HHsearch alignment for GI: 254780512 and conserved domain: PRK12720
>PRK12720 secretion system apparatus protein SsaV; Provisional.
Probab=100.00 E-value=0 Score=1869.89 Aligned_cols=660 Identities=29% Similarity=0.506 Sum_probs=616.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 00010013458999999999999603847899999999999999999999513770454200489999999998554888
Q gi|254780512|r 11 SNDRNHLHDFAFSFCIVLIICILFLPIPTVLLDVGLASSIALSILILMVALWIEKPLEFSSFPTVLLIVTIIRLSLNIAT 90 (692)
Q Consensus 11 ~~~~~~~~d~~~~~~~~~ii~~~iiPlP~~llD~~~~~ni~~s~lil~~~l~~~~pl~fs~FPslLL~~TlfRL~Lnias 90 (692)
T Consensus 8 ~~~~~~~~d~~~a~~~~~ii~mmiiPlP~~llD~~l~~ni~~s~~il~~~~~~~~pl~fs~FPslLL~~TlfRLaLnvss 87 (681)
T PRK12720 8 LSMCAGRQDIVLATMLLVAVFMMILPLPTWMVDILIAINLMFSVILLMIAIYLRDPLEFSVFPSLLLITTLYRLALTIST 87 (681)
T ss_pred HHHHCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 99852787544799999999998507978999999999999999999999865883121005599999999999887898
Q ss_pred HHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
Q ss_conf 88988437777632678999875145013269999999999999998864575146665545442037603454787876
Q gi|254780512|r 91 TRAILSFGHEGYGAAGGIIAGFSSLVMSGDFVIGLVVFMILITINFIVITKGATRIAEVGARFTLDAIPGKQMAIDADLS 170 (692)
Q Consensus 91 TRlIL~~g~~g~~~AG~vI~aFG~fVvggn~vvG~viF~Il~ivqfiVItkGa~RvaEV~ARFtLDamPGKQMaIDaDl~ 170 (692)
T Consensus 88 TRlIL~~g~-----AG~vI~aFG~FVvgGn~vVG~vvF~Il~ivqFiVITkGa~RvAEV~ARFtLDamPGKQMaIDADL~ 162 (681)
T PRK12720 88 SRLVLLQHD-----AGNIVDAFGKFVVGGNLTVGLIVFTIITIVQFIVITKGSERVAEVSARFSLDGMPGKQMSIDGDMR 162 (681)
T ss_pred HHHHHHCCC-----CCHHHHHHHHEEECCCEEEHHHHHHHHHHHHHEEEECCCHHHHHHHHHHEECCCCCCCHHHHHHHH
T ss_conf 999986477-----643999830016768455345897999776424880584067566554110568752021888987
Q ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 48999899999999998652222012201345301058999999999888999999973998899999989998645788
Q gi|254780512|r 171 SGLIEEEEAKRRRKELEEESAFFGAMDGASKFVRGDAIASIIITAINIVGGIVIGCFRYDMSIHHAADVFVRLSVGDGLV 250 (692)
Q Consensus 171 aG~I~~~eA~~rR~~l~~Es~fyGaMDGA~KFVkGDAiAgiiI~~iNiigG~~iG~~q~gm~~~eA~~~Yt~LTIGDGLV 250 (692)
T Consensus 163 aG~I~~~eAr~rR~~l~~Es~fyGaMDGAsKFVkGDAIAgiiI~~iNiiGGl~iG~~q~gm~~~eA~~~YtlLTIGDGLV 242 (681)
T PRK12720 163 AGVIDADEARRLRQHVQKESRLLGAMDGAMKFVKGDAIAGIIVILVNIIGGIIIGVMQHDMSASEAVNTYAVLSIGDGLC 242 (681)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHHHHHHHHCCEEEEEEECCCCHHHHHHHHHHHHCCHHHH
T ss_conf 69999899999999998764554105562031163289999999999854418998746987999998856431122488
Q ss_pred HHHHHHHHHHHHHHEEEECCCC--CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 8515899987331026623774--30589999987618648999999999986157864789999999999999988644
Q gi|254780512|r 251 SQVPALIISLSAAFLVSRTTSK--GSTNTAIVEQLSHYPRALLISAFFMIVLSVMPNLPAFPFIMLGGFFACAGFYVPYK 328 (692)
Q Consensus 251 sQIPaLliS~aaGiiVTRvss~--~~lg~~i~~Ql~~~p~aL~iaa~~l~~lglvPGmP~~~Fl~la~~l~~~a~~~~r~ 328 (692)
T Consensus 243 sQIPaLliS~aagiiVTRv~~~~~~~lg~~i~~Ql~~~p~al~i~a~il~~lglvPG~P~~~F~~la~~l~~~~~~~~r~ 322 (681)
T PRK12720 243 GQIPSLLISLTAGIIVTRVPGEKRQNLANELSSQIGRQPQSLILAAVVLMLFALIPGFPFITFATLAALVALPIILIRRK 322 (681)
T ss_pred HHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 77179999986650787047887444899999999609089999999999996268972789999999999999998744
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
Q ss_conf 32222100110002356676753001002460122101111123457552688999999999998098788324454377
Q gi|254780512|r 329 NELQRLAKVAQIQEASKQNQHSAQLNFITSGVELVLGSLVSNRLLSSQEDLFLRVSKIRRKFAVQYGFIVPEIKVTTDIS 408 (692)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~lg~li~l~~~~~~~~L~~rI~~iRk~la~elG~~iP~IrIrDn~~ 408 (692)
T Consensus 323 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~pl~l~l~~~------l~~~~L~~rI~~iRr~la~elG~vlP~IrIrDn~~ 395 (681)
T PRK12720 323 KRRVSADGVEAGGSEEG-APEKDSMVPGACPLILRLSPT------LHSADLIRDIDALRWFLFEDLGVPLPEVNIEVLPE 395 (681)
T ss_pred HHHCCCCCCCCCCCCCC-CCCCCCCCCCCCCEEEEECCC------CCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCC
T ss_conf 42013445445543335-764222476644079985555------56625899999999999997498867359985688
Q ss_pred CCCCEEEEEECCEEEEEEEECCCCEEEECCCCCCCCCCCCEEECCCCCCCEEECCHHHHHHHHHCCCEEECHHHHHHHHH
Q ss_conf 89871699974824534884178341330588876788741014766883034397884588828990705889999999
Q gi|254780512|r 409 LPEKGYTIRVYGTTVAISELRVGEVLVILGSGQKPTFPGDEVKEPAFGMPAFAIMESFSDDLRRQGFHPIDNLAVVLTHL 488 (692)
Q Consensus 409 L~~~~Y~I~I~Gv~va~gei~~~~lLai~~~~~~~~l~G~~~~eP~fgl~A~WI~~~~~~~a~~~G~tvvdp~~ViatHl 488 (692)
T Consensus 396 L~p~~Y~I~I~gv~V~~g~l~p~~lLai~~~~---~l~g~~~~ePafgl~a~WI~~~~~~~Ae~~GytvVdp~tViaTHL 472 (681)
T PRK12720 396 PTEKTLTVLLYQEPVLSLSLPPQAYLLIGADA---SVVGDSQTLPNGMGQICWLTKDMAHQAQGFGLDVFAGSQRISALL 472 (681)
T ss_pred CCCCEEEEEECCEEEEEEEECCCEEEEECCCC---CCCCCCCCCCCCCCCEEEECCCCHHHHHHCCCEEECHHHHHHHHH
T ss_conf 99987999984199888887688288757877---778865557888986489673208799978998987088999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 99999879998729999999999766648999986311599899999999999749865469999999987533579989
Q gi|254780512|r 489 SEVIRNNLSQLLSYKDVKNLISRLDPEYQKLAEETCSSHISYSGIQAVLKLLLAEHVSIRNLPLILESIAEVAPHSRKTS 568 (692)
Q Consensus 489 ~evir~~a~ellg~qEvq~LLd~L~~~~P~LV~Elvp~~v~l~~i~~VLq~LL~E~VsIRdlr~IlEaLad~a~~~kD~~ 568 (692)
T Consensus 473 ~evir~~a~eLLgrqEvq~LLD~L~~~~P~LVeEl-p~~l~l~~i~~VLq~LL~E~VsIRdl~tIlEtLad~a~~~kd~~ 551 (681)
T PRK12720 473 KCVLLRYMGEFIGVQETRYLMDAMEKRYGELVKEL-QRQLPIGKIAETLQRLVEERVSIRDLRLIFGTLIDWAPREKDVL 551 (681)
T ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCHH
T ss_conf 99999859998199999999999986678899756-16689899999999998758733228899999998722459999
Q ss_pred HHHHHHHHHHHHHHHHHHCC-CCEEEEEEECHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 99999999989998652077-88489998887899999998303777884645669889999999999999999956998
Q gi|254780512|r 569 HIVEQVRIRMAQQICGDLAP-TGILNILKLGNHWDMIFYQAIQRDSKGECVDFNVEPRAVEMFSENATNSIRQYIDKGIP 647 (692)
Q Consensus 569 ~LtE~VR~aL~R~I~~~~~~-~g~L~vi~L~p~lE~~l~~~i~~t~~G~~~~l~l~P~~~~~l~~~i~~~~~~~~~~g~~ 647 (692)
T Consensus 552 ~LtE~VR~aL~r~I~~~~~~~~~~L~VitL~p~lE~~l~~si~~~~~g~~--l~L~p~~~~~l~~~v~~~~~----~~~~ 625 (681)
T PRK12720 552 MLTEYVRIALRRHILRRLNPEGKWIPVLRIGEGIENLVRESIRQTAMGTY--SALSSRHKTQILQLIEQALA----ESQK 625 (681)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCCCCC--CCCCHHHHHHHHHHHHHHHH----CCCC
T ss_conf 99999999999999998558997369999688999999999751368876--68898999999999999997----0598
Q ss_pred EEEEECHHHHHHHHHHHHHHCCCCCEEEECCCCCCCEEEEEEEEC
Q ss_conf 799828335489999988644898189440178996579888609
Q gi|254780512|r 648 LTIVTLPEIRSYIRMILERNFPSLAVLSHMEIAKGLKVNILGTIS 692 (692)
Q Consensus 648 pVLl~s~~iRr~lr~lle~~~p~l~VLS~~EI~~~~~i~~iG~Is 692 (692)
T Consensus 626 ~VLlvs~~iRr~lr~lle~~~p~l~VLSy~EI~~~~~I~vvG~I~ 670 (681)
T PRK12720 626 LVLVTSVDVRRFLRKITERTLFDVPVLSWQELGEESLIQVVGSID 670 (681)
T ss_pred EEEECCHHHHHHHHHHHHHHCCCCEEECHHHCCCCCEEEEEEEEE
T ss_conf 699918656799999999768998697132159998268999999