BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780510|ref|YP_003064923.1| hypothetical protein
CLIBASIA_01985 [Candidatus Liberibacter asiaticus str. psy62]
(137 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780510|ref|YP_003064923.1| hypothetical protein CLIBASIA_01985 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040187|gb|ACT56983.1| hypothetical protein CLIBASIA_01985 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 137
Score = 275 bits (703), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/137 (100%), Positives = 137/137 (100%)
Query: 1 MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS
Sbjct: 1 MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
Query: 61 HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN
Sbjct: 61 HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
Query: 121 IEQRILFNAVSRKFMSL 137
IEQRILFNAVSRKFMSL
Sbjct: 121 IEQRILFNAVSRKFMSL 137
>gi|315122293|ref|YP_004062782.1| hypothetical protein CKC_02725 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495695|gb|ADR52294.1| hypothetical protein CKC_02725 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 137
Score = 196 bits (499), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 94/137 (68%), Positives = 117/137 (85%)
Query: 1 MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
MR R S+ L+K+++ Q C+K IAE NLAYTIS+ KKINILRE+L DS+ S AL NP+LA
Sbjct: 1 MRCRDSKTLHKLLSVQHCLKRIAEVNLAYTISQHKKINILREELIDSMYSIALQNPSLAC 60
Query: 61 HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
HY F+HSLS+N++KMA LQ +QEN LLSEK+KIDRLTE+KDE YLLEERQYDDENN DN
Sbjct: 61 HYSNFHHSLSENEKKMADLQSIQENKLLSEKVKIDRLTELKDEIYLLEERQYDDENNEDN 120
Query: 121 IEQRILFNAVSRKFMSL 137
++QR+LF+AVSRKF++L
Sbjct: 121 VDQRVLFDAVSRKFITL 137
>gi|227820884|ref|YP_002824854.1| hypothetical protein NGR_c03030 [Sinorhizobium fredii NGR234]
gi|227339883|gb|ACP24101.1| hypothetical protein NGR_c03030 [Sinorhizobium fredii NGR234]
Length = 137
Score = 63.2 bits (152), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 1 MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
M+SR S+ L +++ Q ++ +AES LA T +R ++ + + D++ S M+ +
Sbjct: 1 MKSR-SKKLKRLVDVQRHLERMAESELAETTRQRGVLSETIDVVVDAMGSAHPMHRVFSG 59
Query: 61 HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
HY L Q DQ + +Q V E +L E+ K DRL E +E + E+R+ DD D
Sbjct: 60 HYAAQLGRLVQKDQMLLGIQQVHEARMLKERAKGDRLQESMEEARMTEDREADDNQVLDL 119
Query: 121 IEQRI 125
I+Q +
Sbjct: 120 IDQHV 124
>gi|222147598|ref|YP_002548555.1| hypothetical protein Avi_0774 [Agrobacterium vitis S4]
gi|221734586|gb|ACM35549.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 137
Score = 60.8 bits (146), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 68/119 (57%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYL 63
+KS+ L +++ Q ++ IAE +L T +R++I E++ +++ S ++ A Y
Sbjct: 5 KKSKKLKRLVAVQRHLEKIAEYDLVETARQRQEIAAGLERVIEALGSMDPVHRLFAQSYA 64
Query: 64 KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIE 122
+ LS +D++MA +Q VQEN +L ++ K +RL E E E+R+ +DE D I+
Sbjct: 65 DRFDRLSGDDRRMADVQRVQENKVLRQRTKAERLQEKMLEARGHEDREAEDETLQDLID 123
>gi|307311583|ref|ZP_07591224.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
gi|306899600|gb|EFN30229.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
Length = 137
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 5 KSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYLK 64
+S L +++ Q ++ +AES +A T +R ++ + + D++ S M+ + HY
Sbjct: 4 RSEKLKRLVAVQRHLERMAESEVAETARQRTELAGTIDVVADAMGSAHPMHRVFSGHYAS 63
Query: 65 FYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQR 124
L Q DQ + +Q V E ++ E+ K DRL E + L E+R+ D + D I+Q
Sbjct: 64 QLGRLVQKDQMLLGIQQVHEARMMKERAKGDRLEEHMKDARLSEDREAADNSILDLIDQH 123
Query: 125 ILFNA 129
+ A
Sbjct: 124 VSGGA 128
>gi|116250509|ref|YP_766347.1| hypothetical protein RL0737 [Rhizobium leguminosarum bv. viciae
3841]
gi|115255157|emb|CAK06231.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 137
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNP---ALAS 60
++S+ L ++++ Q I+ +AE++LA T +R ++N+ + D I + M+P A +
Sbjct: 5 KRSQKLKRLLSVQRHIERMAENDLAETSRQRVEVNV---AMDDVILALGSMDPVHHAFSQ 61
Query: 61 HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
+Y + L+ DQ++ +Q + E L E+ K DRL + E +E R+ DD D
Sbjct: 62 NYADRFGRLTIKDQQLTGMQQIHEMRLTRERAKGDRLEDGMKEALEVERREADDNAVYDV 121
Query: 121 IEQRILFNAVSR 132
I+Q+ A S+
Sbjct: 122 IDQQFATPASSK 133
>gi|15964441|ref|NP_384794.1| hypothetical protein SMc03056 [Sinorhizobium meliloti 1021]
gi|307318938|ref|ZP_07598369.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|15073618|emb|CAC45260.1| Hypothetical protein SMc03056 [Sinorhizobium meliloti 1021]
gi|306895352|gb|EFN26107.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
Length = 137
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 5 KSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYLK 64
+S L +++ Q ++ +AES +A T +R ++ + + D++ S M+ + HY
Sbjct: 4 RSEKLKRLVAVQRHLERMAESEVAETARQRTELAGTIDVVVDAMGSAHPMHRVFSGHYAS 63
Query: 65 FYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQR 124
L Q DQ + +Q V E ++ E+ K DRL E + L E+R+ D + D I+Q
Sbjct: 64 QLGRLVQKDQMLLGIQQVHEARMMKERAKGDRLEEHMKDARLSEDREAADNSILDLIDQH 123
Query: 125 ILFNA 129
+ A
Sbjct: 124 VSGGA 128
>gi|218463240|ref|ZP_03503331.1| hypothetical protein RetlK5_29119 [Rhizobium etli Kim 5]
Length = 137
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 69/131 (52%), Gaps = 6/131 (4%)
Query: 5 KSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNP---ALASH 61
+S+ L ++++ Q I+ +AE++LA T +R ++N + D I + M+P A + +
Sbjct: 6 RSQKLKRLLSVQRHIERMAENDLAETSRQRIEVNA---AMDDVIVALGSMDPVHHAFSQN 62
Query: 62 YLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNI 121
Y + L+ DQ++ +Q + E L E+ K DRL E E +E R+ DD D I
Sbjct: 63 YADRFGRLTIKDQQLTGMQQIHEMRLTRERAKADRLEEGMKEALDVERREADDNAVYDVI 122
Query: 122 EQRILFNAVSR 132
+Q+ A S+
Sbjct: 123 DQQFATPASSK 133
>gi|241203133|ref|YP_002974229.1| hypothetical protein Rleg_0379 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857023|gb|ACS54690.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 137
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNP---ALAS 60
++S+ L ++++ Q I+ +AE++LA T +R ++N+ + D I + M+P A +
Sbjct: 5 KRSQKLKRLLSVQRHIERMAENDLAETSRQRVEVNV---AMDDVILALGSMDPVHHAFSQ 61
Query: 61 HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
+Y + L+ DQ++ + + E L E+ K DRL E E E R+ DD D
Sbjct: 62 NYADRFGRLTIKDQQLTGMHQIHEMRLTRERAKGDRLEEGMQEALEAERREADDNAVYDV 121
Query: 121 IEQRILFNAVSR 132
I+Q+ A S+
Sbjct: 122 IDQQFATPASSK 133
>gi|190890391|ref|YP_001976933.1| hypothetical protein RHECIAT_CH0000766 [Rhizobium etli CIAT 652]
gi|190695670|gb|ACE89755.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 137
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 68/131 (51%), Gaps = 6/131 (4%)
Query: 5 KSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNP---ALASH 61
+S+ L ++++ Q I+ +AE++LA T +R ++N + D I + M+P A + +
Sbjct: 6 RSQKLKRLLSVQRHIERMAENDLAETSRQRIEVNA---AMDDVIVALGSMDPVHHAFSQN 62
Query: 62 YLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNI 121
Y + L+ DQ++ +Q + E L E+ K DRL E E E R+ DD D I
Sbjct: 63 YADRFGRLTIKDQQLTGMQQIHEMRLTRERAKADRLEEGMKEALDAERRESDDNAVYDVI 122
Query: 122 EQRILFNAVSR 132
+Q+ A S+
Sbjct: 123 DQQFATPASSK 133
>gi|222084894|ref|YP_002543423.1| hypothetical protein Arad_0922 [Agrobacterium radiobacter K84]
gi|221722342|gb|ACM25498.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 139
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 65/120 (54%)
Query: 5 KSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYLK 64
+S L +++ Q ++ IAE+ LA T +R +++ E++ +I+S ++ + Y +
Sbjct: 6 RSEKLKRLVAVQRHLERIAENELADTTRQRAEVSDSMERVIGAISSADPVHAVFSMQYAQ 65
Query: 65 FYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQR 124
Y L+ DQ++ +Q + E +L E+ K +RL E + LE R+ DD D I+QR
Sbjct: 66 RYGRLTLRDQQLQGIQELIEMKVLQERTKAERLEEHMKDARELETRETDDNAVYDIIDQR 125
>gi|150395512|ref|YP_001325979.1| hypothetical protein Smed_0285 [Sinorhizobium medicae WSM419]
gi|150027027|gb|ABR59144.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 137
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 5 KSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYLK 64
+S L +++ Q ++ +AES +A T +R ++ + + D++ S M+ + HY
Sbjct: 4 RSEKLKRLVAVQRHLERMAESEVAETARQRVELAGTIDVVVDAMGSAHPMHRVFSGHYSS 63
Query: 65 FYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQR 124
L DQ + +Q V E ++ E+ K DRL E + L E+R+ D + D I+Q
Sbjct: 64 QLGRLVHKDQMLLGIQQVHEARMVKERAKGDRLEENMKDARLQEDRESADNSVLDLIDQY 123
Query: 125 ILFNA-VSRKF 134
+ A SRK
Sbjct: 124 VSLGAPASRKV 134
>gi|325291971|ref|YP_004277835.1| hypothetical protein AGROH133_04006 [Agrobacterium sp. H13-3]
gi|325059824|gb|ADY63515.1| hypothetical protein AGROH133_04006 [Agrobacterium sp. H13-3]
Length = 139
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 61/111 (54%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYL 63
++S L +++T Q ++ +AE LA T R ++ E + ++++S ++ + HY
Sbjct: 5 KRSAKLKRLVTVQRHMEKMAEVELADTTRVRAEVAQSMENVLEAMSSMEPVHQTFSRHYS 64
Query: 64 KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDD 114
Y L D++++ +Q +QEN +L EK K DRL + LE+R+ DD
Sbjct: 65 DRYGRLVVKDRQLSGVQQLQENKVLKEKTKADRLEDRMHLARDLEDREADD 115
>gi|86356339|ref|YP_468231.1| hypothetical protein RHE_CH00688 [Rhizobium etli CFN 42]
gi|86280441|gb|ABC89504.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 137
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 5 KSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNP---ALASH 61
+S+ L ++++ Q I+ +AE++LA T +R ++N + D I + M+P A + +
Sbjct: 6 RSQKLKRLLSVQRHIERMAENDLAETSRQRIEVNA---AMDDVIVALGSMDPVHHAFSQN 62
Query: 62 YLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNI 121
Y + L+ DQ++ +Q + E L E+ K DRL E E R+ DD D I
Sbjct: 63 YADRFGRLTIKDQQLTGMQQIHEMRLSRERAKADRLEEGMKGALDAERREADDNAVYDVI 122
Query: 122 EQRILFNAVSR 132
+Q+ A S+
Sbjct: 123 DQQFATPASSK 133
>gi|209547955|ref|YP_002279872.1| hypothetical protein Rleg2_0347 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533711|gb|ACI53646.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 137
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 5 KSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNP---ALASH 61
+S+ L ++++ Q I+ +AE++LA T +R ++N + D I + M+P A + +
Sbjct: 6 RSQKLKRLLSVQRHIERMAENDLAETSRQRIEVNA---AMDDVILALGSMDPVHHAFSQN 62
Query: 62 YLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNI 121
Y + LS D ++ +Q V E L E+ K DR E E E R+ DD D I
Sbjct: 63 YADRFGRLSIKDLQLTGMQEVHEMRLARERAKGDRFEEGMKEALEAERREADDNAVYDVI 122
Query: 122 EQRILFNAVSR 132
+Q+ A S+
Sbjct: 123 DQQFATPASSK 133
>gi|163758041|ref|ZP_02165129.1| hypothetical protein HPDFL43_00410 [Hoeflea phototrophica DFL-43]
gi|162284330|gb|EDQ34613.1| hypothetical protein HPDFL43_00410 [Hoeflea phototrophica DFL-43]
Length = 128
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 61/110 (55%)
Query: 1 MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
M ++ L +++ Q I+ +AE+ L+ T+ ++ ++ ++ L ++ S ++ A++
Sbjct: 1 MAGSRAEKLARLVRVQRQIERMAETQLSNTLRDQAALDASQDALVKAVGSFDPVHAAMSH 60
Query: 61 HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEER 110
+Y + + +S Q++ ++ VQE +L+EK K DRLT+ EER
Sbjct: 61 NYAQRFQRISAQSQQLEGIKSVQERRVLTEKTKADRLTDQAASAAGNEER 110
>gi|218681682|ref|ZP_03529483.1| hypothetical protein RetlC8_23438 [Rhizobium etli CIAT 894]
Length = 137
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 6/131 (4%)
Query: 5 KSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNP---ALASH 61
+S+ L +++ Q ++ +AE++LA T +R ++N + D I + M+P A + +
Sbjct: 6 RSQKLKRLLLVQRHLERMAENDLAETSRQRVEVNA---AMDDVILALGSMDPVHHAFSQN 62
Query: 62 YLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNI 121
Y + L+ DQ++ +Q + E L E+ K DR E ++ E R+ DD D I
Sbjct: 63 YADRFGRLTIKDQQLTGMQQIHEMRLARERAKGDRFEENMNDALEAERREADDNAVYDVI 122
Query: 122 EQRILFNAVSR 132
+Q+ A S+
Sbjct: 123 DQQFATPASSK 133
>gi|159184374|ref|NP_353609.2| hypothetical protein Atu0583 [Agrobacterium tumefaciens str. C58]
gi|159139687|gb|AAK86394.2| hypothetical protein Atu0583 [Agrobacterium tumefaciens str. C58]
Length = 139
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 57/111 (51%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYL 63
++S L +++T Q ++ +AE LA T R ++ E ++++S ++ + HY
Sbjct: 5 KRSEKLKRLVTVQRHMEKMAEVELADTTRVRSEVAQSMESTFEAMSSMEPVHQTFSKHYS 64
Query: 64 KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDD 114
Y L D+++ +Q QEN +L EK K DRL + LE+R+ D
Sbjct: 65 DRYSRLVVQDRQLEGVQQFQENKVLKEKTKADRLEDRMHIARDLEDREAGD 115
>gi|218516757|ref|ZP_03513597.1| hypothetical protein Retl8_25668 [Rhizobium etli 8C-3]
Length = 112
Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Query: 44 LKDSINSTALMNP---ALASHYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEM 100
+ D I + M+P A + +Y + L+ DQ++ +Q + E L E+ K DRL E
Sbjct: 17 MDDVIVALGSMDPVHHAFSQNYADRFGRLTIKDQQLTGMQQIHEMRLTRERAKADRLEEG 76
Query: 101 KDETYLLEERQYDDENNNDNIEQRILFNAVSR 132
E E R+ DD D I+Q+ A S+
Sbjct: 77 MKEALDAERRETDDNAVYDVIDQQFATPASSK 108
>gi|293332427|ref|NP_001169966.1| hypothetical protein LOC100383866 [Zea mays]
gi|224032621|gb|ACN35386.1| unknown [Zea mays]
Length = 582
Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 29 YTISERKKINILREKLKDSINSTALMNPALASHYLKFYHS-----LSQNDQKMASLQLVQ 83
Y+++ K +LR+ +K S+ ST +PA + ++K + + L + + L+
Sbjct: 142 YSVALSKGQIVLRDHVKQSVPST--WDPAALARFIKKFGTHIVVGLKMGGKDVIYLKQQH 199
Query: 84 ENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNI 121
+TL + ++ RL EM D +L QYD NN ++
Sbjct: 200 SSTLQAVDVQ-KRLKEMSDSRFLDANVQYDMSRNNQDL 236
>gi|124505769|ref|XP_001350998.1| pfAARP2 protein [Plasmodium falciparum 3D7]
gi|23510641|emb|CAD49026.1| pfAARP2 protein [Plasmodium falciparum 3D7]
Length = 1434
Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 38 NILREKLK-DSINSTALMNPALASHYLKFYHSLSQN--DQKMASLQLVQENTLLSEKIKI 94
NI +K K D IN AL NP LA+ + + H++ +N DQK A QL L EK+KI
Sbjct: 1355 NINNKKTKTDQINFNALPNPKLAAKWYQMLHTIKKNILDQKKAKSQLSYHKK-LKEKLKI 1413
>gi|157816797|gb|ABV82390.1| RE15683p [Drosophila melanogaster]
Length = 1262
Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 21 SIAESNLAYTISERKKINI------------LREKLKDSINSTALMNPALASHYLKFYHS 68
++A SN + T RK+ I ++EK+ + N+T+L PA S H
Sbjct: 483 TVAASNASGTEYIRKRAEIETAHITATDPLNIKEKVDKNCNATSLAQPAKGSGEPMVQHG 542
Query: 69 LSQNDQKMASLQLVQENTLLSEKIKI 94
+ N+Q + S L Q++TL + ++ I
Sbjct: 543 NAANNQNITSKGLQQQSTLTNSQVAI 568
>gi|281359549|ref|NP_726576.2| asator, isoform E [Drosophila melanogaster]
gi|272482438|gb|AAN06495.2| asator, isoform E [Drosophila melanogaster]
Length = 1262
Score = 34.3 bits (77), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 21 SIAESNLAYTISERKKINI------------LREKLKDSINSTALMNPALASHYLKFYHS 68
++A SN + T RK+ I ++EK+ + N+T+L PA S H
Sbjct: 483 TVAASNASGTEYIRKRAEIETAHITATDPLNIKEKVDKNCNATSLAQPAKGSGEPMVQHG 542
Query: 69 LSQNDQKMASLQLVQENTLLSEKIKI 94
+ N+Q + S L Q++TL + ++ I
Sbjct: 543 NAANNQNITSKGLQQQSTLTNSQVAI 568
>gi|295110874|emb|CBL27624.1| metal dependent phosphohydrolase [Synergistetes bacterium SGP1]
Length = 509
Score = 33.9 bits (76), Expect = 6.7, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 75 KMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQRILFNAVSRKF 134
K +L ++QE T +E++K DRLTE +DE L + E N D E+R V RK
Sbjct: 33 KNQTLLMLQEATDAAERLKQDRLTEARDEVSRLRQ-----EANRDAKERRAELQRVERKL 87
>gi|281359551|ref|NP_726577.2| asator, isoform F [Drosophila melanogaster]
gi|272482439|gb|AAN06496.2| asator, isoform F [Drosophila melanogaster]
Length = 811
Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 21 SIAESNLAYTISERKKINI------------LREKLKDSINSTALMNPALASHYLKFYHS 68
++A SN + T RK+ I ++EK+ + N+T+L PA S H
Sbjct: 327 TVAASNASGTEYIRKRAEIETAHITATDPLNIKEKVDKNCNATSLAQPAKGSGEPMVQHG 386
Query: 69 LSQNDQKMASLQLVQENTLLSEKIKI 94
+ N+Q + S L Q++TL + ++ I
Sbjct: 387 NAANNQNITSKGLQQQSTLTNSQVAI 412
Searching..................................................done
Results from round 2
>gi|315122293|ref|YP_004062782.1| hypothetical protein CKC_02725 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495695|gb|ADR52294.1| hypothetical protein CKC_02725 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 137
Score = 156 bits (395), Expect = 8e-37, Method: Composition-based stats.
Identities = 94/137 (68%), Positives = 117/137 (85%)
Query: 1 MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
MR R S+ L+K+++ Q C+K IAE NLAYTIS+ KKINILRE+L DS+ S AL NP+LA
Sbjct: 1 MRCRDSKTLHKLLSVQHCLKRIAEVNLAYTISQHKKINILREELIDSMYSIALQNPSLAC 60
Query: 61 HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
HY F+HSLS+N++KMA LQ +QEN LLSEK+KIDRLTE+KDE YLLEERQYDDENN DN
Sbjct: 61 HYSNFHHSLSENEKKMADLQSIQENKLLSEKVKIDRLTELKDEIYLLEERQYDDENNEDN 120
Query: 121 IEQRILFNAVSRKFMSL 137
++QR+LF+AVSRKF++L
Sbjct: 121 VDQRVLFDAVSRKFITL 137
>gi|116250509|ref|YP_766347.1| hypothetical protein RL0737 [Rhizobium leguminosarum bv. viciae
3841]
gi|115255157|emb|CAK06231.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
3841]
Length = 137
Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 71/129 (55%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYL 63
++S+ L ++++ Q I+ +AE++LA T +R ++N+ + + ++ S ++ A + +Y
Sbjct: 5 KRSQKLKRLLSVQRHIERMAENDLAETSRQRVEVNVAMDDVILALGSMDPVHHAFSQNYA 64
Query: 64 KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQ 123
+ L+ DQ++ +Q + E L E+ K DRL + E +E R+ DD D I+Q
Sbjct: 65 DRFGRLTIKDQQLTGMQQIHEMRLTRERAKGDRLEDGMKEALEVERREADDNAVYDVIDQ 124
Query: 124 RILFNAVSR 132
+ A S+
Sbjct: 125 QFATPASSK 133
>gi|254780510|ref|YP_003064923.1| hypothetical protein CLIBASIA_01985 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040187|gb|ACT56983.1| hypothetical protein CLIBASIA_01985 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 137
Score = 152 bits (383), Expect = 2e-35, Method: Composition-based stats.
Identities = 137/137 (100%), Positives = 137/137 (100%)
Query: 1 MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS
Sbjct: 1 MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
Query: 61 HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN
Sbjct: 61 HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDN 120
Query: 121 IEQRILFNAVSRKFMSL 137
IEQRILFNAVSRKFMSL
Sbjct: 121 IEQRILFNAVSRKFMSL 137
>gi|209547955|ref|YP_002279872.1| hypothetical protein Rleg2_0347 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533711|gb|ACI53646.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 137
Score = 150 bits (380), Expect = 4e-35, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 66/128 (51%)
Query: 5 KSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYLK 64
+S+ L ++++ Q I+ +AE++LA T +R ++N + + ++ S ++ A + +Y
Sbjct: 6 RSQKLKRLLSVQRHIERMAENDLAETSRQRIEVNAAMDDVILALGSMDPVHHAFSQNYAD 65
Query: 65 FYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQR 124
+ LS D ++ +Q V E L E+ K DR E E E R+ DD D I+Q+
Sbjct: 66 RFGRLSIKDLQLTGMQEVHEMRLARERAKGDRFEEGMKEALEAERREADDNAVYDVIDQQ 125
Query: 125 ILFNAVSR 132
A S+
Sbjct: 126 FATPASSK 133
>gi|218463240|ref|ZP_03503331.1| hypothetical protein RetlK5_29119 [Rhizobium etli Kim 5]
Length = 137
Score = 150 bits (378), Expect = 7e-35, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 69/129 (53%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYL 63
+S+ L ++++ Q I+ +AE++LA T +R ++N + + ++ S ++ A + +Y
Sbjct: 5 SRSQKLKRLLSVQRHIERMAENDLAETSRQRIEVNAAMDDVIVALGSMDPVHHAFSQNYA 64
Query: 64 KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQ 123
+ L+ DQ++ +Q + E L E+ K DRL E E +E R+ DD D I+Q
Sbjct: 65 DRFGRLTIKDQQLTGMQQIHEMRLTRERAKADRLEEGMKEALDVERREADDNAVYDVIDQ 124
Query: 124 RILFNAVSR 132
+ A S+
Sbjct: 125 QFATPASSK 133
>gi|218681682|ref|ZP_03529483.1| hypothetical protein RetlC8_23438 [Rhizobium etli CIAT 894]
Length = 137
Score = 150 bits (378), Expect = 8e-35, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 67/128 (52%)
Query: 5 KSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYLK 64
+S+ L +++ Q ++ +AE++LA T +R ++N + + ++ S ++ A + +Y
Sbjct: 6 RSQKLKRLLLVQRHLERMAENDLAETSRQRVEVNAAMDDVILALGSMDPVHHAFSQNYAD 65
Query: 65 FYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQR 124
+ L+ DQ++ +Q + E L E+ K DR E ++ E R+ DD D I+Q+
Sbjct: 66 RFGRLTIKDQQLTGMQQIHEMRLARERAKGDRFEENMNDALEAERREADDNAVYDVIDQQ 125
Query: 125 ILFNAVSR 132
A S+
Sbjct: 126 FATPASSK 133
>gi|241203133|ref|YP_002974229.1| hypothetical protein Rleg_0379 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240857023|gb|ACS54690.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 137
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 69/129 (53%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYL 63
++S+ L ++++ Q I+ +AE++LA T +R ++N+ + + ++ S ++ A + +Y
Sbjct: 5 KRSQKLKRLLSVQRHIERMAENDLAETSRQRVEVNVAMDDVILALGSMDPVHHAFSQNYA 64
Query: 64 KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQ 123
+ L+ DQ++ + + E L E+ K DRL E E E R+ DD D I+Q
Sbjct: 65 DRFGRLTIKDQQLTGMHQIHEMRLTRERAKGDRLEEGMQEALEAERREADDNAVYDVIDQ 124
Query: 124 RILFNAVSR 132
+ A S+
Sbjct: 125 QFATPASSK 133
>gi|86356339|ref|YP_468231.1| hypothetical protein RHE_CH00688 [Rhizobium etli CFN 42]
gi|86280441|gb|ABC89504.1| hypothetical conserved protein [Rhizobium etli CFN 42]
Length = 137
Score = 149 bits (376), Expect = 1e-34, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 67/129 (51%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYL 63
+S+ L ++++ Q I+ +AE++LA T +R ++N + + ++ S ++ A + +Y
Sbjct: 5 SRSQKLKRLLSVQRHIERMAENDLAETSRQRIEVNAAMDDVIVALGSMDPVHHAFSQNYA 64
Query: 64 KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQ 123
+ L+ DQ++ +Q + E L E+ K DRL E E R+ DD D I+Q
Sbjct: 65 DRFGRLTIKDQQLTGMQQIHEMRLSRERAKADRLEEGMKGALDAERREADDNAVYDVIDQ 124
Query: 124 RILFNAVSR 132
+ A S+
Sbjct: 125 QFATPASSK 133
>gi|190890391|ref|YP_001976933.1| hypothetical protein RHECIAT_CH0000766 [Rhizobium etli CIAT 652]
gi|190695670|gb|ACE89755.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
Length = 137
Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 36/129 (27%), Positives = 68/129 (52%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYL 63
+S+ L ++++ Q I+ +AE++LA T +R ++N + + ++ S ++ A + +Y
Sbjct: 5 SRSQKLKRLLSVQRHIERMAENDLAETSRQRIEVNAAMDDVIVALGSMDPVHHAFSQNYA 64
Query: 64 KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQ 123
+ L+ DQ++ +Q + E L E+ K DRL E E E R+ DD D I+Q
Sbjct: 65 DRFGRLTIKDQQLTGMQQIHEMRLTRERAKADRLEEGMKEALDAERRESDDNAVYDVIDQ 124
Query: 124 RILFNAVSR 132
+ A S+
Sbjct: 125 QFATPASSK 133
>gi|15964441|ref|NP_384794.1| hypothetical protein SMc03056 [Sinorhizobium meliloti 1021]
gi|307318938|ref|ZP_07598369.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
gi|15073618|emb|CAC45260.1| Hypothetical protein SMc03056 [Sinorhizobium meliloti 1021]
gi|306895352|gb|EFN26107.1| conserved hypothetical protein [Sinorhizobium meliloti AK83]
Length = 137
Score = 149 bits (375), Expect = 2e-34, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 5 KSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYLK 64
+S L +++ Q ++ +AES +A T +R ++ + + D++ S M+ + HY
Sbjct: 4 RSEKLKRLVAVQRHLERMAESEVAETARQRTELAGTIDVVVDAMGSAHPMHRVFSGHYAS 63
Query: 65 FYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQR 124
L Q DQ + +Q V E ++ E+ K DRL E + L E+R+ D + D I+Q
Sbjct: 64 QLGRLVQKDQMLLGIQQVHEARMMKERAKGDRLEEHMKDARLSEDREAADNSILDLIDQH 123
Query: 125 ILFNA 129
+ A
Sbjct: 124 VSGGA 128
>gi|307311583|ref|ZP_07591224.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
gi|306899600|gb|EFN30229.1| conserved hypothetical protein [Sinorhizobium meliloti BL225C]
Length = 137
Score = 147 bits (371), Expect = 4e-34, Method: Composition-based stats.
Identities = 35/125 (28%), Positives = 63/125 (50%)
Query: 5 KSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYLK 64
+S L +++ Q ++ +AES +A T +R ++ + + D++ S M+ + HY
Sbjct: 4 RSEKLKRLVAVQRHLERMAESEVAETARQRTELAGTIDVVADAMGSAHPMHRVFSGHYAS 63
Query: 65 FYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQR 124
L Q DQ + +Q V E ++ E+ K DRL E + L E+R+ D + D I+Q
Sbjct: 64 QLGRLVQKDQMLLGIQQVHEARMMKERAKGDRLEEHMKDARLSEDREAADNSILDLIDQH 123
Query: 125 ILFNA 129
+ A
Sbjct: 124 VSGGA 128
>gi|150395512|ref|YP_001325979.1| hypothetical protein Smed_0285 [Sinorhizobium medicae WSM419]
gi|150027027|gb|ABR59144.1| conserved hypothetical protein [Sinorhizobium medicae WSM419]
Length = 137
Score = 145 bits (366), Expect = 2e-33, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 65/131 (49%), Gaps = 1/131 (0%)
Query: 5 KSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYLK 64
+S L +++ Q ++ +AES +A T +R ++ + + D++ S M+ + HY
Sbjct: 4 RSEKLKRLVAVQRHLERMAESEVAETARQRVELAGTIDVVVDAMGSAHPMHRVFSGHYSS 63
Query: 65 FYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQR 124
L DQ + +Q V E ++ E+ K DRL E + L E+R+ D + D I+Q
Sbjct: 64 QLGRLVHKDQMLLGIQQVHEARMVKERAKGDRLEENMKDARLQEDRESADNSVLDLIDQY 123
Query: 125 ILFNA-VSRKF 134
+ A SRK
Sbjct: 124 VSLGAPASRKV 134
>gi|227820884|ref|YP_002824854.1| hypothetical protein NGR_c03030 [Sinorhizobium fredii NGR234]
gi|227339883|gb|ACP24101.1| hypothetical protein NGR_c03030 [Sinorhizobium fredii NGR234]
Length = 137
Score = 143 bits (361), Expect = 7e-33, Method: Composition-based stats.
Identities = 38/126 (30%), Positives = 65/126 (51%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYL 63
+S+ L +++ Q ++ +AES LA T +R ++ + + D++ S M+ + HY
Sbjct: 3 SRSKKLKRLVDVQRHLERMAESELAETTRQRGVLSETIDVVVDAMGSAHPMHRVFSGHYA 62
Query: 64 KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQ 123
L Q DQ + +Q V E +L E+ K DRL E +E + E+R+ DD D I+Q
Sbjct: 63 AQLGRLVQKDQMLLGIQQVHEARMLKERAKGDRLQESMEEARMTEDREADDNQVLDLIDQ 122
Query: 124 RILFNA 129
+ A
Sbjct: 123 HVAGYA 128
>gi|222084894|ref|YP_002543423.1| hypothetical protein Arad_0922 [Agrobacterium radiobacter K84]
gi|221722342|gb|ACM25498.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 139
Score = 134 bits (338), Expect = 3e-30, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 68/131 (51%), Gaps = 2/131 (1%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYL 63
+S L +++ Q ++ IAE+ LA T +R +++ E++ +I+S ++ + Y
Sbjct: 5 SRSEKLKRLVAVQRHLERIAENELADTTRQRAEVSDSMERVIGAISSADPVHAVFSMQYA 64
Query: 64 KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQ 123
+ Y L+ DQ++ +Q + E +L E+ K +RL E + LE R+ DD D I+Q
Sbjct: 65 QRYGRLTLRDQQLQGIQELIEMKVLQERTKAERLEEHMKDARELETRETDDNAVYDIIDQ 124
Query: 124 RIL--FNAVSR 132
R A S+
Sbjct: 125 RFADITPASSK 135
>gi|325291971|ref|YP_004277835.1| hypothetical protein AGROH133_04006 [Agrobacterium sp. H13-3]
gi|325059824|gb|ADY63515.1| hypothetical protein AGROH133_04006 [Agrobacterium sp. H13-3]
Length = 139
Score = 133 bits (335), Expect = 6e-30, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 64/119 (53%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYL 63
++S L +++T Q ++ +AE LA T R ++ E + ++++S ++ + HY
Sbjct: 5 KRSAKLKRLVTVQRHMEKMAEVELADTTRVRAEVAQSMENVLEAMSSMEPVHQTFSRHYS 64
Query: 64 KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIE 122
Y L D++++ +Q +QEN +L EK K DRL + LE+R+ DD D +E
Sbjct: 65 DRYGRLVVKDRQLSGVQQLQENKVLKEKTKADRLEDRMHLARDLEDREADDNAIYDLLE 123
>gi|159184374|ref|NP_353609.2| hypothetical protein Atu0583 [Agrobacterium tumefaciens str. C58]
gi|159139687|gb|AAK86394.2| hypothetical protein Atu0583 [Agrobacterium tumefaciens str. C58]
Length = 139
Score = 133 bits (334), Expect = 9e-30, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 60/119 (50%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYL 63
++S L +++T Q ++ +AE LA T R ++ E ++++S ++ + HY
Sbjct: 5 KRSEKLKRLVTVQRHMEKMAEVELADTTRVRSEVAQSMESTFEAMSSMEPVHQTFSKHYS 64
Query: 64 KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIE 122
Y L D+++ +Q QEN +L EK K DRL + LE+R+ D D +E
Sbjct: 65 DRYSRLVVQDRQLEGVQQFQENKVLKEKTKADRLEDRMHIARDLEDREAGDNAIYDLLE 123
>gi|222147598|ref|YP_002548555.1| hypothetical protein Avi_0774 [Agrobacterium vitis S4]
gi|221734586|gb|ACM35549.1| conserved hypothetical protein [Agrobacterium vitis S4]
Length = 137
Score = 132 bits (332), Expect = 2e-29, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 71/129 (55%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYL 63
+KS+ L +++ Q ++ IAE +L T +R++I E++ +++ S ++ A Y
Sbjct: 5 KKSKKLKRLVAVQRHLEKIAEYDLVETARQRQEIAAGLERVIEALGSMDPVHRLFAQSYA 64
Query: 64 KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQ 123
+ LS +D++MA +Q VQEN +L ++ K +RL E E E+R+ +DE D I+
Sbjct: 65 DRFDRLSGDDRRMADVQRVQENKVLRQRTKAERLQEKMLEARGHEDREAEDETLQDLIDL 124
Query: 124 RILFNAVSR 132
A S+
Sbjct: 125 TFATPASSK 133
>gi|218516757|ref|ZP_03513597.1| hypothetical protein Retl8_25668 [Rhizobium etli 8C-3]
Length = 112
Score = 125 bits (314), Expect = 2e-27, Method: Composition-based stats.
Identities = 26/98 (26%), Positives = 47/98 (47%)
Query: 35 KKINILREKLKDSINSTALMNPALASHYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKI 94
++N + + ++ S ++ A + +Y + L+ DQ++ +Q + E L E+ K
Sbjct: 11 IEVNAAMDDVIVALGSMDPVHHAFSQNYADRFGRLTIKDQQLTGMQQIHEMRLTRERAKA 70
Query: 95 DRLTEMKDETYLLEERQYDDENNNDNIEQRILFNAVSR 132
DRL E E E R+ DD D I+Q+ A S+
Sbjct: 71 DRLEEGMKEALDAERRETDDNAVYDVIDQQFATPASSK 108
>gi|163758041|ref|ZP_02165129.1| hypothetical protein HPDFL43_00410 [Hoeflea phototrophica DFL-43]
gi|162284330|gb|EDQ34613.1| hypothetical protein HPDFL43_00410 [Hoeflea phototrophica DFL-43]
Length = 128
Score = 102 bits (253), Expect = 2e-20, Method: Composition-based stats.
Identities = 28/112 (25%), Positives = 61/112 (54%)
Query: 1 MRSRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALAS 60
M ++ L +++ Q I+ +AE+ L+ T+ ++ ++ ++ L ++ S ++ A++
Sbjct: 1 MAGSRAEKLARLVRVQRQIERMAETQLSNTLRDQAALDASQDALVKAVGSFDPVHAAMSH 60
Query: 61 HYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQY 112
+Y + + +S Q++ ++ VQE +L+EK K DRLT+ EER
Sbjct: 61 NYAQRFQRISAQSQQLEGIKSVQERRVLTEKTKADRLTDQAASAAGNEERAA 112
>gi|218509486|ref|ZP_03507364.1| hypothetical protein RetlB5_19239 [Rhizobium etli Brasil 5]
Length = 70
Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 67 HSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQRIL 126
L+ DQ++ +Q + E L E+ + DRL E E E R+ DD D I+Q+
Sbjct: 1 GRLTIKDQQLTGMQQIHEMRLTRERARADRLEEGMKEALDAERREADDNAVYDVIDQQFA 60
Query: 127 FNAVSR 132
A S+
Sbjct: 61 TPASSK 66
>gi|300024563|ref|YP_003757174.1| hypothetical protein Hden_3058 [Hyphomicrobium denitrificans ATCC
51888]
gi|299526384|gb|ADJ24853.1| hypothetical protein Hden_3058 [Hyphomicrobium denitrificans ATCC
51888]
Length = 138
Score = 41.6 bits (96), Expect = 0.035, Method: Composition-based stats.
Identities = 14/130 (10%), Positives = 44/130 (33%)
Query: 3 SRKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHY 62
+ +++ L +I ++++ ++ E + ++ + S+ S + +N +
Sbjct: 2 ASQTKKLGRIADVFHDLETVERVRVSDLTQEIASLRAAQDDIFRSLESPSPVNGLFTALL 61
Query: 63 LKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIE 122
L + Q+++ + + + E E R+ + +E
Sbjct: 62 SSRVGRLERRIQQLSREHEIALKRYAEAAARGRSADRLLAEAKGEEARKREQAELEALLE 121
Query: 123 QRILFNAVSR 132
+ A R
Sbjct: 122 FQEAVGAQGR 131
>gi|169861600|ref|XP_001837434.1| Usp36 protein [Coprinopsis cinerea okayama7#130]
gi|116501455|gb|EAU84350.1| Usp36 protein [Coprinopsis cinerea okayama7#130]
Length = 637
Score = 37.0 bits (84), Expect = 0.83, Method: Composition-based stats.
Identities = 17/87 (19%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Query: 43 KLKDSINSTALMN-PALASHYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMK 101
++ D + S +N P L+ + Q + Q N +L E+ RL+E
Sbjct: 394 EMNDEMVS--PINGPPLSKKSAYVLFYMRAKGQGLEGAVKSQINGVLKEQRSKPRLSESM 451
Query: 102 DETYLLEERQYDDENNNDNIEQRILFN 128
++R DDE+ + +++ +
Sbjct: 452 K-APKPKDRDADDEDKGEKLDRPFIGP 477
>gi|301605337|ref|XP_002932289.1| PREDICTED: ras and EF-hand domain-containing protein [Xenopus
(Silurana) tropicalis]
Length = 653
Score = 37.0 bits (84), Expect = 0.92, Method: Composition-based stats.
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 9/115 (7%)
Query: 17 CCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALA---SHYLKFYHSLSQND 73
+ + E+ ++R I L LK + +TA + H+L Q++
Sbjct: 125 QQYERLVENVFYDFRAQRLNIEKLESVLKRTEGATAKQIAEMEEDLQHHLTKMERQIQDE 184
Query: 74 QKM------ASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIE 122
+ + LQ E LS + KIDR+T+ KDE +E ++ + N +
Sbjct: 185 ELLRLNTAIQELQRKHEMETLSLQTKIDRMTKHKDERLAMESKEESAKLKNQIFD 239
>gi|218662874|ref|ZP_03518804.1| hypothetical protein RetlI_27589 [Rhizobium etli IE4771]
Length = 36
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 21/32 (65%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERK 35
+S+ L ++++ Q I+ +AE++LA T +R
Sbjct: 5 SRSQKLKRLLSVQRHIERMAENDLAETSRQRI 36
>gi|198427589|ref|XP_002124628.1| PREDICTED: similar to soluble guanylyl cyclase beta-3 subunit
[Ciona intestinalis]
Length = 676
Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 66 YHSLSQNDQKMASLQLVQENTLL--SEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQ 123
YH LS D + Q E L E+ K RL E E+ E+R+ DD I +
Sbjct: 350 YHDLS-RDMVLHGPQQTSEYRLALDMEQTKATRLEE-MVESLSSEQRKTDD-LLYSMIPR 406
Query: 124 RIL 126
+
Sbjct: 407 EVA 409
>gi|90425547|ref|YP_533917.1| cyclic beta-1,2-glucan ABC transporter [Rhodopseudomonas palustris
BisB18]
gi|122995330|sp|Q20Z38|NDVA_RHOPB RecName: Full=Beta-(1-->2)glucan export ATP-binding/permease
protein NdvA
gi|90107561|gb|ABD89598.1| ABC transporter related [Rhodopseudomonas palustris BisB18]
Length = 604
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 44/122 (36%), Gaps = 9/122 (7%)
Query: 20 KSIAESNLAYTISERKKINILREKLKDSINSTALMNPALA-SHYLKFYHSLSQNDQKMAS 78
K A ++L++T + I ++ + AL++ A + L D +A
Sbjct: 357 KRPAVADLSFTARPGETIALVGATGAGKSTAIALLHRAFDPQSGVIRIDGLDVRDLTLAG 416
Query: 79 LQL----VQENTLLSEKIKIDRLTEMKDETYLLEERQYDDEN-NNDNI---EQRILFNAV 130
L+ V + LL + D L K + E R D I EQ+ NA
Sbjct: 417 LRRNIGVVFQEALLFNRSIADNLRVGKPDATEEEMRTAASRAQALDFIERSEQKFDTNAG 476
Query: 131 SR 132
R
Sbjct: 477 ER 478
>gi|288574036|ref|ZP_06392393.1| hypothetical protein Dpep_1308 [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288569777|gb|EFC91334.1| hypothetical protein Dpep_1308 [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 616
Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats.
Identities = 21/109 (19%), Positives = 46/109 (42%), Gaps = 13/109 (11%)
Query: 26 NLAYTISERKKINILREKLKDSINSTALMNPALASHYLKFYHSL---SQNDQKMASLQLV 82
A + + +N + L ++I + + LA Y +L D+++ ++++
Sbjct: 37 EHADALRVFQFLNYIDFGLSEAIQTEDAL--VLARQYEILAGNLDLAVIKDEQL--IEVI 92
Query: 83 QENTLLSEKIKIDRLTEMKDETYLLEERQ------YDDENNNDNIEQRI 125
+ L ++ K DRL E + + R+ E+ D+I Q+I
Sbjct: 93 EALGKLVDRTKTDRLDEQVKAAFSAKTRERIYGNLSGSEDILDSIRQQI 141
>gi|226288626|gb|EEH44138.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 662
Score = 34.7 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 16/111 (14%)
Query: 24 ESNLAYTISERKKINILREKLKD--SINSTALMNPALASHYLKFYHSLSQNDQKMASLQL 81
E L +K +N R +LK ++ +NP+LA + A +Q
Sbjct: 271 EVLLIENRQLQKALNQERRRLKRGRAMGLLDPLNPSLAQFFSP------------AKVQS 318
Query: 82 VQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQRILFNAVSR 132
++EN SE K D + + E L+ ++ D I+QR+ A +
Sbjct: 319 IRENLAASEVAKKD--EQARKEDAKLQRTILKEQKEADIIQQRMEREAARQ 367
>gi|158422280|ref|YP_001523572.1| hypothetical protein AZC_0656 [Azorhizobium caulinodans ORS 571]
gi|158329169|dbj|BAF86654.1| hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 143
Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 19/110 (17%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYL 63
++ R +I+ Q + AE +A + + LR +L +++N P L
Sbjct: 3 QRLRKAGRIVAVQEQMHRQAEWRMADISRAKADLERLRSELIETLNE-DTFGPLLVEVVA 61
Query: 64 KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYD 113
+ + + ++ Q+ QE + E +++ R M + +R +
Sbjct: 62 RRLKATAAEADRLTQEQMRQEAKVREEALRLKRAERMHENVSRQYDRHQE 111
>gi|237841641|ref|XP_002370118.1| SPRY domain-containing protein [Toxoplasma gondii ME49]
gi|95007238|emb|CAJ20459.1| spry domain containing protein, putative [Toxoplasma gondii RH]
gi|211967782|gb|EEB02978.1| SPRY domain-containing protein [Toxoplasma gondii ME49]
gi|221482580|gb|EEE20918.1| SPRY domain-containing protein, putative [Toxoplasma gondii GT1]
gi|221503224|gb|EEE28930.1| SPRY domain-containing protein, putative [Toxoplasma gondii VEG]
Length = 740
Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 19/125 (15%), Positives = 48/125 (38%), Gaps = 25/125 (20%)
Query: 19 IKSIAESNLAYTISERKKINILREKLKDSINSTALM---------NPALASHYLKFYHSL 69
+K++ + +L +R K ++ R+ ++ S A + + A + F +L
Sbjct: 242 LKAMLQCDLVEE-RQRIKADLERDARLAALVSPASLTEVVRSYLLHAAFSRTLAAFERAL 300
Query: 70 SQND--------------QKMASLQLVQENTLLSEKIKIDR-LTEMKDETYLLEERQYDD 114
++ D ++ + + E + E+ +R + E E +EER ++
Sbjct: 301 TKRDKGETRKNDEENGEGRETEAGERALEERAVEERAVEERAVEERAVEERAVEERAVEE 360
Query: 115 ENNND 119
+
Sbjct: 361 RAVEE 365
>gi|226286805|gb|EEH42318.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 533
Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 50/129 (38%), Gaps = 16/129 (12%)
Query: 6 SRALYKIITAQCCIKSIAESNLAYTISERKKINILRE--KLKDSINSTALMNPALASHYL 63
S L ++I A + E L +K +N R K ++ +NP+LA +
Sbjct: 381 SNDLNRVIRAGENLALDKEVLLIENRQLQKALNQERRCRKRGRAMGLLDPLNPSLAQFFS 440
Query: 64 KFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQ 123
+A +Q ++EN SE K D + E L+ ++ D I+Q
Sbjct: 441 ------------LAKVQSIRENLAASEVAKKD--EQACKEDAKLQRTILKEQKEADIIQQ 486
Query: 124 RILFNAVSR 132
R+ A +
Sbjct: 487 RMEREAARQ 495
>gi|46124891|ref|XP_386999.1| hypothetical protein FG06823.1 [Gibberella zeae PH-1]
Length = 816
Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 19/112 (16%), Positives = 47/112 (41%), Gaps = 10/112 (8%)
Query: 12 IITAQCCIKSIAESNLAYTISERKKINILREKLKDSINSTALMNPALASHYLKFYHSLSQ 71
++ Q ++S + + K LR+ L++ + A++ +H F +
Sbjct: 392 LVELQSLMESADMPDAHRNSWDNKDTAQLRQLLREKNDKIAMLTAEFDAHRADF--RSTI 449
Query: 72 NDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNNDNIEQ 123
+ ++AS + +E++ R+ E+ + LE R D ++ ++Q
Sbjct: 450 DTLELASTE--------TERVYEKRIEELMADVRELESRNLDVDSVATQLKQ 493
>gi|281200428|gb|EFA74648.1| hypothetical protein PPL_11617 [Polysphondylium pallidum PN500]
Length = 664
Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 1/55 (1%)
Query: 15 AQCCIKSIAESNLAYTIS-ERKKINILREKLKDSINSTALMNPALASHYLKFYHS 68
C + + S +R IN E +K+ +S ++ + YL +H
Sbjct: 49 VNRCFEGDLVIDFGEVSSEQRISINRTIESIKEVADSFDRVDSVKSRSYLDDFHR 103
>gi|124808566|ref|XP_001348348.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
gi|74864292|sp|Q8ILR9|YPF17_PLAF7 RecName: Full=Protein PF14_0175
gi|23497240|gb|AAN36787.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum
3D7]
Length = 4662
Score = 33.9 bits (76), Expect = 6.6, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Query: 39 ILREKLKDSINSTALMNPALASHYLKFYHSLSQNDQKMASLQL--VQENTLLSEKIKIDR 96
L+ + +I ++H + L Q + LQ +Q+ L E+++ +R
Sbjct: 4180 GLKNTMTKNIIQRVPQKKGYSTHDMNQQERLQQERLQQERLQQERLQQERLQQERLQQER 4239
Query: 97 L-TEMKDETYLLEERQYDDENNNDNIEQR 124
L E + L +ER + + ++Q+
Sbjct: 4240 LQQERLQQERLQQERLQQERLQQERLQQK 4268
>gi|46120398|ref|XP_385022.1| hypothetical protein FG04846.1 [Gibberella zeae PH-1]
Length = 1685
Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 68 SLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEERQYDDENNND 119
SL D++ Q V E ++ K D+ TE +T + +R+ DD+ ND
Sbjct: 782 SLPIPDRQPLVQQGVTEQRGADDETKDDQKTEKPMDTSSVTKREADDKTEND 833
>gi|304404133|ref|ZP_07385795.1| Fibronectin-binding A domain protein [Paenibacillus curdlanolyticus
YK9]
gi|304347111|gb|EFM12943.1| Fibronectin-binding A domain protein [Paenibacillus curdlanolyticus
YK9]
Length = 584
Score = 33.9 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 50 STALMNPALASHYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDRLTEMKDETYLLEE 109
S ++ L ++Y + + Q+ A L +N + K K+D+L E ++ ++
Sbjct: 278 SFDSISRCLEAYYGEKAGRDAVK-QRAADLLKFVQNEIAKNKTKLDKLHETVEDAKGADQ 336
>gi|320164688|gb|EFW41587.1| rabgap1 protein [Capsaspora owczarzaki ATCC 30864]
Length = 933
Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 17/136 (12%), Positives = 50/136 (36%), Gaps = 11/136 (8%)
Query: 4 RKSRALYKIITAQCCIKSIAESNLAYTISERKKINILREKLKD-------SINSTALMNP 56
R ++ +++ Q +++ + ++ R ++ +++ D +++ ++
Sbjct: 635 RLTKENERLLEVQRRLENENDVLAKELVTTRSQLTAKLDRMVDERLAAQQALSRLKGVHE 694
Query: 57 ALASHYLKFYHSLSQNDQKMASLQLVQENTLLSEKIKIDR-LTEMKDETYLLEERQYDDE 115
A + L ++ L + E+ + R + E+K + ER E
Sbjct: 695 ASLQEGEETKTRLDTEVAQLKDLYRALSSEADEERSRSQREIEELKSLIRQVTERA---E 751
Query: 116 NNNDNIEQRILFNAVS 131
N+ Q++ S
Sbjct: 752 REVGNLRQKVATLEAS 767
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.310 0.133 0.328
Lambda K H
0.267 0.0406 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,951,386,472
Number of Sequences: 14124377
Number of extensions: 63286813
Number of successful extensions: 355247
Number of sequences better than 10.0: 501
Number of HSP's better than 10.0 without gapping: 91
Number of HSP's successfully gapped in prelim test: 574
Number of HSP's that attempted gapping in prelim test: 354540
Number of HSP's gapped (non-prelim): 1250
length of query: 137
length of database: 4,842,793,630
effective HSP length: 102
effective length of query: 35
effective length of database: 3,402,107,176
effective search space: 119073751160
effective search space used: 119073751160
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.3 bits)
S2: 75 (33.5 bits)