ELINIEDQLDFREEIKAQVNHILTEGKIQEVRCNNLPYIGAD 362 >gi|91223996|ref|ZP_01259259.1| hypothetical protein V12G01_01895 [Vibrio alginolyticus 12G01] gi|91190907|gb|EAS77173.1| hypothetical protein V12G01_01895 [Vibrio alginolyticus 12G01] Length = 222 Score = 38.9 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 14/93 (15%), Positives = 32/93 (34%), Gaps = 4/93 (4%) Query: 1 MLKFLFSGIWISVVT-LISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59 M K L + I + ++ + Y F D + + S+ + + Sbjct: 1 MKKILVALIVMLLLGGAGAGYYFFFMQKDEPEAPKATQVEQSSLQKETSKPILDLEAAPP 60 Query: 60 VLQAYFLVKLSFIVNDSQERSYLKEIATDYLYT 92 + Y++++ V + + L + D LY Sbjct: 61 EVTEYYVIERRVNVYN---KPNLNALVVDTLYK 90 >gi|332305665|ref|YP_004433516.1| flagellar basal body-associated protein FliL [Glaciecola agarilytica 4H-3-7+YE-5] gi|332172994|gb|AEE22248.1| flagellar basal body-associated protein FliL [Glaciecola agarilytica 4H-3-7+YE-5] Length = 175 Score = 38.9 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 14/144 (9%), Positives = 37/144 (25%), Gaps = 21/144 (14%) Query: 15 TLISFYMLFLRSMDTMVENHV------------PPLAIKNTNIIKSELVSIPSVSNGVLQ 62 + ++++L M P+ + +V Sbjct: 32 SAAAYFLLGGEDDAAMEAGAEQTQGSSDGASMSAPVKTGTALYVAIPNPITFNVPGTTRD 91 Query: 63 AYFLVKLSFIV---NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 +K+ +V + ++ L S D + +R + Sbjct: 92 RLVEIKVQLMVRGSDAEEQVKMHIPSIQGALNRAFSQANADDLITEAGKA--TIRDNALK 149 Query: 120 DLNSRL----GSQFISEVLIDELN 139 ++ L G++ + +VL Sbjct: 150 EVQKTLKDVSGNELVEQVLFTGFV 173 >gi|327254571|gb|EGE66187.1| flagellar basal body-associated protein FliL family protein [Escherichia coli STEC_7v] Length = 155 Score = 38.9 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 47/154 (30%), Gaps = 14/154 (9%) Query: 1 MLKFLFSG----IWISVVTLISF------YMLFLRSMDTMVENHVPPLAIKNTNIIKSEL 50 M K + +G + VV + Y + V L + + Sbjct: 1 MKKIVVAGVVSAVLALVVGAGAGWGVWHHYAGKGKPTAAAQTESVETLDESKSVFVTLPE 60 Query: 51 VSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKA 107 + N Y +L +V +E + + + L+ D +K Sbjct: 61 TIVTLHDNNGADHYLSAELVMVVASDKEAEKIKHQEPLYQSIAVECLTEMKFEDLRGMKI 120 Query: 108 FGFDNL-RKKIKEDLNSRLGSQFISEVLIDELNY 140 L +K+DL R S ++L+ ++ + Sbjct: 121 SAIRKLISDALKQDLQRRKMSAPYKDLLVKKVVF 154 >gi|55501798|gb|AAV52769.1| FLHR1 [synthetic construct] Length = 572 Score = 38.9 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 10/114 (8%) Query: 36 PPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQ-----ERSYLKEIATDYL 90 PP+ ++N N +E I ++ G + +KL+F + E + E D L Sbjct: 280 PPIPLENYNF--TEEFRIDTLDKGETH-FVKMKLAFGIAKEDQTLSAELAERNEQMRD-L 335 Query: 91 YTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIV 144 L+ G D I + R++IK +N L I EV + L Y+ Sbjct: 336 IKLIVGRKFKD-ELINIEDQLDFREEIKAQVNHILTEGKIQEVRCNNLPYIGAD 388 >gi|51598539|ref|YP_072727.1| flagellar basal body-associated protein FliL [Borrelia garinii PBi] gi|51573110|gb|AAU07135.1| flagellar protein [Borrelia garinii PBi] Length = 178 Score = 38.9 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 48/151 (31%), Gaps = 20/151 (13%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 L+ L GI+ +I Y + + + + + + I S + Sbjct: 31 LQILAIGIFTVATMIIVSYFVSKMVVSQSGAP--SDFPVFSNEYLGKPPMLIWYESIDEI 88 Query: 62 QA----------YFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAF 108 + + L + N+ + L K D + S + Sbjct: 89 RGNTLDVPPKTFVVKLALGYAENNVNILNELGRQKVRLKDIIREYFSQRTGQEIKNES-- 146 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ +IK +NS L + I E+ + +++ Sbjct: 147 ---QIKAEIKARINSILRNGEIKEIALTQID 174 >gi|269796386|ref|YP_003315841.1| flagellar basal body-associated protein [Sanguibacter keddieii DSM 10542] gi|269098571|gb|ACZ23007.1| flagellar basal body-associated protein [Sanguibacter keddieii DSM 10542] Length = 161 Score = 38.9 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 22/136 (16%), Positives = 48/136 (35%), Gaps = 13/136 (9%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 F+ GI + + ++Y L + E A + + E +SI ++++G Sbjct: 37 FVIVGIVVVALAAAAYYFLVMGKEAEAAE-----PAPEPGEVFTVEAMSI-NLADG---H 87 Query: 64 YFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNS 123 Y + L + A D L SG + + ++ L+ ++ L+ Sbjct: 88 YLRLGLGLQLTAE-AHELDAAKARDAAIVLFSGKSVEEVSDPESRD--ALKGELAHQLDE 144 Query: 124 RLGSQFISEVLIDELN 139 L + V + + Sbjct: 145 -LYEGEVMGVYLTDFV 159 >gi|224370766|ref|YP_002604930.1| hypothetical protein HRM2_37080 [Desulfobacterium autotrophicum HRM2] gi|223693483|gb|ACN16766.1| hypothetical protein HRM2_37080 [Desulfobacterium autotrophicum HRM2] Length = 484 Score = 38.9 bits (89), Expect = 0.31, Method: Composition-based stats. Identities = 23/164 (14%), Positives = 49/164 (29%), Gaps = 30/164 (18%) Query: 3 KFLFSGIWISVVTLI--SFYMLFLRSMDTMVENHVPPLAIKNTNIIK------------- 47 K + +G+ + +V + Y +F + V +A + Sbjct: 320 KIMVAGLAVCLVLVALPVAYFMFFGEKEPRVIPGPRQVADVPKTVAPEAVSVQGDLPRGD 379 Query: 48 ----------SELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY---LKEIATDYLYTLL 94 E + V Y +S +D++ + + D ++ + Sbjct: 380 DVLSGPGNMVLENFVVLVPGGKVEFVYVTASVSIDYSDARAATEINSHLALYRDIIFEAM 439 Query: 95 SGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 +I +L KIKE LN L +++ +V Sbjct: 440 --DRALASEKIDKVTEADLLDKIKEALNRSLPGRYVEQVQFKVF 481 >gi|317406218|gb|EFV86465.1| flagellar basal body-associated protein FliL [Achromobacter xylosoxidans C54] Length = 195 Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats. Identities = 19/166 (11%), Positives = 44/166 (26%), Gaps = 41/166 (24%) Query: 12 SVVTLISFYMLF-------------------------------LRSMDTMVENHVPPLAI 40 + + + + + + T V P A+ Sbjct: 31 AAASAGATWFIAQRMQPQGGGAPVQLGVGQTGNQPGQPGAAGPQATPTTFVAPPTTPAAV 90 Query: 41 KNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGP 97 + E ++ + N + V L+ V+D Q + +LS Sbjct: 91 PAPIFVPIEAFTVT-LQNADTERIMHVGLTLRVSDEQTRIRLEKYMPEVRSRILMVLSSQ 149 Query: 98 PMGDFVQIKAFGFDNLRKKIKEDLNSRLG----SQFISEVLIDELN 139 + ++ IK+ +N Q++++VL Sbjct: 150 SPTGVQTQQGK--TDMANAIKQAVNRPFAPLPDGQYVTDVLYTAFV 193 >gi|300717237|ref|YP_003742040.1| flagellar basal body protein [Erwinia billingiae Eb661] gi|299063073|emb|CAX60193.1| Flagellar basal body protein [Erwinia billingiae Eb661] Length = 159 Score = 38.9 bits (89), Expect = 0.32, Method: Composition-based stats. Identities = 10/139 (7%), Positives = 40/139 (28%), Gaps = 12/139 (8%) Query: 9 IWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL-QAYFLV 67 + + ++ + + + P + ++ ++ V Sbjct: 21 VTVVACSVAGYMVWHMMKSPADSAKAEKPAVPVAPVFYALDTFTVNLINPDNDPDRVLYV 80 Query: 68 KLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGS 127 + + D R + + + LL D + + + ++++ + + + L Sbjct: 81 GFTLRLPDEDTRRRINDYLPEVRSRLLLLLSRQDASALSS---EQGKQELMKQIKAVLAP 137 Query: 128 Q--------FISEVLIDEL 138 +++VL Sbjct: 138 PLVQGEPQQVVNDVLFTAF 156 >gi|224418944|ref|ZP_03656950.1| flagellar basal body-associated protein FliL [Helicobacter canadensis MIT 98-5491] gi|313142456|ref|ZP_07804649.1| flagellar basal body-protein FliL [Helicobacter canadensis MIT 98-5491] gi|313131487|gb|EFR49104.1| flagellar basal body-protein FliL [Helicobacter canadensis MIT 98-5491] Length = 157 Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats. Identities = 15/141 (10%), Positives = 47/141 (33%), Gaps = 22/141 (15%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKN-----------------T 43 M+ F+ G+ ++ ++ + + S ++ ++ Sbjct: 19 MILFIIIGVVALLLIILIVVGILIFSGGDETQSQDANQPTQSSASKSSVANPNSSLLNVG 78 Query: 44 NIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIA---TDYLYTLLSGPPMG 100 + + + VS G + Y ++ ++ ++ + L D + T+L+ Sbjct: 79 PMYPLDQFIVNLVSTGGGKRYLKTAIALEMSIAEMQPELDTKVNILRDTIITILASKTFE 138 Query: 101 DFVQIKAFGFDNLRKKIKEDL 121 + + L+++I L Sbjct: 139 EIQTTRGK--QKLKEEIIARL 157 >gi|16765313|ref|NP_460928.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56413112|ref|YP_150187.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161613456|ref|YP_001587421.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|162139573|ref|YP_216967.2| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67] gi|167552792|ref|ZP_02346543.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|167993550|ref|ZP_02574644.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|168234148|ref|ZP_02659206.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|168239215|ref|ZP_02664273.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|168244826|ref|ZP_02669758.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|168259738|ref|ZP_02681711.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|168462483|ref|ZP_02696414.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|168823018|ref|ZP_02835018.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|194442590|ref|YP_002041240.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194450316|ref|YP_002046026.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194470139|ref|ZP_03076123.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194736445|ref|YP_002115009.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|197248979|ref|YP_002146048.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197264611|ref|ZP_03164685.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197362038|ref|YP_002141675.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|198243515|ref|YP_002215111.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|200390261|ref|ZP_03216872.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204930992|ref|ZP_03221818.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|207856512|ref|YP_002243163.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224583526|ref|YP_002637324.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|120343|sp|P26417|FLIL_SALTY RecName: Full=Flagellar protein FliL gi|154034|gb|AAA27103.1| fliL flagellar protein [Salmonella enterica subsp. enterica serovar Typhimurium] gi|16420510|gb|AAL20887.1| flagellar biosynthesis [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2] gi|56127369|gb|AAV76875.1| FliL protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] gi|161362820|gb|ABX66588.1| hypothetical protein SPAB_01173 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gi|194401253|gb|ACF61475.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Newport str. SL254] gi|194408620|gb|ACF68839.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Heidelberg str. SL476] gi|194456503|gb|EDX45342.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Kentucky str. CVM29188] gi|194711947|gb|ACF91168.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633] gi|195634549|gb|EDX52901.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Newport str. SL317] gi|197093515|emb|CAR58976.1| FliL protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. AKU_12601] gi|197212682|gb|ACH50079.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Agona str. SL483] gi|197242866|gb|EDY25486.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA23] gi|197288065|gb|EDY27452.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Schwarzengrund str. SL480] gi|197938031|gb|ACH75364.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853] gi|199602706|gb|EDZ01252.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Virchow str. SL491] gi|204320036|gb|EDZ05241.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Javiana str. GA_MM04042433] gi|205322650|gb|EDZ10489.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Saintpaul str. SARA29] gi|205328402|gb|EDZ15166.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar 4,[5],12:i:- str. CVM23701] gi|205331870|gb|EDZ18634.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Kentucky str. CDC 191] gi|205336369|gb|EDZ23133.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Heidelberg str. SL486] gi|205340687|gb|EDZ27451.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Weltevreden str. HI_N05-537] gi|205350735|gb|EDZ37366.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Hadar str. RI_05P066] gi|206708315|emb|CAR32618.1| FliL protein [Salmonella enterica subsp. enterica serovar Enteritidis str. P125109] gi|224468053|gb|ACN45883.1| flagellar biosynthesis protein [Salmonella enterica subsp. enterica serovar Paratyphi C strain RKS4594] gi|261247141|emb|CBG24964.1| FliL protein [Salmonella enterica subsp. enterica serovar Typhimurium str. D23580] gi|267993964|gb|ACY88849.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Typhimurium str. 14028S] gi|301158489|emb|CBW17999.1| flagella biosynthesis protein [Salmonella enterica subsp. enterica serovar Typhimurium str. SL1344] gi|312912965|dbj|BAJ36939.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Typhimurium str. T000240] gi|320085406|emb|CBY95187.1| Flagellar fliL protein [Salmonella enterica subsp. enterica serovar Weltevreden str. 2007-60-3289-1] gi|321224620|gb|EFX49683.1| Flagellar biosynthesis protein FliL [Salmonella enterica subsp. enterica serovar Typhimurium str. TN061786] gi|322715026|gb|EFZ06597.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Choleraesuis str. A50] gi|323130254|gb|ADX17684.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Typhimurium str. 4/74] gi|326622859|gb|EGE29204.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Dublin str. 3246] gi|332988864|gb|AEF07847.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1] Length = 155 Score = 38.5 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 15/140 (10%), Positives = 34/140 (24%), Gaps = 6/140 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + L + T Y + P + ++ ++ + Sbjct: 16 IPLLVLITLAACATAGYSYWRMQQ--QPTTNAKAEPAPPPAPVFFALDTFTV-NLGDADR 72 Query: 62 QAYFLVKLSFI-VNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ--IKAFGFDNLRKKIK 118 Y V L + L L S + K +++ + Sbjct: 73 VLYIGVTLRLKDEATRARLNEYLPEVRSRLLLLFSRQNAAELSTEAGKQKLIAAIKETLA 132 Query: 119 EDLNSRLGSQFISEVLIDEL 138 L + Q +++VL Sbjct: 133 APLVAGQPKQVVTDVLYTAF 152 >gi|206896105|ref|YP_002246695.1| flagellar basal body-associated protein FliL [Coprothermobacter proteolyticus DSM 5265] gi|206738722|gb|ACI17800.1| flagellar basal body-associated protein FliL [Coprothermobacter proteolyticus DSM 5265] Length = 148 Score = 38.5 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 14/128 (10%), Positives = 38/128 (29%), Gaps = 14/128 (10%) Query: 17 ISFYMLFLRSMDTMVEN---HVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIV 73 + L + + +V++ + + + + + + V ++ Sbjct: 16 GAGMALGVYVLAPVVKDMGSNTAAQSKPEPVLQPLGKFTTNLSNPKYI---IQVTVNLEF 72 Query: 74 NDSQER---SYLKE---IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGS 127 D + + + D L DF G ++ + +N+ G Sbjct: 73 YDKKALSEIQKMDPSFLVIQDELLKYFKTLKPEDFS--TDKGLSQIQDNFVKRINNLYGK 130 Query: 128 QFISEVLI 135 +S+VL Sbjct: 131 TVLSDVLF 138 >gi|269966430|ref|ZP_06180515.1| hypothetical protein VMC_19450 [Vibrio alginolyticus 40B] gi|269829017|gb|EEZ83266.1| hypothetical protein VMC_19450 [Vibrio alginolyticus 40B] Length = 222 Score = 38.5 bits (88), Expect = 0.38, Method: Composition-based stats. Identities = 13/93 (13%), Positives = 30/93 (32%), Gaps = 4/93 (4%) Query: 1 MLKFLFSGIWISVVT-LISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59 M K L + I + ++ + Y F D + + S+ + Sbjct: 1 MKKILVALIVMLLLGGAGAGYYFFFMQKDEPEAPKATQVEQSSLQKETSKPILDLEAVPP 60 Query: 60 VLQAYFLVKLSFIVNDSQERSYLKEIATDYLYT 92 + Y++++ V + + + D LY Sbjct: 61 EVTEYYVIERRVNVYN---KPNPNALVVDTLYK 90 >gi|91200228|emb|CAJ73272.1| unknown protein [Candidatus Kuenenia stuttgartiensis] Length = 241 Score = 38.5 bits (88), Expect = 0.38, Method: Composition-based stats. Identities = 25/139 (17%), Positives = 47/139 (33%), Gaps = 6/139 (4%) Query: 3 KFLFSGIWISVVTLISFY-MLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 K L +V + Y LF++ E L+ +N + ++ G Sbjct: 8 KMLMMAGVGMIVLGGAAYWFLFMKGKAPAPEPEAQELSPENIDTSAADT----VGGEGKE 63 Query: 62 QAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDL 121 V S K +++ + +++ K +LR+K+ E L Sbjct: 64 AKNLYASKLPSVYKSNAAKVFKPLSSSEVSKMINEITEEKHEYKKKKELLDLREKMLESL 123 Query: 122 NSRLGSQFIS-EVLIDELN 139 + L + E L +ELN Sbjct: 124 RADLKKERYEIETLREELN 142 >gi|332701292|ref|ZP_08421380.1| flagellar basal body-associated protein FliL [Desulfovibrio africanus str. Walvis Bay] gi|332551441|gb|EGJ48485.1| flagellar basal body-associated protein FliL [Desulfovibrio africanus str. Walvis Bay] Length = 252 Score = 38.5 bits (88), Expect = 0.38, Method: Composition-based stats. Identities = 14/92 (15%), Positives = 30/92 (32%), Gaps = 5/92 (5%) Query: 48 SELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPMGDFVQ 104 E + V + +K +F + +K + D +Y L Sbjct: 158 LEPFWVEKVDAKGQVHFLHLKFAFTSLSPALENEVKIKALLLRDAIYYYLKNKDFEFLAD 217 Query: 105 IKAFGFDNLRKKIKEDLNSRLGSQFISEVLID 136 K + L+ + LN LG+ + + ++ Sbjct: 218 TK--NIEALKADLVSVLNQYLGNDQLDTIYVE 247 >gi|311279114|ref|YP_003941345.1| flagellar basal body-associated protein FliL [Enterobacter cloacae SCF1] gi|308748309|gb|ADO48061.1| flagellar basal body-associated protein FliL [Enterobacter cloacae SCF1] Length = 155 Score = 38.5 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 13/140 (9%), Positives = 32/140 (22%), Gaps = 6/140 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + L + + Y + + ++ ++ + Sbjct: 16 IPLLV--LVTLAACATAGYSYWRMQQQPSASAPKEAPPPPAPVFWALDTFTV-NLGDADR 72 Query: 62 QAYFLVKLSFI-VNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ--IKAFGFDNLRKKIK 118 Y + L + L L S K D ++ + Sbjct: 73 VLYVGITLRLKDEATRTRLNEYLPEVRSRLLLLFSRQDAAQLATDAGKQKLVDAIKATLA 132 Query: 119 EDLNSRLGSQFISEVLIDEL 138 L + Q +++VL Sbjct: 133 PPLVTGQPGQQVTDVLYTAF 152 >gi|114765241|ref|ZP_01444373.1| hypothetical protein 1100011001307_R2601_00390 [Pelagibaca bermudensis HTCC2601] gi|114542376|gb|EAU45404.1| hypothetical protein R2601_00390 [Roseovarius sp. HTCC2601] Length = 219 Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats. Identities = 16/104 (15%), Positives = 38/104 (36%), Gaps = 7/104 (6%) Query: 37 PLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK-----EIATDYLY 91 ++++++ VS+P + Y + ++ + DS+ D + Sbjct: 107 KDPFGDSSVVRLGRVSVPVYRPNSVT-YVVSEVGVAMRDSETAEVFNVAENASRLRDVIL 165 Query: 92 TLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLI 135 + +Q + + L K + DL + G +S+VL Sbjct: 166 ASMHKAAGTSALQGPSIDTEKLTKTLVSDLKADFGEG-VSDVLF 208 >gi|203284200|ref|YP_002221940.1| flagellar protein [Borrelia duttonii Ly] gi|201083643|gb|ACH93234.1| flagellar protein [Borrelia duttonii Ly] Length = 177 Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 51/151 (33%), Gaps = 20/151 (13%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 L+ L G++ V+ +I Y + + + I + + + I S + Sbjct: 30 LQILAIGLFTVVIMIIVSYFVSKMVVSQSGAPN--NFPIFSNEYLGKPPMLIWYESIDEI 87 Query: 62 QA----------YFLVKLSFIVND-SQERSYLKEIAT--DYLYTLLSGPPMGDFVQIKAF 108 + + L + N+ + ++ D + S + Sbjct: 88 RGTTQDTPPKTFVIKLALGYAENNVNILSELGRQKVRLKDIIREYFSQRTGQEIKNES-- 145 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ +IK +NS L + I E+ + +++ Sbjct: 146 ---QIKAEIKARINSILRNGEIKEIALTQID 173 >gi|291617854|ref|YP_003520596.1| FliL [Pantoea ananatis LMG 20103] gi|291152884|gb|ADD77468.1| FliL [Pantoea ananatis LMG 20103] gi|327394271|dbj|BAK11693.1| flagellar FliL protein [Pantoea ananatis AJ13355] Length = 161 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 15/141 (10%), Positives = 35/141 (24%), Gaps = 7/141 (4%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL-Q 62 L + V + + + + E + ++ V+ Sbjct: 19 LLIVALAACSVAGYAVWRMMNKHEGDKPEVAKVEPPPAPV-FFALDTFTVNLVNPDNDPD 77 Query: 63 AYFLVKLSFIVNDSQERSYLKEIA-----TDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 V + + D + R + + L Q K D +++ + Sbjct: 78 RVLYVGFTLRLPDEETRRRMSDYLPEVRSRLLLLLSRQNAAALATEQGKQALVDQIKQAL 137 Query: 118 KEDLNSRLGSQFISEVLIDEL 138 L Q + +VL Sbjct: 138 APPLVKGQPPQVVDDVLFTAF 158 >gi|187918153|ref|YP_001883716.1| flagellar basal body-associated protein FliL [Borrelia hermsii DAH] gi|119861001|gb|AAX16796.1| flagellar protein FliL [Borrelia hermsii DAH] Length = 177 Score = 38.1 bits (87), Expect = 0.44, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 51/151 (33%), Gaps = 20/151 (13%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 L+ L G++ V+ +I Y + + + I + + + I S + Sbjct: 30 LQILAIGLFTVVIMIIVSYFVSKMVVSQSGAPN--NFPIFSNEYLGKPPMLIWYESIDEI 87 Query: 62 QA----------YFLVKLSFIVND-SQERSYLKEIAT--DYLYTLLSGPPMGDFVQIKAF 108 + + L + N+ + ++ D + S + Sbjct: 88 RGTTQDTPPKTFVIKLALGYAENNVNILSELGRQKVRLKDIIREYFSQRTGQEIKNES-- 145 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ +IK +NS L + I E+ + +++ Sbjct: 146 ---QIKAEIKARINSILRNGEIKEIALTQID 173 >gi|161502903|ref|YP_001570015.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. arizonae serovar 62:z4,z23:-- str. RSK2980] gi|160864250|gb|ABX20873.1| hypothetical protein SARI_00962 [Salmonella enterica subsp. arizonae serovar 62:z4,z23:--] Length = 155 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 15/140 (10%), Positives = 34/140 (24%), Gaps = 6/140 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + L + T Y + P + ++ ++ + Sbjct: 16 IPLLVLITLAACATAGYSYWRMQQ--QPTTNAKAEPAPPPAPVFFAMDTFTV-NLGDADR 72 Query: 62 QAYFLVKLSFI-VNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ--IKAFGFDNLRKKIK 118 Y V L + L L S + K +++ + Sbjct: 73 VLYIGVTLRLKDEATRARLNEYLPEVRSRLLLLFSRQNAAELSTQAGKQKLIAAIKETLS 132 Query: 119 EDLNSRLGSQFISEVLIDEL 138 L + Q +++VL Sbjct: 133 APLVAGQPGQVVTDVLYTAF 152 >gi|307824485|ref|ZP_07654710.1| flagellar basal body-associated protein FliL [Methylobacter tundripaludum SV96] gi|307734469|gb|EFO05321.1| flagellar basal body-associated protein FliL [Methylobacter tundripaludum SV96] Length = 167 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 10/134 (7%), Positives = 30/134 (22%), Gaps = 9/134 (6%) Query: 15 TLISFYMLFLRSMDTMVE----NHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLS 70 + L + + A + G + + +S Sbjct: 32 GGGVTFFLMKGDSSKGEKVEHVDEDEAAAHAEKLYFDMSKPIVVDFPKGATVKHGRITVS 91 Query: 71 FIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF--DNLRKKIKEDLNSRL 125 +V ++ + + + L L+ + + + + L Sbjct: 92 ILVEGAETIEVLKKNEPMMRNNLLMLIGAQDPANLNTREGKEMLAKAMLDDVTAVLIKMA 151 Query: 126 GSQFISEVLIDELN 139 G + E+ Sbjct: 152 GKGQVKEIFFTSFV 165 >gi|152980015|ref|YP_001353125.1| flagellar basal body-associated protein FliL [Janthinobacterium sp. Marseille] gi|151280092|gb|ABR88502.1| Flil blagellar basal body-associated protein [Janthinobacterium sp. Marseille] Length = 170 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 16/127 (12%), Positives = 36/127 (28%), Gaps = 10/127 (7%) Query: 20 YMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDS--- 76 Y L ++ + K + E ++ ++ + + + V++ Sbjct: 45 YFLGQKAESHAPKAADAVDLSKPPVFLPMEAFTV-NLQPENGEQFLQTSFTLQVSNQAQL 103 Query: 77 QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL---GSQF-ISE 132 L LLSG + + ++ L ++I G I+ Sbjct: 104 DLIKLYMPHVRSRLLLLLSGKKASEILTVEGKN--KLSEEIIAIFKQPFTPQGPSVTITN 161 Query: 133 VLIDELN 139 VL Sbjct: 162 VLFTSFV 168 >gi|89068712|ref|ZP_01156098.1| flagellar M-ring protein [Oceanicola granulosus HTCC2516] gi|89045675|gb|EAR51737.1| flagellar M-ring protein [Oceanicola granulosus HTCC2516] Length = 169 Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats. Identities = 11/99 (11%), Positives = 30/99 (30%), Gaps = 10/99 (10%) Query: 48 SELVSIPSVSNGV----LQAYFLVKLSFIVNDS----QERSYLKEIATDYLYTLLSGPPM 99 + + + S + V ++ + + + E D L Sbjct: 70 LDEMIVNVTSASASGRLTTRFLKVNVAIVYDPAAPGADELEARTLFLRDTFQDYLRQLSE 129 Query: 100 GDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + + G L+ ++ + +G E+L+ +L Sbjct: 130 TELE--GSLGLHRLKAELLRRARAVVGGDAPQEILVSDL 166 >gi|119953078|ref|YP_945287.1| flagellar basal body-associated protein FliL [Borrelia turicatae 91E135] gi|119861849|gb|AAX17617.1| flagellar protein FliL [Borrelia turicatae 91E135] Length = 177 Score = 38.1 bits (87), Expect = 0.47, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 51/151 (33%), Gaps = 20/151 (13%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 L+ L G++ V+ +I Y + + + I + + + I S + Sbjct: 30 LQILAIGLFTVVIMIIVAYFVSKMVVSQSGAPN--NFPIFSNEYLGKPPMLIWYESIDEI 87 Query: 62 QA----------YFLVKLSFIVND-SQERSYLKEIAT--DYLYTLLSGPPMGDFVQIKAF 108 + + L + N+ + ++ D + S + Sbjct: 88 RGTTQDTPPKTFVIKLALGYAENNVNILSELGRQKVRLKDIIREYFSQRTGQEIKNES-- 145 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ +IK +NS L + I E+ + +++ Sbjct: 146 ---QIKAEIKARINSILRNGEIKEIALTQID 173 >gi|170682924|ref|YP_001742388.1| lateral flagellar basal body-associated protein LafF [Escherichia coli SMS-3-5] gi|170520642|gb|ACB18820.1| lateral flagellar basal body-associated protein LafF [Escherichia coli SMS-3-5] gi|323191387|gb|EFZ76649.1| flagellar basal body-associated protein FliL family protein [Escherichia coli RN587/1] Length = 155 Score = 38.1 bits (87), Expect = 0.48, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 47/154 (30%), Gaps = 14/154 (9%) Query: 1 MLKFLFSG----IWISVVTLISF------YMLFLRSMDTMVENHVPPLAIKNTNIIKSEL 50 M K + +G + VV + Y + V L + + Sbjct: 1 MKKIVVAGVVSAVLALVVGAGAGWGVWHHYAGKGKPTAVARTEAVETLDESKSVFVTLPE 60 Query: 51 VSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKA 107 + N Y +L +V +E + + + L+ D +K Sbjct: 61 TIVTLHDNNGADHYLSAELVMVVASDKEAEKIKHQEPLYQSIAVECLTEMKFEDLRGMKI 120 Query: 108 FGFDNL-RKKIKEDLNSRLGSQFISEVLIDELNY 140 L +K+DL R S ++L+ ++ + Sbjct: 121 SAIRKLISDALKKDLQRRKMSAPYKDLLVKKVVF 154 >gi|153948198|ref|YP_001400445.1| hypothetical protein YpsIP31758_1467 [Yersinia pseudotuberculosis IP 31758] gi|152959693|gb|ABS47154.1| conserved hypothetical protein [Yersinia pseudotuberculosis IP 31758] Length = 397 Score = 38.1 bits (87), Expect = 0.49, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 1/84 (1%) Query: 56 VSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 + + ++ + I+ E + TD + D + + ++ L K Sbjct: 101 LDDYRRESLCEFAIREILKTVDEAIISQPSTTDSFTKKKNKKAYEDIISMVSY-LVGLTK 159 Query: 116 KIKEDLNSRLGSQFISEVLIDELN 139 + R GS I++VL E N Sbjct: 160 DKIQGAKQRYGSDPITQVLFQEFN 183 >gi|322616968|gb|EFY13876.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 315996572] gi|322618207|gb|EFY15099.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-1] gi|322625878|gb|EFY22697.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-3] gi|322626330|gb|EFY23140.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 495297-4] gi|322632745|gb|EFY29490.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-1] gi|322639087|gb|EFY35780.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 515920-2] gi|322640403|gb|EFY37059.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 531954] gi|322647236|gb|EFY43735.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. NC_MB110209-0054] gi|322649916|gb|EFY46337.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. OH_2009072675] gi|322655524|gb|EFY51832.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. CASC_09SCPH15965] gi|322660302|gb|EFY56540.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 19N] gi|322662983|gb|EFY59190.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 81038-01] gi|322668168|gb|EFY64327.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. MD_MDA09249507] gi|322674073|gb|EFY70167.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 414877] gi|322675575|gb|EFY71649.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 366867] gi|322683014|gb|EFY79030.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 413180] gi|322686708|gb|EFY82686.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 446600] gi|323195404|gb|EFZ80584.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 609458-1] gi|323198068|gb|EFZ83185.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 556150-1] gi|323204460|gb|EFZ89466.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 609460] gi|323207550|gb|EFZ92498.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 507440-20] gi|323211011|gb|EFZ95871.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 556152] gi|323217535|gb|EGA02254.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. MB101509-0077] gi|323220732|gb|EGA05176.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. MB102109-0047] gi|323226681|gb|EGA10878.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. MB110209-0055] gi|323231557|gb|EGA15670.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. MB111609-0052] gi|323236000|gb|EGA20079.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 2009083312] gi|323240570|gb|EGA24613.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 2009085258] gi|323245462|gb|EGA29462.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. 315731156] gi|323247580|gb|EGA31531.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2009159199] gi|323253957|gb|EGA37781.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008282] gi|323255515|gb|EGA39276.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008283] gi|323262113|gb|EGA45676.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008284] gi|323266236|gb|EGA49726.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008285] gi|323270655|gb|EGA54096.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Montevideo str. IA_2010008287] Length = 155 Score = 38.1 bits (87), Expect = 0.50, Method: Composition-based stats. Identities = 15/140 (10%), Positives = 34/140 (24%), Gaps = 6/140 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + L + T Y + P + ++ ++ + Sbjct: 16 IPLLVLITLTACATAGYSYWRMQQ--QPTTNAKAEPAPPPAPVFFALDTFTV-NLGDADR 72 Query: 62 QAYFLVKLSFI-VNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ--IKAFGFDNLRKKIK 118 Y V L + L L S + K +++ + Sbjct: 73 VLYIGVTLRLKDEATRARLNEYLPEVRSRLLLLFSRQNAAELSTEAGKQKLIAAIKETLA 132 Query: 119 EDLNSRLGSQFISEVLIDEL 138 L + Q +++VL Sbjct: 133 APLVAGQPKQVVTDVLYTAF 152 >gi|308068663|ref|YP_003870268.1| flagellar basal body-associated protein [Paenibacillus polymyxa E681] gi|305857942|gb|ADM69730.1| Flagellar basal body-associated protein [Paenibacillus polymyxa E681] Length = 157 Score = 38.1 bits (87), Expect = 0.51, Method: Composition-based stats. Identities = 20/152 (13%), Positives = 45/152 (29%), Gaps = 17/152 (11%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMD--------TMVENHVPPLAIKNTNIIKSELVS 52 ML +L + + + + ++L + +++ Sbjct: 4 MLPWLITILLAITLIAGAAFVLIPALSGKKSEVIPNAQAAQAEQLPKLSADELVEVSSEI 63 Query: 53 IPSVSNGVLQAY-FLVKLSFIVNDSQERSYLKEIATD-----YLYTLLSGPPMGDFVQIK 106 +N Y + LSF +ND++ + E D + LL+ + K Sbjct: 64 TGIKTNLADADYIVQMNLSFQLNDAKAKESF-EKIKDISIKPIVIQLLADTKPDELRTAK 122 Query: 107 AFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 K+ + +N L + I + Sbjct: 123 GRD--QFSDKLTDLINKSLPEGHLGNAKITDF 152 >gi|216263894|ref|ZP_03435888.1| flagellar basal body-associated protein FliL [Borrelia afzelii ACA-1] gi|215979938|gb|EEC20760.1| flagellar basal body-associated protein FliL [Borrelia afzelii ACA-1] Length = 178 Score = 38.1 bits (87), Expect = 0.52, Method: Composition-based stats. Identities = 21/151 (13%), Positives = 49/151 (32%), Gaps = 20/151 (13%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 L+ L GI+ + +I Y + + + + + + I S + Sbjct: 31 LQILAIGIFTVAIMIIVSYFVSKMVVSQSGAP--SDFPVFSNEYLGKPPMLIWYESIDEI 88 Query: 62 QA----------YFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAF 108 + + L + N+ + L K D + S + Sbjct: 89 RGNTLDVPPKTFVVKLALGYAENNVNILNELGRQKVRLKDIIREYFSQRTGQEIKNES-- 146 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ +IK +NS L + I E+ + +++ Sbjct: 147 ---QIKVEIKARINSILRNGEIKEIALTQID 174 >gi|306813288|ref|ZP_07447481.1| putative lateral flagellar biogenesis protein [Escherichia coli NC101] gi|305854051|gb|EFM54490.1| putative lateral flagellar biogenesis protein [Escherichia coli NC101] Length = 155 Score = 38.1 bits (87), Expect = 0.54, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 47/154 (30%), Gaps = 14/154 (9%) Query: 1 MLKFLFSG----IWISVVTLISFY-----MLFLRSMDTMVENHV-PPLAIKNTNIIKSEL 50 M K + +G + VV + + T + L + + Sbjct: 1 MKKIVVAGVVSAVLALVVGAGAGWSVWHHYAGKGKPTTAAQTESVEALDESKSVFVTLPE 60 Query: 51 VSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKA 107 + N Y +L +V +E + + + L+ D +K Sbjct: 61 TIVTLHDNNGADHYLSAELVMVVASDKEAEKIKHQEPLYQSIAVECLTEMKFEDLRGMKI 120 Query: 108 FGFDNL-RKKIKEDLNSRLGSQFISEVLIDELNY 140 L +K+DL R S ++L+ ++ + Sbjct: 121 SAIRKLISDALKKDLQRRKMSAPYKDLLVKKVVF 154 >gi|118360918|ref|XP_001013690.1| EF hand family protein [Tetrahymena thermophila] gi|89295457|gb|EAR93445.1| EF hand family protein [Tetrahymena thermophila SB210] Length = 949 Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 15/85 (17%), Positives = 36/85 (42%), Gaps = 3/85 (3%) Query: 54 PSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113 P +S+ LQ ++ +D++ L + + + LL+ + D+ Q Sbjct: 326 PEISSPELQRKLRKQIQVE-DDTRNEKKLNFVLKNKITQLLNNFWINDYKQTGVINQKTF 384 Query: 114 RKKIKEDLNSRLGSQFISEVLIDEL 138 ++ I+ ++ L IS+ I ++ Sbjct: 385 KEIIRRKVD--LSENVISDQEIQQI 407 >gi|108808029|ref|YP_651945.1| hypothetical protein YPA_2034 [Yersinia pestis Antiqua] gi|108812299|ref|YP_648066.1| hypothetical protein YPN_2137 [Yersinia pestis Nepal516] gi|145599232|ref|YP_001163308.1| hypothetical protein YPDSF_1952 [Yersinia pestis Pestoides F] gi|149365552|ref|ZP_01887587.1| hypothetical protein YPE_0720 [Yersinia pestis CA88-4125] gi|162420411|ref|YP_001606292.1| hypothetical protein YpAngola_A1803 [Yersinia pestis Angola] gi|165925575|ref|ZP_02221407.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165937733|ref|ZP_02226295.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. IP275] gi|166008656|ref|ZP_02229554.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166213840|ref|ZP_02239875.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. B42003004] gi|167399224|ref|ZP_02304748.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167422256|ref|ZP_02314009.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167424452|ref|ZP_02316205.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|167468607|ref|ZP_02333311.1| hypothetical protein YpesF_12069 [Yersinia pestis FV-1] gi|218929628|ref|YP_002347503.1| hypothetical protein YPO2542 [Yersinia pestis CO92] gi|229838084|ref|ZP_04458243.1| hypothetical protein YPH_0310 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229895283|ref|ZP_04510457.1| hypothetical protein YPS_3068 [Yersinia pestis Pestoides A] gi|229898644|ref|ZP_04513789.1| hypothetical protein YPF_3079 [Yersinia pestis biovar Orientalis str. India 195] gi|229902643|ref|ZP_04517760.1| hypothetical protein YP516_2386 [Yersinia pestis Nepal516] gi|294504356|ref|YP_003568418.1| hypothetical protein YPZ3_2246 [Yersinia pestis Z176003] gi|108775947|gb|ABG18466.1| hypothetical protein YPN_2137 [Yersinia pestis Nepal516] gi|108779942|gb|ABG14000.1| hypothetical protein YPA_2034 [Yersinia pestis Antiqua] gi|115348239|emb|CAL21167.1| hypothetical protein YPO2542 [Yersinia pestis CO92] gi|145210928|gb|ABP40335.1| hypothetical protein YPDSF_1952 [Yersinia pestis Pestoides F] gi|149291965|gb|EDM42039.1| hypothetical protein YPE_0720 [Yersinia pestis CA88-4125] gi|162353226|gb|ABX87174.1| conserved hypothetical protein [Yersinia pestis Angola] gi|165914483|gb|EDR33098.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. IP275] gi|165922684|gb|EDR39835.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. F1991016] gi|165993038|gb|EDR45339.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. E1979001] gi|166205014|gb|EDR49494.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. B42003004] gi|166958762|gb|EDR55783.1| conserved hypothetical protein [Yersinia pestis biovar Orientalis str. MG05-1020] gi|167051728|gb|EDR63136.1| conserved hypothetical protein [Yersinia pestis biovar Antiqua str. UG05-0454] gi|167056334|gb|EDR66103.1| conserved hypothetical protein [Yersinia pestis biovar Mediaevalis str. K1973002] gi|229680090|gb|EEO76189.1| hypothetical protein YP516_2386 [Yersinia pestis Nepal516] gi|229688192|gb|EEO80263.1| hypothetical protein YPF_3079 [Yersinia pestis biovar Orientalis str. India 195] gi|229694450|gb|EEO84497.1| hypothetical protein YPH_0310 [Yersinia pestis biovar Orientalis str. PEXU2] gi|229701769|gb|EEO89794.1| hypothetical protein YPS_3068 [Yersinia pestis Pestoides A] gi|262362655|gb|ACY59376.1| hypothetical protein YPD4_2469 [Yersinia pestis D106004] gi|262366284|gb|ACY62841.1| hypothetical protein YPD8_2164 [Yersinia pestis D182038] gi|294354815|gb|ADE65156.1| hypothetical protein YPZ3_2246 [Yersinia pestis Z176003] gi|320014620|gb|ADV98191.1| hypothetical protein YPC_1573 [Yersinia pestis biovar Medievalis str. Harbin 35] Length = 396 Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 1/84 (1%) Query: 56 VSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 + + ++ + I+ E + TD + D + + ++ L K Sbjct: 101 LDDYRRESLCEFAIREILKTVDEAIISQPSTTDSFTKKKNKKAYEDIISMVSY-LVGLTK 159 Query: 116 KIKEDLNSRLGSQFISEVLIDELN 139 + R GS I++VL E N Sbjct: 160 DKIQGAKQRYGSDPITQVLFQEFN 183 >gi|87119481|ref|ZP_01075378.1| hypothetical protein MED121_06070 [Marinomonas sp. MED121] gi|86164957|gb|EAQ66225.1| hypothetical protein MED121_06070 [Marinomonas sp. MED121] Length = 655 Score = 37.7 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 19/147 (12%), Positives = 51/147 (34%), Gaps = 9/147 (6%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 + +WI +V F+ + + ++ + L ++ N ++ E + + S ++ Sbjct: 21 LVVLVLWICLVVSGLFFFITQENDKKILADQRVELMMEQLNELQVEALGLFIYSTNIVPH 80 Query: 64 YFLVKLSFIVNDSQERSYLKEIATDY---LYTLLSGPPMGDFVQIKAFGFDNL--RKKIK 118 + + ++ L D +Y + G P + ++ ++ I Sbjct: 81 SESSVIELSEKEQVLQARLSAEL-DEMVNIYQDIEGFPTIELDIDALLNLQDVSEKELII 139 Query: 119 EDLNSRLGSQFISEVLIDELNYLSIVD 145 + +L VL E +L + Sbjct: 140 DVFQEKLA--IARNVL-HEFKWLKNQE 163 >gi|87120337|ref|ZP_01076232.1| flagellar protein FliL, putative [Marinomonas sp. MED121] gi|86164440|gb|EAQ65710.1| flagellar protein FliL, putative [Marinomonas sp. MED121] Length = 134 Score = 37.7 bits (86), Expect = 0.58, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 34/145 (23%), Gaps = 19/145 (13%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSEL-VSIPSVSNG 59 ML L + S L S + + I+ + ++ Sbjct: 1 MLFRLVLSLLFSGFILASSAF-------------AENDSSELPVYIELRPDFIVNYTTDN 47 Query: 60 VLQAYFLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 Y ++ +Q I D L LS A Sbjct: 48 NRLKYIKASITIRATGAQNAGIIESNMPIVRDGLVIYLSELRAEQVTGAIAREESRKGAA 107 Query: 117 I--KEDLNSRLGSQFISEVLIDELN 139 I E L G + + +VL Sbjct: 108 IFLNEKLKEETGIEPVKDVLFSSFV 132 >gi|325981336|ref|YP_004293738.1| import inner membrane translocase subunit Tim44 [Nitrosomonas sp. AL212] gi|325530855|gb|ADZ25576.1| import inner membrane translocase subunit Tim44 [Nitrosomonas sp. AL212] Length = 285 Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats. Identities = 17/139 (12%), Positives = 45/139 (32%), Gaps = 4/139 (2%) Query: 9 IWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVK 68 I ++ + + + + V P + N E + P+ + + Sbjct: 95 IVTMLLLIGAVFFIIRMLRKPKV-EQSPSMQYSGMNTNTRENFNTPAFTPSAGTTVADSQ 153 Query: 69 LSFIVNDSQERSYLKEIAT---DYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL 125 + + ++ L + GD +I+ + + +I +N R Sbjct: 154 AAHRQPNIPADFKVEPFLRHAKASFMRLQAAHDHGDINEIRDYTTPEMLAEISAQINERG 213 Query: 126 GSQFISEVLIDELNYLSIV 144 +Q +E++ + N L + Sbjct: 214 DAQQTTEIMFIDANLLEVE 232 >gi|22125538|ref|NP_668961.1| hypothetical protein y1643 [Yersinia pestis KIM 10] gi|45442142|ref|NP_993681.1| hypothetical protein YP_2353 [Yersinia pestis biovar Microtus str. 91001] gi|21958439|gb|AAM85212.1|AE013768_1 hypothetical [Yersinia pestis KIM 10] gi|45437006|gb|AAS62558.1| hypothetical protein YP_2353 [Yersinia pestis biovar Microtus str. 91001] Length = 411 Score = 37.7 bits (86), Expect = 0.60, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 1/84 (1%) Query: 56 VSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 + + ++ + I+ E + TD + D + + ++ L K Sbjct: 116 LDDYRRESLCEFAIREILKTVDEAIISQPSTTDSFTKKKNKKAYEDIISMVSY-LVGLTK 174 Query: 116 KIKEDLNSRLGSQFISEVLIDELN 139 + R GS I++VL E N Sbjct: 175 DKIQGAKQRYGSDPITQVLFQEFN 198 >gi|315499920|ref|YP_004088723.1| hypothetical protein Astex_2935 [Asticcacaulis excentricus CB 48] gi|315417932|gb|ADU14572.1| hypothetical protein Astex_2935 [Asticcacaulis excentricus CB 48] Length = 136 Score = 37.7 bits (86), Expect = 0.61, Method: Composition-based stats. Identities = 23/135 (17%), Positives = 36/135 (26%), Gaps = 20/135 (14%) Query: 30 MVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVN---DSQERSYLKEIA 86 M +K V++P NG + Y V L + D + Sbjct: 18 MPSLASEAKKEGGEPYVKLAPVALPVTENGRVINYLFVTLRINLTAKADVNALRLKEPYF 77 Query: 87 TDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDM 146 D L ++F N R + E +V+I E ++ Sbjct: 78 RDLLIRA---------AHKQSFALPNKRDTLDEA--------RFKKVMIPEFTKIAGAGN 120 Query: 147 RSNCLRLGSNASDLM 161 L N LM Sbjct: 121 IDTLEILAQNPKKLM 135 >gi|254439277|ref|ZP_05052771.1| flagellar basal body-associated protein FliL [Octadecabacter antarcticus 307] gi|198254723|gb|EDY79037.1| flagellar basal body-associated protein FliL [Octadecabacter antarcticus 307] Length = 194 Score = 37.7 bits (86), Expect = 0.61, Method: Composition-based stats. Identities = 20/174 (11%), Positives = 45/174 (25%), Gaps = 42/174 (24%) Query: 6 FSGIWISVVTLISFYMLFL-------------------RSMDTMVENHVPPLAIKNTN-- 44 G+ + V + + Y LF + E+ + Sbjct: 21 VIGLVMMGVGIGAGYFLFGGQSNSPEQLAAAIIERNDGALTAEVEEDASDETEGEIPERQ 80 Query: 45 -------------IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI--ATDY 89 + ++ + V +S ++ ++ + Sbjct: 81 SKDSARDDVFQTLYYEIPGTMTTNLKDSRRFLQIGVGISTQYDEVILQNVEANLLAIKAA 140 Query: 90 LYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL----GSQFISEVLIDELN 139 + LS D V +A L + +K +N+ L G + VL+ Sbjct: 141 ILATLSDYGEADVVGREARN--ALSEDLKATINAELEALEGFGGVEGVLLTSFV 192 >gi|331645433|ref|ZP_08346537.1| flagellar basal body-associated protein FliL [Escherichia coli M605] gi|331045595|gb|EGI17721.1| flagellar basal body-associated protein FliL [Escherichia coli M605] Length = 155 Score = 37.7 bits (86), Expect = 0.64, Method: Composition-based stats. Identities = 21/154 (13%), Positives = 47/154 (30%), Gaps = 14/154 (9%) Query: 1 MLKFLFSG----IWISVVTLISFY-----MLFLRSMDTMVENHV-PPLAIKNTNIIKSEL 50 M K + +G + VV + + T + L + + Sbjct: 1 MKKIVVAGVVSAVLALVVGAGAGWSVWHHYAGKGKPTTAAQTESVEALDESKSVFVTLPE 60 Query: 51 VSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKA 107 + N Y +L +V +E + + + L+ D +K Sbjct: 61 TIVTLHDNNGADHYLSAELVMVVASDKEAEKIKHQEPLYQSIAVECLTEMKFEDLRGMKI 120 Query: 108 FGFDNL-RKKIKEDLNSRLGSQFISEVLIDELNY 140 L +K+DL R + ++L+ ++ + Sbjct: 121 SAIRKLISDALKKDLQRRKMTAPYKDLLVKKVVF 154 >gi|187478204|ref|YP_786228.1| flagellar protein [Bordetella avium 197N] gi|115422790|emb|CAJ49318.1| flagellar protein [Bordetella avium 197N] Length = 208 Score = 37.7 bits (86), Expect = 0.65, Method: Composition-based stats. Identities = 15/102 (14%), Positives = 33/102 (32%), Gaps = 10/102 (9%) Query: 45 IIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGD 101 I E ++ +++ + V ++ D Q R + + L +LS Sbjct: 108 FIPLEPFTVT-LNDADSERIMHVGITLRAGDDQTRQRIDRYMPEVRNRLLMVLSSQTPQS 166 Query: 102 FVQIKAFGFDNLRKKIKEDLNSRLG----SQFISEVLIDELN 139 + N+ K + +N Q +++VL Sbjct: 167 VQTVDGK--QNMAKSLMAAINRPFSPLPDGQNVTDVLFTAFV 206 >gi|323976254|gb|EGB71347.1| flagellar basal body protein FliL [Escherichia coli TW10509] Length = 155 Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats. Identities = 22/154 (14%), Positives = 46/154 (29%), Gaps = 14/154 (9%) Query: 1 MLKFLFSG----IWISVVTLISF------YMLFLRSMDTMVENHVPPLAIKNTNIIKSEL 50 M K + +G + VV + Y + V L + + Sbjct: 1 MKKIVVAGVVSAVLALVVGAGAGWGVWHHYAGKGKPTAAAQTESVETLDESKSVFVTLPE 60 Query: 51 VSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKA 107 + Y +L +V +E + + + L+ D +K Sbjct: 61 TIVTLHDKNGADHYLSAELVMVVASDKEAEKIKHQEPLYQSIAVECLTEMKFEDLRGMKI 120 Query: 108 FGFDNL-RKKIKEDLNSRLGSQFISEVLIDELNY 140 L +K+DL R S ++L+ ++ + Sbjct: 121 SAIRKLISDALKQDLQRRKMSAPYKDLLVKKVVF 154 >gi|170023814|ref|YP_001720319.1| hypothetical protein YPK_1573 [Yersinia pseudotuberculosis YPIII] gi|169750348|gb|ACA67866.1| conserved hypothetical protein [Yersinia pseudotuberculosis YPIII] Length = 359 Score = 37.7 bits (86), Expect = 0.70, Method: Composition-based stats. Identities = 15/84 (17%), Positives = 30/84 (35%), Gaps = 1/84 (1%) Query: 56 VSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 + + ++ + I+ E + TD + D + + ++ L K Sbjct: 101 LDDYRRESLCEFAIREILKTVDEAIISQPSTTDSFTKKKNKKAYEDIISMVSY-LVGLTK 159 Query: 116 KIKEDLNSRLGSQFISEVLIDELN 139 + R GS I++VL E N Sbjct: 160 DKIQGAKQRYGSDPITQVLFQEFN 183 >gi|94501663|ref|ZP_01308179.1| flagellar protein [Oceanobacter sp. RED65] gi|94426239|gb|EAT11231.1| flagellar protein [Oceanobacter sp. RED65] Length = 134 Score = 37.3 bits (85), Expect = 0.72, Method: Composition-based stats. Identities = 13/133 (9%), Positives = 35/133 (26%), Gaps = 14/133 (10%) Query: 14 VTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA--YFLVKLSF 71 V L+S + + T + + + + Y ++ Sbjct: 6 VLLVSVLICMQTWSEEGTGGGG-------TQYVHLQPAFVLNYGENSSGKLKYIRTDVAL 58 Query: 72 IVNDSQERSY---LKEIATDYLYTLLSGPPMGDFVQ-IKAFGFDNL-RKKIKEDLNSRLG 126 V ++ + + L LLS + +++K L+ G Sbjct: 59 RVTGAEAAGKVNHHQAYIRNQLVLLLSQQTDETVNTATGREELRQVALEEVKALLSELEG 118 Query: 127 SQFISEVLIDELN 139 ++ ++ Sbjct: 119 KPYVDDLYFQNFV 131 >gi|331006677|ref|ZP_08329955.1| Flagellar biosynthesis protein fliL [gamma proteobacterium IMCC1989] gi|330419509|gb|EGG93897.1| Flagellar biosynthesis protein fliL [gamma proteobacterium IMCC1989] Length = 138 Score = 37.3 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 11/113 (9%), Positives = 30/113 (26%), Gaps = 9/113 (7%) Query: 34 HVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQER---SYLKEIATDYL 90 + + I + + Q + ++ + + + + L Sbjct: 26 EEEEVEKGYAIYFPLKPPIIVNFQSRGRQRFLQADITLLTREDDVIDAIETHMPMIRNAL 85 Query: 91 YTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF----ISEVLIDELN 139 G D + LR++ E L + + + I ++L Sbjct: 86 VLKFGGQTYEDMQTEQGREL--LRQESLEALQNIMLQEIDKTGIEKLLFTNFV 136 >gi|146312181|ref|YP_001177255.1| flagellar basal body-associated protein FliL [Enterobacter sp. 638] gi|145319057|gb|ABP61204.1| flagellar basal body-associated protein FliL [Enterobacter sp. 638] Length = 155 Score = 37.3 bits (85), Expect = 0.75, Method: Composition-based stats. Identities = 15/140 (10%), Positives = 33/140 (23%), Gaps = 6/140 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + L + T Y P + ++ ++ + Sbjct: 16 IPLLVLITLAACATAGYSYW--RSQQAPSATAKAEPPPPPAPVFFPMDTFTV-NLGDADR 72 Query: 62 QAYFLVKLSFI-VNDSQERSYLKEIATDYLYTLLSGPPMGDFV--QIKAFGFDNLRKKIK 118 Y + L S L L S K + +++ + Sbjct: 73 VLYIGITLRLKDEATRTRLSDYLPEVRSRLLLLFSRQDATGLSTDDGKQKLVEAIKQTLA 132 Query: 119 EDLNSRLGSQFISEVLIDEL 138 L + Q +++VL Sbjct: 133 PPLVTGQPKQEVTDVLYTAF 152 >gi|168334556|ref|ZP_02692712.1| hypothetical protein Epulo_06158 [Epulopiscium sp. 'N.t. morphotype B'] Length = 154 Score = 37.3 bits (85), Expect = 0.78, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 36/138 (26%), Gaps = 12/138 (8%) Query: 11 ISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKS-ELVSIPSVSNGVLQAYFLVKL 69 + + L + +F P + + + + + Sbjct: 16 LLLTILGAVAAVFFFMNQEPPAPVDPNRRPEEIVTVALTATLMANVLDESGDVHVLRIHP 75 Query: 70 SFIVNDS---------QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 +F +N ++ D + TL S + A + IK+ Sbjct: 76 AFELNAESDGIDILNATTFPLMEIRIRDAILTLASTYTYEMLLAPGAHSRVAI--DIKDT 133 Query: 121 LNSRLGSQFISEVLIDEL 138 +N + I V+ E Sbjct: 134 INXLFDTDVIFGVIWQEF 151 >gi|295111383|emb|CBL28133.1| Flagellar basal body-associated protein [Synergistetes bacterium SGP1] Length = 151 Score = 37.3 bits (85), Expect = 0.80, Method: Composition-based stats. Identities = 21/150 (14%), Positives = 41/150 (27%), Gaps = 15/150 (10%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+ F+ G+ + V ML + I+ + G Sbjct: 4 MIVFVVIGLVMFGVGFGGGLMLGRTMASGEGGAAKAREVAEPGPIVTIGEFTSNL--AGA 61 Query: 61 LQAYFLVKLSFIVNDSQERSYLK-------EIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113 + +S + + +E + + + D + Sbjct: 62 GRHVVSFTVSLELVNKKEEIAAAVQNMGWLVRIKNEILLIAKDKTYDDLNSAEGT--VQF 119 Query: 114 RKKIKEDLNSRL----GSQFISEVLIDELN 139 + IK LNS L G I++VL + Sbjct: 120 QGDIKRVLNSILPNVGGEAPIAQVLFESFV 149 >gi|317129198|ref|YP_004095480.1| flagellar basal body-associated protein FliL [Bacillus cellulosilyticus DSM 2522] gi|315474146|gb|ADU30749.1| flagellar basal body-associated protein FliL [Bacillus cellulosilyticus DSM 2522] Length = 143 Score = 37.3 bits (85), Expect = 0.81, Method: Composition-based stats. Identities = 19/119 (15%), Positives = 43/119 (36%), Gaps = 5/119 (4%) Query: 18 SFYMLFLRSMDTMVENHVPPLAIKNT--NIIKSELVSIPSVSNGVLQAYFLVKLSFIVND 75 L + I + +++E ++ +SN +++ F+++L + Sbjct: 21 GVLATVLYTQVFQETRAEGEPTIDDILKVSVETEEITTNLLSNHIIRTQFVIQLD-NDDA 79 Query: 76 SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVL 134 E + + LS DF + G ++ IK+ +N + S + EV Sbjct: 80 VNEFQKRDFQVENIIIQELSDMRESDFR--GSEGIVKMQNGIKKRINEIMQSGEVVEVY 136 >gi|152997441|ref|YP_001342276.1| flagellar basal body-associated protein FliL [Marinomonas sp. MWYL1] gi|150838365|gb|ABR72341.1| flagellar basal body-associated protein FliL [Marinomonas sp. MWYL1] Length = 170 Score = 37.3 bits (85), Expect = 0.87, Method: Composition-based stats. Identities = 18/141 (12%), Positives = 38/141 (26%), Gaps = 27/141 (19%) Query: 17 ISFYMLFLRSMDTMVENHVPPLAI----KNTNIIKSEL-VSIPSVSNGVLQAYFLVKLSF 71 + Y LF + + + + + ++ + +G Q Y + +S Sbjct: 37 AAAYFLFFSGSSDGSGDSAESAEAALANEPSTYLALDPAFTVDFMVDGK-QRYVQLNMSV 95 Query: 72 I---VNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGF------DNLRKKIKEDLN 122 + + + + L L S + L+K + +N Sbjct: 96 KSKKIEQINAVTLHMPLIRNSLVLLFSSQSF--------VDLQTADGKEALKKASLDAIN 147 Query: 123 SRL----GSQFISEVLIDELN 139 L G I VL Sbjct: 148 GILEQETGQGGIDAVLFTNFV 168 >gi|310641554|ref|YP_003946312.1| flagellar basal body-associated protein flil [Paenibacillus polymyxa SC2] gi|309246504|gb|ADO56071.1| Flagellar basal body-associated protein FliL [Paenibacillus polymyxa SC2] Length = 157 Score = 37.3 bits (85), Expect = 0.89, Method: Composition-based stats. Identities = 19/152 (12%), Positives = 45/152 (29%), Gaps = 17/152 (11%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMD--------TMVENHVPPLAIKNTNIIKSELVS 52 ML +L + + + + ++L + +++ Sbjct: 4 MLPWLITILLAITLIAGAAFVLIPALSGKKSEVIPNAQAAQAEQLPRLSADELVEVSSEI 63 Query: 53 IPSVSNGVLQAY-FLVKLSFIVNDSQERSYLKEIATD-----YLYTLLSGPPMGDFVQIK 106 +N Y + L+F +ND++ + E D + LL+ + K Sbjct: 64 TGIKTNLADADYIVQMNLAFQLNDAKAKEAF-EKIKDISIKPIVIQLLADTKPDELRTAK 122 Query: 107 AFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 K+ + +N L + I + Sbjct: 123 GRD--QFSDKLTDLINKSLPEGHLGNAKITDF 152 >gi|329298599|ref|ZP_08255935.1| flagellar basal body-associated protein FliL [Plautia stali symbiont] Length = 161 Score = 37.0 bits (84), Expect = 0.94, Method: Composition-based stats. Identities = 15/144 (10%), Positives = 35/144 (24%), Gaps = 13/144 (9%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL-Q 62 L + V + + + + E + ++ V+ Sbjct: 19 LLIVTLAACSVAGYAVWRMMNKHEGDKPEAAKVEPPPAPV-FFAMDTFTVNLVNPDNDPD 77 Query: 63 AYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN 122 V + + D R L + + LL A + ++ + E + Sbjct: 78 RVLYVGFTLRLPDEDTRRRLNDYLPEVRSRLLLLLSRQ---SANALATEQGKQALVEQIK 134 Query: 123 SRLGSQFIS--------EVLIDEL 138 L + +VL Sbjct: 135 QVLAPPLVKGQPAQVVSDVLFTTF 158 >gi|242280064|ref|YP_002992193.1| flagellar basal body-associated protein FliL [Desulfovibrio salexigens DSM 2638] gi|242122958|gb|ACS80654.1| flagellar basal body-associated protein FliL [Desulfovibrio salexigens DSM 2638] Length = 234 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 12/100 (12%), Positives = 33/100 (33%), Gaps = 5/100 (5%) Query: 42 NTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPP 98 +++ + I + + + + D + + I D +Y L Sbjct: 134 GVTLLRMDPFWIEQKDKDERTRFLIARFAMTTTDERVVAEYGRKTLILRDAVYFYLKNKD 193 Query: 99 MGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + K + L+K + +N + + ++L +E Sbjct: 194 LQFLADEK--NVEKLKKDLLMVINQYIVAGEFEKILFEEY 231 >gi|150020567|ref|YP_001305921.1| hypothetical protein Tmel_0672 [Thermosipho melanesiensis BI429] gi|149793088|gb|ABR30536.1| hypothetical protein Tmel_0672 [Thermosipho melanesiensis BI429] Length = 100 Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats. Identities = 10/41 (24%), Positives = 19/41 (46%) Query: 96 GPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLID 136 G + I A ++KI++ +N +LG + V+I Sbjct: 51 GNIYVECESIYATELQFFKEKIRDRINEKLGEDMVKRVIIK 91 >gi|209963568|ref|YP_002296483.1| hypothetical protein RC1_0221 [Rhodospirillum centenum SW] gi|209957034|gb|ACI97670.1| hypothetical protein RC1_0221 [Rhodospirillum centenum SW] Length = 153 Score = 37.0 bits (84), Expect = 0.98, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 36/133 (27%), Gaps = 4/133 (3%) Query: 3 KFLFSGIWISVV---TLISFYMLFLRSMDTMVENHVPPLAIKNTNII-KSELVSIPSVSN 58 + + + S V L + + + L K+ ++ + +P Sbjct: 6 RLFLAAVASSAVLGFALGRVVVQPVPATPPADPPPGAALGSKDIEMLADLGQIIVPIWRE 65 Query: 59 GVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 G + Y +S + S L I D + L + L + Sbjct: 66 GRIAGYVAAAISLRLAPGSAPSELMPILHDRMLATLIDAGAEGRLDPGTADPAALSAALL 125 Query: 119 EDLNSRLGSQFIS 131 E +G + Sbjct: 126 EAARDAIGPDRVR 138 >gi|87306566|ref|ZP_01088713.1| hypothetical protein DSM3645_09542 [Blastopirellula marina DSM 3645] gi|87290745|gb|EAQ82632.1| hypothetical protein DSM3645_09542 [Blastopirellula marina DSM 3645] Length = 136 Score = 37.0 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 10/120 (8%), Positives = 28/120 (23%), Gaps = 12/120 (10%) Query: 25 RSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSF--------IVNDS 76 + L ++ S+ + + + Sbjct: 14 AKEPPVEAAQSADLPEVPPVEMEIGDFKFRM-SDPTAGTTTKFNFTLYGLVPGDQVTDAQ 72 Query: 77 QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLID 136 ++ D + + RK++ ++N LG + E+ +D Sbjct: 73 AAMDEREQRLRDRVLRTAREASPVELEDP---DLTMFRKRMLLEVNRELGEMYFQELFLD 129 >gi|203287739|ref|YP_002222754.1| flagellar protein [Borrelia recurrentis A1] gi|201084959|gb|ACH94533.1| flagellar protein [Borrelia recurrentis A1] Length = 178 Score = 37.0 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 20/151 (13%), Positives = 52/151 (34%), Gaps = 20/151 (13%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 L+ L G++ V+ +I Y + + + I + ++ + I S + Sbjct: 31 LQILAIGLFTVVIMIIVSYFVSKMVVSQSGAPN--NFPIFSNEYLEKLPMLIWYESIDEI 88 Query: 62 QA----------YFLVKLSFIVND-SQERSYLKEIAT--DYLYTLLSGPPMGDFVQIKAF 108 + + L + N+ + ++ D + S + Sbjct: 89 RGTTQDTPPKTFVIKLALGYAENNVNILSELGRQKVRLKDIIREYFSQRTGQEIKNES-- 146 Query: 109 GFDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 ++ +IK +NS L + I E+ + +++ Sbjct: 147 ---QIKAEIKARINSILRNGEIKEIALTQID 174 >gi|313206676|ref|YP_004045853.1| peptidoglycan glycosyltransferase [Riemerella anatipestifer DSM 15868] gi|312445992|gb|ADQ82347.1| Peptidoglycan glycosyltransferase [Riemerella anatipestifer DSM 15868] gi|315022173|gb|EFT35202.1| Monofunctional biosynthetic peptidoglycan transglycosylase [Riemerella anatipestifer RA-YM] gi|325335883|gb|ADZ12157.1| Membrane carboxypeptidase (penicillin-binding protein) [Riemerella anatipestifer RA-GD] Length = 789 Score = 37.0 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 16/129 (12%), Positives = 38/129 (29%), Gaps = 22/129 (17%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTN-IIKSELVSIPSVSNGV 60 +K ++ G+ VV + + + + + + ++N + + SE++ Sbjct: 28 IKLIWLGLVGFVVGVAALFFATSQGL---LGEMPDVQDLENPDIYVASEII--------S 76 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 L K D + +L L F + ++ + I Sbjct: 77 SDGVTLGKFEMEKTDPITYKDMPP----HLIYALQAKEDERFKEHSGIDLKSILRAI--- 129 Query: 121 LNSRLGSQF 129 R G Sbjct: 130 ---RFGGDR 135 >gi|331671819|ref|ZP_08372615.1| flagellar basal body-associated protein FliL [Escherichia coli TA280] gi|331070808|gb|EGI42167.1| flagellar basal body-associated protein FliL [Escherichia coli TA280] Length = 155 Score = 37.0 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 23/154 (14%), Positives = 49/154 (31%), Gaps = 14/154 (9%) Query: 1 MLKFLFSGIWISVVTLISF----------YMLFLRSMDTMVENHVPPLAIKNTNIIKSEL 50 M K + +G+ +V+ L+ Y + V L + + Sbjct: 1 MKKIVVAGVVSAVLALVVGARAGWGVWHHYAGKGKPTAAAQTETVETLDESKSVFVTLPE 60 Query: 51 VSIPSVSNGVLQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKA 107 + N Y +L +V +E + + + L+ D +K Sbjct: 61 TIVTLHDNNGADHYLSAELVMVVASDKEAEKIKHQEPLYQSIAVECLTEMKFEDLRGMKI 120 Query: 108 FGFDNL-RKKIKEDLNSRLGSQFISEVLIDELNY 140 L +K+DL R S ++L+ ++ + Sbjct: 121 SAIRKLISDALKKDLQRRKMSAPYKDLLVKKVVF 154 >gi|124801951|ref|XP_001347315.1| conserved Plasmodium protein [Plasmodium falciparum 3D7] gi|23494893|gb|AAN35228.1| conserved Plasmodium protein [Plasmodium falciparum 3D7] Length = 553 Score = 37.0 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 17/103 (16%), Positives = 41/103 (39%), Gaps = 8/103 (7%) Query: 47 KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIK 106 K E ++ S+ ++Y + ++ + N + Y + TD L+ + +F Sbjct: 335 KLENFNLNSIFKQHNRSYSRLLVNEVFN----KEYPSKKITDIFLNLIFQKNVDEFTYES 390 Query: 107 AFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149 N+ + E +N S + D+ ++L +++ N Sbjct: 391 FIKHLNILGRKIELINCDFNS----NIYFDQFHFLMKSELKKN 429 >gi|110803174|ref|YP_697868.1| ABC transporter substrate-binding protein [Clostridium perfringens SM101] gi|110683675|gb|ABG87045.1| ABC transporter, substrate-binding protein [Clostridium perfringens SM101] Length = 461 Score = 37.0 bits (84), Expect = 1.2, Method: Composition-based stats. Identities = 13/121 (10%), Positives = 37/121 (30%), Gaps = 3/121 (2%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K + V + + + + + +++ P + + +++ I G + Sbjct: 4 KLVKMLTVACVTAIAASAFVGCGNKEETPKDNEKPSTEQAEGSGEKKVLEIAVFEGGFGK 63 Query: 63 AYFLV---KLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 Y+ D + + D + LS DF+ + + + + Sbjct: 64 DYWEACIEAFEAEHPDVEVKMEANPKIGDIIRPKLSSEKTPDFIYLSTNDPSGIANALIK 123 Query: 120 D 120 D Sbjct: 124 D 124 >gi|227820863|ref|YP_002824833.1| putative flagellar basal body-associated protein FliL [Sinorhizobium fredii NGR234] gi|227339862|gb|ACP24080.1| putative flagellar basal body-associated protein FliL [Sinorhizobium fredii NGR234] Length = 163 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 21/150 (14%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHV---------------PPLAIKNTNIIKSE 49 + + +++V +++ + E P +A + I++ E Sbjct: 18 IAAVAVLTLVAGGGGWLVGIFLAPPPAEKAEAVAEVPENATGEEGLPKIATEANGIVQLE 77 Query: 50 LVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFG 109 ++ V L F L E + L + + G Sbjct: 78 PITTNLAYPAENWVRVEVALQF---KGVPDVALAEEIHQDIIAYLKTVSLQQIQGPR--G 132 Query: 110 FDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 F LR I+E ++ R ++ V+ Sbjct: 133 FQYLRDDIQERVDLR-SDGRVTNVMFRTFV 161 >gi|15964420|ref|NP_384773.1| flagellar transmembrane protein [Sinorhizobium meliloti 1021] gi|307311562|ref|ZP_07591203.1| flagellar basal body-associated protein FliL [Sinorhizobium meliloti BL225C] gi|15073597|emb|CAC45239.1| Flagellar transmembrane protein [Sinorhizobium meliloti 1021] gi|306899579|gb|EFN30208.1| flagellar basal body-associated protein FliL [Sinorhizobium meliloti BL225C] Length = 163 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 18/150 (12%), Positives = 41/150 (27%), Gaps = 21/150 (14%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNI---------------IKSE 49 + + +++V ++ + E P + ++ + Sbjct: 18 IAAVAVLTLVAGGGGWLAGMLLAPPPAEKTEIPAELPANATGEEGIPKMSAVAHGIVQLD 77 Query: 50 LVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFG 109 ++ V L F D L E + L + + G Sbjct: 78 PITTNLAYPAENWVRLEVALQF---DGAPDVALAETIHQDIAAYLKTVSLQQIQGPR--G 132 Query: 110 FDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 F LR I+E ++ R ++ V+ Sbjct: 133 FQYLRDDIQERVDLR-SEGRVTNVMFRTFV 161 >gi|157364675|ref|YP_001471442.1| flagellar basal body-associated protein FliL [Thermotoga lettingae TMO] gi|157315279|gb|ABV34378.1| flagellar basal body-associated protein FliL [Thermotoga lettingae TMO] Length = 164 Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 23/129 (17%), Positives = 41/129 (31%), Gaps = 7/129 (5%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M+ L + VT+++ ML E +I+S + G Sbjct: 16 MM-ILIPAVVAVGVTIVTIMMLGTNLTSQRQETTTATPVEIKAVLIQSGTYQTFMLKGGK 74 Query: 61 LQAYFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 A + LSF V R+ + + D L + + L+K+I Sbjct: 75 EVA-VIDSLSFTVASDACRAAIGSKNDEIMDGLMLIFLSKDKSELNTAAGIEL--LKKQI 131 Query: 118 KEDLNSRLG 126 + +N G Sbjct: 132 RAMVNEITG 140 >gi|213514670|ref|NP_001133598.1| RUN domain-containing protein 1 [Salmo salar] gi|209154628|gb|ACI33546.1| RUN domain-containing protein 1 [Salmo salar] Length = 569 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 18/144 (12%), Positives = 47/144 (32%), Gaps = 12/144 (8%) Query: 32 ENHVPPLAIKNTNIIKSELVSIPSVSN-GVLQAYFLVKLSFIVNDSQERSYLKEIATDYL 90 + K + + + + L+ Y + S+ +++ D L Sbjct: 131 ASEREKRERLEVQREKQKELIVQLKTQLDDLERYAYQEGSYDSLPQSVVMERQKVIIDEL 190 Query: 91 YTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNC 150 L D + + LR+++ + + + E L+D+L +R Sbjct: 191 IKKLDVNFNEDIGNLT---PEELRQRVDAAIAQIVNPARVKEQLVDQL----KTQIRDLE 243 Query: 151 LRLGSNASDLMTQKGSLIEKNKEP 174 + + + + G+ + + EP Sbjct: 244 MFINF----IQDEVGNPLLSDGEP 263 >gi|30044026|ref|NP_835623.1| hypothetical protein Rm378p036 [Rhodothermus phage RM378] Length = 781 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 7/50 (14%), Positives = 14/50 (28%) Query: 70 SFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 + + + + D + L G P DF + I + Sbjct: 556 QYESKREEILNEIIPKLKDEIIKTLFGTPTRDFNDATRENILKYKDIIMD 605 >gi|194365651|ref|YP_002028261.1| flagellar basal body-associated protein FliL [Stenotrophomonas maltophilia R551-3] gi|194348455|gb|ACF51578.1| flagellar basal body-associated protein FliL [Stenotrophomonas maltophilia R551-3] Length = 171 Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 12/127 (9%), Positives = 29/127 (22%), Gaps = 7/127 (5%) Query: 20 YMLFLRSM-DTMVENHVPPLAIKNTNIIKSELVSIPSVSNG-VLQAYFLVKLSFIVNDSQ 77 + D A + + +++ Y +++ + D Sbjct: 43 WFFSQSKQEDKAAPAPKKAAAPAPAQYFALDPAFVVNLNGPVDGPRYLQLEVQLMTRDPA 102 Query: 78 ERSY---LKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLR--KKIKEDLNSRLGSQFISE 132 L L S I ++++ L + GS + Sbjct: 103 ALEAIKTHAPAIRARLLMLFSQVSPDQIADIAGKQKLQATSLAEVQKVLKAETGSNGADD 162 Query: 133 VLIDELN 139 +L Sbjct: 163 LLFTSFV 169 >gi|238912452|ref|ZP_04656289.1| flagellar basal body-associated protein FliL [Salmonella enterica subsp. enterica serovar Tennessee str. CDC07-0191] Length = 155 Score = 36.6 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 15/140 (10%), Positives = 33/140 (23%), Gaps = 6/140 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + L + T Y + P + ++ ++ + Sbjct: 16 IPLLVLITLAACATAGYSYWRMQQ--QPTTNAKAEPAPPPAPVFFALDTFTV-NLGDADR 72 Query: 62 QAYFLVKLSFI-VNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ--IKAFGFDNLRKKIK 118 Y V L + L L S K +++ + Sbjct: 73 VLYIGVTLRLKDEATRARLNEYLPEVRSRLLLLFSRQNAAALSTEAGKQKLIAAIKETLA 132 Query: 119 EDLNSRLGSQFISEVLIDEL 138 L + Q +++VL Sbjct: 133 APLVAGQPKQVVTDVLYTAF 152 >gi|15639709|ref|NP_219159.1| flagellar basal body-associated protein FliL [Treponema pallidum subsp. pallidum str. Nichols] gi|189025947|ref|YP_001933719.1| flagellar basal body-associated protein FliL [Treponema pallidum subsp. pallidum SS14] gi|4033382|sp|O07888|FLIL_TREPA RecName: Full=Flagellar protein FliL gi|2196897|gb|AAB61255.1| FliL [Treponema pallidum] gi|3323024|gb|AAC65688.1| flagellar protein (fliL) [Treponema pallidum subsp. pallidum str. Nichols] gi|189018522|gb|ACD71140.1| flagellar protein [Treponema pallidum subsp. pallidum SS14] gi|291060086|gb|ADD72821.1| flagellar basal body-associated protein FliL [Treponema pallidum subsp. pallidum str. Chicago] Length = 182 Score = 36.6 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 19/144 (13%), Positives = 44/144 (30%), Gaps = 8/144 (5%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDT-----MVENHVPPLAIKNTNIIKSELVSIPSVSNG 59 + G I +VT+++ L L + V L+ + Sbjct: 38 IAVGAVIFIVTVVTATALVLAKQGSSHTAYPVSQEFRESRELLQYYESVGLIRTNTADAL 97 Query: 60 VLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGP-PMGDFVQIKAFGFDNLRKKIK 118 V L + +ND + L L L +++ ++ +I+ Sbjct: 98 PGTVVVSVALGYPLNDKTAQQELSARLV-ELKDFLRSYFQRKTLSELRPEHEQKVKIEIR 156 Query: 119 EDLNS-RLGSQFISEVLIDELNYL 141 ++N L + ++ + + L Sbjct: 157 NEINDNVLSRSKVKDIRFTQFDVL 180 >gi|168214526|ref|ZP_02640151.1| ABC transporter, solute-binding protein [Clostridium perfringens CPE str. F4969] gi|170714014|gb|EDT26196.1| ABC transporter, solute-binding protein [Clostridium perfringens CPE str. F4969] Length = 461 Score = 36.6 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 13/121 (10%), Positives = 37/121 (30%), Gaps = 3/121 (2%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K + V + + + + + +++ P + + +++ I G + Sbjct: 4 KLVKMLTVACVTAIAASAFVGCGNKEEAPKDNEKPSTEQAEGSGEKKVLEIAVFEGGFGK 63 Query: 63 AY---FLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 Y + D + + D + LS DF+ + + + + Sbjct: 64 DYWDACIDAFEAEHPDVEVKMEANPKIGDIIRPKLSSSNTPDFIYLSTNDPSGIANALIK 123 Query: 120 D 120 D Sbjct: 124 D 124 >gi|157872772|ref|XP_001684914.1| kinesin [Leishmania major strain Friedlin] gi|68127984|emb|CAJ06716.1| putative kinesin [Leishmania major strain Friedlin] Length = 1191 Score = 36.6 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 14/126 (11%), Positives = 33/126 (26%), Gaps = 15/126 (11%) Query: 62 QAYFLVKLSFIVNDSQERSY--LKEIATD----YLYTLLSGPPMGDFVQ--------IKA 107 + + ++ + + + D LL + + ++ Sbjct: 672 EKLVQAGVEISESNEELQELREKRAELVDPEELESLRLLMQADIDELRSQRDELQAELRR 731 Query: 108 FGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSL 167 +R+ + N G + +L +++ DMR N R G Sbjct: 732 VNEARVRESVARRRNVLDGPDTLKRILAEDVG-EGTEDMRDNAAREQGRGDSGNAADGVH 790 Query: 168 IEKNKE 173 K Sbjct: 791 KVGPKA 796 >gi|295115583|emb|CBL36430.1| conserved hypothetical protein/conserved hypothetical protein TIGR02688 [butyrate-producing bacterium SM4/1] Length = 705 Score = 36.6 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 16/112 (14%), Positives = 39/112 (34%), Gaps = 12/112 (10%) Query: 57 SNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLS---GPPMGDFVQIKAFGFDNL 113 + YF + + D+ D L+ + ++ + + Sbjct: 419 YGDAIDHYFRLGKNLNQRDTIAVR----RMVDGYLKLVYPDGEFTKEELEEVLKLSLE-M 473 Query: 114 RKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKG 165 R+++KE L +LG +V +Y+ + DM + + + + +G Sbjct: 474 RRRVKEQL-KKLGGMEFYDV---NFSYIDMDDMSEHYVSVPEQGGGKLIPEG 521 >gi|167567741|ref|ZP_02360657.1| Flagellar basal body-associated protein [Burkholderia oklahomensis EO147] gi|167574692|ref|ZP_02367566.1| Flagellar basal body-associated protein [Burkholderia oklahomensis C6786] Length = 157 Score = 36.6 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 12/113 (10%), Positives = 28/113 (24%), Gaps = 10/113 (8%) Query: 11 ISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPS--------VSNGVLQ 62 + V + FL P + +E + + V+ G Sbjct: 16 LVAVAIGGSLWAFLSYEPKAATAEASPPPPDPYKYVGTERIVVMLKQPDESASVARGADV 75 Query: 63 AYFLVKLSFIVNDSQER--SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113 Y ++ + +E + + LSG ++ + Sbjct: 76 HYAVLDIVLKTRPEKEAATRAHLLLLRSLVVEALSGYTFDALRRVNVDQLSGV 128 >gi|168207408|ref|ZP_02633413.1| ABC transporter, solute-binding protein [Clostridium perfringens E str. JGS1987] gi|170661231|gb|EDT13914.1| ABC transporter, solute-binding protein [Clostridium perfringens E str. JGS1987] Length = 461 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 13/121 (10%), Positives = 37/121 (30%), Gaps = 3/121 (2%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K + V + + + + + +++ P + + +++ I G + Sbjct: 4 KLVKMLTVACVTAIAASAFVGCGNKEEAPKDNEKPSTEQAEGSGEKKVLEIAVFEGGFGK 63 Query: 63 AY---FLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 Y + D + + D + LS DF+ + + + + Sbjct: 64 DYWDACIDAFEAEHPDVEVKMEANPKIGDIIRPKLSSENTPDFIYLSTNDPSGIANALIK 123 Query: 120 D 120 D Sbjct: 124 D 124 >gi|18309558|ref|NP_561492.1| ABC transporter [Clostridium perfringens str. 13] gi|18144235|dbj|BAB80282.1| probable ABC transporter [Clostridium perfringens str. 13] Length = 461 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 13/121 (10%), Positives = 37/121 (30%), Gaps = 3/121 (2%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K + V + + + + + +++ P + + +++ I G + Sbjct: 4 KLVKMLTVACVTAIAASAFVGCGNKEEAPKDNEKPSTEQAEGSGEKKVLEIAVFEGGFGK 63 Query: 63 AY---FLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 Y + D + + D + LS DF+ + + + + Sbjct: 64 DYWDACIDAFEAEHPDVEVKMEANPKIGDIIRPKLSSENTPDFIYLSTNDPSGIANALIK 123 Query: 120 D 120 D Sbjct: 124 D 124 >gi|168210311|ref|ZP_02635936.1| ABC transporter, solute-binding protein [Clostridium perfringens B str. ATCC 3626] gi|169343079|ref|ZP_02864106.1| ABC transporter, solute-binding protein [Clostridium perfringens C str. JGS1495] gi|182626542|ref|ZP_02954290.1| ABC transporter, solute-binding protein [Clostridium perfringens D str. JGS1721] gi|169298989|gb|EDS81063.1| ABC transporter, solute-binding protein [Clostridium perfringens C str. JGS1495] gi|170711609|gb|EDT23791.1| ABC transporter, solute-binding protein [Clostridium perfringens B str. ATCC 3626] gi|177908130|gb|EDT70696.1| ABC transporter, solute-binding protein [Clostridium perfringens D str. JGS1721] Length = 461 Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 13/121 (10%), Positives = 37/121 (30%), Gaps = 3/121 (2%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K + V + + + + + +++ P + + +++ I G + Sbjct: 4 KLVKMLTVACVTAIAASAFVGCGNKEEAPKDNEKPSTEQAEGSGEKKVLEIAVFEGGFGK 63 Query: 63 AY---FLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 Y + D + + D + LS DF+ + + + + Sbjct: 64 DYWDACIDAFEAEHPDVEVKMEANPKIGDIIRPKLSSENTPDFIYLSTNDPSGIANALIK 123 Query: 120 D 120 D Sbjct: 124 D 124 >gi|153931184|ref|YP_001384895.1| chemotaxis motB protein [Clostridium botulinum A str. ATCC 19397] gi|152927228|gb|ABS32728.1| chemotaxis protein MotB [Clostridium botulinum A str. ATCC 19397] Length = 420 Score = 36.2 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 49/147 (33%), Gaps = 26/147 (17%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVS--------------------IP 54 +F L + + N + + NTN+I S+ + + Sbjct: 274 GAGAFGGYMLFAKNKKNANSANQMPVNNTNVINSQQTNDGMYPQQVVVSSKTYSLDEFLV 333 Query: 55 SVSNGVLQAYFLVKLSF---IVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFD 111 ++++ + + K+ ++E K I D + +L D D Sbjct: 334 NLADEDGKRFVKAKIFIGYEEKKLAKELEKKKPILRDAVIGVLRSKKAADI---NPKNID 390 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDEL 138 ++ +I ++ L IS + D+L Sbjct: 391 KIKVEIINKISPMLEKGRISSIYFDDL 417 >gi|312879598|ref|ZP_07739398.1| flagellar basal body-associated protein FliL [Aminomonas paucivorans DSM 12260] gi|310782889|gb|EFQ23287.1| flagellar basal body-associated protein FliL [Aminomonas paucivorans DSM 12260] Length = 148 Score = 36.2 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 12/117 (10%), Positives = 37/117 (31%), Gaps = 15/117 (12%) Query: 31 VENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKE-----I 85 + L + +I ++++ + ++ + + + L + Sbjct: 35 EKTAQKVLPPGP--SVPLGSFTI-NLADPEPHI-LQLGITLELENDKASELLAQAGWISR 90 Query: 86 ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF----ISEVLIDEL 138 + + + D + G L + ++ +N+ L I +VL +E Sbjct: 91 LKNEVLLTVKDRRFEDLKHAE--GVQALAQDLRGRMNALLPQVKGVVPIRQVLFEEF 145 >gi|300866251|ref|ZP_07110963.1| Sensor protein [Oscillatoria sp. PCC 6506] gi|300335770|emb|CBN56123.1| Sensor protein [Oscillatoria sp. PCC 6506] Length = 362 Score = 36.2 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 17/87 (19%), Positives = 30/87 (34%), Gaps = 6/87 (6%) Query: 74 NDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEV 133 + + + S M D + +++ LN LG +EV Sbjct: 108 PAELLAAIATRLQKQAIINKHSEKRMDDLRRNITRSLP---HELRTPLNGILG---FTEV 161 Query: 134 LIDELNYLSIVDMRSNCLRLGSNASDL 160 LI E +YL ++R R+ + L Sbjct: 162 LISEYDYLEPSEIREIIQRIHYSGKRL 188 >gi|254882725|ref|ZP_05255435.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|319643968|ref|ZP_07998543.1| gliding motility-associated lipoprotein GldB [Bacteroides sp. 3_1_40A] gi|254835518|gb|EET15827.1| conserved hypothetical protein [Bacteroides sp. 4_3_47FAA] gi|317384492|gb|EFV65459.1| gliding motility-associated lipoprotein GldB [Bacteroides sp. 3_1_40A] Length = 333 Score = 36.2 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 19/128 (14%), Positives = 37/128 (28%), Gaps = 11/128 (8%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSN-- 58 M++ + + + +V L S V+ V + S N Sbjct: 1 MMRKIIFILVVCLVALSSCQWDGKSGNTADVDVRVARYDRLQYEYVTMNSFSALQKMNTD 60 Query: 59 -GVLQAYFL--VKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIK------AFG 109 + + V V+D + + E +D L F + G Sbjct: 61 YPQVTKLLIEDVLAIGEVDDMKINDRMLEYYSDSTLLTLMHDAEEKFKDLGWVEEKLTKG 120 Query: 110 FDNLRKKI 117 F L+K++ Sbjct: 121 FKRLKKEV 128 >gi|94500286|ref|ZP_01306819.1| Flagellar basal body-associated protein FliL [Oceanobacter sp. RED65] gi|94427585|gb|EAT12562.1| Flagellar basal body-associated protein FliL [Oceanobacter sp. RED65] Length = 177 Score = 36.2 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 35/141 (24%), Gaps = 18/141 (12%) Query: 17 ISFYMLFLRSMDTMVENHVPPLAIKNTN------------IIKSELVSIPSVSNGVLQAY 64 + L + E +K + I + G Q Y Sbjct: 35 GGGVGVTLFLLGGDDEVAEEAAVEGEEAEAAEAAPPAPAIYVKFKPEFIVNYQVGPRQRY 94 Query: 65 FLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIK-AFGF-DNLRKKIKE 119 + + + D + + LLS + D L+++++ Sbjct: 95 LQIYMEAMTRDPAIADALEQHSPMIRSSIINLLSQQDYAYLRTAEGRANLRDILKQEVQR 154 Query: 120 DLNSRLG-SQFISEVLIDELN 139 L G + E+L Sbjct: 155 LLAQETGIEDGLKEILFTNFV 175 >gi|256846805|ref|ZP_05552260.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] gi|256717771|gb|EEU31329.1| conserved hypothetical protein [Fusobacterium sp. 3_1_36A2] Length = 274 Score = 36.2 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 16/123 (13%), Positives = 37/123 (30%), Gaps = 12/123 (9%) Query: 3 KFLFSGIW--ISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 K + GI I ++ L Y + + M ++ + II+ +P Sbjct: 96 KIIKIGIVALIILLCLGGGYFAYSKFMVRDESENLAGNTVTE-EIIEESPQEVPIKEANN 154 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 + +V+ QE + + D + D + + + ++ Sbjct: 155 ITETPIVEPVAENFQEQEEVKEEPVIEDK-------NTVED--DLDLIVLETVYDEVINK 205 Query: 121 LNS 123 N Sbjct: 206 GNE 208 >gi|271500080|ref|YP_003333105.1| flagellar basal body-associated protein FliL [Dickeya dadantii Ech586] gi|270343635|gb|ACZ76400.1| flagellar basal body-associated protein FliL [Dickeya dadantii Ech586] Length = 162 Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 15/107 (14%), Positives = 32/107 (29%), Gaps = 18/107 (16%) Query: 44 NIIKSELVSIPSVS-NGVLQAYFLVKLSFIVNDSQERSYLK---EIATDYLYTLLSGPPM 99 + + ++ +S + V ++ + D R+ L L L S Sbjct: 59 VFMPLDTFTVNLLSPDNNPDRVLYVGITLRLPDEATRARLTNYLPEIRSRLIMLFSRQSS 118 Query: 100 GDFVQIKAFGFDNLRKKIKEDLNSRLGSQ--------FISEVLIDEL 138 + ++K+ ED+ L +S+VL Sbjct: 119 SVLATEQG------KQKLVEDIKQVLSPPLVPGQPNQVVSDVLFTAF 159 >gi|295706275|ref|YP_003599350.1| flagellar basal body-associated protein FliL [Bacillus megaterium DSM 319] gi|294803934|gb|ADF41000.1| flagellar basal body-associated protein FliL [Bacillus megaterium DSM 319] Length = 143 Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 16/138 (11%), Positives = 47/138 (34%), Gaps = 10/138 (7%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K + + ++++ I+ + + E ++IK+ + +N Sbjct: 9 KMIIIMLSLTLIGSIAVIVTLKYT-----EQASTEKGPSIDDVIKASVDVTDIKTNLKSN 63 Query: 63 AYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 Y + ++ + + L++ D + LS DF + G L I + Sbjct: 64 NYISISFKIQMDSKKAAAELQKRDFQVRDIIIKRLSDMSAQDFEGTQ--GLSALETDIAK 121 Query: 120 DLNSRLGSQFISEVLIDE 137 ++ + + + ++ Sbjct: 122 QIDQLMENGHVVKIYTTS 139 >gi|313672770|ref|YP_004050881.1| flagellar basal body-associated protein flil [Calditerrivibrio nitroreducens DSM 19672] gi|312939526|gb|ADR18718.1| flagellar basal body-associated protein FliL [Calditerrivibrio nitroreducens DSM 19672] Length = 131 Score = 35.8 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 17/85 (20%), Positives = 33/85 (38%), Gaps = 1/85 (1%) Query: 55 SVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKA-FGFDNL 113 + + Y ++ + S+E+S L T + + D +K+ G + + Sbjct: 43 VIVSTSGNEYKSANINLYLELSEEKSALLVEEDRKRITAMISEALVDSKDVKSPAGKEEM 102 Query: 114 RKKIKEDLNSRLGSQFISEVLIDEL 138 + KIK LNS G + +V Sbjct: 103 KLKIKRVLNSYYGKDIVKDVYFTYF 127 >gi|157283871|ref|YP_001468139.1| flagellar basal body-associated protein FliL [Kineococcus radiotolerans SRS30216] gi|151363013|gb|ABS06015.1| flagellar basal body-associated protein FliL [Kineococcus radiotolerans SRS30216] Length = 166 Score = 35.8 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 16/131 (12%), Positives = 37/131 (28%), Gaps = 17/131 (12%) Query: 22 LFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSF-----IVNDS 76 ++ + A++ ++ + +S+ Y V ++ Sbjct: 38 TYMLTKPAAAATETVEEALEPGEVVALDPISVNLPDG----HYLKVGIALQTVLDESAGE 93 Query: 77 QERSYLKEIATDYLYTLLSGPPMGDFVQIK--AFGFDNLRKKIKEDLNSRLGSQ------ 128 + A D SG PM D + D L++KI E + Sbjct: 94 GSSAPDGSKALDLTIKEFSGKPMADLSNPELRQKYQDELQEKIIEAYTKEPAKEGDPATK 153 Query: 129 FISEVLIDELN 139 + + + + Sbjct: 154 TVMGIYLTQFV 164 >gi|209966297|ref|YP_002299212.1| hypothetical protein RC1_3034 [Rhodospirillum centenum SW] gi|209959763|gb|ACJ00400.1| hypothetical protein RC1_3034 [Rhodospirillum centenum SW] Length = 136 Score = 35.8 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 16/95 (16%), Positives = 35/95 (36%), Gaps = 7/95 (7%) Query: 46 IKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY-----LKEIATDYLYTLLSGPPMG 100 I+ S+P + + +L D L+ L LS Sbjct: 38 IRLTPFSLP-GKDRFSYVQLVAELVVREGDEAAVEVQQVQNLRPRIIGRLTEALSAERFM 96 Query: 101 DFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLI 135 + A +L++++++ +N +G+ + +VLI Sbjct: 97 S-RSVSAAEVLHLKERLRDLVNDAIGAPMVEDVLI 130 >gi|307318917|ref|ZP_07598348.1| flagellar basal body-associated protein FliL [Sinorhizobium meliloti AK83] gi|306895331|gb|EFN26086.1| flagellar basal body-associated protein FliL [Sinorhizobium meliloti AK83] Length = 163 Score = 35.8 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 17/150 (11%), Positives = 40/150 (26%), Gaps = 21/150 (14%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNI---------------IKSE 49 + + +++V ++ + E + ++ + Sbjct: 18 IAAVAVLTLVAGGGGWLAGMLLAPPPAEKTEAAAELPANATGEEDIPKIAAVAHGIVQLD 77 Query: 50 LVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFG 109 ++ V L F D L E + L + + G Sbjct: 78 PITTNLAYPAENWVRLEVALQF---DGAPDVALAETIHQDIAAYLKTVSLQQIQGPR--G 132 Query: 110 FDNLRKKIKEDLNSRLGSQFISEVLIDELN 139 F LR I+E ++ R ++ V+ Sbjct: 133 FQYLRDDIQERVDLR-SEGRVTNVMFRTFV 161 >gi|308812404|ref|XP_003083509.1| chloroplast phytoene desaturase precursor (ISS) [Ostreococcus tauri] gi|116055390|emb|CAL58058.1| chloroplast phytoene desaturase precursor (ISS) [Ostreococcus tauri] Length = 1546 Score = 35.8 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 22/144 (15%), Positives = 53/144 (36%), Gaps = 23/144 (15%) Query: 43 TNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDF 102 T +++ +P ++ G Q Y + V + +++++ + +D L+ + DF Sbjct: 1191 TEKLRTGAPLVPMLAGG--QGYIDAQDELSVEEWMKKNFMPKRVSDELFIAM--GKALDF 1246 Query: 103 VQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD-------MRSNCLRLGS 155 + + + + +N GS+ +L M+ + R+G Sbjct: 1247 IDVDKLSMTVILTAMNRFINETHGSKT---------AFLDGNQPDRLCAPMKEHIERVGG 1297 Query: 156 NASDLMTQKGSL---IEKNKEPLK 176 + T + +E N E +K Sbjct: 1298 GEVMVDTPMQEILTDVEGNVEGVK 1321 >gi|300727569|ref|ZP_07060959.1| hypothetical protein PBR_0572 [Prevotella bryantii B14] gi|299775158|gb|EFI71760.1| hypothetical protein PBR_0572 [Prevotella bryantii B14] Length = 236 Score = 35.8 bits (81), Expect = 2.7, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 39/126 (30%), Gaps = 6/126 (4%) Query: 6 FSGIWISVVTLISFYMLFLRSMDTMVE-----NHVPPLAIKNTNIIKSELVSIPSVSNGV 60 + VV + R + +T + + +PS + Sbjct: 109 VITAALVVVIAGVCWFFMSRKTPNTPQSNQNTPQPTQQPSASTPNVPTSSQQVPSSDDID 168 Query: 61 LQ-AYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 ++ A V+ D+ L +++ + V+I+ + +++I E Sbjct: 169 VKVAVAEVEHLIAEIDNTTDKVKLPSIYRKLMSIVYKLEKINGVEIQGIPIEIAKQRILE 228 Query: 120 DLNSRL 125 + RL Sbjct: 229 NYRKRL 234 >gi|148554214|ref|YP_001261796.1| flagellar basal body-associated protein FliL [Sphingomonas wittichii RW1] gi|148499404|gb|ABQ67658.1| flagellar basal body-associated protein FliL [Sphingomonas wittichii RW1] Length = 199 Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 13/125 (10%), Positives = 32/125 (25%), Gaps = 6/125 (4%) Query: 18 SFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQ 77 + + + P E ++ + + + +S D + Sbjct: 72 GGHGEKKTLPMGLETDASPDPTKYKATFYTFEQPFTSNLRDSDGFSQVGLGVS-TYYDQK 130 Query: 78 ERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAF--GFDNLRKKIKEDLNSRLGSQFISE 132 LK+ + +++ + +L+ I + L R G I Sbjct: 131 VLDNLKDNEMPIRSAILMVMAQQDSFTISTPEGKVKLQKDLKAAINDVLRQRTGFGGIDN 190 Query: 133 VLIDE 137 V Sbjct: 191 VYFTS 195 >gi|220979967|emb|CAP72159.1| Putative DNA polymerase III alpha subunit [Escherichia coli LF82] Length = 1168 Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 4/89 (4%) Query: 90 LYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149 L+ P D R ++ E LN R G +++ I YL + Sbjct: 404 LFERFINPERLDLPDADLDFSQARRHEVIEYLNERYGEDYVAG--IPNFTYLGAASALRD 461 Query: 150 CLRLGS--NASDLMTQKGSLIEKNKEPLK 176 R+ +A ++++ +E + PL+ Sbjct: 462 TARIYGVESADMAVSKELKNVEDDSLPLE 490 >gi|148380608|ref|YP_001255149.1| flagellar basal body-associated protein [Clostridium botulinum A str. ATCC 3502] gi|170754868|ref|YP_001782267.1| flagellar basal body-associated protein FliL [Clostridium botulinum B1 str. Okra] gi|148290092|emb|CAL84211.1| putative flagellar basal body-associated protein [Clostridium botulinum A str. ATCC 3502] gi|169120080|gb|ACA43916.1| flagellar basal body-associated protein FliL [Clostridium botulinum B1 str. Okra] Length = 173 Score = 35.4 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 49/147 (33%), Gaps = 26/147 (17%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVS--------------------IP 54 +F L + + N + + NTN+I S+ + + Sbjct: 27 GAGAFGGYMLFAKNKKNANSANQMPVNNTNVINSQQTNDGMYPQQVVVSSKTYSLDEFLV 86 Query: 55 SVSNGVLQAYFLVKL---SFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFD 111 ++++ + + K+ ++E K I D + +L D D Sbjct: 87 NLADEDGKRFVKAKIFIGYEEKKLAKELEKKKPILRDAVIGVLRSKKAADI---NPKNID 143 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDEL 138 ++ +I ++ L IS + D+L Sbjct: 144 KIKVEIINKISPMLEKGRISSIYFDDL 170 >gi|289523561|ref|ZP_06440415.1| flagellar basal body-associated protein FliL [Anaerobaculum hydrogeniformans ATCC BAA-1850] gi|289503253|gb|EFD24417.1| flagellar basal body-associated protein FliL [Anaerobaculum hydrogeniformans ATCC BAA-1850] Length = 151 Score = 35.4 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 13/124 (10%), Positives = 28/124 (22%), Gaps = 13/124 (10%) Query: 24 LRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLK 83 + K ++ ++ L ++D + + Sbjct: 29 KFFGKPQPLDGSYKEIAKPGAMLPLGDFTVNL--ADKDPHIVRFNLVLELSDPTFLTTIS 86 Query: 84 E-----IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF----ISEVL 134 E + + D L + I + LN+ L + VL Sbjct: 87 EQGWISRIKNEIILTCKNRYYDDLRTADGVL--ALAQDISKRLNTILPPVKDKLPVRNVL 144 Query: 135 IDEL 138 E Sbjct: 145 FQEF 148 >gi|226950063|ref|YP_002805154.1| flagellar basal body-associated protein FliL [Clostridium botulinum A2 str. Kyoto] gi|226844467|gb|ACO87133.1| flagellar basal body-associated protein FliL [Clostridium botulinum A2 str. Kyoto] Length = 173 Score = 35.4 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 22/147 (14%), Positives = 49/147 (33%), Gaps = 26/147 (17%) Query: 15 TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVS--------------------IP 54 +F L + + N + + NTN+I S+ + + Sbjct: 27 GAGAFGGYMLFAKNKKNANSANQMPVNNTNVINSQQTNDGMYPQQVVVSSKTYSLDEFLV 86 Query: 55 SVSNGVLQAYFLVKL---SFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFD 111 ++++ + + K+ ++E K I D + +L D D Sbjct: 87 NLADEDGKRFVKAKIFIGYEEKKLAKELEKKKPILRDAVIGVLRSKKAADI---NPKNID 143 Query: 112 NLRKKIKEDLNSRLGSQFISEVLIDEL 138 ++ +I ++ L IS + D+L Sbjct: 144 KIKVEIINKISPMLEKGRISSIYFDDL 170 >gi|302342467|ref|YP_003806996.1| radical SAM domain protein [Desulfarculus baarsii DSM 2075] gi|301639080|gb|ADK84402.1| Radical SAM domain protein [Desulfarculus baarsii DSM 2075] Length = 556 Score = 35.4 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 13/80 (16%), Positives = 28/80 (35%), Gaps = 7/80 (8%) Query: 83 KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL-------GSQFISEVLI 135 D +Y G F + K + + ++R+ G +++ I Sbjct: 307 DPRVVDEMYRSGVGLFNLAFESTSDRTLRRIGKALTTEESARVIELVRQRGDGYVTGFFI 366 Query: 136 DELNYLSIVDMRSNCLRLGS 155 + ++ D+R N R G+ Sbjct: 367 SGFPFETMADVRDNLDRAGA 386 >gi|293411935|ref|ZP_06654660.1| conserved hypothetical protein [Escherichia coli B354] gi|291469490|gb|EFF11979.1| conserved hypothetical protein [Escherichia coli B354] Length = 1172 Score = 35.4 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 4/89 (4%) Query: 90 LYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149 L+ P D R ++ E LN R G +++ I YL + Sbjct: 404 LFERFINPERLDLPDADLDFSQARRHEVIEYLNERYGEDYVAG--IPNFTYLGAASALRD 461 Query: 150 CLRLGS--NASDLMTQKGSLIEKNKEPLK 176 R+ +A ++++ +E + PL+ Sbjct: 462 TARIYGVESADMAVSKELKNVEDDSLPLE 490 >gi|317048605|ref|YP_004116253.1| flagellar basal body-associated protein FliL [Pantoea sp. At-9b] gi|316950222|gb|ADU69697.1| flagellar basal body-associated protein FliL [Pantoea sp. At-9b] Length = 161 Score = 35.4 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 14/144 (9%), Positives = 35/144 (24%), Gaps = 13/144 (9%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL-Q 62 L + V + + + + E + ++ V+ Sbjct: 19 LLIVTLAACSVAGYAVWRMMNKHEGDKPEVAKVEPPPAPV-FFAMDTFTVNLVNPDNDPD 77 Query: 63 AYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN 122 V + + D R L + + LL A + ++ + + + Sbjct: 78 RVLYVGFTLRLPDEDTRRRLNDYLPEVRSRLLLLLSRQ---SAAALATEQGKQALVDQIK 134 Query: 123 SRLGSQFIS--------EVLIDEL 138 L + +VL Sbjct: 135 QVLAPPLVKGQPPQVVSDVLFTAF 158 >gi|309797648|ref|ZP_07692035.1| DNA polymerase III, alpha subunit [Escherichia coli MS 145-7] gi|308118745|gb|EFO56007.1| DNA polymerase III, alpha subunit [Escherichia coli MS 145-7] Length = 787 Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 4/89 (4%) Query: 90 LYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149 L+ P D R ++ E LN R G +++ I YL + Sbjct: 404 LFERFINPERLDLPDADLDFSQARRHEVIEYLNERYGEDYVAG--IPNFTYLGAASALRD 461 Query: 150 CLRLGS--NASDLMTQKGSLIEKNKEPLK 176 R+ +A ++++ +E + PL+ Sbjct: 462 TARIYGVESADMAVSKELKNVEDDSLPLE 490 >gi|323934241|gb|EGB30665.1| bacterial DNA polymerase III alpha [Escherichia coli E1520] Length = 787 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 17/89 (19%), Positives = 33/89 (37%), Gaps = 4/89 (4%) Query: 90 LYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVDMRSN 149 L+ P D R ++ E LN R G +++ I YL + Sbjct: 404 LFERFINPERLDLPDADLDFSQARRHEVIEYLNERYGEDYVAG--IPNFTYLGAASALRD 461 Query: 150 CLRLGS--NASDLMTQKGSLIEKNKEPLK 176 R+ +A ++++ +E + PL+ Sbjct: 462 TARIYGVESADMAVSKELKNVEDDSLPLE 490 >gi|156049807|ref|XP_001590870.1| hypothetical protein SS1G_08611 [Sclerotinia sclerotiorum 1980] gi|154693009|gb|EDN92747.1| hypothetical protein SS1G_08611 [Sclerotinia sclerotiorum 1980 UF-70] Length = 640 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 16/122 (13%), Positives = 31/122 (25%), Gaps = 15/122 (12%) Query: 1 MLKFLFSGIWISVV--------TLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVS 52 M+K G+ + + TL S Y V + L + S Sbjct: 423 MIKLALPGLVMVLAEYLAFEVLTLASSYFSVTHLAAQSVLTTITALTFQI-------PFS 475 Query: 53 IPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDN 112 I ++ + LS S + + L ++ D Sbjct: 476 ISIAASTRVANLIGATLSDAAKTSSKVAIYAACIVGLFNFTLISSLRNIVPRLFTDDLDV 535 Query: 113 LR 114 ++ Sbjct: 536 IK 537 >gi|78777351|ref|YP_393666.1| flagellar basal body-associated protein FliL [Sulfurimonas denitrificans DSM 1251] gi|78497891|gb|ABB44431.1| Flagellar basal body-associated protein FliL [Sulfurimonas denitrificans DSM 1251] Length = 168 Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats. Identities = 15/101 (14%), Positives = 31/101 (30%), Gaps = 10/101 (9%) Query: 44 NIIKSELVSIPSVSNGVLQAYFLV------KLSFIVNDSQERSYLKEIATDYLYTLLSGP 97 + + + + L A + +F+ N E I D + Sbjct: 69 SEVNLGDFVFNVLGDKKLIANISIIHKPKNGKTFMDNSGDEFIEKGAILRDATINAMLDS 128 Query: 98 PMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 D + + ++ IK LN L + + EV ++ Sbjct: 129 QNFDM----SVNNNKIKDAIKNRLNKNLQNSSVEEVYFNKF 165 >gi|110800185|ref|YP_695010.1| ABC transporter, solute-binding protein [Clostridium perfringens ATCC 13124] gi|110674832|gb|ABG83819.1| ABC transporter, solute-binding protein [Clostridium perfringens ATCC 13124] Length = 461 Score = 35.0 bits (79), Expect = 3.8, Method: Composition-based stats. Identities = 13/121 (10%), Positives = 37/121 (30%), Gaps = 3/121 (2%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K + V + + + + + +++ P + + +++ I G + Sbjct: 4 KLVKMLTVACVTAIAASAFVGCGNKEEAPKDNEKPSTEQAEGSGEKKVLEIAVFEGGFGK 63 Query: 63 AY---FLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 Y + D + + D + LS DF+ + + + + Sbjct: 64 DYWDACIDAFEAEHPDVEVKMEANPKIGDIIRPKLSSENTPDFIYLSTNDQSGIANALIK 123 Query: 120 D 120 D Sbjct: 124 D 124 >gi|319744314|gb|EFV96678.1| hypothetical protein HMPREF9171_1822 [Streptococcus agalactiae ATCC 13813] Length = 495 Score = 35.0 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 13/145 (8%) Query: 35 VPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLL 94 P ++ +++ ++ +K DS Y+K+ D + + Sbjct: 11 EPEKETDGLEFKDAKEMTV----EEAVRKDSEIKAGITEEDSILDKYIKQH-RDEVASQK 65 Query: 95 SGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVL--------IDELNYLSIVDM 146 DF + D+ KK +E+L++ L ++ +S+ L E N +S + Sbjct: 66 FETKSSDFANLDTASLDDFIKKQREELSAMLAAEELSKKLDNSVSQEQDTEANAVSPKEE 125 Query: 147 RSNCLRLGSNASDLMTQKGSLIEKN 171 S + + Sbjct: 126 SSQEQENSVTPVPPLITEAEPTATE 150 >gi|255102653|ref|ZP_05331630.1| putative transcription antiterminator [Clostridium difficile QCD-63q42] Length = 633 Score = 35.0 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 10/84 (11%), Positives = 29/84 (34%), Gaps = 3/84 (3%) Query: 64 YFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAF---GFDNLRKKIKED 120 Y V + + N S + Y +++ D L + + + + L+ K K+ Sbjct: 215 YIRVSMRVVGNASDLKLYTEDLIIDKLLDKIFRDKKYNLNYDEKYYLKELIKLKTKDKKA 274 Query: 121 LNSRLGSQFISEVLIDELNYLSIV 144 + + +++ + + Sbjct: 275 TIKNIDKNKLQDIMFEFFREIDKK 298 >gi|168216359|ref|ZP_02641984.1| ABC transporter, solute-binding protein [Clostridium perfringens NCTC 8239] gi|182381356|gb|EDT78835.1| ABC transporter, solute-binding protein [Clostridium perfringens NCTC 8239] Length = 461 Score = 35.0 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 13/121 (10%), Positives = 37/121 (30%), Gaps = 3/121 (2%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K + V + + + + + +++ P + + +++ I G + Sbjct: 4 KLVKMLTVACVTAIAASAFVGCGNKEEAPKDNEKPSTEQAEGSGEKKVLEIAVFEGGFGK 63 Query: 63 AY---FLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 Y + D + + D + LS DF+ + + + + Sbjct: 64 DYWDACIDAFEAEHPDVEVKMEANPKIGDIIRPKLSSENTPDFIYLSTNDQSGIANALIK 123 Query: 120 D 120 D Sbjct: 124 D 124 >gi|237740866|ref|ZP_04571347.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] gi|229431163|gb|EEO41375.1| conserved hypothetical protein [Fusobacterium sp. 4_1_13] Length = 274 Score = 35.0 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 12/119 (10%), Positives = 35/119 (29%), Gaps = 10/119 (8%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAY 64 + + I ++ L Y + + + ++ + II+ +P + Sbjct: 100 IGIAVLIILLCLGGGYFAYSKFIANNESENLAGNTVTE-EIIEENPQEVPIKEANNITET 158 Query: 65 FLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNS 123 +V+ QE + + D + D + + + ++ N Sbjct: 159 PIVEPVAENFQEQEEVKEEPVIEDK-------NTVED--DLDLIVLETVYDEVINKGNE 208 >gi|154250208|ref|YP_001411033.1| flagellar basal body-associated protein FliL [Fervidobacterium nodosum Rt17-B1] gi|154154144|gb|ABS61376.1| flagellar basal body-associated protein FliL [Fervidobacterium nodosum Rt17-B1] Length = 174 Score = 35.0 bits (79), Expect = 4.1, Method: Composition-based stats. Identities = 17/130 (13%), Positives = 40/130 (30%), Gaps = 7/130 (5%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKN---TNIIKSELVSIPSVSN 58 LK + + +S+V ++ + L ++ + + +I++ + Sbjct: 23 LKLVGIPLIVSLVVTLAVFFLLGQNKQPQQQQEQQQVTAPTQIKAVVIQAGKFQTFMLKG 82 Query: 59 GVLQAYF--LVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK 116 G L L + + D L + + L+K+ Sbjct: 83 GRDVVVIDSLTLLVGSEPCRAAVAEKNDEIMDALSIIFLSKERFELTTPAGIDL--LKKQ 140 Query: 117 IKEDLNSRLG 126 I+E +N G Sbjct: 141 IREAVNEITG 150 >gi|285018174|ref|YP_003375885.1| flagellar basal body-associated protein flil [Xanthomonas albilineans GPE PC73] gi|283473392|emb|CBA15897.1| probable flagellar basal body-associated protein flil [Xanthomonas albilineans] Length = 175 Score = 35.0 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 35/126 (27%), Gaps = 12/126 (9%) Query: 26 SMDTMVENHVPPLAIK-----NTNIIKSELVSIPSVSNGVLQA--YFLVKLSFIVNDSQE 78 H A E + +++ G Y +++ + D +E Sbjct: 48 KKPEAGAGHEKAEAKAAEVPKPAQYFAMEPAFVVNLNGGPQDGPHYLQLEVQLMTRDPEE 107 Query: 79 RSYLK---EIATDYLYTLLSGPPMGDFVQIK--AFGFDNLRKKIKEDLNSRLGSQFISEV 133 + +L L S D I ++ ++ + S G + + E+ Sbjct: 108 LKLITENAPAIRAHLLMLFSQVKAQDITDIAGRKKLQESALADAQKLMTSETGKKCVEEL 167 Query: 134 LIDELN 139 L Sbjct: 168 LFTSFV 173 >gi|77413307|ref|ZP_00789502.1| conserved hypothetical protein [Streptococcus agalactiae 515] gi|77160621|gb|EAO71737.1| conserved hypothetical protein [Streptococcus agalactiae 515] Length = 487 Score = 35.0 bits (79), Expect = 4.3, Method: Composition-based stats. Identities = 21/145 (14%), Positives = 47/145 (32%), Gaps = 13/145 (8%) Query: 35 VPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLL 94 P ++ +++ ++ +K DS Y+K+ D + + Sbjct: 11 EPEKETDGLEFKDAKEMTV----EEAVRKDSEIKAGITEEDSILDKYIKQH-RDEVASQK 65 Query: 95 SGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVL--------IDELNYLSIVDM 146 DF + D+ KK +E+L++ L ++ +S+ L E N +S + Sbjct: 66 FETKSSDFANLDTASLDDFIKKQREELSAMLAAEELSKKLDNSVSQEQDTEANAVSPKEE 125 Query: 147 RSNCLRLGSNASDLMTQKGSLIEKN 171 S + + Sbjct: 126 SSQEQENSVTPVPPLITEAEPTATE 150 >gi|126701070|ref|YP_001089967.1| putative transcription antiterminator [Clostridium difficile 630] gi|115252507|emb|CAJ70350.1| Transcription antiterminator, PTS operon regulator [Clostridium difficile] Length = 633 Score = 35.0 bits (79), Expect = 4.4, Method: Composition-based stats. Identities = 10/84 (11%), Positives = 28/84 (33%), Gaps = 3/84 (3%) Query: 64 YFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAF---GFDNLRKKIKED 120 Y V + N S + Y +++ D L + + + + L+ K K+ Sbjct: 215 YIRVSMRVAGNASDLKLYTEDLIIDKLLDKIFRDKKYNLNYDEKYYLKELIKLKTKDKKA 274 Query: 121 LNSRLGSQFISEVLIDELNYLSIV 144 + + +++ + + Sbjct: 275 TIKNIDKNKLQDIMFEFFREIDKK 298 >gi|283785714|ref|YP_003365579.1| flagellar protein FliL [Citrobacter rodentium ICC168] gi|282949168|emb|CBG88776.1| flagellar protein FliL [Citrobacter rodentium ICC168] Length = 155 Score = 35.0 bits (79), Expect = 4.5, Method: Composition-based stats. Identities = 14/140 (10%), Positives = 33/140 (23%), Gaps = 6/140 (4%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 L L + T Y + + + ++ ++ + Sbjct: 16 LPLLVIITLAACATAGYSYWRMQQQPTAAAQEAP--PPPPAPVFFALDTFTV-NLGDADR 72 Query: 62 QAYFLVKLSFI-VNDSQERSYLKEIATDYLYTLLSGPPMGDFV--QIKAFGFDNLRKKIK 118 Y + L + L L S K +++ + Sbjct: 73 VLYIGITLRLKDEATRARLNEYLPEVRSRLLLLFSRQDAAVLATEDGKQQLIAAIKETLS 132 Query: 119 EDLNSRLGSQFISEVLIDEL 138 L + Q +++VL Sbjct: 133 PPLVAGQPKQVVTDVLYTAF 152 >gi|315125998|ref|YP_004068001.1| LafF [Pseudoalteromonas sp. SM9913] gi|315014512|gb|ADT67850.1| LafF [Pseudoalteromonas sp. SM9913] Length = 143 Score = 35.0 bits (79), Expect = 4.6, Method: Composition-based stats. Identities = 22/143 (15%), Positives = 45/143 (31%), Gaps = 10/143 (6%) Query: 1 MLKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV 60 M K + + I+++ F D+ P I + E I S Sbjct: 1 MKKIIIALTVIALIAAAFF--AGQFFNDSDSSKEGPQADITKVEYHEMERFIISV-SEDS 57 Query: 61 LQAYFLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 + Y ++ L + + S ++ + + L + + D ++K + Sbjct: 58 IARYLVLDLVLVTSPSVYNTGTEAMEPLVRNVLVKQFANMSHSQ-AKAAFKDIDAVQKNL 116 Query: 118 KEDLNSRLGSQF---ISEVLIDE 137 E N L + + VLI Sbjct: 117 LEQFNLVLANTVSVRLDNVLITN 139 >gi|329664134|ref|NP_001192610.1| RUN domain-containing protein 1 [Bos taurus] gi|297487144|ref|XP_002696048.1| PREDICTED: RUN domain containing 1-like [Bos taurus] gi|296476430|gb|DAA18545.1| RUN domain containing 1-like [Bos taurus] Length = 613 Score = 34.6 bits (78), Expect = 4.8, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 24/67 (35%), Gaps = 7/67 (10%) Query: 85 IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIV 144 + D L L D + + LR+++ + + + E L+++L Sbjct: 220 VIIDELIKKLDMNLNEDLSSLST---EELRQRVDAAVAQIVNPARVKEQLVEQL----KT 272 Query: 145 DMRSNCL 151 +R + Sbjct: 273 QIRDLEM 279 >gi|293569947|ref|ZP_06681034.1| low affinity penicillin-binding protein 5 [Enterococcus faecium E1071] gi|291587695|gb|EFF19572.1| low affinity penicillin-binding protein 5 [Enterococcus faecium E1071] Length = 678 Score = 34.6 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 17/129 (13%), Positives = 33/129 (25%), Gaps = 23/129 (17%) Query: 6 FSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYF 65 +G I + T Y + +T + + +++ G Sbjct: 16 IAGAVILIATAGGGYFYYQHYQETQAVEAGEKTVEQ----------FVQALNKGDYNKAA 65 Query: 66 LVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKK-------IK 118 + N S D Y + G D ++ +K K Sbjct: 66 EMTSKKAANKSALSEK---EILDK-YQNIYG--AADVKGLQISNLKVDKKDDSTYSFSYK 119 Query: 119 EDLNSRLGS 127 +N+ LG Sbjct: 120 AKMNTSLGE 128 >gi|126307912|ref|XP_001364813.1| PREDICTED: hypothetical protein [Monodelphis domestica] Length = 642 Score = 34.6 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 24/67 (35%), Gaps = 7/67 (10%) Query: 85 IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIV 144 + D L L D + + LR+++ + + + E L+++L Sbjct: 253 VIIDELIKKLDMNLNEDISSLS---PEELRQRVDAAVAQIVNPARVKEQLVEQL----KT 305 Query: 145 DMRSNCL 151 +R + Sbjct: 306 QIRDLEM 312 >gi|254977071|ref|ZP_05273543.1| putative transcription antiterminator [Clostridium difficile QCD-66c26] gi|255094399|ref|ZP_05323877.1| putative transcription antiterminator [Clostridium difficile CIP 107932] gi|255316151|ref|ZP_05357734.1| putative transcription antiterminator [Clostridium difficile QCD-76w55] gi|255651991|ref|ZP_05398893.1| putative transcription antiterminator [Clostridium difficile QCD-37x79] gi|260684952|ref|YP_003216237.1| putative transcription antiterminator [Clostridium difficile CD196] gi|260688610|ref|YP_003219744.1| putative transcription antiterminator [Clostridium difficile R20291] gi|306521734|ref|ZP_07408081.1| putative transcription antiterminator [Clostridium difficile QCD-32g58] gi|260211115|emb|CBA66524.1| putative transcription antiterminator [Clostridium difficile CD196] gi|260214627|emb|CBE07224.1| putative transcription antiterminator [Clostridium difficile R20291] Length = 633 Score = 34.6 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 10/84 (11%), Positives = 29/84 (34%), Gaps = 3/84 (3%) Query: 64 YFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAF---GFDNLRKKIKED 120 Y V + + N S + Y +++ D L + + + + L+ K K+ Sbjct: 215 YIRVSMRVVGNASNLKLYTEDLIIDKLLDKIFRDKKYNLNYDEKYYLKELIKLKTKDKKA 274 Query: 121 LNSRLGSQFISEVLIDELNYLSIV 144 + + +++ + + Sbjct: 275 TIKNIDKNKLQDIMFEFFREIDKK 298 >gi|114570495|ref|YP_757175.1| flagellar basal body-associated protein FliL [Maricaulis maris MCS10] gi|114340957|gb|ABI66237.1| flagellar basal body-associated protein FliL [Maricaulis maris MCS10] Length = 196 Score = 34.6 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 15/93 (16%), Positives = 28/93 (30%), Gaps = 5/93 (5%) Query: 49 ELVSIPSVSNGVLQAYFLVKLSFIVNDSQE---RSYLKEIATDYLYTLLSGPPMGDFVQI 105 E ++ S +K+SF + S + D L D Sbjct: 102 ETITTNIRSVTGRPVIVQLKISFESSRSDLGPILEEHYDPVMDQFIMFLRELREDDL--Y 159 Query: 106 KAFGFDNLRKKIKEDLNSRLGSQFISEVLIDEL 138 + G ++ ++ +N + I V I E Sbjct: 160 GSAGMHRVKLELLRRVNLAIEPDQIDAVWIQEF 192 >gi|294500929|ref|YP_003564629.1| flagellar basal body-associated protein FliL [Bacillus megaterium QM B1551] gi|294350866|gb|ADE71195.1| flagellar basal body-associated protein FliL [Bacillus megaterium QM B1551] Length = 143 Score = 34.6 bits (78), Expect = 5.1, Method: Composition-based stats. Identities = 15/138 (10%), Positives = 46/138 (33%), Gaps = 10/138 (7%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K + + ++++ I+ + + ++IK+ + +N Sbjct: 9 KMIIIMLSLTLIGSIAVIVTLKYTG-----QASTEKGPSIDDVIKASVDVTDIKTNLKSN 63 Query: 63 AYFLVKLSFIVNDSQERSYLKEI---ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKE 119 Y + ++ + + L++ D + LS DF + G L I + Sbjct: 64 NYISISFKIQMDSKKAAAELQKRDFQVRDIIIKRLSDMSAQDFEGTQ--GLSTLETDIAK 121 Query: 120 DLNSRLGSQFISEVLIDE 137 ++ + + + ++ Sbjct: 122 QIDQLMENGHVVKIYTTS 139 >gi|332260758|ref|XP_003279447.1| PREDICTED: RUN domain-containing protein 1 [Nomascus leucogenys] Length = 632 Score = 34.6 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 15/126 (11%), Positives = 39/126 (30%), Gaps = 7/126 (5%) Query: 26 SMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSYLKEI 85 D + ++ + EL+ L+ + + S+ + + Sbjct: 178 GEDQGLSEQEKQERLETQREKQKELILQLKTQLDDLETFAYQEGSYDSLPQSVVLERQRV 237 Query: 86 ATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIVD 145 D L L D + + LR+++ + + + E L+++L Sbjct: 238 IIDELIKKLDMNLNEDISSLST---EELRQRVDTAVAQIVNPARVKEQLVEQL----KTQ 290 Query: 146 MRSNCL 151 +R + Sbjct: 291 IRDLEM 296 >gi|50760793|ref|XP_418133.1| PREDICTED: hypothetical protein [Gallus gallus] Length = 549 Score = 34.6 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 27/82 (32%), Gaps = 7/82 (8%) Query: 70 SFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF 129 S+ + + D L L D + + LR+++ + + Sbjct: 145 SYDSLPQSVVMERQRMIIDELIKKLDMNLSEDIATLS---PEELRQRVDAAIAQIVNPAR 201 Query: 130 ISEVLIDELNYLSIVDMRSNCL 151 + E L+++L +R + Sbjct: 202 VKEQLVEQL----KTQIRDLEM 219 >gi|221632404|ref|YP_002521625.1| hypothetical protein trd_0376 [Thermomicrobium roseum DSM 5159] gi|221155856|gb|ACM04983.1| Domain of unknown function domain protein [Thermomicrobium roseum DSM 5159] Length = 137 Score = 34.6 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 13/70 (18%), Positives = 32/70 (45%) Query: 76 SQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLI 135 + + +D L L G + ++ F D++R+++K+ ++ LG ++ LI Sbjct: 3 GTKGRDPMQKRSDDLARRLFGDSTTEGGEMAKFTEDDVRERLKQVIDPELGVDVVNLGLI 62 Query: 136 DELNYLSIVD 145 ++ + D Sbjct: 63 YGIDLIDRED 72 >gi|291406185|ref|XP_002719463.1| PREDICTED: RUN domain containing 1 [Oryctolagus cuniculus] Length = 613 Score = 34.3 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 10/67 (14%), Positives = 24/67 (35%), Gaps = 7/67 (10%) Query: 85 IATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNYLSIV 144 + D L L D + + LR+++ + + + E L+++L Sbjct: 220 VIIDELIKKLDMNLNEDISSLS---MEELRQRVDAAVAQIVNPARVKEQLVEQL----KT 272 Query: 145 DMRSNCL 151 +R + Sbjct: 273 QIRDLEM 279 >gi|34762938|ref|ZP_00143918.1| hypothetical protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] gi|27887399|gb|EAA24489.1| hypothetical protein [Fusobacterium nucleatum subsp. vincentii ATCC 49256] Length = 265 Score = 34.3 bits (77), Expect = 6.6, Method: Composition-based stats. Identities = 12/119 (10%), Positives = 35/119 (29%), Gaps = 10/119 (8%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAY 64 + + I ++ L Y + + + ++ + II+ +P + Sbjct: 91 IGIAVLIILLCLGGGYFAYSKFIANNESENLAGNTVTE-EIIEESPQEVPIKEANNITET 149 Query: 65 FLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNS 123 +V+ QE + + D + D + + + ++ N Sbjct: 150 PIVEPVAENFQEQEEVKEEPVIEDK-------NTVED--DLDLIVLETVYDEVINKGNE 199 >gi|300362497|ref|ZP_07058673.1| transcriptional regulator [Lactobacillus gasseri JV-V03] gi|300353488|gb|EFJ69360.1| transcriptional regulator [Lactobacillus gasseri JV-V03] Length = 369 Score = 34.3 bits (77), Expect = 6.7, Method: Composition-based stats. Identities = 16/126 (12%), Positives = 42/126 (33%), Gaps = 8/126 (6%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENH-VPPLAIKNTNIIKSELVSIPSVSNG- 59 ++ + + I + V+ L ++ + P A+K + E +I + Sbjct: 26 IRIIIAVILVLVLGLGAYAGSVYLKAKNAFDKTYDPKTAVKQDSFSGKEPFNILLLGTDT 85 Query: 60 ------VLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNL 113 ++ + VN ++++ L I D + ++ A+ D Sbjct: 86 GAFGRKEVRGNSDTMILVTVNPAKKKLSLMSIPRDTMARMIGTENFSVHKINAAYNIDGA 145 Query: 114 RKKIKE 119 + +K Sbjct: 146 KMAMKT 151 >gi|326934191|ref|XP_003213177.1| PREDICTED: RUN domain-containing protein 1-like [Meleagris gallopavo] Length = 470 Score = 34.3 bits (77), Expect = 7.1, Method: Composition-based stats. Identities = 11/82 (13%), Positives = 27/82 (32%), Gaps = 7/82 (8%) Query: 70 SFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQF 129 S+ + + D L L D + + LR+++ + + Sbjct: 66 SYDSLPQSVVMERQRMIIDELIKKLDMNLSEDIATLS---PEELRQRVDSAIAQIVNPAR 122 Query: 130 ISEVLIDELNYLSIVDMRSNCL 151 + E L+++L +R + Sbjct: 123 VKEQLVEQL----KTQIRDLEM 140 >gi|327441045|dbj|BAK17410.1| flagellar basal body-associated protein [Solibacillus silvestris StLB046] Length = 141 Score = 34.3 bits (77), Expect = 7.5, Method: Composition-based stats. Identities = 16/139 (11%), Positives = 43/139 (30%), Gaps = 12/139 (8%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA 63 L + I++ +I +L + + + + + I ++++G Sbjct: 10 MLIILVTITLFGVIVVVLLTQLNKEKPDGPTIDEIIESSVEI----PEITTNLADGS--- 62 Query: 64 YFLVKLSFIVNDSQERSYL---KEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKED 120 + + L +D + L + + LS + + IK Sbjct: 63 FVRITLKIQGSDKKAGEELFKRDFQVKNIVIQELSEMEEEALEGKQGK--ITFQDAIKSQ 120 Query: 121 LNSRLGSQFISEVLIDELN 139 +N + +++V I Sbjct: 121 VNELMQEGEVTQVYITSYV 139 >gi|308187296|ref|YP_003931427.1| Flagellar fliL protein [Pantoea vagans C9-1] gi|308057806|gb|ADO09978.1| Flagellar fliL protein [Pantoea vagans C9-1] Length = 161 Score = 34.3 bits (77), Expect = 7.8, Method: Composition-based stats. Identities = 15/141 (10%), Positives = 37/141 (26%), Gaps = 7/141 (4%) Query: 4 FLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL-Q 62 + + V + + + + E + ++ V+ Sbjct: 19 LIILTLAACSVAGYAVWRMMNKHEGDKPEVAKVEPPPAPV-FFALDTFTVNLVNPDNDPD 77 Query: 63 AYFLVKLSFIVNDSQ---ERSYLKEIATDYLYTLLSGPPMGDFV--QIKAFGFDNLRKKI 117 V + + D + + L LLS Q K + +++ + Sbjct: 78 RVLYVGFTLRLADEESRSRMNDYLPEVRSRLLLLLSRQSAAALATEQGKQALVEQIKQAL 137 Query: 118 KEDLNSRLGSQFISEVLIDEL 138 L Q +++VL Sbjct: 138 TPPLVKGQPPQAVNDVLFTAF 158 >gi|254295254|ref|YP_003061277.1| hypothetical protein Hbal_2910 [Hirschia baltica ATCC 49814] gi|254043785|gb|ACT60580.1| conserved hypothetical protein [Hirschia baltica ATCC 49814] Length = 151 Score = 33.9 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 17/133 (12%), Positives = 48/133 (36%), Gaps = 3/133 (2%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAY 64 L + I +++ + +++ + + + + + + + + S + A Sbjct: 10 LIATIVLALASPMAYALAPAAKASSGQIDPTAKKISGSEDYVPFFGIRVSVASGFAVSAV 69 Query: 65 FLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDL 121 V + S+ R ++ D L ++G G + + D L +++ + Sbjct: 70 MAVDAGLHIEKSKTRKHVEAIRPRIMDNLRIAVTGYANGPYREGMVPDLDILEGRMQRAV 129 Query: 122 NSRLGSQFISEVL 134 + +LG VL Sbjct: 130 DKQLGKGASQVVL 142 >gi|254557409|ref|YP_003063826.1| hypothetical protein JDM1_2242 [Lactobacillus plantarum JDM1] gi|254046336|gb|ACT63129.1| conserved hypothetical protein [Lactobacillus plantarum JDM1] Length = 717 Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 16/124 (12%), Positives = 36/124 (29%), Gaps = 3/124 (2%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K + +G+ I VV + ++ T I + S + + ++ Sbjct: 405 KLMLAGVAILVVAAGGAFFMWNHGQATQAAARTNAEKIVDQVYTSSAQRDLRASASSSTL 464 Query: 63 AYFLVKLSFIVNDSQERSYLKEIATDYLYTLL-SGPPMGDFVQIKAFGFDNLRKKIKEDL 121 + + + S++ K+ D +L D K ++ Sbjct: 465 TKLQNNIDNMKDSSEKTRLQKQ--HDTAAKMLTVRTSYQDLRNAKGLLKTDVTMDTITKG 522 Query: 122 NSRL 125 RL Sbjct: 523 QQRL 526 >gi|300768499|ref|ZP_07078398.1| conserved hypothetical protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] gi|300493806|gb|EFK28975.1| conserved hypothetical protein [Lactobacillus plantarum subsp. plantarum ATCC 14917] Length = 717 Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats. Identities = 16/124 (12%), Positives = 36/124 (29%), Gaps = 3/124 (2%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K + +G+ I VV + ++ T I + S + + ++ Sbjct: 405 KLMLAGVAILVVAAGGAFFMWNHGQATQAAARTNAEKIVDQVYTSSAQRDLRASASSSTL 464 Query: 63 AYFLVKLSFIVNDSQERSYLKEIATDYLYTLL-SGPPMGDFVQIKAFGFDNLRKKIKEDL 121 + + + S++ K+ D +L D K ++ Sbjct: 465 TKLQNNIDNMKDSSEKTRLQKQ--HDTAAKMLTVRTSYQDLRNAKGLLKTDVTMDTITKG 522 Query: 122 NSRL 125 RL Sbjct: 523 QQRL 526 >gi|308181477|ref|YP_003925605.1| hypothetical protein LPST_C2296 [Lactobacillus plantarum subsp. plantarum ST-III] gi|308046968|gb|ADN99511.1| hypothetical protein LPST_C2296 [Lactobacillus plantarum subsp. plantarum ST-III] Length = 717 Score = 33.9 bits (76), Expect = 8.4, Method: Composition-based stats. Identities = 16/124 (12%), Positives = 36/124 (29%), Gaps = 3/124 (2%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K + +G+ I VV + ++ T I + S + + ++ Sbjct: 405 KLMLAGVAILVVAAGGAFFMWNHGQATQAAARTNAEKIVDQVYTSSAQRDLRASASSSTL 464 Query: 63 AYFLVKLSFIVNDSQERSYLKEIATDYLYTLL-SGPPMGDFVQIKAFGFDNLRKKIKEDL 121 + + + S++ K+ D +L D K ++ Sbjct: 465 TKLQNNIDNMKDSSEKTRLQKQ--HDTAAKMLTVRTSYQDLRNAKGLLKTDVTMDTITKG 522 Query: 122 NSRL 125 RL Sbjct: 523 QQRL 526 >gi|28379276|ref|NP_786168.1| hypothetical protein lp_2793 [Lactobacillus plantarum WCFS1] gi|28272115|emb|CAD65019.1| unknown [Lactobacillus plantarum WCFS1] Length = 717 Score = 33.9 bits (76), Expect = 8.4, Method: Composition-based stats. Identities = 16/124 (12%), Positives = 36/124 (29%), Gaps = 3/124 (2%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 K + +G+ I VV + ++ T I + S + + ++ Sbjct: 405 KLMLAGVAILVVAAGGAFFMWNHGQATQAAARTNAEKIVDQVYTSSAQRDLRASASSSTL 464 Query: 63 AYFLVKLSFIVNDSQERSYLKEIATDYLYTLL-SGPPMGDFVQIKAFGFDNLRKKIKEDL 121 + + + S++ K+ D +L D K ++ Sbjct: 465 TKLQNNIDNMKDSSEKTRLQKQ--HDTAAKMLTVRTSYQDLRNAKGLLKTDVTMDTITKG 522 Query: 122 NSRL 125 RL Sbjct: 523 QQRL 526 >gi|317038516|ref|XP_001401605.2| hypothetical protein ANI_1_1652184 [Aspergillus niger CBS 513.88] Length = 322 Score = 33.9 bits (76), Expect = 8.4, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%), Gaps = 12/115 (10%) Query: 11 ISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLS 70 + VTL + + F + T + + S+S+G Sbjct: 164 LCAVTLAANFSAFNQRCITYARDKSEEPRYPGNGLPVMPPPRTSSLSDGK---------- 213 Query: 71 FIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL 125 ++ R + +S DFV + +N+ + + + RL Sbjct: 214 -QISRGNRRHIAFPEVVYDAFDRISECSDVDFVPADS-SLENVLSDLTDRGSRRL 266 >gi|134058515|emb|CAL00724.1| hypothetical protein An04g02370 [Aspergillus niger] Length = 454 Score = 33.9 bits (76), Expect = 8.4, Method: Composition-based stats. Identities = 16/115 (13%), Positives = 34/115 (29%), Gaps = 12/115 (10%) Query: 11 ISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQAYFLVKLS 70 + VTL + + F + T + + S+S+G Sbjct: 283 LCAVTLAANFSAFNQRCITYARDKSEEPRYPGNGLPVMPPPRTSSLSDGK---------- 332 Query: 71 FIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL 125 ++ R + +S DFV + +N+ + + + RL Sbjct: 333 -QISRGNRRHIAFPEVVYDAFDRISECSDVDFVPADS-SLENVLSDLTDRGSRRL 385 >gi|326665963|ref|XP_003198160.1| PREDICTED: RUN domain-containing protein 1-like [Danio rerio] Length = 568 Score = 33.9 bits (76), Expect = 8.4, Method: Composition-based stats. Identities = 12/93 (12%), Positives = 31/93 (33%), Gaps = 7/93 (7%) Query: 59 GVLQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIK 118 L+ + + S+ + + D L L D + + LR+++ Sbjct: 155 DDLERFAYQEGSYDSLPQSVVMERQRVIIDELIKKLDVNLNEDIGNLT---PEELRQRVD 211 Query: 119 EDLNSRLGSQFISEVLIDELNYLSIVDMRSNCL 151 + + + E L+++L +R + Sbjct: 212 AAIAQIVNPARVKEQLVEQL----KTQIRDLEM 240 >gi|260771648|ref|ZP_05880568.1| flagellar biosynthesis protein FliL [Vibrio metschnikovii CIP 69.14] gi|260613425|gb|EEX38624.1| flagellar biosynthesis protein FliL [Vibrio metschnikovii CIP 69.14] Length = 75 Score = 33.9 bits (76), Expect = 8.5, Method: Composition-based stats. Identities = 16/76 (21%), Positives = 28/76 (36%), Gaps = 6/76 (7%) Query: 69 LSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRL--- 125 + D + + D + L + +NLRK + EDLN+ L Sbjct: 1 MVANSADLPLIELHQPLIRDAVIEQLGKQTEDSIRSLAGR--ENLRKTLVEDLNNILLPE 58 Query: 126 -GSQFISEVLIDELNY 140 G I+++L + Y Sbjct: 59 TGRTLIADLLFTKYIY 74 >gi|146293746|ref|YP_001184170.1| hypothetical protein Sputcn32_2650 [Shewanella putrefaciens CN-32] gi|145565436|gb|ABP76371.1| conserved hypothetical protein [Shewanella putrefaciens CN-32] gi|319427120|gb|ADV55194.1| Protein of unknown function DUF2133 [Shewanella putrefaciens 200] Length = 206 Score = 33.9 bits (76), Expect = 8.6, Method: Composition-based stats. Identities = 16/117 (13%), Positives = 34/117 (29%), Gaps = 7/117 (5%) Query: 5 LFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVS----IPSVSNGV 60 + G V L Y S + + A + ++ + + S Sbjct: 25 ILIGAV---VGLGGLYGWNYYSDMKVAKAEEASKAFQALTTKSADEAAMLAGVAEFSKNH 81 Query: 61 LQAYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKI 117 Q + L IV + + A D L +++ P I ++ ++ Sbjct: 82 DQKGYQALLDLIVAKTAVEAKDYPKAIDALNKVITAKPGASLDTIATLRLARIQAEL 138 >gi|330817043|ref|YP_004360748.1| mixed polyketide synthase/non-ribosomal peptide synthetase [Burkholderia gladioli BSR3] gi|327369436|gb|AEA60792.1| mixed polyketide synthase/non-ribosomal peptide synthetase [Burkholderia gladioli BSR3] Length = 8441 Score = 33.9 bits (76), Expect = 8.8, Method: Composition-based stats. Identities = 20/140 (14%), Positives = 35/140 (25%), Gaps = 21/140 (15%) Query: 23 FLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQA------YFLVKLSFIVNDS 76 ++D V P + + E V P + + + Sbjct: 3517 VNGAVDKAVSETSPAPTSAPVSGLAPEPVLTPVPVPTAPSSGTPQAWQLTARAVIRESIG 3576 Query: 77 QERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLID 136 Q + D G V + E +N+RLG + VL Sbjct: 3577 QALKLGESRLDDEEAFSNYGVDSITGV------------ALVETINARLGLDLPTTVL-- 3622 Query: 137 ELNYLSIVDMRSNCLRLGSN 156 +Y+SI + Sbjct: 3623 -FDYVSIEQLSRYIATSRGE 3641 >gi|167841174|ref|ZP_02467858.1| metal ion efflux membrane fusion protein family, putative [Burkholderia thailandensis MSMB43] Length = 354 Score = 33.9 bits (76), Expect = 8.9, Method: Composition-based stats. Identities = 16/170 (9%), Positives = 44/170 (25%), Gaps = 8/170 (4%) Query: 3 KFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVLQ 62 + L +T + + ++ T + + ++ + + Sbjct: 4 RLLLFSAVTIALTAGAVWYIYQTLYPTPSASPAIAPTASQPAVQTVNGETVVVLGADAQR 63 Query: 63 AYFLVKLSFIVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRKKIKEDLN 122 A + S D L + D L + N Sbjct: 64 ASHIEAAPLAFATGPSASTAWATVVD--LQPLFDLRNR--LSAARADLDTLTAQ---AGN 116 Query: 123 SRLGSQFISEVLIDELNYLSIVDMRSNCLRLGSNASDLMTQKGSLIEKNK 172 S + S VL ++ +S ++ + ++ + L + ++ Sbjct: 117 SHAQYER-SRVLFEDDRNVSQKSLQDARAVMQADQAKLKSAAAAVGGLEA 165 >gi|160896093|ref|YP_001561675.1| flagellar basal body-associated protein FliL [Delftia acidovorans SPH-1] gi|160361677|gb|ABX33290.1| flagellar basal body-associated protein FliL [Delftia acidovorans SPH-1] Length = 191 Score = 33.9 bits (76), Expect = 9.2, Method: Composition-based stats. Identities = 14/131 (10%), Positives = 47/131 (35%), Gaps = 10/131 (7%) Query: 3 KFLFSGIWISVVTLIS----FYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSN 58 K + + I+V+ + + + S E A+ + + + + ++S+ Sbjct: 20 KLIVLIVIIAVLAIGAAAAFILLSKRHSSGDEEEGSASKAAVTVPTFLPLDNLVV-NLSD 78 Query: 59 GVLQAYFLVKLSFIVNDSQER---SYLKEIATDYLYTLLSGPPMGDFVQIKAFGFDNLRK 115 + + ++ + D + + + L+S + ++ G + L Sbjct: 79 TGGDRFVQIGITLELADEKTATTVKQYLPSIRNGILMLVSQRTAEEL--LEREGKERLAA 136 Query: 116 KIKEDLNSRLG 126 + ++++ LG Sbjct: 137 DVLNEVSAPLG 147 >gi|15022429|dbj|BAB62250.1| orf [Treponema medium] Length = 160 Score = 33.9 bits (76), Expect = 9.3, Method: Composition-based stats. Identities = 15/121 (12%), Positives = 36/121 (29%), Gaps = 5/121 (4%) Query: 25 RSMDTMVENHVPPLAIKNTNII---KSELVSIPSVSNGVLQAYFLVKLSFIVNDSQERSY 81 S E I + + N + L + +D+ + Sbjct: 40 ASERQNEEPAGGAAYIPPKEYALYGDLGQLRAVTADNPPITVILKPFLEYKASDTAFQEE 99 Query: 82 LKEIATDYLYTLLSG-PPMGDFVQIKAFGFDNLRKKIKEDLNSRLGSQFISEVLIDELNY 140 L D L + + ++ + ++++ + E +N +L I + +E Sbjct: 100 LVAK-KDALKKSILDWFSLESAYRLSSELPQDIKQTLMERINKQLVLGKIHNIYFEEFVI 158 Query: 141 L 141 L Sbjct: 159 L 159 >gi|226327726|ref|ZP_03803244.1| hypothetical protein PROPEN_01599 [Proteus penneri ATCC 35198] gi|225203430|gb|EEG85784.1| hypothetical protein PROPEN_01599 [Proteus penneri ATCC 35198] Length = 160 Score = 33.9 bits (76), Expect = 9.5, Method: Composition-based stats. Identities = 12/129 (9%), Positives = 38/129 (29%), Gaps = 10/129 (7%) Query: 20 YMLFLRSM----DTMVENHVPPLAIKNTNIIKSELVSIPSVSNGV-LQAYFLVKLSFIVN 74 + + + I + E ++ + + L + ++ ++ Sbjct: 29 FGGYSWWALKHAKSGSAGTSQQKVIPAPVFMSLEPFTVNLIDDEEHLDRVLYIGITLRLH 88 Query: 75 DSQERSYLKEIATDYLYTLLSGPPMGDFVQIKAFG-----FDNLRKKIKEDLNSRLGSQF 129 + R L + + LL ++ ++++ ++ L Q Sbjct: 89 NEDTRKRLHDYLPEVRSRLLLLLSRQQANKLATDNGKLQLMTDVKETLRPTLVPGESEQI 148 Query: 130 ISEVLIDEL 138 +S+VL Sbjct: 149 LSDVLFTTF 157 >gi|304398861|ref|ZP_07380731.1| flagellar basal body-associated protein FliL [Pantoea sp. aB] gi|304353565|gb|EFM17942.1| flagellar basal body-associated protein FliL [Pantoea sp. aB] Length = 161 Score = 33.9 bits (76), Expect = 10.0, Method: Composition-based stats. Identities = 16/145 (11%), Positives = 34/145 (23%), Gaps = 8/145 (5%) Query: 2 LKFLFSGIWISVVTLISFYML--FLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNG 59 L I + Y + + + + ++ V+ Sbjct: 14 LLIPVLLIVTLAACSAAGYAVWRMMNKHEGDKPEVAKVEPPPAPVFFALDTFTVNLVNPD 73 Query: 60 VL-QAYFLVKLSFIVNDSQERSYLKEIA-----TDYLYTLLSGPPMGDFVQIKAFGFDNL 113 V + + D R L + L Q K + + Sbjct: 74 NDPDRVLYVGFTLRLADEDTRRRLNDYLPEVRSRLLLLLSRQSAAALATEQGKQALVEQI 133 Query: 114 RKKIKEDLNSRLGSQFISEVLIDEL 138 ++ + L Q +S+VL Sbjct: 134 KQALTPPLVKGQPPQAVSDVLFTAF 158 >gi|157145262|ref|YP_001452581.1| flagellar basal body-associated protein FliL [Citrobacter koseri ATCC BAA-895] gi|157082467|gb|ABV12145.1| hypothetical protein CKO_00999 [Citrobacter koseri ATCC BAA-895] Length = 155 Score = 33.9 bits (76), Expect = 10.0, Method: Composition-based stats. Identities = 17/141 (12%), Positives = 36/141 (25%), Gaps = 8/141 (5%) Query: 2 LKFLFSGIWISVVTLISFYMLFLRSMDTMVENHVPPLAIKNTNIIKSELVSIPSVSNGVL 61 + L + T Y P + ++ ++ + Sbjct: 16 IPLLVLITLAACATAGYSYWRMQ--EHPTASATAAPPPPPAPVFFALDTFTV-NLGDADR 72 Query: 62 QAYFLVKLSF--IVNDSQERSYLKEIATDYLYTLLSGPPMGDFVQ--IKAFGFDNLRKKI 117 Y + L V ++ YL L L S K +++ + Sbjct: 73 VLYIGITLRLKDEVTRARLSEYL-PEVRSRLLLLFSRQDATALSTEAGKQTLIAAIKETL 131 Query: 118 KEDLNSRLGSQFISEVLIDEL 138 L + Q +++VL Sbjct: 132 STPLVAGQPKQEVTDVLYTAF 152 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.309 0.135 0.327 Lambda K H 0.267 0.0418 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,246,497,364 Number of Sequences: 14124377 Number of extensions: 37624857 Number of successful extensions: 220252 Number of sequences better than 10.0: 1081 Number of HSP's better than 10.0 without gapping: 287 Number of HSP's successfully gapped in prelim test: 794 Number of HSP's that attempted gapping in prelim test: 218979 Number of HSP's gapped (non-prelim): 1271 length of query: 176 length of database: 4,842,793,630 effective HSP length: 129 effective length of query: 47 effective length of database: 3,020,748,997 effective search space: 141975202859 effective search space used: 141975202859 T: 11 A: 40 X1: 16 ( 7.1 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.2 bits) S2: 76 (33.9 bits)