BLAST/PSIBLAST alignment of GI: 254780508 and GI: 116250511 at iteration 1
>gi|116250511|ref|YP_766349.1| hypothetical protein RL0739 [Rhizobium leguminosarum bv. viciae 3841] Length = 144
>gi|115255159|emb|CAK06233.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae 3841] Length = 144
 Score =  108 bits (269), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 52/107 (48%), Positives = 77/107 (71%), Gaps = 2/107 (1%)

Query: 4   SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EISW 61
           S++YRI++VL R+  +IDNEN  + N+ QFD+ +SN HK RCL+ELS+L    +  E++ 
Sbjct: 28  SNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELAA 87

Query: 62  DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
            HL+Q+  L +KL LN+  +E++L+A R VADL K  +Q+ DADGTY
Sbjct: 88  AHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTY 134