BLAST/PSIBLAST alignment of GI: 254780512 and GI: 86356337 at iteration 1
>gi|86356337|ref|YP_468229.1| flagellar biosynthesis protein FlhA [Rhizobium etli CFN 42] Length = 695
>gi|86280439|gb|ABC89502.1| flagellar biosynthesis transmembrane protein [Rhizobium etli CFN 42] Length = 695
Score = 908 bits (2347), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/680 (65%), Positives = 569/680 (83%), Gaps = 4/680 (0%)
Query: 17 LHDFAFSFCIVLIICILFLPIPTVLLDVGLASSIALSILILMVALWIEKPLEFSSFPTVL 76
L D F+ I+ IICILFLPIP L+D+GLA SIA S+LILMVALWI+KPL+FSSFPT+L
Sbjct: 16 LRDIGFALGIIGIICILFLPIPPFLIDMGLAFSIAFSVLILMVALWIQKPLDFSSFPTIL 75
Query: 77 LIVTIIRLSLNIATTRAILSFGHEGYGAAGGIIAGFSSLVMSGDFVIGLVVFMILITINF 136
LI T+ RL+LNIATTR ILS G+EG+ AAGG+IAGF+SLVMSGDFVIGL+VF+ILITINF
Sbjct: 76 LIATMTRLALNIATTRVILSHGNEGHDAAGGVIAGFASLVMSGDFVIGLIVFLILITINF 135
Query: 137 IVITKGATRIAEVGARFTLDAIPGKQMAIDADLSSGLIEEEEAKRRRKELEEESAFFGAM 196
IVITKGATRIAEVGARFTLDAIPGKQM+IDADLS+G+I+E+EA+RRR+ELEEES+FFGAM
Sbjct: 136 IVITKGATRIAEVGARFTLDAIPGKQMSIDADLSAGIIDEKEAQRRRRELEEESSFFGAM 195
Query: 197 DGASKFVRGDAIASIIITAINIVGGIVIGCFRYDMSIHHAADVFVRLSVGDGLVSQVPAL 256
DGASKFVRGDA+A +IITAIN+ GGI+IG FR+ M I AADVFV+LSVGDGLVSQ+PAL
Sbjct: 196 DGASKFVRGDAVAGLIITAINVFGGIIIGYFRHGMPIGEAADVFVKLSVGDGLVSQMPAL 255
Query: 257 IISLSAAFLVSRTTSKGSTNTAIVEQLSHYPRALLISAFFMIVLSVMPNLPAFPFIMLGG 316
I+SL+A LVSR + GST+ A+V QLS YPRAL +SA M VL +MP LP PF +LGG
Sbjct: 256 IVSLAAGLLVSRGGTTGSTDQAVVNQLSGYPRALSVSAVLMFVLGLMPGLPTIPFTVLGG 315
Query: 317 FFACAGFYVPYK----NELQRLAKVAQIQEASKQNQHSAQLNFITSGVELVLGSLVSNRL 372
A +++P + N+L+R + ++ ++ + + S + TS +EL LG +VS RL
Sbjct: 316 LLAFGAWFIPRQVEAENKLRREQEEKKVVQSKELEKDSVKSVLRTSEIELALGKMVSTRL 375
Query: 373 LSSQEDLFLRVSKIRRKFAVQYGFIVPEIKVTTDISLPEKGYTIRVYGTTVAISELRVGE 432
L + ++L RV K+R+KFA QYGF+VPEIKVT DI++ EK Y IR++GTTVA + LRVGE
Sbjct: 376 LGAHQELAFRVGKMRKKFATQYGFVVPEIKVTDDIAIAEKSYQIRIHGTTVASNLLRVGE 435
Query: 433 VLVILGSGQKPTFPGDEVKEPAFGMPAFAIMESFSDDLRRQGFHPIDNLAVVLTHLSEVI 492
VLV+ G+G+KP+ PGDE++EPAFGMPA +I+E+F+DDL+R+GF PIDN++VVLTH+SEVI
Sbjct: 436 VLVVTGAGRKPSIPGDEIREPAFGMPAVSILENFADDLKREGFQPIDNVSVVLTHMSEVI 495
Query: 493 RNNLSQLLSYKDVKNLISRLDPEYQKLAEETCSSHISYSGIQAVLKLLLAEHVSIRNLPL 552
RNNL QLLSYKDVK LI RLDPEY+KLA+E CSSH+SYSG+QAVLKLLLAE VSIRNL L
Sbjct: 496 RNNLPQLLSYKDVKVLIDRLDPEYKKLADEICSSHMSYSGLQAVLKLLLAERVSIRNLHL 555
Query: 553 ILESIAEVAPHSRKTSHIVEQVRIRMAQQICGDLAPTGILNILKLGNHWDMIFYQAIQRD 612
ILE++AE+APH RKT IVE VRIRMAQQ+CGDLA G+L +L+LG+ WD+ F+QA++RD
Sbjct: 556 ILEAVAELAPHVRKTEQIVEHVRIRMAQQLCGDLADNGVLRVLRLGSKWDLAFHQALKRD 615
Query: 613 SKGECVDFNVEPRAVEMFSENATNSIRQYIDKGIPLTIVTLPEIRSYIRMILERNFPSLA 672
+KGE ++F+++PR++E FSE A+ IR+++D+G+P +VT PE RSY+RMI+ER F +L
Sbjct: 616 AKGEVIEFDIDPRSLEEFSEQASKVIREFMDRGLPFALVTSPETRSYVRMIIERLFATLP 675
Query: 673 VLSHMEIAKGLKVNILGTIS 692
VLSH+E+AKG+++ ILG+IS
Sbjct: 676 VLSHVELAKGIEIKILGSIS 695