RPSBLAST alignment for GI: 254780512 and conserved domain: PRK05910
>gnl|CDD|168293 PRK05910, PRK05910, type III secretion system protein; Validated. Length = 584
Score = 207 bits (529), Expect = 6e-54
Identities = 178/674 (26%), Positives = 288/674 (42%), Gaps = 114/674 (16%)
Query: 26 IVLI-ICILF---LPIPTVLLDVGLASSIALSILILMVALWIEKPLEFSSFPTVLLIVTI 81
+V I +CILF P+P LLD GL + ALS+ I+ + FP++ L + +
Sbjct: 12 MVAIPLCILFTLIFPLPQWLLDFGLCINFALSLSIVFWVFSLRSSASARLFPSLFLYLCL 71
Query: 82 IRLSLNIATTRAILSFGHEGYGAAGGIIAGFSSLVMSGDFVIGLVVFMILITINFIVITK 141
+RL LN+A+TR ILS G A +I + G L ++L +NF+VITK
Sbjct: 72 LRLGLNLASTRWILS-----SGWASPLIFSLGNFFSLGSLPAALTACLLLFLVNFLVITK 126
Query: 142 GATRIAEVGARFTLDAIPGKQMAIDADLSSGLIEEEEAKRRRKELEEESAFFGAMDGASK 201
G+ RIAEV ARF+L+A+PGKQM++DADL SG +++ L EES FF AM+G +
Sbjct: 127 GSERIAEVRARFSLEALPGKQMSLDADLVSGRASYSRVSKQKNSLLEESDFFSAMEGVFR 186
Query: 202 FVRGDAIASIIITAINIVGGIVIGCFRYDMSIHHAADVFVRLSVGDGLVSQVPALIISLS 261
FV+GDAI S I+ +NI+ +G + +A +GD LVSQVPAL+ S +
Sbjct: 187 FVKGDAIMSCILLGVNILAATFLGR-----ATGYAVGDLWLTVLGDALVSQVPALLTSCA 241
Query: 262 AAFLVSRTTSKGSTNTAIVEQLSHYPRALLISAFFMIVLSVMPNLPAFPFIMLGGFFACA 321
AA L+S+ K S +++ + A + L+ +P P P + F+
Sbjct: 242 AATLISKVGEKESLLQHLLDYYEQSRQHFRFIALLLCSLACIPGAPKAPILG----FSVL 297
Query: 322 GFYVPYKNELQRLAKVAQIQEASKQNQHSAQLNFITSGVELVLGSLVSNRLLSSQEDLFL 381
++ YKN + + L F E V +L + + + +L+
Sbjct: 298 -LFLAYKNP-------SSGET----------LLFQKERFEFVELAL-PDEGVGNPANLYR 338
Query: 382 RVSKIRRKFAVQYGFIVPEIKVTTDISLPEKGYTIRVYGTTVAISELRVGEVLVILGSGQ 441
R + + G + PE + E + G V + EL +L L +
Sbjct: 339 AA---REEIFQELGVVFPE---EIVVRHVESSPRLIFSGQEVYLRELSCPAILPSLRNLA 392
Query: 442 KPTFPGDEVKEPAFGMPAFAIMESFSDDLRRQGFHPIDNLAVVLTHLSEVIRNNLSQLLS 501
VK ++ + I+ ++ +SE N+L LL
Sbjct: 393 PEAISERFVK-------------RLVEEFQEVAGISIEE--IIPKKISE---NSLVFLL- 433
Query: 502 YKDVKNLISRLDPEYQKLAEETCSSHISYSGIQAVLKLLLAEHVSIRNLPLILESIAEVA 561
+ L E S H+ P ILE+IA
Sbjct: 434 ---------------RALVRERVSLHL---------------------FPKILEAIAVYG 457
Query: 562 PHSRKTSHIVEQVRIRMAQQICGDLAPTGILNILKLGNHWDMIFYQAIQRDSKGECVDFN 621
+ + +VE+VR + +QI L N D + + I DS E +
Sbjct: 458 SQGKSSEELVEKVRKYLGKQIG-----------RSLWNRQDTL--EVITIDSHVEQFIRD 504
Query: 622 VEPRAVEMFSENATNSIRQYIDK---GIPLTIVTLPEIRSYIRMILERNFPSLAVLSHME 678
++ +E ++ +++ G IVT E R ++ +++ FP L VLSH E
Sbjct: 505 SYSKSNPDMNEKVVAQVKSLLERSGEGNFRAIVTGCETRFELKKMVDPYFPDLLVLSHSE 564
Query: 679 IAKGLKVNILGTIS 692
+ + + +++LG +S
Sbjct: 565 LPEEIPISLLGAVS 578