BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780508|ref|YP_003064921.1| hypothetical protein
CLIBASIA_01975 [Candidatus Liberibacter asiaticus str. psy62]
(123 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780508|ref|YP_003064921.1| hypothetical protein CLIBASIA_01975 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040185|gb|ACT56981.1| hypothetical protein CLIBASIA_01975 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 123
Score = 253 bits (645), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 123/123 (100%), Positives = 123/123 (100%)
Query: 1 MSTSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS 60
MSTSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS
Sbjct: 1 MSTSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS 60
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESLNPCK 120
WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESLNPCK
Sbjct: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESLNPCK 120
Query: 121 TTT 123
TTT
Sbjct: 121 TTT 123
>gi|315122295|ref|YP_004062784.1| hypothetical protein CKC_02735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495697|gb|ADR52296.1| hypothetical protein CKC_02735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 123
Score = 179 bits (455), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 91/121 (75%), Positives = 101/121 (83%)
Query: 1 MSTSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS 60
MST +DYRIQTVLKRVI VIDNENKNLK N QFDIS SND+KGRCLHELSV ++SC+ IS
Sbjct: 1 MSTLNDYRIQTVLKRVIEVIDNENKNLKTNKQFDISASNDNKGRCLHELSVFLISCKYIS 60
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESLNPCK 120
DH EQIR L EKLALNSSLLESYL+AARVVADLFKK+LQ+ID DGTY +G + K
Sbjct: 61 CDHSEQIRILQEKLALNSSLLESYLNAARVVADLFKKRLQDIDTDGTYSNGCSGFFDTSK 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|325291973|ref|YP_004277837.1| hypothetical protein AGROH133_04008 [Agrobacterium sp. H13-3]
gi|325059826|gb|ADY63517.1| hypothetical protein AGROH133_04008 [Agrobacterium sp. H13-3]
Length = 122
Score = 110 bits (275), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 76/107 (71%), Gaps = 2/107 (1%)
Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC--EEISW 61
S+D+RI++VL R+ +IDNEN N+ + QFD +SN HK RCL+EL++L EEI+
Sbjct: 5 SNDHRIKSVLGRLEMIIDNENDNIGKDPQFDFKVSNAHKSRCLYELTMLFRDTPHEEIAA 64
Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
HL+Q++ + KLA N+S +E++L+A R VADL K +QE D DGTY
Sbjct: 65 GHLDQVQGIKSKLATNASRVEAHLNAVRAVADLLKTAIQEADTDGTY 111
>gi|159184376|ref|NP_353611.2| hypothetical protein Atu0585 [Agrobacterium tumefaciens str. C58]
gi|159139689|gb|AAK86396.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 122
Score = 110 bits (274), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC--EEISW 61
S+D+RIQ+VL R+ +IDNEN N+ + QFD +SN HK RCL+EL++L+ E+I+
Sbjct: 5 SNDHRIQSVLGRLEMIIDNENDNIGKDPQFDFKVSNAHKSRCLYELTMLVRDTPHEDIAA 64
Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
++EQ++ + KLA N++ +E++L+A R VADL K +QE D DGTY
Sbjct: 65 GYMEQVKGIKSKLATNATRVEAHLNAVRAVADLLKNAIQEADTDGTY 111
>gi|86356341|ref|YP_468233.1| hypothetical protein RHE_CH00690 [Rhizobium etli CFN 42]
gi|86280443|gb|ABC89506.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 121
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EISW 61
S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++
Sbjct: 5 SNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELAA 64
Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY
Sbjct: 65 SHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTY 111
>gi|116250511|ref|YP_766349.1| hypothetical protein RL0739 [Rhizobium leguminosarum bv. viciae
3841]
gi|115255159|emb|CAK06233.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 144
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EISW 61
S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++
Sbjct: 28 SNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELAA 87
Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY
Sbjct: 88 AHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTY 134
>gi|327193071|gb|EGE59983.1| hypothetical protein RHECNPAF_1760072 [Rhizobium etli CNPAF512]
Length = 143
Score = 108 bits (269), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EISW 61
S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++
Sbjct: 27 SNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELAA 86
Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY
Sbjct: 87 AHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTY 133
>gi|222147600|ref|YP_002548557.1| hypothetical protein Avi_0777 [Agrobacterium vitis S4]
gi|221734588|gb|ACM35551.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 121
Score = 108 bits (269), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 77/108 (71%), Gaps = 2/108 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60
S+DYRI+TVL R+ ++DNEN + N+ QFD +SN HK RCL+EL++L + EI+
Sbjct: 4 VSNDYRIKTVLGRLEMIVDNENHRIGNDPQFDFKVSNAHKSRCLYELTMLFRDTDPKEIA 63
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
+++EQ+ L +KLALN+ +E++LDA R VAD+ + +Q+ D DGTY
Sbjct: 64 INYVEQMHGLKKKLALNARRVEAHLDAVRAVADILRSAVQDADNDGTY 111
>gi|218463242|ref|ZP_03503333.1| hypothetical protein RetlK5_29129 [Rhizobium etli Kim 5]
Length = 121
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EISW 61
S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++
Sbjct: 5 SNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELAA 64
Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY
Sbjct: 65 AHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTY 111
>gi|190890393|ref|YP_001976935.1| hypothetical protein RHECIAT_CH0000768 [Rhizobium etli CIAT 652]
gi|218509488|ref|ZP_03507366.1| hypothetical protein RetlB5_19249 [Rhizobium etli Brasil 5]
gi|218516755|ref|ZP_03513595.1| hypothetical protein Retl8_25658 [Rhizobium etli 8C-3]
gi|190695672|gb|ACE89757.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 121
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 77/107 (71%), Gaps = 2/107 (1%)
Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EISW 61
S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++
Sbjct: 5 SNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELAA 64
Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY
Sbjct: 65 AHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTY 111
>gi|241203135|ref|YP_002974231.1| hypothetical protein Rleg_0381 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857025|gb|ACS54692.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 121
Score = 107 bits (268), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/108 (48%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60
S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS L + E++
Sbjct: 4 VSNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSTLFRDTDPAELA 63
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY
Sbjct: 64 AAHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTY 111
>gi|209547957|ref|YP_002279874.1| hypothetical protein Rleg2_0349 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533713|gb|ACI53648.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 121
Score = 106 bits (264), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 77/108 (71%), Gaps = 2/108 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60
S++YRI++VL R+ +IDNEN + ++ QFD+ +SN HK RCL+ELS+L + E++
Sbjct: 4 VSNEYRIKSVLGRLEMIIDNENTRIGSDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELA 63
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY
Sbjct: 64 AAHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTY 111
>gi|222084896|ref|YP_002543425.1| hypothetical protein Arad_0925 [Agrobacterium radiobacter K84]
gi|221722344|gb|ACM25500.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 122
Score = 103 bits (257), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 49/107 (45%), Positives = 76/107 (71%), Gaps = 2/107 (1%)
Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLI--LSCEEISW 61
S+DYRI++VL R+ +IDNEN + ++ +FD+ +SN HK RCL+EL++L + E++
Sbjct: 5 SNDYRIKSVLGRLEMIIDNENNRIGSDPEFDLKVSNAHKSRCLYELTMLFRDTNPAELAV 64
Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
H+EQ+ L +KL LN+ +E++L+A R VAD+ K +Q DADGTY
Sbjct: 65 THIEQLHGLKKKLTLNARRVEAHLEAVRAVADILKNAVQNADADGTY 111
>gi|227820886|ref|YP_002824856.1| hypothetical protein NGR_c03050 [Sinorhizobium fredii NGR234]
gi|227339885|gb|ACP24103.1| hypothetical protein NGR_c03050 [Sinorhizobium fredii NGR234]
Length = 122
Score = 91.3 bits (225), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 66/108 (61%), Gaps = 2/108 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVL--ILSCEEIS 60
S D RIQ VL R+ +IDNEN + + +FDI SN HK RCL+EL++L + EIS
Sbjct: 5 ASHDLRIQNVLGRLEMIIDNENSRIGVDPKFDIKTSNAHKSRCLYELTMLHRDTAAGEIS 64
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
Q R L +KL LN+ +E++L+A R V DL K Q+ DADG Y
Sbjct: 65 PSFASQTRHLRQKLKLNAQKVEAHLEAVRSVVDLLKTAAQDADADGIY 112
>gi|15964443|ref|NP_384796.1| hypothetical protein SMc03072 [Sinorhizobium meliloti 1021]
gi|307311585|ref|ZP_07591226.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
gi|307318940|ref|ZP_07598371.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|15073620|emb|CAC45262.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|306895354|gb|EFN26109.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|306899602|gb|EFN30231.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
Length = 122
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVL--ILSCEEIS 60
S+D RIQ VL R+ +IDNEN + + +FD+ SN HK RCL+EL++L EIS
Sbjct: 5 ASNDLRIQNVLGRLEMIIDNENSRIGADPEFDLKTSNAHKSRCLYELTMLHRDAGPGEIS 64
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
Q R L KL +N+ + ++L+A R V DL K Q+ DADG Y
Sbjct: 65 PAFAAQTRHLRSKLQVNAQKVAAHLEAVRSVVDLLKTAAQDADADGIY 112
>gi|150395514|ref|YP_001325981.1| hypothetical protein Smed_0287 [Sinorhizobium medicae WSM419]
gi|150027029|gb|ABR59146.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 122
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVL--ILSCEEIS 60
S+D RIQ VL R+ +IDNEN + + +FD+ SN HK RCL+EL++L EIS
Sbjct: 5 ASNDLRIQNVLGRLEMIIDNENSRIGADPEFDLKTSNAHKSRCLYELTMLHRDAGPGEIS 64
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
Q R L KL +N+ + ++L+A R V DL K Q+ DADG Y
Sbjct: 65 PAFAAQTRHLRNKLEVNAQKVAAHLEAVRSVVDLLKTAAQDADADGIY 112
>gi|163758043|ref|ZP_02165131.1| hypothetical protein HPDFL43_00420 [Hoeflea phototrophica DFL-43]
gi|162284332|gb|EDQ34615.1| hypothetical protein HPDFL43_00420 [Hoeflea phototrophica DFL-43]
Length = 126
Score = 73.9 bits (180), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLI--LSCEEISW 61
+ D RIQ VL R+ VID ENK L +D+ SN K RCL+++++L + +++
Sbjct: 9 TQDQRIQLVLSRLETVIDAENKALGVERDYDLKRSNALKSRCLYDMTMLFKNIRPGQLAP 68
Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
H ++ ++ KL +N + +++++DA R +AD+ K+ + E +ADGTY
Sbjct: 69 GHKRRLDSVRAKLDVNQAKVKAHMDAVRDIADMIKESVAESEADGTY 115
>gi|110632629|ref|YP_672837.1| hypothetical protein Meso_0268 [Mesorhizobium sp. BNC1]
gi|110283613|gb|ABG61672.1| conserved hypothetical protein [Chelativorans sp. BNC1]
Length = 132
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEE--ISWDHLEQIR 68
+++ R+ I+ E L+ N +FDI SN K R LHELS+++ + E + DH E +
Sbjct: 25 SLITRIEESIEAETVALRANPRFDIKASNARKSRYLHELSMVVRTIREGDLGADHREALV 84
Query: 69 TLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
L KL N + L ++L A VA L + +++ ADGTY
Sbjct: 85 RLRTKLTQNEAALRAHLSAVGEVATLLQDAIRQAQADGTY 124
>gi|319781644|ref|YP_004141120.1| hypothetical protein Mesci_1917 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167532|gb|ADV11070.1| hypothetical protein Mesci_1917 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 141
Score = 60.8 bits (146), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW--DHLEQ 66
+ ++ R+ V++ E ++N + +D+ SN K R L+EL+ + E + H E
Sbjct: 30 LAAIIGRIEEVVEEETAGIRNATNYDLKASNARKSRYLYELTRAMKGGSEAEFLEQHREG 89
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111
+ L +KLA N + + ++L A VA L + +Q + DGTY G
Sbjct: 90 LTRLRQKLAKNEAAILAHLSAVNEVASLLRHAIQRAETDGTYSAG 134
>gi|13472617|ref|NP_104184.1| hypothetical protein mlr2965 [Mesorhizobium loti MAFF303099]
gi|14023363|dbj|BAB49970.1| mlr2965 [Mesorhizobium loti MAFF303099]
Length = 141
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW--DHLEQ 66
+ ++ R+ V++ E +++++ +D+ SN K R L+EL+ + E + H E
Sbjct: 30 LAAIIGRIEEVVEEETAGIRSDTSYDLKASNARKSRYLYELTRAMKGGSEAEFLEQHREG 89
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111
+ L +KLA N + + ++L A VA L + +Q + DGTY G
Sbjct: 90 LTRLRQKLAKNEAAILAHLSAVNEVAGLLRSAIQRAETDGTYSAG 134
>gi|260466577|ref|ZP_05812765.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259029583|gb|EEW30871.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 140
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW--DHLEQ 66
+ ++ R+ V++ E +++++ +D+ SN K R L+EL+ + E+ + H E
Sbjct: 30 LAAIIGRIEEVVEEETAGIRSDTSYDLKASNARKSRYLYELTRAMKGGSEVEFLEQHREG 89
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
+ L +KLA N + + ++L A VA L + +Q + DGTY
Sbjct: 90 LTRLRQKLARNEAAILAHLSAVNEVAGLLRTAIQRAETDGTY 131
>gi|300024565|ref|YP_003757176.1| hypothetical protein Hden_3060 [Hyphomicrobium denitrificans ATCC
51888]
gi|299526386|gb|ADJ24855.1| hypothetical protein Hden_3060 [Hyphomicrobium denitrificans ATCC
51888]
Length = 163
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLI--LSCEEISWDHLEQIR 68
V+ R+ +D E L + +FD SND K + L +L+ + L +++ D ++
Sbjct: 53 AVIARIEGYLDEETHALDKSLKFDFKTSNDRKSQGLLDLNQALRRLQKSDVNADLQLRLA 112
Query: 69 TLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
T EKL++N + +LDA + +A + +Q ++DGTY
Sbjct: 113 TFREKLSVNLRKIRLHLDAVKEIAAMLSDAIQNAESDGTY 152
>gi|27381959|ref|NP_773488.1| hypothetical protein bll6848 [Bradyrhizobium japonicum USDA 110]
gi|27355129|dbj|BAC52113.1| bll6848 [Bradyrhizobium japonicum USDA 110]
Length = 170
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 54/102 (52%), Gaps = 10/102 (9%)
Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLI-----LSCE-EISWDHLEQ 66
++R+ ++++ E L + D + K R + E L+ L E EI+ E+
Sbjct: 64 IRRLESIVEEETVALATGKKIDFDDFSARKSRSMLEFVRLMRARMHLGSEVEIT----EE 119
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
++ L EKL N S+LE + DA R VA + K +++ D+DGTY
Sbjct: 120 VQRLREKLERNRSILEMHYDAVREVATIIVKAIKDADSDGTY 161
>gi|115523204|ref|YP_780115.1| hypothetical protein RPE_1183 [Rhodopseudomonas palustris BisA53]
gi|115517151|gb|ABJ05135.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 159
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDH--LEQIR 68
+ ++R+ ID E + L+ + D + K R L EL+ + E D + ++
Sbjct: 53 SAIERLKTTIDEETEKLEIRAATDFDGFSRRKNRGLLELTRAVRLAENGGVDPRLVPELT 112
Query: 69 TLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
L L N + L+ +LDA R V+ + K +QE+++DGTY
Sbjct: 113 RLRASLVRNQAALQIHLDAVREVSAIIAKSIQEVESDGTY 152
>gi|328545477|ref|YP_004305586.1| hypothetical protein SL003B_3861 [polymorphum gilvum SL003B-26A1]
gi|326415217|gb|ADZ72280.1| hypothetical protein SL003B_3861 [Polymorphum gilvum SL003B-26A1]
Length = 122
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 2/102 (1%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHEL--SVLILSCEEISWDHLEQ 66
+ + R AV++ E + L+ + D+ K + L +L + L E + EQ
Sbjct: 12 LHAAIARAQAVVEAETEALRRRAGIDLKSFEYRKSQALLDLDRARRSLPSEGLDRRTSEQ 71
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
+ L +L N +LL +++ A R +AD+ K + E D+DGTY
Sbjct: 72 LGMLRMRLDENMALLSTHMSAVREIADVIAKAMLEADSDGTY 113
>gi|90422635|ref|YP_531005.1| hypothetical protein RPC_1122 [Rhodopseudomonas palustris BisB18]
gi|90104649|gb|ABD86686.1| hypothetical protein RPC_1122 [Rhodopseudomonas palustris BisB18]
Length = 162
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWD-----HLEQ 66
++R+ A ID E + L+ D+ S+ K L EL+ + + + D HL +
Sbjct: 55 AIERLNAAIDEETERLEIRVSVDLEESSRRKNHGLLELTRAMRLAQGAAVDPRVVPHLAR 114
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
+R L N + L+ +LDA R V+ + + +QE+++DGTY
Sbjct: 115 LRA---SLVRNQAALQIHLDAVRQVSAIIARSIQEVESDGTY 153
>gi|23009327|ref|ZP_00050418.1| hypothetical protein Magn03004242 [Magnetospirillum magnetotacticum
MS-1]
Length = 109
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQI--RTL 70
LKR+ A I+ E + L N D+ N K + L EL+ L S E + D I L
Sbjct: 6 LKRLEATIEAETEALAANGALDLDAVNRAKSQSLLELTRLARSVEAGALDADTGIVLARL 65
Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
+KL N + +L A + D+ + LQ ++DGTY
Sbjct: 66 RDKLIRNQEAVALHLRAVEEIGDVLQASLQAAESDGTY 103
>gi|188579936|ref|YP_001923381.1| hypothetical protein Mpop_0668 [Methylobacterium populi BJ001]
gi|179343434|gb|ACB78846.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 114
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQI--RTL 70
LKR+ A ++ E + L N+ D+ N K R L EL+ L + + D I L
Sbjct: 6 LKRLEATVEAETEALAANAPLDLGAVNRAKSRSLLELTRLARGIDAANIDAETGIVLARL 65
Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
+KL N + +L A V + + LQ ++DGTY
Sbjct: 66 RDKLIRNQEAVALHLRAVEEVGETLQASLQAAESDGTY 103
>gi|158422282|ref|YP_001523574.1| hypothetical protein AZC_0658 [Azorhizobium caulinodans ORS 571]
gi|158329171|dbj|BAF86656.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 161
Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC-EEISWDHLEQIRTLH 71
L R+ VID E L+ + D++ N K R L ELS + +++ E++ +
Sbjct: 55 LDRLEIVIDQETAALEAHQPVDLAEMNRRKSRSLLELSRALRGLPDDVDSSLGERLTGIK 114
Query: 72 EKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
KL N +L +L AAR + + L+ ++DGTY
Sbjct: 115 AKLTRNCEVLAMHLAAAREITTILNGALRAAESDGTY 151
>gi|218528738|ref|YP_002419554.1| hypothetical protein Mchl_0705 [Methylobacterium chloromethanicum
CM4]
gi|240137268|ref|YP_002961737.1| hypothetical protein MexAM1_META1p0519 [Methylobacterium extorquens
AM1]
gi|218521041|gb|ACK81626.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
gi|240007234|gb|ACS38460.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 110
Score = 40.8 bits (94), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQI--RTL 70
LKR+ A ++ E + L N+ D+ N K R L EL+ L + + D I L
Sbjct: 6 LKRLEATVEAETEALSANAALDLDAVNRAKSRSLLELTRLARGLDVATLDAETGIVLARL 65
Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
+KL N + +L A V + + LQ ++DGTY
Sbjct: 66 RDKLIRNQEAVALHLRAVEEVGETLQASLQAAESDGTY 103
>gi|163850134|ref|YP_001638177.1| hypothetical protein Mext_0694 [Methylobacterium extorquens PA1]
gi|254559279|ref|YP_003066374.1| hypothetical protein METDI0675 [Methylobacterium extorquens DM4]
gi|163661739|gb|ABY29106.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
gi|254266557|emb|CAX22321.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 114
Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 2/98 (2%)
Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQI--RTL 70
LKR+ A ++ E + L N+ D+ N K R L EL+ L + + D I L
Sbjct: 6 LKRLEATVEAETEALSANAALDLDAVNRAKSRSLLELTRLARGLDVATLDAETGIVLARL 65
Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
+KL N + +L A V + + LQ ++DGTY
Sbjct: 66 RDKLIRNQEAVALHLRAVEEVGETLQASLQAAESDGTY 103
>gi|153011497|ref|YP_001372711.1| hypothetical protein Oant_4182 [Ochrobactrum anthropi ATCC 49188]
gi|151563385|gb|ABS16882.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 156
Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC----EEISWDHLEQI 67
++R+ VID E + L D++ N K R L++ + I E + L+ +
Sbjct: 44 AIQRLEDVIDTETRLLLEGGNPDLAEINSRKSRGLYDFNKAIKKAASAAEPATMKRLQPL 103
Query: 68 -RTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
+L +KL N L+ +L A +ADL + L+ +ADGTY
Sbjct: 104 LDSLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTY 145
>gi|254720783|ref|ZP_05182594.1| hypothetical protein Bru83_15042 [Brucella sp. 83/13]
gi|265985842|ref|ZP_06098577.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306840126|ref|ZP_07472911.1| Hypothetical protein BROD_2999 [Brucella sp. NF 2653]
gi|264664434|gb|EEZ34695.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306404771|gb|EFM61065.1| Hypothetical protein BROD_2999 [Brucella sp. NF 2653]
Length = 158
Score = 37.0 bits (84), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL----SCEEISWDHL 64
+ ++R+ VI+ E + L D++ N K R L++ + I + E + L
Sbjct: 43 VMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAEPATMKGL 102
Query: 65 EQ-IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ + L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 103 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148
>gi|306845408|ref|ZP_07477982.1| Hypothetical protein BIBO1_2096 [Brucella sp. BO1]
gi|306274151|gb|EFM55967.1| Hypothetical protein BIBO1_2096 [Brucella sp. BO1]
Length = 158
Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL----SCEEISWDHL 64
+ ++R+ VI+ E + L D++ N K R L++ + I + E + L
Sbjct: 43 VMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAEPATMKGL 102
Query: 65 EQ-IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ + L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 103 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148
>gi|306841286|ref|ZP_07473997.1| Hypothetical protein BIBO2_1070 [Brucella sp. BO2]
gi|306288688|gb|EFM60019.1| Hypothetical protein BIBO2_1070 [Brucella sp. BO2]
Length = 164
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL----SCEEISWDHL 64
+ ++R+ VI+ E + L D++ N K R L++ + I + E + L
Sbjct: 49 VMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAEPATMKGL 108
Query: 65 EQ-IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ + L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 109 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 154
>gi|170744555|ref|YP_001773210.1| hypothetical protein M446_6519 [Methylobacterium sp. 4-46]
gi|168198829|gb|ACA20776.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
Length = 107
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 1/97 (1%)
Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQIRT-LH 71
L R+ A ID E + L D N K + L EL+ L +E + L T L
Sbjct: 6 LTRLEATIDEETEALLTRRPIDQDEVNRRKSQSLLELTRLARHRDEPADPDLAACLTRLR 65
Query: 72 EKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
+KLA N ++ L A V+++ L+ D+DGTY
Sbjct: 66 DKLARNQEVVALNLRAVEEVSEVIAGALRAADSDGTY 102
>gi|256826733|ref|YP_003150692.1| ParB-like nuclease [Cryptobacterium curtum DSM 15641]
gi|256582876|gb|ACU94010.1| ParB-like nuclease [Cryptobacterium curtum DSM 15641]
Length = 410
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 29 NNSQFDISISNDHKGRCLHELSVLILSCEEISWDHL--EQIRT---LHEKLALNSS---- 79
+N Q D+ I H GR L + I +C I DHL EQ R +H +L LNSS
Sbjct: 52 HNPQGDMEIVEGH-GRVLALQRLGIDTCPVIYLDHLSDEQRRAYTHVHNQLTLNSSFDMS 110
Query: 80 LLESYLDAARVVADLF-----------KKQLQEIDADGTYHDGFCESLNPCKTT 122
+LES LD+ F +K+ + D HD F E KTT
Sbjct: 111 VLESDLDSLDFDWGSFGFDDGESWFENRKKWDDQKGDSAEHDAFVEKFENKKTT 164
>gi|239834416|ref|ZP_04682744.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239822479|gb|EEQ94048.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 160
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC----EEISWDHLEQI 67
++R+ VID E + L D++ N K R L++ + I E + L+ +
Sbjct: 48 AIQRLEDVIDTETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAAGAAEPATMKPLQPL 107
Query: 68 -RTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
+L KL N L+ +L A +ADL + L+ +ADGTY
Sbjct: 108 LDSLKHKLEKNCEALQLHLRAVGELADLIRGALETQEADGTY 149
>gi|163845447|ref|YP_001623102.1| hypothetical protein BSUIS_B1355 [Brucella suis ATCC 23445]
gi|163676170|gb|ABY40280.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 158
Score = 35.4 bits (80), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66
+ ++R+ VI+ E++ L D++ N K R L++ + I + + +
Sbjct: 43 VMRAIERLEDVIETESRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAAPATMKGL 102
Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 103 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148
>gi|148558381|ref|YP_001257993.1| hypothetical protein BOV_A1033 [Brucella ovis ATCC 25840]
gi|225628418|ref|ZP_03786452.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|148369666|gb|ABQ62538.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|225616264|gb|EEH13312.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 175
Score = 35.4 bits (80), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66
+ ++R+ VI+ E + L D++ N K R L++ + I + + +
Sbjct: 60 VMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAAPATMKGL 119
Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 120 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 165
>gi|23500843|ref|NP_700283.1| hypothetical protein BRA1128 [Brucella suis 1330]
gi|161621171|ref|YP_001595057.1| hypothetical protein BCAN_B1157 [Brucella canis ATCC 23365]
gi|254699253|ref|ZP_05161081.1| hypothetical protein Bsuib55_00087 [Brucella suis bv. 5 str. 513]
gi|254702372|ref|ZP_05164200.1| hypothetical protein Bsuib36_00070 [Brucella suis bv. 3 str. 686]
gi|254706507|ref|ZP_05168335.1| hypothetical protein BpinM_05857 [Brucella pinnipedialis
M163/99/10]
gi|254711208|ref|ZP_05173019.1| hypothetical protein BpinB_13295 [Brucella pinnipedialis B2/94]
gi|256015887|ref|YP_003105896.1| hypothetical protein BMI_II1134 [Brucella microti CCM 4915]
gi|256030163|ref|ZP_05443777.1| hypothetical protein BpinM2_05865 [Brucella pinnipedialis
M292/94/1]
gi|256059815|ref|ZP_05450010.1| hypothetical protein Bneo5_05660 [Brucella neotomae 5K33]
gi|256158342|ref|ZP_05456246.1| hypothetical protein BcetM4_05797 [Brucella ceti M490/95/1]
gi|256252724|ref|ZP_05458260.1| hypothetical protein BcetB_00085 [Brucella ceti B1/94]
gi|260166785|ref|ZP_05753596.1| hypothetical protein BruF5_00070 [Brucella sp. F5/99]
gi|260568725|ref|ZP_05839194.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261219802|ref|ZP_05934083.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261313962|ref|ZP_05953159.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261318799|ref|ZP_05957996.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261323795|ref|ZP_05962992.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261749691|ref|ZP_05993400.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261752935|ref|ZP_05996644.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261756162|ref|ZP_05999871.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265987194|ref|ZP_06099751.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265996857|ref|ZP_06109414.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|23464506|gb|AAN34288.1| conserved hypothetical protein [Brucella suis 1330]
gi|161337982|gb|ABX64286.1| Hypothetical protein BCAN_B1157 [Brucella canis ATCC 23365]
gi|255998547|gb|ACU50234.1| hypothetical protein BMI_II1134 [Brucella microti CCM 4915]
gi|260155390|gb|EEW90471.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260918386|gb|EEX85039.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261298022|gb|EEY01519.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261299775|gb|EEY03272.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261302988|gb|EEY06485.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261736146|gb|EEY24142.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261739444|gb|EEY27370.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261742688|gb|EEY30614.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262551154|gb|EEZ07315.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264659391|gb|EEZ29652.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 158
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66
+ ++R+ VI+ E + L D++ N K R L++ + I + + +
Sbjct: 43 VMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAAPATMKGL 102
Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 103 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148
>gi|225686875|ref|YP_002734847.1| hypothetical protein BMEA_B1122 [Brucella melitensis ATCC 23457]
gi|256112187|ref|ZP_05453108.1| hypothetical protein Bmelb3E_05797 [Brucella melitensis bv. 3 str.
Ether]
gi|256261990|ref|ZP_05464522.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|265993614|ref|ZP_06106171.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|225642980|gb|ACO02893.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|262764484|gb|EEZ10516.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263091474|gb|EEZ16010.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
Length = 158
Score = 35.0 bits (79), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66
+ ++R+ VI+ E + L D++ N K R L++ + I + + +
Sbjct: 43 VMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 102
Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 103 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148
>gi|256042854|ref|ZP_05445800.1| hypothetical protein Bmelb1R_00120 [Brucella melitensis bv. 1 str.
Rev.1]
gi|260564092|ref|ZP_05834577.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265989290|ref|ZP_06101847.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|260151735|gb|EEW86828.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|262999959|gb|EEZ12649.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 158
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66
+ ++R+ VI+ E + L D++ N K R L++ + I + + +
Sbjct: 43 VMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 102
Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 103 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148
>gi|326411291|gb|ADZ68355.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326554580|gb|ADZ89219.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 164
Score = 35.0 bits (79), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66
+ ++R+ VI+ E + L D++ N K R L++ + I + + +
Sbjct: 49 VMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 108
Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 109 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 154
>gi|118589955|ref|ZP_01547359.1| hypothetical protein SIAM614_14860 [Stappia aggregata IAM 12614]
gi|118437452|gb|EAV44089.1| hypothetical protein SIAM614_14860 [Stappia aggregata IAM 12614]
Length = 142
Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 47/104 (45%), Gaps = 2/104 (1%)
Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDH--LEQIRTL 70
++R I + +E + L+ N D+ I K + L +L+ + H E +
Sbjct: 36 VRRAIGAVLDETRALRANPTADLKIFEYGKSQALLDLARARSLVPPAFYSHELREDLADF 95
Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCE 114
+ L N LL+ +++A V + + + + ++DGTY F E
Sbjct: 96 KDVLDENIGLLQLHMNAVSEVVGMMSRTMIDYESDGTYEAPFPE 139
>gi|237817492|ref|ZP_04596483.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|237787327|gb|EEP61544.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 175
Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66
+ ++R+ VI+ E + L D++ N K R L++ + I + + +
Sbjct: 60 LMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 119
Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 120 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 165
>gi|297250161|ref|ZP_06933862.1| hypothetical protein BAYG_02949 [Brucella abortus bv. 5 str. B3196]
gi|297174030|gb|EFH33394.1| hypothetical protein BAYG_02949 [Brucella abortus bv. 5 str. B3196]
Length = 164
Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66
+ ++R+ VI+ E + L D++ N K R L++ + I + + +
Sbjct: 49 LMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 108
Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 109 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 154
>gi|62317947|ref|YP_223800.1| hypothetical protein BruAb2_1065 [Brucella abortus bv. 1 str.
9-941]
gi|83269924|ref|YP_419215.1| hypothetical protein BAB2_1085 [Brucella melitensis biovar Abortus
2308]
gi|189023198|ref|YP_001932939.1| hypothetical protein BAbS19_II10100 [Brucella abortus S19]
gi|254691623|ref|ZP_05154877.1| hypothetical protein Babob68_16092 [Brucella abortus bv. 6 str.
870]
gi|254695081|ref|ZP_05156909.1| hypothetical protein Babob3T_10593 [Brucella abortus bv. 3 str.
Tulya]
gi|254698178|ref|ZP_05160006.1| hypothetical protein Babob28_10825 [Brucella abortus bv. 2 str.
86/8/59]
gi|254731623|ref|ZP_05190201.1| hypothetical protein Babob42_10635 [Brucella abortus bv. 4 str.
292]
gi|256256810|ref|ZP_05462346.1| hypothetical protein Babob9C_05520 [Brucella abortus bv. 9 str.
C68]
gi|260544131|ref|ZP_05819952.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260757253|ref|ZP_05869601.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260759382|ref|ZP_05871730.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260762625|ref|ZP_05874957.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883057|ref|ZP_05894671.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261215433|ref|ZP_05929714.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|62198140|gb|AAX76439.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82940198|emb|CAJ13251.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|189021772|gb|ACD74493.1| hypothetical protein BAbS19_II10100 [Brucella abortus S19]
gi|260097402|gb|EEW81276.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260669700|gb|EEX56640.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260673046|gb|EEX59867.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260677361|gb|EEX64182.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260872585|gb|EEX79654.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260917040|gb|EEX83901.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
Length = 158
Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ-- 66
+ ++R+ VI+ E + L D++ N K R L++ + I + + +
Sbjct: 43 LMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 102
Query: 67 ---IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 103 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148
>gi|17988515|ref|NP_541148.1| putative cytoplasmic protein [Brucella melitensis bv. 1 str. 16M]
gi|17984308|gb|AAL53412.1| hypothetical cytosolic protein [Brucella melitensis bv. 1 str. 16M]
Length = 115
Score = 34.3 bits (77), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ----- 66
++R+ VI+ E + L D++ N K R L++ + I + + +
Sbjct: 3 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGLQPF 62
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 63 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 105
>gi|256422979|ref|YP_003123632.1| glycosyl transferase group 1 [Chitinophaga pinensis DSM 2588]
gi|256037887|gb|ACU61431.1| glycosyl transferase group 1 [Chitinophaga pinensis DSM 2588]
Length = 390
Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 34/55 (61%), Gaps = 5/55 (9%)
Query: 59 ISWDHLEQIRTLHEKLALNSSLLESYLDAARVVA-----DLFKKQLQEIDADGTY 108
IS ++++++R E+L N L AA++VA + FK+Q++++ ADGTY
Sbjct: 308 ISGNYIDKVRKHVEQLLSNKPLYADMSCAAQLVAFQFKPEFFKQQVEDLFADGTY 362
>gi|298208201|ref|YP_003716380.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
[Croceibacter atlanticus HTCC2559]
gi|83848122|gb|EAP85992.1| UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
[Croceibacter atlanticus HTCC2559]
Length = 467
Score = 33.5 bits (75), Expect = 9.5, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLI 53
S DY+I T++ ++ +N ++KN S+F IS+ LHEL +L+
Sbjct: 156 SDDYQITTMVDFGTKILGTQNASIKNLSEFKDEISDARTFSFLHELEMLL 205
Searching..................................................done
Results from round 2
>gi|254780508|ref|YP_003064921.1| hypothetical protein CLIBASIA_01975 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040185|gb|ACT56981.1| hypothetical protein CLIBASIA_01975 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 123
Score = 174 bits (441), Expect = 3e-42, Method: Composition-based stats.
Identities = 123/123 (100%), Positives = 123/123 (100%)
Query: 1 MSTSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS 60
MSTSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS
Sbjct: 1 MSTSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS 60
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESLNPCK 120
WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESLNPCK
Sbjct: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESLNPCK 120
Query: 121 TTT 123
TTT
Sbjct: 121 TTT 123
>gi|315122295|ref|YP_004062784.1| hypothetical protein CKC_02735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495697|gb|ADR52296.1| hypothetical protein CKC_02735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 123
Score = 161 bits (408), Expect = 2e-38, Method: Composition-based stats.
Identities = 91/121 (75%), Positives = 101/121 (83%)
Query: 1 MSTSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS 60
MST +DYRIQTVLKRVI VIDNENKNLK N QFDIS SND+KGRCLHELSV ++SC+ IS
Sbjct: 1 MSTLNDYRIQTVLKRVIEVIDNENKNLKTNKQFDISASNDNKGRCLHELSVFLISCKYIS 60
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESLNPCK 120
DH EQIR L EKLALNSSLLESYL+AARVVADLFKK+LQ+ID DGTY +G + K
Sbjct: 61 CDHSEQIRILQEKLALNSSLLESYLNAARVVADLFKKRLQDIDTDGTYSNGCSGFFDTSK 120
Query: 121 T 121
T
Sbjct: 121 T 121
>gi|325291973|ref|YP_004277837.1| hypothetical protein AGROH133_04008 [Agrobacterium sp. H13-3]
gi|325059826|gb|ADY63517.1| hypothetical protein AGROH133_04008 [Agrobacterium sp. H13-3]
Length = 122
Score = 155 bits (393), Expect = 1e-36, Method: Composition-based stats.
Identities = 53/108 (49%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC--EEISW 61
S+D+RI++VL R+ +IDNEN N+ + QFD +SN HK RCL+EL++L EEI+
Sbjct: 5 SNDHRIKSVLGRLEMIIDNENDNIGKDPQFDFKVSNAHKSRCLYELTMLFRDTPHEEIAA 64
Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
HL+Q++ + KLA N+S +E++L+A R VADL K +QE D DGTY
Sbjct: 65 GHLDQVQGIKSKLATNASRVEAHLNAVRAVADLLKTAIQEADTDGTYS 112
>gi|222147600|ref|YP_002548557.1| hypothetical protein Avi_0777 [Agrobacterium vitis S4]
gi|221734588|gb|ACM35551.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 121
Score = 155 bits (393), Expect = 2e-36, Method: Composition-based stats.
Identities = 51/109 (46%), Positives = 77/109 (70%), Gaps = 2/109 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL--SCEEIS 60
S+DYRI+TVL R+ ++DNEN + N+ QFD +SN HK RCL+EL++L +EI+
Sbjct: 4 VSNDYRIKTVLGRLEMIVDNENHRIGNDPQFDFKVSNAHKSRCLYELTMLFRDTDPKEIA 63
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+++EQ+ L +KLALN+ +E++LDA R VAD+ + +Q+ D DGTY
Sbjct: 64 INYVEQMHGLKKKLALNARRVEAHLDAVRAVADILRSAVQDADNDGTYS 112
>gi|159184376|ref|NP_353611.2| hypothetical protein Atu0585 [Agrobacterium tumefaciens str. C58]
gi|159139689|gb|AAK86396.2| conserved hypothetical protein [Agrobacterium tumefaciens str. C58]
Length = 122
Score = 154 bits (389), Expect = 5e-36, Method: Composition-based stats.
Identities = 51/108 (47%), Positives = 77/108 (71%), Gaps = 2/108 (1%)
Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC--EEISW 61
S+D+RIQ+VL R+ +IDNEN N+ + QFD +SN HK RCL+EL++L+ E+I+
Sbjct: 5 SNDHRIQSVLGRLEMIIDNENDNIGKDPQFDFKVSNAHKSRCLYELTMLVRDTPHEDIAA 64
Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
++EQ++ + KLA N++ +E++L+A R VADL K +QE D DGTY
Sbjct: 65 GYMEQVKGIKSKLATNATRVEAHLNAVRAVADLLKNAIQEADTDGTYS 112
>gi|222084896|ref|YP_002543425.1| hypothetical protein Arad_0925 [Agrobacterium radiobacter K84]
gi|221722344|gb|ACM25500.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 122
Score = 152 bits (384), Expect = 2e-35, Method: Composition-based stats.
Identities = 49/109 (44%), Positives = 75/109 (68%), Gaps = 2/109 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILS--CEEIS 60
S+DYRI++VL R+ +IDNEN + ++ +FD+ +SN HK RCL+EL++L E++
Sbjct: 4 ISNDYRIKSVLGRLEMIIDNENNRIGSDPEFDLKVSNAHKSRCLYELTMLFRDTNPAELA 63
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
H+EQ+ L +KL LN+ +E++L+A R VAD+ K +Q DADGTY
Sbjct: 64 VTHIEQLHGLKKKLTLNARRVEAHLEAVRAVADILKNAVQNADADGTYS 112
>gi|190890393|ref|YP_001976935.1| hypothetical protein RHECIAT_CH0000768 [Rhizobium etli CIAT 652]
gi|218509488|ref|ZP_03507366.1| hypothetical protein RetlB5_19249 [Rhizobium etli Brasil 5]
gi|218516755|ref|ZP_03513595.1| hypothetical protein Retl8_25658 [Rhizobium etli 8C-3]
gi|190695672|gb|ACE89757.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 121
Score = 151 bits (381), Expect = 4e-35, Method: Composition-based stats.
Identities = 52/109 (47%), Positives = 76/109 (69%), Gaps = 2/109 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL--SCEEIS 60
S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L E++
Sbjct: 4 ISNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELA 63
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY
Sbjct: 64 AAHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTYS 112
>gi|86356341|ref|YP_468233.1| hypothetical protein RHE_CH00690 [Rhizobium etli CFN 42]
gi|86280443|gb|ABC89506.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 121
Score = 150 bits (379), Expect = 6e-35, Method: Composition-based stats.
Identities = 52/109 (47%), Positives = 77/109 (70%), Gaps = 2/109 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60
S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++
Sbjct: 4 ISNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELA 63
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY
Sbjct: 64 ASHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTYS 112
>gi|218463242|ref|ZP_03503333.1| hypothetical protein RetlK5_29129 [Rhizobium etli Kim 5]
Length = 121
Score = 150 bits (378), Expect = 7e-35, Method: Composition-based stats.
Identities = 52/109 (47%), Positives = 77/109 (70%), Gaps = 2/109 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60
S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++
Sbjct: 4 ISNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELA 63
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY
Sbjct: 64 AAHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTYS 112
>gi|209547957|ref|YP_002279874.1| hypothetical protein Rleg2_0349 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533713|gb|ACI53648.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 121
Score = 150 bits (378), Expect = 8e-35, Method: Composition-based stats.
Identities = 51/109 (46%), Positives = 77/109 (70%), Gaps = 2/109 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60
S++YRI++VL R+ +IDNEN + ++ QFD+ +SN HK RCL+ELS+L + E++
Sbjct: 4 VSNEYRIKSVLGRLEMIIDNENTRIGSDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELA 63
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY
Sbjct: 64 AAHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTYS 112
>gi|327193071|gb|EGE59983.1| hypothetical protein RHECNPAF_1760072 [Rhizobium etli CNPAF512]
Length = 143
Score = 149 bits (377), Expect = 1e-34, Method: Composition-based stats.
Identities = 52/109 (47%), Positives = 77/109 (70%), Gaps = 2/109 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60
S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++
Sbjct: 26 ISNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELA 85
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY
Sbjct: 86 AAHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTYS 134
>gi|116250511|ref|YP_766349.1| hypothetical protein RL0739 [Rhizobium leguminosarum bv. viciae
3841]
gi|115255159|emb|CAK06233.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 144
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 52/109 (47%), Positives = 77/109 (70%), Gaps = 2/109 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60
S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS+L + E++
Sbjct: 27 ISNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSMLFRDTDPAELA 86
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY
Sbjct: 87 AAHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTYS 135
>gi|241203135|ref|YP_002974231.1| hypothetical protein Rleg_0381 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857025|gb|ACS54692.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 121
Score = 147 bits (372), Expect = 4e-34, Method: Composition-based stats.
Identities = 52/109 (47%), Positives = 76/109 (69%), Gaps = 2/109 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EIS 60
S++YRI++VL R+ +IDNEN + N+ QFD+ +SN HK RCL+ELS L + E++
Sbjct: 4 VSNEYRIKSVLGRLEMIIDNENTRIGNDPQFDLKVSNAHKSRCLYELSTLFRDTDPAELA 63
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
HL+Q+ L +KL LN+ +E++L+A R VADL K +Q+ DADGTY
Sbjct: 64 AAHLDQLHGLKKKLVLNARRVEAHLEAVRAVADLLKNAVQDADADGTYS 112
>gi|15964443|ref|NP_384796.1| hypothetical protein SMc03072 [Sinorhizobium meliloti 1021]
gi|307311585|ref|ZP_07591226.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
gi|307318940|ref|ZP_07598371.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|15073620|emb|CAC45262.1| Conserved hypothetical protein [Sinorhizobium meliloti 1021]
gi|306895354|gb|EFN26109.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|306899602|gb|EFN30231.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
Length = 122
Score = 141 bits (356), Expect = 3e-32, Method: Composition-based stats.
Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL--SCEEIS 60
S+D RIQ VL R+ +IDNEN + + +FD+ SN HK RCL+EL++L EIS
Sbjct: 5 ASNDLRIQNVLGRLEMIIDNENSRIGADPEFDLKTSNAHKSRCLYELTMLHRDAGPGEIS 64
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111
Q R L KL +N+ + ++L+A R V DL K Q+ DADG Y +
Sbjct: 65 PAFAAQTRHLRSKLQVNAQKVAAHLEAVRSVVDLLKTAAQDADADGIYTEA 115
>gi|227820886|ref|YP_002824856.1| hypothetical protein NGR_c03050 [Sinorhizobium fredii NGR234]
gi|227339885|gb|ACP24103.1| hypothetical protein NGR_c03050 [Sinorhizobium fredii NGR234]
Length = 122
Score = 140 bits (354), Expect = 4e-32, Method: Composition-based stats.
Identities = 50/111 (45%), Positives = 66/111 (59%), Gaps = 2/111 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC--EEIS 60
S D RIQ VL R+ +IDNEN + + +FDI SN HK RCL+EL++L EIS
Sbjct: 5 ASHDLRIQNVLGRLEMIIDNENSRIGVDPKFDIKTSNAHKSRCLYELTMLHRDTAAGEIS 64
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111
Q R L +KL LN+ +E++L+A R V DL K Q+ DADG Y +
Sbjct: 65 PSFASQTRHLRQKLKLNAQKVEAHLEAVRSVVDLLKTAAQDADADGIYTEA 115
>gi|150395514|ref|YP_001325981.1| hypothetical protein Smed_0287 [Sinorhizobium medicae WSM419]
gi|150027029|gb|ABR59146.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 122
Score = 140 bits (353), Expect = 6e-32, Method: Composition-based stats.
Identities = 47/111 (42%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Query: 3 TSSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL--SCEEIS 60
S+D RIQ VL R+ +IDNEN + + +FD+ SN HK RCL+EL++L EIS
Sbjct: 5 ASNDLRIQNVLGRLEMIIDNENSRIGADPEFDLKTSNAHKSRCLYELTMLHRDAGPGEIS 64
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111
Q R L KL +N+ + ++L+A R V DL K Q+ DADG Y +
Sbjct: 65 PAFAAQTRHLRNKLEVNAQKVAAHLEAVRSVVDLLKTAAQDADADGIYTEA 115
>gi|319781644|ref|YP_004141120.1| hypothetical protein Mesci_1917 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
gi|317167532|gb|ADV11070.1| hypothetical protein Mesci_1917 [Mesorhizobium ciceri biovar
biserrulae WSM1271]
Length = 141
Score = 130 bits (327), Expect = 6e-29, Method: Composition-based stats.
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 2/105 (1%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW--DHLEQ 66
+ ++ R+ V++ E ++N + +D+ SN K R L+EL+ + E + H E
Sbjct: 30 LAAIIGRIEEVVEEETAGIRNATNYDLKASNARKSRYLYELTRAMKGGSEAEFLEQHREG 89
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111
+ L +KLA N + + ++L A VA L + +Q + DGTY G
Sbjct: 90 LTRLRQKLAKNEAAILAHLSAVNEVASLLRHAIQRAETDGTYSAG 134
>gi|163758043|ref|ZP_02165131.1| hypothetical protein HPDFL43_00420 [Hoeflea phototrophica DFL-43]
gi|162284332|gb|EDQ34615.1| hypothetical protein HPDFL43_00420 [Hoeflea phototrophica DFL-43]
Length = 126
Score = 129 bits (324), Expect = 1e-28, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
Query: 4 SSDYRIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILS--CEEISW 61
+ D RIQ VL R+ VID ENK L +D+ SN K RCL+++++L + +++
Sbjct: 9 TQDQRIQLVLSRLETVIDAENKALGVERDYDLKRSNALKSRCLYDMTMLFKNIRPGQLAP 68
Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHD 110
H ++ ++ KL +N + +++++DA R +AD+ K+ + E +ADGTY
Sbjct: 69 GHKRRLDSVRAKLDVNQAKVKAHMDAVRDIADMIKESVAESEADGTYSA 117
>gi|260466577|ref|ZP_05812765.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
gi|259029583|gb|EEW30871.1| conserved hypothetical protein [Mesorhizobium opportunistum
WSM2075]
Length = 140
Score = 128 bits (321), Expect = 3e-28, Method: Composition-based stats.
Identities = 29/104 (27%), Positives = 56/104 (53%), Gaps = 2/104 (1%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW--DHLEQ 66
+ ++ R+ V++ E +++++ +D+ SN K R L+EL+ + E+ + H E
Sbjct: 30 LAAIIGRIEEVVEEETAGIRSDTSYDLKASNARKSRYLYELTRAMKGGSEVEFLEQHREG 89
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHD 110
+ L +KLA N + + ++L A VA L + +Q + DGTY
Sbjct: 90 LTRLRQKLARNEAAILAHLSAVNEVAGLLRTAIQRAETDGTYSA 133
>gi|13472617|ref|NP_104184.1| hypothetical protein mlr2965 [Mesorhizobium loti MAFF303099]
gi|14023363|dbj|BAB49970.1| mlr2965 [Mesorhizobium loti MAFF303099]
Length = 141
Score = 127 bits (319), Expect = 5e-28, Method: Composition-based stats.
Identities = 30/105 (28%), Positives = 56/105 (53%), Gaps = 2/105 (1%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW--DHLEQ 66
+ ++ R+ V++ E +++++ +D+ SN K R L+EL+ + E + H E
Sbjct: 30 LAAIIGRIEEVVEEETAGIRSDTSYDLKASNARKSRYLYELTRAMKGGSEAEFLEQHREG 89
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111
+ L +KLA N + + ++L A VA L + +Q + DGTY G
Sbjct: 90 LTRLRQKLAKNEAAILAHLSAVNEVAGLLRSAIQRAETDGTYSAG 134
>gi|110632629|ref|YP_672837.1| hypothetical protein Meso_0268 [Mesorhizobium sp. BNC1]
gi|110283613|gb|ABG61672.1| conserved hypothetical protein [Chelativorans sp. BNC1]
Length = 132
Score = 118 bits (295), Expect = 4e-25, Method: Composition-based stats.
Identities = 39/111 (35%), Positives = 60/111 (54%), Gaps = 5/111 (4%)
Query: 4 SSDYR---IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEE-- 58
S D R + +++ R+ I+ E L+ N +FDI SN K R LHELS+++ + E
Sbjct: 15 SPDQRSAGLLSLITRIEESIEAETVALRANPRFDIKASNARKSRYLHELSMVVRTIREGD 74
Query: 59 ISWDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ DH E + L KL N + L ++L A VA L + +++ ADGTY
Sbjct: 75 LGADHREALVRLRTKLTQNEAALRAHLSAVGEVATLLQDAIRQAQADGTYS 125
>gi|328545477|ref|YP_004305586.1| hypothetical protein SL003B_3861 [polymorphum gilvum SL003B-26A1]
gi|326415217|gb|ADZ72280.1| hypothetical protein SL003B_3861 [Polymorphum gilvum SL003B-26A1]
Length = 122
Score = 110 bits (274), Expect = 1e-22, Method: Composition-based stats.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 2/110 (1%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHEL--SVLILSCEEISWDHLEQ 66
+ + R AV++ E + L+ + D+ K + L +L + L E + EQ
Sbjct: 12 LHAAIARAQAVVEAETEALRRRAGIDLKSFEYRKSQALLDLDRARRSLPSEGLDRRTSEQ 71
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESL 116
+ L +L N +LL +++ A R +AD+ K + E D+DGTY L
Sbjct: 72 LGMLRMRLDENMALLSTHMSAVREIADVIAKAMLEADSDGTYSRPGSGCL 121
>gi|300024565|ref|YP_003757176.1| hypothetical protein Hden_3060 [Hyphomicrobium denitrificans ATCC
51888]
gi|299526386|gb|ADJ24855.1| hypothetical protein Hden_3060 [Hyphomicrobium denitrificans ATCC
51888]
Length = 163
Score = 109 bits (273), Expect = 1e-22, Method: Composition-based stats.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL--SCEEISWDHLEQIR 68
V+ R+ +D E L + +FD SND K + L +L+ + +++ D ++
Sbjct: 53 AVIARIEGYLDEETHALDKSLKFDFKTSNDRKSQGLLDLNQALRRLQKSDVNADLQLRLA 112
Query: 69 TLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
T EKL++N + +LDA + +A + +Q ++DGTY
Sbjct: 113 TFREKLSVNLRKIRLHLDAVKEIAAMLSDAIQNAESDGTYT 153
>gi|115523204|ref|YP_780115.1| hypothetical protein RPE_1183 [Rhodopseudomonas palustris BisA53]
gi|115517151|gb|ABJ05135.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53]
Length = 159
Score = 107 bits (268), Expect = 4e-22, Method: Composition-based stats.
Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 2/101 (1%)
Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHL--EQIR 68
+ ++R+ ID E + L+ + D + K R L EL+ + E D ++
Sbjct: 53 SAIERLKTTIDEETEKLEIRAATDFDGFSRRKNRGLLELTRAVRLAENGGVDPRLVPELT 112
Query: 69 TLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
L L N + L+ +LDA R V+ + K +QE+++DGTY
Sbjct: 113 RLRASLVRNQAALQIHLDAVREVSAIIAKSIQEVESDGTYS 153
>gi|27381959|ref|NP_773488.1| hypothetical protein bll6848 [Bradyrhizobium japonicum USDA 110]
gi|27355129|dbj|BAC52113.1| bll6848 [Bradyrhizobium japonicum USDA 110]
Length = 170
Score = 105 bits (261), Expect = 3e-21, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 53/103 (51%), Gaps = 2/103 (1%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS--WDHLEQ 66
+ ++R+ ++++ E L + D + K R + E L+ + + + E+
Sbjct: 60 LLAAIRRLESIVEEETVALATGKKIDFDDFSARKSRSMLEFVRLMRARMHLGSEVEITEE 119
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
++ L EKL N S+LE + DA R VA + K +++ D+DGTY
Sbjct: 120 VQRLREKLERNRSILEMHYDAVREVATIIVKAIKDADSDGTYT 162
>gi|90422635|ref|YP_531005.1| hypothetical protein RPC_1122 [Rhodopseudomonas palustris BisB18]
gi|90104649|gb|ABD86686.1| hypothetical protein RPC_1122 [Rhodopseudomonas palustris BisB18]
Length = 162
Score = 98.2 bits (243), Expect = 3e-19, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 2/103 (1%)
Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHL--EQIR 68
++R+ A ID E + L+ D+ S+ K L EL+ + + + D +
Sbjct: 54 NAIERLNAAIDEETERLEIRVSVDLEESSRRKNHGLLELTRAMRLAQGAAVDPRVVPHLA 113
Query: 69 TLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111
L L N + L+ +LDA R V+ + + +QE+++DGTY
Sbjct: 114 RLRASLVRNQAALQIHLDAVRQVSAIIARSIQEVESDGTYSAA 156
>gi|158422282|ref|YP_001523574.1| hypothetical protein AZC_0658 [Azorhizobium caulinodans ORS 571]
gi|158329171|dbj|BAF86656.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 161
Score = 88.9 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 1/107 (0%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILS-CEEISWDHLEQI 67
+ + L R+ VID E L+ + D++ N K R L ELS + +++ E++
Sbjct: 51 LVSSLDRLEIVIDQETAALEAHQPVDLAEMNRRKSRSLLELSRALRGLPDDVDSSLGERL 110
Query: 68 RTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCE 114
+ KL N +L +L AAR + + L+ ++DGTY
Sbjct: 111 TGIKAKLTRNCEVLAMHLAAAREITTILNGALRAAESDGTYSTALLG 157
>gi|254503173|ref|ZP_05115324.1| hypothetical protein SADFL11_3212 [Labrenzia alexandrii DFL-11]
gi|222439244|gb|EEE45923.1| hypothetical protein SADFL11_3212 [Labrenzia alexandrii DFL-11]
Length = 124
Score = 85.5 bits (210), Expect = 3e-15, Method: Composition-based stats.
Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVL--ILSCEEISWDHLEQIRT 69
+ R I V++ E + L+ N D+ K + L +L+ ++ + D +++
Sbjct: 17 AIDRAIEVVEAETRALRANPTTDLKPFEYRKSQALLDLTRARSLVPPSAYTEDVKDRLVD 76
Query: 70 LHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCE 114
+ L N LL +++A V + + + + ++DGTY F E
Sbjct: 77 FKDVLQENVDLLTLHMNAVSEVVKMMSRTMLDQESDGTYAAPFPE 121
>gi|23009327|ref|ZP_00050418.1| hypothetical protein Magn03004242 [Magnetospirillum magnetotacticum
MS-1]
Length = 109
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILS--CEEISWDHLEQ 66
+ LKR+ A I+ E + L N D+ N K + L EL+ L S + D
Sbjct: 2 LLASLKRLEATIEAETEALAANGALDLDAVNRAKSQSLLELTRLARSVEAGALDADTGIV 61
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N + +L A + D+ + LQ ++DGTY
Sbjct: 62 LARLRDKLIRNQEAVALHLRAVEEIGDVLQASLQAAESDGTYS 104
>gi|220926494|ref|YP_002501796.1| hypothetical protein Mnod_6733 [Methylobacterium nodulans ORS 2060]
gi|219951101|gb|ACL61493.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 108
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ--IR 68
L R+ A ID E + + D N K + L EL+ L E+ D +
Sbjct: 4 ASLTRLEATIDAETEAQLTRAPIDQDEFNRRKSQSLLELTRLSRHREDAGPDPDLAACLA 63
Query: 69 TLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111
L +KLA N ++ +L A V+++ L+ ++DGTY
Sbjct: 64 RLRDKLARNQEVVALHLRAVEEVSEVIATALRAAESDGTYTAA 106
>gi|188579936|ref|YP_001923381.1| hypothetical protein Mpop_0668 [Methylobacterium populi BJ001]
gi|179343434|gb|ACB78846.1| conserved hypothetical protein [Methylobacterium populi BJ001]
Length = 114
Score = 80.4 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 45/100 (45%), Gaps = 2/100 (2%)
Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILS--CEEISWDHLEQIRTL 70
LKR+ A ++ E + L N+ D+ N K R L EL+ L I + + L
Sbjct: 6 LKRLEATVEAETEALAANAPLDLGAVNRAKSRSLLELTRLARGIDAANIDAETGIVLARL 65
Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHD 110
+KL N + +L A V + + LQ ++DGTY
Sbjct: 66 RDKLIRNQEAVALHLRAVEEVGETLQASLQAAESDGTYSA 105
>gi|256042854|ref|ZP_05445800.1| hypothetical protein Bmelb1R_00120 [Brucella melitensis bv. 1 str.
Rev.1]
gi|260564092|ref|ZP_05834577.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|265989290|ref|ZP_06101847.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
gi|260151735|gb|EEW86828.1| conserved hypothetical protein [Brucella melitensis bv. 1 str. 16M]
gi|262999959|gb|EEZ12649.1| conserved hypothetical protein [Brucella melitensis bv. 1 str.
Rev.1]
Length = 158
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DHLEQ 66
++R+ VI+ E + L D++ N K R L++ + I + +
Sbjct: 46 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGLQPF 105
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 106 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148
>gi|225686875|ref|YP_002734847.1| hypothetical protein BMEA_B1122 [Brucella melitensis ATCC 23457]
gi|256112187|ref|ZP_05453108.1| hypothetical protein Bmelb3E_05797 [Brucella melitensis bv. 3 str.
Ether]
gi|256261990|ref|ZP_05464522.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
gi|265993614|ref|ZP_06106171.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|225642980|gb|ACO02893.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|262764484|gb|EEZ10516.1| conserved hypothetical protein [Brucella melitensis bv. 3 str.
Ether]
gi|263091474|gb|EEZ16010.1| conserved hypothetical protein [Brucella melitensis bv. 2 str.
63/9]
Length = 158
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DHLEQ 66
++R+ VI+ E + L D++ N K R L++ + I + +
Sbjct: 46 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGLQPF 105
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 106 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148
>gi|23500843|ref|NP_700283.1| hypothetical protein BRA1128 [Brucella suis 1330]
gi|161621171|ref|YP_001595057.1| hypothetical protein BCAN_B1157 [Brucella canis ATCC 23365]
gi|254699253|ref|ZP_05161081.1| hypothetical protein Bsuib55_00087 [Brucella suis bv. 5 str. 513]
gi|254702372|ref|ZP_05164200.1| hypothetical protein Bsuib36_00070 [Brucella suis bv. 3 str. 686]
gi|254706507|ref|ZP_05168335.1| hypothetical protein BpinM_05857 [Brucella pinnipedialis
M163/99/10]
gi|254711208|ref|ZP_05173019.1| hypothetical protein BpinB_13295 [Brucella pinnipedialis B2/94]
gi|256015887|ref|YP_003105896.1| hypothetical protein BMI_II1134 [Brucella microti CCM 4915]
gi|256030163|ref|ZP_05443777.1| hypothetical protein BpinM2_05865 [Brucella pinnipedialis
M292/94/1]
gi|256059815|ref|ZP_05450010.1| hypothetical protein Bneo5_05660 [Brucella neotomae 5K33]
gi|256158342|ref|ZP_05456246.1| hypothetical protein BcetM4_05797 [Brucella ceti M490/95/1]
gi|256252724|ref|ZP_05458260.1| hypothetical protein BcetB_00085 [Brucella ceti B1/94]
gi|260166785|ref|ZP_05753596.1| hypothetical protein BruF5_00070 [Brucella sp. F5/99]
gi|260568725|ref|ZP_05839194.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|261219802|ref|ZP_05934083.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261313962|ref|ZP_05953159.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261318799|ref|ZP_05957996.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261323795|ref|ZP_05962992.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261749691|ref|ZP_05993400.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261752935|ref|ZP_05996644.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|261756162|ref|ZP_05999871.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|265987194|ref|ZP_06099751.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
gi|265996857|ref|ZP_06109414.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|23464506|gb|AAN34288.1| conserved hypothetical protein [Brucella suis 1330]
gi|161337982|gb|ABX64286.1| Hypothetical protein BCAN_B1157 [Brucella canis ATCC 23365]
gi|255998547|gb|ACU50234.1| hypothetical protein BMI_II1134 [Brucella microti CCM 4915]
gi|260155390|gb|EEW90471.1| conserved hypothetical protein [Brucella suis bv. 4 str. 40]
gi|260918386|gb|EEX85039.1| conserved hypothetical protein [Brucella ceti B1/94]
gi|261298022|gb|EEY01519.1| conserved hypothetical protein [Brucella pinnipedialis B2/94]
gi|261299775|gb|EEY03272.1| conserved hypothetical protein [Brucella neotomae 5K33]
gi|261302988|gb|EEY06485.1| conserved hypothetical protein [Brucella pinnipedialis M163/99/10]
gi|261736146|gb|EEY24142.1| conserved hypothetical protein [Brucella sp. F5/99]
gi|261739444|gb|EEY27370.1| conserved hypothetical protein [Brucella suis bv. 5 str. 513]
gi|261742688|gb|EEY30614.1| conserved hypothetical protein [Brucella suis bv. 3 str. 686]
gi|262551154|gb|EEZ07315.1| conserved hypothetical protein [Brucella ceti M490/95/1]
gi|264659391|gb|EEZ29652.1| conserved hypothetical protein [Brucella pinnipedialis M292/94/1]
Length = 158
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DHLEQ 66
++R+ VI+ E + L D++ N K R L++ + I + +
Sbjct: 46 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAAPATMKGLQPF 105
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 106 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148
>gi|148558381|ref|YP_001257993.1| hypothetical protein BOV_A1033 [Brucella ovis ATCC 25840]
gi|225628418|ref|ZP_03786452.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
gi|148369666|gb|ABQ62538.1| conserved hypothetical protein [Brucella ovis ATCC 25840]
gi|225616264|gb|EEH13312.1| Hypothetical protein, conserved [Brucella ceti str. Cudo]
Length = 175
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DHLEQ 66
++R+ VI+ E + L D++ N K R L++ + I + +
Sbjct: 63 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAAPATMKGLQPF 122
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 123 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 165
>gi|326411291|gb|ADZ68355.1| conserved hypothetical protein [Brucella melitensis M28]
gi|326554580|gb|ADZ89219.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 164
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DHLEQ 66
++R+ VI+ E + L D++ N K R L++ + I + +
Sbjct: 52 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGLQPF 111
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 112 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 154
>gi|62317947|ref|YP_223800.1| hypothetical protein BruAb2_1065 [Brucella abortus bv. 1 str.
9-941]
gi|83269924|ref|YP_419215.1| hypothetical protein BAB2_1085 [Brucella melitensis biovar Abortus
2308]
gi|189023198|ref|YP_001932939.1| hypothetical protein BAbS19_II10100 [Brucella abortus S19]
gi|254691623|ref|ZP_05154877.1| hypothetical protein Babob68_16092 [Brucella abortus bv. 6 str.
870]
gi|254695081|ref|ZP_05156909.1| hypothetical protein Babob3T_10593 [Brucella abortus bv. 3 str.
Tulya]
gi|254698178|ref|ZP_05160006.1| hypothetical protein Babob28_10825 [Brucella abortus bv. 2 str.
86/8/59]
gi|254731623|ref|ZP_05190201.1| hypothetical protein Babob42_10635 [Brucella abortus bv. 4 str.
292]
gi|256256810|ref|ZP_05462346.1| hypothetical protein Babob9C_05520 [Brucella abortus bv. 9 str.
C68]
gi|260544131|ref|ZP_05819952.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260757253|ref|ZP_05869601.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260759382|ref|ZP_05871730.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260762625|ref|ZP_05874957.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260883057|ref|ZP_05894671.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|261215433|ref|ZP_05929714.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
gi|62198140|gb|AAX76439.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941]
gi|82940198|emb|CAJ13251.1| conserved hypothetical protein [Brucella melitensis biovar Abortus
2308]
gi|189021772|gb|ACD74493.1| hypothetical protein BAbS19_II10100 [Brucella abortus S19]
gi|260097402|gb|EEW81276.1| conserved hypothetical protein [Brucella abortus NCTC 8038]
gi|260669700|gb|EEX56640.1| conserved hypothetical protein [Brucella abortus bv. 4 str. 292]
gi|260673046|gb|EEX59867.1| conserved hypothetical protein [Brucella abortus bv. 2 str.
86/8/59]
gi|260677361|gb|EEX64182.1| conserved hypothetical protein [Brucella abortus bv. 6 str. 870]
gi|260872585|gb|EEX79654.1| conserved hypothetical protein [Brucella abortus bv. 9 str. C68]
gi|260917040|gb|EEX83901.1| conserved hypothetical protein [Brucella abortus bv. 3 str. Tulya]
Length = 158
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DH 63
+ ++R+ VI+ E + L D++ N K R L++ + I + +
Sbjct: 43 LMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 102
Query: 64 LEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 103 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148
>gi|297250161|ref|ZP_06933862.1| hypothetical protein BAYG_02949 [Brucella abortus bv. 5 str. B3196]
gi|297174030|gb|EFH33394.1| hypothetical protein BAYG_02949 [Brucella abortus bv. 5 str. B3196]
Length = 164
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DH 63
+ ++R+ VI+ E + L D++ N K R L++ + I + +
Sbjct: 49 LMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 108
Query: 64 LEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 109 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 154
>gi|237817492|ref|ZP_04596483.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
gi|237787327|gb|EEP61544.1| Hypothetical protein, conserved [Brucella abortus str. 2308 A]
Length = 175
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DH 63
+ ++R+ VI+ E + L D++ N K R L++ + I + +
Sbjct: 60 LMRAIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGL 119
Query: 64 LEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 120 QPFLDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 165
>gi|170744555|ref|YP_001773210.1| hypothetical protein M446_6519 [Methylobacterium sp. 4-46]
gi|168198829|gb|ACA20776.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
Length = 107
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 30/99 (30%), Positives = 44/99 (44%), Gaps = 1/99 (1%)
Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEE-ISWDHLEQIRT 69
L R+ A ID E + L D N K + L EL+ L +E D +
Sbjct: 4 ASLTRLEATIDEETEALLTRRPIDQDEVNRRKSQSLLELTRLARHRDEPADPDLAACLTR 63
Query: 70 LHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
L +KLA N ++ L A V+++ L+ D+DGTY
Sbjct: 64 LRDKLARNQEVVALNLRAVEEVSEVIAGALRAADSDGTY 102
>gi|306845408|ref|ZP_07477982.1| Hypothetical protein BIBO1_2096 [Brucella sp. BO1]
gi|306274151|gb|EFM55967.1| Hypothetical protein BIBO1_2096 [Brucella sp. BO1]
Length = 158
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS-----WDHLEQ 66
++R+ VI+ E + L D++ N K R L++ + I + +
Sbjct: 46 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAEPATMKGLQPF 105
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 106 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148
>gi|254720783|ref|ZP_05182594.1| hypothetical protein Bru83_15042 [Brucella sp. 83/13]
gi|265985842|ref|ZP_06098577.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306840126|ref|ZP_07472911.1| Hypothetical protein BROD_2999 [Brucella sp. NF 2653]
gi|264664434|gb|EEZ34695.1| conserved hypothetical protein [Brucella sp. 83/13]
gi|306404771|gb|EFM61065.1| Hypothetical protein BROD_2999 [Brucella sp. NF 2653]
Length = 158
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS-----WDHLEQ 66
++R+ VI+ E + L D++ N K R L++ + I + +
Sbjct: 46 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAEPATMKGLQPF 105
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 106 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148
>gi|17988515|ref|NP_541148.1| putative cytoplasmic protein [Brucella melitensis bv. 1 str. 16M]
gi|17984308|gb|AAL53412.1| hypothetical cytosolic protein [Brucella melitensis bv. 1 str. 16M]
Length = 115
Score = 78.5 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DHLEQ 66
++R+ VI+ E + L D++ N K R L++ + I + +
Sbjct: 3 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAVPATMKGLQPF 62
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 63 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 105
>gi|163845447|ref|YP_001623102.1| hypothetical protein BSUIS_B1355 [Brucella suis ATCC 23445]
gi|163676170|gb|ABY40280.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
Length = 158
Score = 78.1 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 5/103 (4%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISW-----DHLEQ 66
++R+ VI+ E++ L D++ N K R L++ + I + +
Sbjct: 46 AIERLEDVIETESRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAAPATMKGLQPF 105
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 106 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 148
>gi|306841286|ref|ZP_07473997.1| Hypothetical protein BIBO2_1070 [Brucella sp. BO2]
gi|306288688|gb|EFM60019.1| Hypothetical protein BIBO2_1070 [Brucella sp. BO2]
Length = 164
Score = 77.7 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/103 (26%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS-----WDHLEQ 66
++R+ VI+ E + L D++ N K R L++ + I + +
Sbjct: 52 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAADTAEPATMKGLQPF 111
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L +KL N L+ +L A +ADL + L+ +ADGTY+
Sbjct: 112 LDRLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYN 154
>gi|163850134|ref|YP_001638177.1| hypothetical protein Mext_0694 [Methylobacterium extorquens PA1]
gi|254559279|ref|YP_003066374.1| hypothetical protein METDI0675 [Methylobacterium extorquens DM4]
gi|163661739|gb|ABY29106.1| conserved hypothetical protein [Methylobacterium extorquens PA1]
gi|254266557|emb|CAX22321.1| conserved hypothetical protein [Methylobacterium extorquens DM4]
Length = 114
Score = 77.4 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 2/106 (1%)
Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EISWDHLEQIRTL 70
LKR+ A ++ E + L N+ D+ N K R L EL+ L + + + + L
Sbjct: 6 LKRLEATVEAETEALSANAALDLDAVNRAKSRSLLELTRLARGLDVATLDAETGIVLARL 65
Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCESL 116
+KL N + +L A V + + LQ ++DGTY L
Sbjct: 66 RDKLIRNQEAVALHLRAVEEVGETLQASLQAAESDGTYSARLSAHL 111
>gi|218528738|ref|YP_002419554.1| hypothetical protein Mchl_0705 [Methylobacterium chloromethanicum
CM4]
gi|240137268|ref|YP_002961737.1| hypothetical protein MexAM1_META1p0519 [Methylobacterium extorquens
AM1]
gi|218521041|gb|ACK81626.1| conserved hypothetical protein [Methylobacterium chloromethanicum
CM4]
gi|240007234|gb|ACS38460.1| conserved hypothetical protein [Methylobacterium extorquens AM1]
Length = 110
Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE--EISWDHLEQIRTL 70
LKR+ A ++ E + L N+ D+ N K R L EL+ L + + + + L
Sbjct: 6 LKRLEATVEAETEALSANAALDLDAVNRAKSRSLLELTRLARGLDVATLDAETGIVLARL 65
Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHD 110
+KL N + +L A V + + LQ ++DGTY
Sbjct: 66 RDKLIRNQEAVALHLRAVEEVGETLQASLQAAESDGTYSA 105
>gi|153011497|ref|YP_001372711.1| hypothetical protein Oant_4182 [Ochrobactrum anthropi ATCC 49188]
gi|151563385|gb|ABS16882.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 156
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS-----WDHLEQ 66
++R+ VID E + L D++ N K R L++ + I +
Sbjct: 44 AIQRLEDVIDTETRLLLEGGNPDLAEINSRKSRGLYDFNKAIKKAASAAEPATMKRLQPL 103
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ +L +KL N L+ +L A +ADL + L+ +ADGTY
Sbjct: 104 LDSLKQKLERNCEALQLHLRAVGELADLIRGALETQEADGTYS 146
>gi|118589955|ref|ZP_01547359.1| hypothetical protein SIAM614_14860 [Stappia aggregata IAM 12614]
gi|118437452|gb|EAV44089.1| hypothetical protein SIAM614_14860 [Stappia aggregata IAM 12614]
Length = 142
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVL--ILSCEEISWDHLEQIRT 69
++R I + +E + L+ N D+ I K + L +L+ ++ S + E +
Sbjct: 35 AVRRAIGAVLDETRALRANPTADLKIFEYGKSQALLDLARARSLVPPAFYSHELREDLAD 94
Query: 70 LHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDGFCE 114
+ L N LL+ +++A V + + + + ++DGTY F E
Sbjct: 95 FKDVLDENIGLLQLHMNAVSEVVGMMSRTMIDYESDGTYEAPFPE 139
>gi|170748114|ref|YP_001754374.1| hypothetical protein Mrad2831_1696 [Methylobacterium radiotolerans
JCM 2831]
gi|170654636|gb|ACB23691.1| conserved hypothetical protein [Methylobacterium radiotolerans JCM
2831]
Length = 111
Score = 73.5 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 2/105 (1%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL--SCEEISWDHLEQ 66
+ + L R+ A ID E L + D N K + L E + L +S ++
Sbjct: 2 LLSSLNRLEATIDAETTALTVHDLRDQDEFNRRKSQSLVEFARLGRAVDAANLSAAEIDG 61
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHDG 111
+ + KL N LL +L A + V+D+ ++ ++DGTY
Sbjct: 62 LERVRAKLRRNHELLGIHLRAMQEVSDIVATMIRSAESDGTYSAA 106
>gi|323136990|ref|ZP_08072070.1| hypothetical protein Met49242DRAFT_1457 [Methylocystis sp. ATCC
49242]
gi|322397751|gb|EFY00273.1| hypothetical protein Met49242DRAFT_1457 [Methylocystis sp. ATCC
49242]
Length = 139
Score = 73.5 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILS-CEEISWDHLEQIRTLH 71
++R+ +ID E + L++ ++ D N K L E + + + S +++ L
Sbjct: 35 VERLEDLIDAETQVLRSCARIDFEALNLRKTHALLEFTRVARNLPPRASSLAQQRLNRLV 94
Query: 72 EKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
EKL N+ L+ +L A + + L + ++ ++DGTY
Sbjct: 95 EKLGSNTEALQLHLHAMQEITCLIVESIRSDESDGTYS 132
>gi|239834416|ref|ZP_04682744.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
gi|239822479|gb|EEQ94048.1| Hypothetical protein, conserved [Ochrobactrum intermedium LMG 3301]
Length = 160
Score = 73.1 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 28/103 (27%), Positives = 46/103 (44%), Gaps = 5/103 (4%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEIS-----WDHLEQ 66
++R+ VID E + L D++ N K R L++ + I +
Sbjct: 48 AIQRLEDVIDTETRLLLEGGNPDLAEINARKSRGLYDFNKAIKKAAGAAEPATMKPLQPL 107
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ +L KL N L+ +L A +ADL + L+ +ADGTY
Sbjct: 108 LDSLKHKLEKNCEALQLHLRAVGELADLIRGALETQEADGTYS 150
>gi|182680485|ref|YP_001834631.1| hypothetical protein Bind_3586 [Beijerinckia indica subsp. indica
ATCC 9039]
gi|182636368|gb|ACB97142.1| hypothetical protein Bind_3586 [Beijerinckia indica subsp. indica
ATCC 9039]
Length = 147
Score = 71.2 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/104 (22%), Positives = 45/104 (43%), Gaps = 2/104 (1%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDH--LEQ 66
+ + R+ ++ E K L+ N + N K + L EL +I E ++ E+
Sbjct: 34 LVNAIDRLETIVMQETKILRENCAISLQDFNHQKTQGLLELRRVIRGLEGTRFETEIQER 93
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHD 110
L L N L+++L A + + + ++ ++DGTY
Sbjct: 94 FAHLRAVLDYNLQALKNHLTAIEGITETIIETVKSYESDGTYSA 137
>gi|296445185|ref|ZP_06887145.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
gi|296257359|gb|EFH04426.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
Length = 143
Score = 67.7 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLIL--SCEEISWDHLEQIRTL 70
+ R+ +I+ E+ L+ D N K L E S + + L
Sbjct: 38 VDRLARLIELESAALRERRAIDFEEFNSRKAHALLEFSRASRAFGATRSAPSVEAALTRL 97
Query: 71 HEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
++LA N+ LL+ L A R +A + ++ D+DGTY
Sbjct: 98 RDRLAENAELLDDRLRAMREIAGIMIYTIEMADSDGTYS 136
>gi|319406961|emb|CBI80598.1| conserved hypothetical protein [Bartonella sp. 1-1C]
Length = 149
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 8 RIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE-----EISWD 62
+ +K + V+D E+ L+N+ D N K R L +L+ + + +I +
Sbjct: 33 KFNAAIKGLAEVVDYESNMLENHGAPDYEEINLRKTRGLRDLNKSMNDVKRYMDQDIEIE 92
Query: 63 HLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+ L EKL NS LL +L+A R ++ + + ++ + DGTY+
Sbjct: 93 VQTLLTDLQEKLNRNSELLRIHLEAVRDLSQIIQVAVRAEETDGTYN 139
>gi|217976251|ref|YP_002360398.1| hypothetical protein Msil_0053 [Methylocella silvestris BL2]
gi|217501627|gb|ACK49036.1| conserved hypothetical protein [Methylocella silvestris BL2]
Length = 119
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 42/104 (40%), Gaps = 5/104 (4%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQ----- 66
++R+ I E L N+ + N K L EL I +C+ + E+
Sbjct: 7 AIERLERTITLETGALDRNNLAALHEFNHMKSHGLLELKRAIDACQTVDRATFEEEAKAA 66
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHD 110
+ KL N L L A +A + + +++ ++DGTY
Sbjct: 67 LAGFRAKLERNLDGLRMQLRAVSEIASIIARAIEDHESDGTYTA 110
>gi|319403944|emb|CBI77532.1| conserved hypothetical protein [Bartonella rochalimae ATCC
BAA-1498]
Length = 147
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/106 (26%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 8 RIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE-----EISWD 62
+ +K + V+D E+ L+N+ D N K R L +L+ + + +I +
Sbjct: 31 KFNAAIKGLAEVVDYESNMLENHGAPDYEEINLRKTRGLRDLNKSMNDVKRYMDQDIEIE 90
Query: 63 HLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
+ L EKL NS LL +L+A R ++ + + ++ + DGTY
Sbjct: 91 IQSLLTDLQEKLNRNSELLRIHLEAVRDLSQIMQVAVRAEETDGTY 136
>gi|319898620|ref|YP_004158713.1| hypothetical protein BARCL_0448 [Bartonella clarridgeiae 73]
gi|319402584|emb|CBI76129.1| conserved protein of unknown function [Bartonella clarridgeiae 73]
Length = 147
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 5/106 (4%)
Query: 8 RIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE-----EISWD 62
++ +K + V+D E+ L+N+ D N K R L +L+ + + +I +
Sbjct: 31 KLTAAIKGLSEVVDYESNVLENHGVPDYEEINLRKTRGLRDLNKSMNDVKRYMDQDIEAE 90
Query: 63 HLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
+ +L +KL NS LL +L+A R ++ + + + + DGTY
Sbjct: 91 IQPLLTSLQDKLNRNSELLRIHLEAVRDLSRIMQVAARAEETDGTY 136
>gi|319405385|emb|CBI79004.1| conserved hypothetical protein [Bartonella sp. AR 15-3]
Length = 147
Score = 65.4 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 8 RIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE-----EISWD 62
+ +K + V+D E+ L+N+ D N K R L +L+ + + +I +
Sbjct: 31 KFNAAIKGLSEVVDYESNMLENHGSPDYEEINLRKTRGLRDLNKSMKDVKRYMDQDIEIE 90
Query: 63 HLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
+ L EKL NS LL +L+A + ++ + + + + DGTY
Sbjct: 91 VQRLLTDLQEKLNRNSELLRIHLEAVKDLSQIMRVAARAEETDGTY 136
>gi|114705547|ref|ZP_01438450.1| hypothetical protein FP2506_13814 [Fulvimarina pelagi HTCC2506]
gi|114538393|gb|EAU41514.1| hypothetical protein FP2506_13814 [Fulvimarina pelagi HTCC2506]
Length = 117
Score = 63.1 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/104 (23%), Positives = 51/104 (49%), Gaps = 2/104 (1%)
Query: 9 IQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILS--CEEISWDHLEQ 66
+ R+ AV+ E++ L ++ D+ + K + L EL+ L E + + E+
Sbjct: 5 LHNAADRLEAVLSRESEALAQSNGIDLVETAGRKNQSLLELTRLTRGLSPETLDGETRER 64
Query: 67 IRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHD 110
+ L +LA N ++L ++ A+ ++ + K + ++DGTY
Sbjct: 65 LLVLRRRLAENQAVLSQHVKASHEISTIMAKSIAAAESDGTYSS 108
>gi|312115269|ref|YP_004012865.1| hypothetical protein Rvan_2551 [Rhodomicrobium vannielii ATCC
17100]
gi|311220398|gb|ADP71766.1| hypothetical protein Rvan_2551 [Rhodomicrobium vannielii ATCC
17100]
Length = 118
Score = 62.3 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVL--ILSCEEISWDHLEQIRT 69
LKR++ +D ENK L I + K L EL + +S + + D +
Sbjct: 14 ALKRLVRTLDAENKALVALDARHIGEFSAAKTESLLELHHIGISISAQTLPDDLRPLVDL 73
Query: 70 LHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
+KL LN LL +L+AAR + + + ++DGTY
Sbjct: 74 ARQKLDLNQWLLLMHLEAARAITATIMHAICDSESDGTYS 113
>gi|304392483|ref|ZP_07374423.1| conserved hypothetical protein [Ahrensia sp. R2A130]
gi|303295113|gb|EFL89473.1| conserved hypothetical protein [Ahrensia sp. R2A130]
Length = 143
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 7/107 (6%)
Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILS-------CEEISWDH 63
+V+ R++A++D E+ ++ ++ + K R L E++ L + +
Sbjct: 20 SVVDRLVALLDAESALIEAGETGGLADTTLAKSRMLLEINRLSTGHNDHGNSGNDQAVPT 79
Query: 64 LEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYHD 110
+I L L N L + L AAR V+D+ L+E +D TY +
Sbjct: 80 RAEIVGLKRSLERNERALAAQLSAARTVSDMVTNALREQQSDTTYSN 126
>gi|121601993|ref|YP_989415.1| hypothetical protein BARBAKC583_1156 [Bartonella bacilliformis
KC583]
gi|120614170|gb|ABM44771.1| conserved hypothetical protein [Bartonella bacilliformis KC583]
Length = 147
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 50/106 (47%), Gaps = 5/106 (4%)
Query: 8 RIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC-----EEISWD 62
+ +K ++ V++ E+ L+++ D N K R L +L+ + + +
Sbjct: 31 KFMAAVKGLVEVVEYESMMLESHGTPDYEEVNLRKTRGLRDLNQSMKDVARYMDSNVETE 90
Query: 63 HLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
+ L KL NS LL+++L+A R ++ + + + D DGTY
Sbjct: 91 VANALSDLQVKLHRNSELLQTHLEAVRELSQIVQMAARAEDTDGTY 136
>gi|319409202|emb|CBI82846.1| conserved hypothetical protein [Bartonella schoenbuchensis R1]
Length = 147
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/106 (22%), Positives = 49/106 (46%), Gaps = 5/106 (4%)
Query: 8 RIQTVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC-----EEISWD 62
+ +K + V+D E+ L+++ D N K R L +L+ + +++
Sbjct: 31 KFMAAVKGLTEVVDYESNMLESHGVPDYEEVNLRKTRGLRDLNQSMKDVMRYLDQDVENK 90
Query: 63 HLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
+ L KL NS LL+ +L+A + ++ + + + + DGTY
Sbjct: 91 IESLLSDLQGKLQRNSELLQVHLEAVKELSQIMQTVARAEETDGTY 136
>gi|49474570|ref|YP_032612.1| hypothetical protein BQ10440 [Bartonella quintana str. Toulouse]
gi|49240074|emb|CAF26511.1| hypothetical protein BQ10440 [Bartonella quintana str. Toulouse]
Length = 133
Score = 49.2 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC-----EEISWDHLE 65
+K + VID E+ L+++ D N K R L +L+ + E+IS +
Sbjct: 34 AAVKGLAQVIDYESNMLESSGIPDYEEINLCKTRGLRDLNKSMSDIKRYMNEDISSEIES 93
Query: 66 QIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDAD 105
+ L EKL NS LL+ +LDA ++ + + +AD
Sbjct: 94 LLSDLQEKLHRNSELLQIHLDAVNDLSQDIQTAARTKEAD 133
>gi|49476004|ref|YP_034045.1| hypothetical protein BH13190 [Bartonella henselae str. Houston-1]
gi|49238812|emb|CAF28092.1| hypothetical protein BH13190 [Bartonella henselae str. Houston-1]
Length = 147
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 44/100 (44%), Gaps = 5/100 (5%)
Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC-----EEISWDHLE 65
+K + VID E+ L+N+ D N K R L +L+ I E+I +
Sbjct: 34 AAVKNLAQVIDYESNMLENSGVPDYEEINVCKTRGLSDLNKSIGDIKRYMNEDIENEVES 93
Query: 66 QIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDAD 105
+ L EKL NS LL+ +LDA ++ + + D
Sbjct: 94 LLSDLQEKLRRNSELLKIHLDAVNDLSYAMQTASCTKEMD 133
>gi|240850945|ref|YP_002972345.1| hypothetical protein Bgr_14620 [Bartonella grahamii as4aup]
gi|240268068|gb|ACS51656.1| hypothetical protein Bgr_14620 [Bartonella grahamii as4aup]
Length = 134
Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE-----EISWDHLE 65
+K + V+D E+ L+++ D N K R L +L+ + + +I +
Sbjct: 34 AAVKGLAQVVDYESNMLESSGVPDYEEINLCKIRGLRDLNKSMSDVKRYMNQDIEHEVES 93
Query: 66 QIRTLHEKLALNSSLLESYLDAARVVA 92
+ L EKL NS LL+++L+A ++
Sbjct: 94 LLSDLQEKLQRNSELLQTHLNAVNDLS 120
>gi|163868766|ref|YP_001609990.1| hypothetical protein Btr_1672 [Bartonella tribocorum CIP 105476]
gi|161018437|emb|CAK01995.1| conserved hypothetical protein [Bartonella tribocorum CIP 105476]
Length = 134
Score = 36.9 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 5/87 (5%)
Query: 11 TVLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE-----EISWDHLE 65
+K + V+D E+ L+++ D N K R L +L+ + +I +
Sbjct: 34 AAVKGLAQVVDYESNMLESSGIPDYEEINLCKIRGLRDLNKSMSDVRRYMNQDIEHEVES 93
Query: 66 QIRTLHEKLALNSSLLESYLDAARVVA 92
+ L EKL NS LL++ L+A ++
Sbjct: 94 LLSDLQEKLQRNSELLQTNLNAVNDLS 120
>gi|302839996|ref|XP_002951554.1| hypothetical protein VOLCADRAFT_105158 [Volvox carteri f.
nagariensis]
gi|300263163|gb|EFJ47365.1| hypothetical protein VOLCADRAFT_105158 [Volvox carteri f.
nagariensis]
Length = 1552
Score = 36.1 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 22/101 (21%), Positives = 35/101 (34%), Gaps = 11/101 (10%)
Query: 30 NSQFDISISNDHKGR-CLHELSVLILSCEEISWDHLEQIRTLHEKLALNSSLLESYLDAA 88
Q D + S + LH L + + D E++ + KLA + S +A
Sbjct: 763 RQQVDAAQSEAASNQLSLHALQQQLEASRGREADLSEELTAMQGKLAEAARSHTSNTEAV 822
Query: 89 RVVADLFKKQ----------LQEIDADGTYHDGFCESLNPC 119
V+ + LQ DA G+Y G + L
Sbjct: 823 DVLESALQTARQQYESALTELQRADAAGSYSLGLLDRLEAA 863
>gi|144900941|emb|CAM77805.1| conserved hypothetical protein [Magnetospirillum gryphiswaldense
MSR-1]
Length = 155
Score = 36.1 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 22/110 (20%), Positives = 39/110 (35%), Gaps = 12/110 (10%)
Query: 13 LKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSCE-----------EISW 61
+ + +I EN L ++ S++ K E + L E
Sbjct: 27 VTELAEIIAGENMALAQGYPAGLAASSERKTELAAEYAELWEDFGPGGAAALAADPEFGH 86
Query: 62 DHLEQIRTLHEKLALNSSLLESYLDAARV-VADLFKKQLQEIDADGTYHD 110
+E +R L N + LE+ + A+R V + + Q+ GTY
Sbjct: 87 ALMEAVRQLRHGAQENITRLEAAMTASRRRVEAVLEALRQDARTSGTYGA 136
>gi|326330176|ref|ZP_08196487.1| putative serine/arginine repetitive matrix protein 2
[Nocardioidaceae bacterium Broad-1]
gi|325951989|gb|EGD44018.1| putative serine/arginine repetitive matrix protein 2
[Nocardioidaceae bacterium Broad-1]
Length = 798
Score = 36.1 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 21/121 (17%)
Query: 4 SSDYRIQTVLKRVIAV-------IDNENKNLKNNSQFDISISNDHKGRCLHELSVLILSC 56
S DY Q V++ + V +DNE + + + + H R + VLIL
Sbjct: 522 SGDYVAQRVIRALELVGCPYIDQVDNEARR-SLRPEGAVRLVTYHSSRGVEASRVLILGF 580
Query: 57 EEISWDHLEQIRTLHE-------------KLALNSSLLESYLDAARVVADLFKKQLQEID 103
EE+ + +LA++++ +LD + A +++L+ +
Sbjct: 581 EELGRSMGGPLARQRNLAYVTLTRAKFGCRLAVSAARTGPHLDFVQAAAGAVRRELELAE 640
Query: 104 A 104
+
Sbjct: 641 S 641
>gi|209963553|ref|YP_002296468.1| hypothetical protein RC1_0206 [Rhodospirillum centenum SW]
gi|209957019|gb|ACI97655.1| hypothetical protein RC1_0206 [Rhodospirillum centenum SW]
Length = 187
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 15/40 (37%)
Query: 69 TLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTY 108
L + N + + DA VA ++ +DG Y
Sbjct: 127 RLRGAVETNRRAIRAAQDAVSAVAGHIAAAVERSRSDGVY 166
>gi|254425835|ref|ZP_05039552.1| Stage II sporulation protein E [Synechococcus sp. PCC 7335]
gi|196188258|gb|EDX83223.1| Stage II sporulation protein E [Synechococcus sp. PCC 7335]
Length = 707
Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 61 WDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDA-DGTYHDGFCESLN 117
+QI L+EKL + + + LDA R + L + +E+D+ DG GF E +
Sbjct: 442 AGANQQITRLNEKLKNENLRMSAELDAVRQIQQLILPRTEELDSVDGLDIAGFMEPAD 499
>gi|288962668|ref|YP_003452962.1| hypothetical protein AZL_e00730 [Azospirillum sp. B510]
gi|288914934|dbj|BAI76418.1| hypothetical protein AZL_e00730 [Azospirillum sp. B510]
Length = 172
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 19/106 (17%), Positives = 42/106 (39%), Gaps = 8/106 (7%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLHEL----SVL----ILSCEEISWDH 63
++ + AV++ E+ + + K +L + I +++
Sbjct: 47 AVEALAAVLEEESACIAVGMLDRLEAFAHRKAAMAEQLEGAVTRARDEGIRLPDDLRAMT 106
Query: 64 LEQIRTLHEKLALNSSLLESYLDAARVVADLFKKQLQEIDADGTYH 109
LE+I L +++N+S L + A + L++ +DGTY
Sbjct: 107 LERIDRLERAVSVNASGLVALRKAVLTINRNLLAALEKASSDGTYA 152
>gi|149030822|gb|EDL85849.1| rCG37452 [Rattus norvegicus]
Length = 694
Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 12/66 (18%), Positives = 25/66 (37%), Gaps = 9/66 (13%)
Query: 16 VIAVIDNENKNLKNNSQFDISIS---------NDHKGRCLHELSVLILSCEEISWDHLEQ 66
+ ++ E K+ I +S + K R L++L+V I+ + +
Sbjct: 91 MEDKLEAETPQPKDRPGLQIKVSVTPKTHSWADIRKERGLYQLTVAIILMSRVCKMFRQG 150
Query: 67 IRTLHE 72
+R E
Sbjct: 151 LRGFRE 156
>gi|319892877|ref|YP_004149752.1| DNA repair exonuclease family protein YhaO [Staphylococcus
pseudintermedius HKU10-03]
gi|317162573|gb|ADV06116.1| DNA repair exonuclease family protein YhaO [Staphylococcus
pseudintermedius HKU10-03]
gi|323464090|gb|ADX76243.1| DNA repair exonuclease family protein [Staphylococcus
pseudintermedius ED99]
Length = 395
Score = 34.6 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 4/61 (6%)
Query: 23 ENKNLKNNSQF----DISISNDHKGRCLHELSVLILSCEEISWDHLEQIRTLHEKLALNS 78
E +++ + F D H+GR + L + I E IS LEQ++ L + N
Sbjct: 256 ETEDISQQALFELIQDFKARVRHQGRAFYRLQLNIRGDEMISPQVLEQLKVLSTEYEENE 315
Query: 79 S 79
Sbjct: 316 R 316
>gi|302669117|ref|YP_003832942.1| anaerobic ribonucleoside triphosphate reductase NrdD3 [Butyrivibrio
proteoclasticus B316]
gi|302397457|gb|ADL36360.1| anaerobic ribonucleoside triphosphate reductase NrdD3 [Butyrivibrio
proteoclasticus B316]
Length = 751
Score = 33.8 bits (76), Expect = 7.0, Method: Composition-based stats.
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 8/73 (10%)
Query: 2 STSSDYRIQTVLKRVIAVIDNENKN---LKNNSQFDISISNDHKGRCLHELSVLILSCEE 58
+ ++D I ++++R + EN N ++N++Q D K +L++ +L +E
Sbjct: 95 ANTTDETILSLIERDNEEVKQENSNKNPIRNSTQRDYMAGEVSK-----DLTMRMLLPDE 149
Query: 59 ISWDHLEQIRTLH 71
I H E + H
Sbjct: 150 IVKAHKEGVIHFH 162
>gi|163785934|ref|ZP_02180382.1| hypothetical protein FBALC1_12152 [Flavobacteriales bacterium
ALC-1]
gi|159877794|gb|EDP71850.1| hypothetical protein FBALC1_12152 [Flavobacteriales bacterium
ALC-1]
Length = 391
Score = 33.8 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 19/99 (19%), Positives = 40/99 (40%), Gaps = 10/99 (10%)
Query: 17 IAVIDNENKNLKNNSQFDISISNDHKGRCLHELSV---------LILSCEEISWDHLEQI 67
+ID E + N + D+S++N++ R + +++ LS + ++ +
Sbjct: 237 DMIIDKEEREFLNRLKTDLSLNNENIARSVDDINQFYNEHKEDVAFLSSKNLAQSFYDNS 296
Query: 68 RTLHEKL-ALNSSLLESYLDAARVVADLFKKQLQEIDAD 105
+ KL NS L L ++ L + Q +D
Sbjct: 297 SKVVSKLIKRNSKRLIKELSESKEAMSLLAQSTQRNLSD 335
>gi|261216565|ref|ZP_05930846.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261319436|ref|ZP_05958633.1| conserved hypothetical protein [Brucella ceti M644/93/1]
gi|260921654|gb|EEX88222.1| conserved hypothetical protein [Brucella ceti M13/05/1]
gi|261292126|gb|EEX95622.1| conserved hypothetical protein [Brucella ceti M644/93/1]
Length = 81
Score = 33.8 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 17/36 (47%)
Query: 12 VLKRVIAVIDNENKNLKNNSQFDISISNDHKGRCLH 47
++R+ VI+ E + L D++ N K R L
Sbjct: 46 AIERLEDVIETETRLLLEGGNPDLAEINARKSRGLL 81
>gi|284044825|ref|YP_003395165.1| exodeoxyribonuclease V, subunit gamma [Conexibacter woesei DSM
14684]
gi|283949046|gb|ADB51790.1| exodeoxyribonuclease V, gamma subunit [Conexibacter woesei DSM
14684]
Length = 1143
Score = 33.8 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 21/99 (21%), Positives = 35/99 (35%), Gaps = 11/99 (11%)
Query: 25 KNLKNNSQFDISISNDHKGRCLHELSVLILSCEEISWDHLEQIRTLHEKLALNSSLLESY 84
+ + S D + R L L L+ + + +W + L L +
Sbjct: 78 EAIAAASGLDAATDPWRPERALWPLLELVDAASDEAW-----LGRLTAHLDRAAGDRSRR 132
Query: 85 LDAARVVADLFKK------QLQEIDADGTYHDGFCESLN 117
L A R VA LF + + A G+ DG +L+
Sbjct: 133 LSAVRHVATLFARYALHRPAMLRAWAAGSDEDGAGGALD 171
>gi|62175869|gb|AAX69995.1| variant surface glycoprotein (VSG), putative [Trypanosoma brucei]
Length = 473
Score = 33.4 bits (75), Expect = 9.2, Method: Composition-based stats.
Identities = 12/65 (18%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Query: 37 ISNDHKGRCLHELSVLILSCEEISWDHLEQIRTLHEKLALNSSLLESYLDAARVVADLFK 96
+ D + RCL+ + L + ++++ K+ L+E ++ A + +L K
Sbjct: 77 TATDRQQRCLY--TALFFKASNLHRSQTQKVKNTRTKIGHALQLIERHVGAINAIQELAK 134
Query: 97 KQLQE 101
++ E
Sbjct: 135 TKVTE 139
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.311 0.139 0.357
Lambda K H
0.267 0.0424 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,026,387,872
Number of Sequences: 14124377
Number of extensions: 66014396
Number of successful extensions: 254427
Number of sequences better than 10.0: 138
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 254189
Number of HSP's gapped (non-prelim): 259
length of query: 123
length of database: 4,842,793,630
effective HSP length: 89
effective length of query: 34
effective length of database: 3,585,724,077
effective search space: 121914618618
effective search space used: 121914618618
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 76 (33.8 bits)