RPSBLAST alignment for GI: 254780512 and conserved domain: PRK06012

>gnl|CDD|180350 PRK06012, flhA, flagellar biosynthesis protein FlhA; Validated. Length = 697
 Score =  880 bits (2277), Expect = 0.0
 Identities = 285/696 (40%), Positives = 433/696 (62%), Gaps = 6/696 (0%)

Query: 1   MIQSLIGISDSNDRNHLHDFAFSFCIVLIICILFLPIPTVLLDVGLASSIALSILILMVA 60
            + +++ +  +       D A +  ++ I+ ++ LP+P  LLD+ L  +IALS+LIL+VA
Sbjct: 2   NLAAMLRLPGNLKLLKWRDLAVAILVLAILAMMILPLPPFLLDLLLTFNIALSVLILLVA 61

Query: 61  LWIEKPLEFSSFPTVLLIVTIIRLSLNIATTRAILSFGHEGYGAAGGIIAGFSSLVMSGD 120
           L+I++PL+FS+FPT+LLI T++RL+LN+A+TR IL  GHEG  AAG +I  F   V+ G+
Sbjct: 62  LFIQRPLDFSAFPTLLLITTLLRLALNVASTRLILLEGHEGTDAAGKVIEAFGHFVVGGN 121

Query: 121 FVIGLVVFMILITINFIVITKGATRIAEVGARFTLDAIPGKQMAIDADLSSGLIEEEEAK 180
           FV+G+VVF+IL+ INF+VITKGA RIAEV ARFTLDA+PGKQMAIDADL++GLI+EEEAK
Sbjct: 122 FVVGIVVFIILVIINFVVITKGAGRIAEVAARFTLDAMPGKQMAIDADLNAGLIDEEEAK 181

Query: 181 RRRKELEEESAFFGAMDGASKFVRGDAIASIIITAINIVGGIVIGCFRYDMSIHHAADVF 240
           +RRKEL++E+ F+GAMDGASKFV+GDAIA I+IT INI+GG++IG  ++ MS   AA+ +
Sbjct: 182 KRRKELQQEADFYGAMDGASKFVKGDAIAGILITVINIIGGLIIGVVQHGMSFGEAAETY 241

Query: 241 VRLSVGDGLVSQVPALIISLSAAFLVSRTTSKGSTNTAIVEQLSHYPRALLISAFFMIVL 300
             L++GDGLVSQ+PAL+IS +A  +V+R +S G     IV QL   P+AL I+A  + +L
Sbjct: 242 TLLTIGDGLVSQIPALLISTAAGIIVTRVSSDGDVGEQIVGQLFANPKALYIAAGVLFLL 301

Query: 301 SVMPNLPAFPFIMLGGFFACAGFYVPYKNELQRLAKVAQIQEASKQNQHSAQLNFITSG- 359
            ++P +P  PF++L G      + +  + +        + +E           + +    
Sbjct: 302 GLVPGMPHLPFLLLAGLLGFLAYRLRKREKKAAELAAEEAEEEEAAEPEEESWDDVLPVD 361

Query: 360 -VELVLGSLVSNRLLSSQ-EDLFLRVSKIRRKFAVQYGFIVPEIKVTTDISLPEKGYTIR 417
            +EL +G  +   +  +Q  +L  R+  IR+K A + GF+VP +++  ++ LP   Y I+
Sbjct: 362 PLELEVGYGLIPLVDENQGGELLDRIRSIRKKIAQELGFLVPPVRIRDNLQLPPNEYRIK 421

Query: 418 VYGTTVAISELRVGEVLVILGSGQKPTFPGDEVKEPAFGMPAFAIMESFSDDLRRQGFHP 477
           + G  V   ELR G +L +   G     PG   KEPAFG+PA  I E+  +  +  G+  
Sbjct: 422 IKGVEVGSGELRPGRLLAMNPGGVDGELPGIPTKEPAFGLPAVWIDEALREQAQLLGYTV 481

Query: 478 IDNLAVVLTHLSEVIRNNLSQLLSYKDVKNLISRLDPEYQKLAEETCSSHISYSGIQAVL 537
           +D   VV THL+EVI+N+ ++LL  ++V+ L+ RL  EY KL EE     +S   +Q VL
Sbjct: 482 VDPSTVVATHLTEVIKNHAAELLGRQEVQQLLDRLAKEYPKLVEELVPKVLSLGTLQKVL 541

Query: 538 KLLLAEHVSIRNLPLILESIAEVAPHSRKTSHIVEQVRIRMAQQICGDLAP-TGILNILK 596
           + LL E VSIR+L  ILE++A+ AP ++    + E VR R+ +QI        G L ++ 
Sbjct: 542 QNLLKERVSIRDLRTILETLADYAPITKDPDELTEHVRQRLGRQIVQQYKGEDGELPVIT 601

Query: 597 LGNHWDMIFYQAIQRDSKGECVDFNVEPRAVEMFSENATNSIRQYIDKGIPLTIVTLPEI 656
           L    + +  Q++Q    G      +EP   E   ++   ++ +   KG P  ++  P +
Sbjct: 602 LDPELEQLLLQSLQGTGGGS--YLALEPGLAERLLQSLQEALERQEMKGEPPVLLVSPAL 659

Query: 657 RSYIRMILERNFPSLAVLSHMEIAKGLKVNILGTIS 692
           R Y+R +LER  P L VLS+ EI   +++ I+GT+ 
Sbjct: 660 RPYLRRLLERFLPQLPVLSYNEIPDNIEIRIVGTVG 695