HHsearch alignment for GI: 254780511 and conserved domain: PRK12430
>PRK12430 type III secretion system protein; Provisional.
Probab=94.45 E-value=0.29 Score=25.36 Aligned_cols=69 Identities=23% Similarity=0.324 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999999999999999999999999999985332548999999999999999999999999999
Q gi|254780511|r 167 IFSSFVNMLQTTFMIMLRLSSPFLFFYIVFNISIGLLNKLVPQIPIYFISTPYLIGLGSLFLCLSIEIIVYQF 239 (248)
Q Consensus 167 ~~~~~~~~~~~~f~~al~lA~P~i~~lll~~i~lgil~R~aPQlnvf~vg~piki~ig~~~l~l~l~~~~~~~ 239 (248)
T Consensus 305 iPAFviSELktAFqIGFLIyLPFLVIDLVVASI--LMAMGMMMlpP~~ISLPFKLLL--FVlVDGW~Lli~sL 373 (379)
T PRK12430 305 LPSFITSELKTAFQIGFTIFIPFLIIDLVVASV--LMALGMMMVPPSTISLPFKLML--FVLVDGWQLLITSL 373 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCCCCCCHHHHHHHHHHHH--HHEECCHHHHHHHH
T ss_conf 978999999999999999999999999999999--9975053358046555367666--41337299999999