HHsearch alignment for GI: 254780509 and conserved domain: PRK12708

>PRK12708 flgJ peptidoglycan hydrolase; Reviewed.
Probab=99.77  E-value=5.8e-19  Score=123.90  Aligned_cols=82  Identities=11%  Similarity=0.161  Sum_probs=70.6

Q ss_pred             HHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC----CCCCCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf             32312078999998702285547999999999999999999995102----11233575333689999999999999980
Q gi|254780509|r   25 DDSSFQSFLQLKDVQEACDKSKSVPEMTQKLQGIMFQYFIKSILPEE----TVKSLGGGFNGDFWQEILAENISDVIVKQ  100 (112)
Q Consensus        25 ~~~s~q~~~~Lk~~~~~~~~~~~l~~~a~~fEa~fl~~~lksmr~~~----~~~~lggg~a~d~~~sMl~ee~a~~iAk~  100 (112)
T Consensus         5 ~~~~yl~~~~~~~l~k~n~e~~al~~va~QFE~~F~q~mlksMR~A~dal~~eD~p~nS~~~~~YrdM~DqQLA~~LS~~   84 (134)
T PRK12708          5 NSSPYLPGLNAGDLIPQNLEQGALKLAAQQFEAQFLQTVLKQMRSASDVMADEDDPFNSKNQGMYRDFYDAELASRLSSQ   84 (134)
T ss_pred             CCCCHHCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf             77520102777778660453779999999999999999999999865430456885430578899999999999999866


Q ss_pred             CCCCCC
Q ss_conf             798756
Q gi|254780509|r  101 QRITLD  106 (112)
Q Consensus       101 ggiGL~  106 (112)
T Consensus        85 gg~GLA   90 (134)
T PRK12708         85 RSMGLA   90 (134)
T ss_pred             CCCCHH
T ss_conf             896499