HHsearch alignment for GI: 254780509 and conserved domain: PRK12708
>PRK12708 flgJ peptidoglycan hydrolase; Reviewed.
Probab=99.77 E-value=5.8e-19 Score=123.90 Aligned_cols=82 Identities=11% Similarity=0.161 Sum_probs=70.6
Q ss_pred HHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 32312078999998702285547999999999999999999995102----11233575333689999999999999980
Q gi|254780509|r 25 DDSSFQSFLQLKDVQEACDKSKSVPEMTQKLQGIMFQYFIKSILPEE----TVKSLGGGFNGDFWQEILAENISDVIVKQ 100 (112)
Q Consensus 25 ~~~s~q~~~~Lk~~~~~~~~~~~l~~~a~~fEa~fl~~~lksmr~~~----~~~~lggg~a~d~~~sMl~ee~a~~iAk~ 100 (112)
T Consensus 5 ~~~~yl~~~~~~~l~k~n~e~~al~~va~QFE~~F~q~mlksMR~A~dal~~eD~p~nS~~~~~YrdM~DqQLA~~LS~~ 84 (134)
T PRK12708 5 NSSPYLPGLNAGDLIPQNLEQGALKLAAQQFEAQFLQTVLKQMRSASDVMADEDDPFNSKNQGMYRDFYDAELASRLSSQ 84 (134)
T ss_pred CCCCHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 77520102777778660453779999999999999999999999865430456885430578899999999999999866
Q ss_pred CCCCCC
Q ss_conf 798756
Q gi|254780509|r 101 QRITLD 106 (112)
Q Consensus 101 ggiGL~ 106 (112)
T Consensus 85 gg~GLA 90 (134)
T PRK12708 85 RSMGLA 90 (134)
T ss_pred CCCCHH
T ss_conf 896499