HHsearch alignment for GI: 254780511 and conserved domain: PRK12781
>PRK12781 fliQ flagellar biosynthesis protein FliQ; Reviewed.
Probab=95.55 E-value=0.14 Score=27.21 Aligned_cols=78 Identities=13% Similarity=0.105 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999999999999999999999999998533254899999999999999999999999999999999504
Q gi|254780511|r 169 SSFVNMLQTTFMIMLRLSSPFLFFYIVFNISIGLLNKLVPQIPIYFISTPYLIGLGSLFLCLSIEIIVYQFSHSFLYGF 247 (248)
Q Consensus 169 ~~~~~~~~~~f~~al~lA~P~i~~lll~~i~lgil~R~aPQlnvf~vg~piki~ig~~~l~l~l~~~~~~~~~~f~~~f 247 (248)
T Consensus 4 ~~vi~l~r~al~~~l~~s~PiL~~aL~VGl~Isif-QA~TQIQE~TLsFVPKi~av~~~l~l~g~wm~~~l~~ft~~lf 81 (88)
T PRK12781 4 RDALELVRAAIWTIIVASGPAVGAAMLVGIAIALL-QALTQIQEVTLTFVPKIVVILIVMAVTGSFVGAQIYAFTEMVY 81 (88)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999774999999999999999-9999999999985998999999999987799999999999999