HHsearch alignment for GI: 254780511 and conserved domain: PRK06010
>PRK06010 fliQ flagellar biosynthesis protein FliQ; Reviewed.
Probab=95.35 E-value=0.16 Score=26.80 Aligned_cols=77 Identities=18% Similarity=0.154 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999999999999999999999999853325489999999999999999999999999999999950
Q gi|254780511|r 169 SSFVNMLQTTFMIMLRLSSPFLFFYIVFNISIGLLNKLVPQIPIYFISTPYLIGLGSLFLCLSIEIIVYQFSHSFLYG 246 (248)
Q Consensus 169 ~~~~~~~~~~f~~al~lA~P~i~~lll~~i~lgil~R~aPQlnvf~vg~piki~ig~~~l~l~l~~~~~~~~~~f~~~ 246 (248)
T Consensus 4 ~~vi~l~~~al~~~l~ls~P~L~valvVGl~Islf-QA~TQIqEqTLsFvPKliav~~~l~~~~pwm~~~l~~ft~~i 80 (88)
T PRK06010 4 ADALDVVRDAIWTVLIASGPAVLAAMVVGVAIALF-QALTQIQEMTLTFVPKIVAIFVTLLLTLPFMGAQISAFTLRI 80 (88)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999876999999999999999-999999998998799999999999998889999999999999