HHsearch alignment for GI: 254780511 and conserved domain: PRK12781

>PRK12781 fliQ flagellar biosynthesis protein FliQ; Reviewed.
Probab=95.55  E-value=0.14  Score=27.21  Aligned_cols=78  Identities=13%  Similarity=0.105  Sum_probs=68.8

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             9999999999999999999999999999999999998533254899999999999999999999999999999999504
Q gi|254780511|r  169 SSFVNMLQTTFMIMLRLSSPFLFFYIVFNISIGLLNKLVPQIPIYFISTPYLIGLGSLFLCLSIEIIVYQFSHSFLYGF  247 (248)
Q Consensus       169 ~~~~~~~~~~f~~al~lA~P~i~~lll~~i~lgil~R~aPQlnvf~vg~piki~ig~~~l~l~l~~~~~~~~~~f~~~f  247 (248)
T Consensus         4 ~~vi~l~r~al~~~l~~s~PiL~~aL~VGl~Isif-QA~TQIQE~TLsFVPKi~av~~~l~l~g~wm~~~l~~ft~~lf   81 (88)
T PRK12781          4 RDALELVRAAIWTIIVASGPAVGAAMLVGIAIALL-QALTQIQEVTLTFVPKIVVILIVMAVTGSFVGAQIYAFTEMVY   81 (88)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             89999999999999999774999999999999999-9999999999985998999999999987799999999999999